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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065662 ID=TCONS_00065662|Name=TCONS_00065662|organism=Clytia hemisphaerica|type=transcript|length=899bp
gggaagaccatgtattgactgattggCTTGTTCGATTTCCAAAGGCTACT
TTTATTTGTCAAAGAAACTAGTAACGGAAAGAAAATGGTCTAATCAGTAT
TTGGTTCTttgcagaccggtctgtaaaatacacatcgACCCCTGTCGGAA
CTCAGGAACTACTGCAGTCTTTGAGCTAAGACTTGTGACAGACAATCTAA
GACAGTGTGCTAAATTTCAATTTGGTCAAGATCACAGATCAGTCCGTAAA
ATAACAtgaaatgctcactttcagcataaccACTTATCTGATTGTGCTGA
ATTTTTGGCTGTAAGCCTACACACTCACTTGTAaagatttcaagtcaata
gcattttccAATCCTTAGACACAGTAAACTAGGGTTGATCTAGGCAAAAG
GCCATTTCtggccggtctgtaaaatacgcGAATACCAGTAGGTAGCGAAA
AATTGATCCTATAACCCAAAAATATTACATGGAGCTGGCccacaaaattt
gagcaaaatttatgggcggTTCCAATATCGGCATTTTCATAAATGTTAAC
GTCATCAGGTGGTGACCCAtttactaaaatttgaaaacgaacTTCCGTAT
TAGACCCCTAGGCAgaatacaaaaaataattttattcaaaagttcaaatt
tttggaagattttttgtTACTGTCGAAAAATGAAGTTTCCGACGGACGAA
GGGAGTTGGAAACGGATTTCCTTACGGTTTGGGAACGAGTTTGTCATGTG
TAGCGTGTGTaaataaaaatggtagcatTTTTNNNNNNNNNNNNNNNTTC
ACGCCAGCCAAAGACCAAATGCTCAGAGAAAACAAATATGTGTATTTCAA
TGTGTTTTGAACCCTTTGAGTAAGATAAGTAGGAGTGGAAAATAGGAAG Run BLAST on NCBI transcript from alignment at scaffold_441:36603..37501 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065662 ID=TCONS_00065662|Name=TCONS_00065662|organism=Clytia hemisphaerica|type=transcript|length=899bp|location=Sequence derived from alignment at scaffold_441:36603..37501 (Clytia hemisphaerica)
CTTCCTATTTTCCACTCCTACTTATCTTACTCAAAGGGTTCAAAACACAT
TGAAATACACATATTTGTTTTCTCTGAGCATTTGGTCTTTGGCTGGCGTG
AANNNNNNNNNNNNNNNAAAAatgctaccatttttatttACACACGCTAC
ACATGACAAACTCGTTCCCAAACCGTAAGGAAATCCGTTTCCAACTCCCT
TCGTCCGTCGGAAACTTCATTTTTCGACAGTAacaaaaaatcttccaaaa
atttgaacttttgaataaaattattttttgtattcTGCCTAGGGGTCTAA
TACGGAAgttcgttttcaaattttagtaaaTGGGTCACCACCTGATGACG
TTAACATTTATGAAAATGCCGATATTGGAAccgcccataaattttgctca
aattttgtggGCCAGCTCCATGTAATATTTTTGGGTTATAGGATCAATTT
TTCGCTACCTACTGGTATTCgcgtattttacagaccggccaGAAATGGCC
TTTTGCCTAGATCAACCCTAGTTTACTGTGTCTAAGGATTggaaaatgct
attgacttgaaatcttTACAAGTGAGTGTGTAGGCTTACAGCCAAAAATT
CAGCACAATCAGATAAGTggttatgctgaaagtgagcatttcaTGTTATT
TTACGGACTGATCTGTGATCTTGACCAAATTGAAATTTAGCACACTGTCT
TAGATTGTCTGTCACAAGTCTTAGCTCAAAGACTGCAGTAGTTCCTGAGT
TCCGACAGGGGTcgatgtgtattttacagaccggtctgcaaAGAACCAAA
TACTGATTAGACCATTTTCTTTCCGTTACTAGTTTCTTTGACAAATAAAA
GTAGCCTTTGGAAATCGAACAAGccaatcagtcaatacatggtcttccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065662-exon-scaffold_441-1491911889:36603..37501 | TCONS_00065662-exon-scaffold_441-1491911889:36603..37501 | Clytia hemisphaerica | exon |
| TCONS_00065662-exon-scaffold_441-1510915933:36603..37501 | TCONS_00065662-exon-scaffold_441-1510915933:36603..37501 | Clytia hemisphaerica | exon |
| TCONS_00065662-exon-scaffold_441-1575043694:36603..37501 | TCONS_00065662-exon-scaffold_441-1575043694:36603..37501 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_441 | supercontig | scaffold_441:36603..37501 . |
Blast
The following BLAST results are available for this feature:
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