TCONS_00065757 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065757
Unique NameTCONS_00065757
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2552

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065757 ID=TCONS_00065757|Name=TCONS_00065757|organism=Clytia hemisphaerica|type=transcript|length=2552bp
AGTAATATGCGATAGAACAATAATACCAGAATGTAGGCTTGAATTAAAGA
TTTTagtttgaataaaaattaatgGTGGAGTCGATCATAGCAATATGGCA
GGATaatgaaaatataaagaatAAACCAAGGAGTTGAAGACTCCTATCTG
AGACTTGAACAAAGATGGGTGCAGCGAATTCCAGAGATAGGCGGTCATCA
TCAGGACCACTAATCACATTATCCTGTCCTGAATGTTCTGAAAGGTTTGG
TAACGAACTTGCCCTTGTTCAACATTACAATCAAACACATCCAAACATTC
CTCACAACGAAAGTGCTAGCAACAATTCAAACCCTCATAAATTCAACGTT
GGAGATCGTGTTTTGGCAATGTGGGAAAgtgcaaaatggcaatatttCCC
AGCAACTATTGCGAGAGAAATTGACGATCgattaaaatatgaaattgatt
GGGACGATGGTGATACGACAGGCCGAGTAGTCGACTCCTCTAATATTTAT
CAAAACACTCCGGTCAATCCTCAAGACGTTCAAGCTGGAACAAAAGTGTT
ATTCAAGCAAGGTTCATATGGGGCAGGTGGATGTCAGTTGACAGGTGGTG
ACAGGTGGCACGAAGGAATCATAACAGAAGCTCATAGACTTCCAGGAGGT
ATCTATCGATTTAGTGGGCATCACACCAAAGGAGCCAATGATGGAAAGAG
TTTAGGATACCACGGATATAACCACAATTTCAAGAACTATACTATAGATT
CACTACGACTTTCCACCAGTAATTCAAATGTTACAGGAAATGATTTATTA
ACGAATAGGACTTCTGCCTTGCAGAATAATAGTTCCAATACCTCATCAGG
AGGTGCTTTCGAAGTTGGAGATCGCGTTTTGGCAATGTGGGGATTGAACA
AATGGCAATATTTCCCAGCAACCAttgcaagagaaattgaagatggattg
aaatatgaaattgaTTGGGACGATGGCGATACGACAGGGCGCATCGTTAA
TGTTTGTAACATTTACCGTGATATCAAACCAAATTCATCAAACATTGAGA
TCGGATCCAAAGTCCTTTTCAGTCAAGGCTCATATAGGGCGGGTGACACA
CAAACCAGTGGCGGTAAACGATGGCATGAGGGCGTTGTGACATCAATAAA
TAGTGTAGGTGGGCGTCTCCAACTTAGCGGTCACCATACTAAGGGCGTAG
CTGATGGAAAGTCGACCTCTTATGGAGGATATGTTTATAATTTCACCAAT
TATGCTGTTGACTCTCTACGACTATCAGGTTCATCCACACATGCCACAGC
TACGAACAATCATACACATAGTCAAGGTACAATAAACAATGCTAACATCA
ATAGGACTTTCAACACCGGTGATGGTGTCTTAGCCATGTGGAGTTTGGAA
ATGTGGCAATATTTCCGAGCAACCATAGTCAGAAAAATACCAGGAAAAAA
TCAATATGAAATCAACTGGGATGATGGTGATACGACAGGTCGAATCGTTG
ACTCTTTCAATATTTATCTCAACGCAAATCAACCGGGCGAAGTGATTACA
GAAGGGAGTAAAGTACTTTTCCAACAAGGAGCTTACTCAGCTGGTTCTAC
TCAACAATCGGGTGGTAATAGGTGGCATGAGGGCGTGATCACGAATGTGC
ATACCCTACCAGGTGGCGTGTACCGATACACTGGTCATCATACTAAAAGT
GCCAACGACGGTAAATGGATCGACTATGTCGGTTATCAATACAAGTTTGA
ACGAGTATCAGGCTCTGAGTTACGACTTTTTGATAATACATCTTCCAGCA
ATGTTTCGAACCACTCAATGGTATCTTTACAACCGTCCATAGCTCCAAGA
AAACATGTTGATTTAGACACGAAGTTTTACCTGGAAGTTGGTGATCGTGT
GTTAGCAGAGTATAAAAGGAATGGGAAATTCTACTCAGCTACCATTTgtg
aaattctttcaaattcaaaatacatGGTAAACTGGTTTGACGGAGATGTG
AATGGTCGCGAGGTCAGGCATATCGAACTCAACTTAGACTCGATTCCAAA
GCCTGATGAACTATCAAAAGACACCATTATATTTTTCCAAGATGAAGAAC
TATGGCACCCAGGGTTGATCACAAACATTTATAACGGTATTGACGGGACC
TCTTTGTACGATGTTGGAACACTCCACGGTGCAAAATCTTATGAGGGACT
ACCGATAGATAAATtatcatcaaaaattgaagtgACAGACACAGGATTCT
TGATGACACCAACAACGTCTTTACCGCCTGTTAATCCCCAGATGGCAAAT
AACAGGTTGAACGTTGGTGATAGAGTTCTTGCGATGTGGATTAAAACAAA
ATGGCAATATTTTCCAGCTACCATCAGAAAAGTCCTTCCGAATTTACAAT
ACAAAATAGAATGGGATGACCAAGATTCAACAGGTTTGATTGTGGATTGT
TTCAACCTTGCAAAAGATGTGATCCCAGAAGCGCAGTGGATTGGTGTAGG
GTCGATCGTTCTTTTTCAGCAAGGAGGTTACAGTGGTAACAATGACTTAG
GT
Run BLAST on NCBI

protein sequence of TCONS_00065757-protein

>TCONS_00065757-protein ID=TCONS_00065757-protein|Name=TCONS_00065757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=796bp
MGAANSRDRRSSSGPLITLSCPECSERFGNELALVQHYNQTHPNIPHNES
ASNNSNPHKFNVGDRVLAMWESAKWQYFPATIAREIDDRLKYEIDWDDGD
TTGRVVDSSNIYQNTPVNPQDVQAGTKVLFKQGSYGAGGCQLTGGDRWHE
GIITEAHRLPGGIYRFSGHHTKGANDGKSLGYHGYNHNFKNYTIDSLRLS
TSNSNVTGNDLLTNRTSALQNNSSNTSSGGAFEVGDRVLAMWGLNKWQYF
PATIAREIEDGLKYEIDWDDGDTTGRIVNVCNIYRDIKPNSSNIEIGSKV
LFSQGSYRAGDTQTSGGKRWHEGVVTSINSVGGRLQLSGHHTKGVADGKS
TSYGGYVYNFTNYAVDSLRLSGSSTHATATNNHTHSQGTINNANINRTFN
TGDGVLAMWSLEMWQYFRATIVRKIPGKNQYEINWDDGDTTGRIVDSFNI
YLNANQPGEVITEGSKVLFQQGAYSAGSTQQSGGNRWHEGVITNVHTLPG
GVYRYTGHHTKSANDGKWIDYVGYQYKFERVSGSELRLFDNTSSSNVSNH
SMVSLQPSIAPRKHVDLDTKFYLEVGDRVLAEYKRNGKFYSATICEILSN
SKYMVNWFDGDVNGREVRHIELNLDSIPKPDELSKDTIIFFQDEELWHPG
LITNIYNGIDGTSLYDVGTLHGAKSYEGLPIDKLSSKIEVTDTGFLMTPT
TSLPPVNPQMANNRLNVGDRVLAMWIKTKWQYFPATIRKVLPNLQYKIEW
DDQDSTGLIVDCFNLAKDVIPEAQWIGVGSIVLFQQGGYSGNNDLG
Run BLAST on NCBI

transcript from alignment at scaffold_444:58739..72900-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065757 ID=TCONS_00065757|Name=TCONS_00065757|organism=Clytia hemisphaerica|type=transcript|length=14162bp|location=Sequence derived from alignment at scaffold_444:58739..72900- (Clytia hemisphaerica)
AGTAATATGCGATAGAACAATAATACCAGAATGTAGGCTTGAATTAAAGA TTTTAGTTTGAATAAAAATTAATGGTGGAGTCGATCATAGCAATATGGCA GGATAATGAAAATATAAAGAATAAACCAAGGAGTTGAAGACTCCTATCTG AGACTTGAACAAAGATGGGTGCAGCGAATTCCAGAGATAGGCGGTCATCA TCAGGACCACTAATCACATTATCCTGTCCTGAATGTTCTGAAAGGTTTGG TAACGAACTTGCCCTTGTTCAACATTACAATCAAACACATCCAAACATTC CTCACAACGAAAGTGCTAGCAACAATTCAAACCCTCATAAATTCAACGTT GGAGATCGTGTTTTGGCAATGTGGGAAAGTGCAAAATGGCAATATTTCCC AGCAACTATTGCGAGAGAAATTGACGATCGATTAAAATATGAAATTGATT GGGACGATGGTGATACGACAGGTATGCTTTGAATTTGATCTAGAAACTTC GTTTGTATCACACCCCTATTTCCGTGGGATATCTTTAATACAGTTTGCAA GGTTGTGGGTTCAACTCCCAGTCCCGCCATACCAAAGATTATCAAAATGG TACGTGATGCCTCTCTGCTTGATGCTTAGCAATTTAGAGAAGGATCAAGG GTAAGTGAAGCAATCCAGGGAGAAAGAGAGGAGCTTTCGGGTCGCCTCCG AACGCGGTTGCGGACTCATTTACGTACAGTTGACAGCCCAAAATTTACAT TCCACTATTTGATAAGCTCCCTTTTTCGATATAAATCCAATTCCCTTTGA AAATCGAATTAGAGAGCGTTATATGTCTGATCGAGTAATCTTTGAACACA AAAACATGCACGTGTTTTTATAAGAACATCCAAACTTTGTGAAGCCTTCA GATGTTCTTAACTTTTTGAATTTTGAGCCTAAAATGTTCTTAAGACGCGT TCTTATTGTCACTATTTTGTGAGTATTTTTGTCCATTTTCCTAAAAAAAT AGGTGTTTTACCATACCATATCACAAAGCCTTAGAATGTTTTTAAGTTGT TCTCAATATTTTAGCCATCGAAGCCATATGTTTTTATGTAGATTGTTCTT ATAAAAAAATATCATAATTAAAATAATTATAACGCTAAGTGTGAAAATAG CCCTAGTAATCTCTAGGGCTCAAATAAGTATGCTTATTATTAAGTTTTCA TCGGCGCGACCCCAGTGTCATTAGCAAAAACTGATTAATGATACAGGGGT GTACTAATAACCCACTAAAAATCATTAACCGCTTCCCTTTCAAAATATAA AAGGAATCAAATCTTCTGAATCTTTAGGCCGAGTAGTCGACTCCTCTAAT ATTTATCAAAACACTCCGGTCAATCCTCAAGACGTTCAAGCTGGAACAAA AGTGTTATTCAAGCAAGGTTCATATGGGGCAGGTGGATGTCAGTTGACAG GTGGTGACAGGTGGCACGAAGGAATCATAACAGAAGCTCATAGACTTCCA GGAGGTATCTATCGATTTAGTGGGCATCACACCAAAGGAGCCAATGATGG AAAGAGTTTAGGATACCACGGATATAACCACAATTTCAAGAACTATACTA TAGATTCACTACGACTTTCCACCAGTAATTCAAATGTTACAGGAAATGAT TTATTAACGAATAGGACTTCTGCCTTGCAGAATAATAGTTCCAATACCTC ATCAGGAGGTGCTTTCGAAGTTGGAGATCGCGTTTTGGCAATGTGGGGAT TGAACAAATGGCAATATTTCCCAGCAACCATTGCAAGAGAAATTGAAGAT GGATTGAAATATGAAATTGATTGGGACGATGGCGATACGACAGGTTAGTA ATGTTTTCTCTTTTCATTCTCTAAAGTTTTGGATACAAAATTATTATCCT CTTCTTTTTTAGTAATTTGTGCCCTGTATAAATTACACCCCTGTTTCAGT GACCTGGATAAATTTTGAAATGCATCGGGGTGACTATGAAAAAAAAGGTA TGAAAAGAAATTTCACCGGGTCTGAATATCAGATCTCGTGCTTTTGAGTA CGAANTATTGTTTCATTTGATGATTTTAACGAGGCGGCAACGAAGCTAGC AGTGTTATCTTCAAAAATACAAAGGAGATGGATGTCCAGTCGTTTATATG TTCATGGAATATCAGATCTCAAAAACTGGCTTTTAAATACGAAGCATTGT TATGAGCCCCCTCCCCCAACGGACCTTCAATTCGAGCAATCACGCATTAT TTTTGTTTTCACGTTTTCATGCAAGTGAAAAAGCCCATTCACGAATTCAC GCAAACCACTGGGGAGGCTGTCTTTATATTCCAGGGACCATGCTCCCTAG CGACTGCCTCGCAATCCATCAATCTGGACGGTGGACGATGATTTCTCTTT GATTGCTGAGCGTCAAGCGTAAGGCACCAAGTAACATTTTGTACTTCGTA CGAAGTCTTTGTAGATTCTCAAGAATTGAATCACGGCCTTGTCCACCGTA ACTGGACGCTCTATCTTTACGCTACGGTCGCAATAATTTTCTAACAAGCT CTACACGTTCTGTTTTTTAGGGCGCATCGTTAATGTTTGTAACATTTACC GTGATATCAAACCAAATTCATCAAACATTGAGATCGGATCCAAAGTCCTT TTCAGTCAAGGCTCATATAGGGCGGGTGACACACAAACCAGTGGCGGTAA ACGATGGCATGAGGGCGTTGTGACATCAATAAATAGTGTAGGTGGGCGTC TCCAACTTAGCGGTCACCATACTAAGGGCGTAGCTGATGGAAAGTCGACC TCTTATGGAGGATATGTTTATAATTTCACCAATTATGCTGTTGACTCTCT ACGACTATCAGGTTCATCCACACATGCCACAGCTACGAACAATCATACAC ATAGTCAAGGTACAATAAACAATGCTAACATCAATAGGACTTTCAACACC GGTGATGGTGTCTTAGCCATGTGGAGTTTGGAAATGTGGCAATATTTCCG AGCAACCATAGTCAGAAAAATACCAGGAAAAAATCAATATGAAATCAACT GGGATGATGGTGATACGACAGGTTTGTGAATTTCGTTTAAGAATTTCGCT TTCAGGTGTGCTCAAAAATCCAGAAGGTTAATCTCAAGGTAAGATAAATT TCTATGGAAAGGAAACGCTGATGCACAACGTTTAAAGGTTAAAGTATGAT TTGGTATCATACCTAAACTTTTCCTATCTCTAAGAAATTAATCTCTCTTC TTTGCACTTGTACATAACAATGTTATGGAAAGTCATAACATTTACTTAAA ATAGTACATAATTAGTAAAAGAACTTGAGGAACTGTCCTGGACTTTTGTC TTTGGGTAGCAGTATCTTTCGTCCTTAGAGGGTTGAAAACAAGTACCAAG GGAAGCATATTTTCACCCCAAAATCATTTAAATGAGAAGGCAAGAAAGCA ATCGCAGTTTTATTCAATTTTAGGTCGAATCGTTGACTCTTTCAATATTT ATCTCAACGCAAATCAACCGGGCGAAGTGATTACAGAAGGGAGTAAAGTA CTTTTCCAACAAGGAGCTTACTCAGCTGGTTCTACTCAACAATCGGGTGG TAATAGGTGGCATGAGGGCGTGATCACGAATGTGCATACCCTACCAGGTG GCGTGTACCGATACACTGGTCATCATACTAAAAGTGCCAACGACGGTAAA TGGATCGACTATGTCGGTTATCAATACAAGTTTGAACGAGTATCAGGCTC TGAGTTACGACTTTTTGATAATACATCTTCCAGCAATGTTTCGAACCACT CAATGGTATCTTTACAACCGTCCATAGCTCCAAGAAAACATGTTGATTTA GACACGAAGTTTTACCTGGAAGTTGGTGATCGTGTGTTAGCAGAGTATAA AAGGAATGGGAAATTCTACTCAGCTACCATTTGTGAAATTCTTTCAAATT CAAAATACATGGTAAACTGGTTTGACGGAGATGTGAATGGTGAGTTTCCT CGAAAACTGAGCTTCCTAGTCATTTGGTTCTCTTCCTTTGCAAAAAGAAA ATATAACTTTCCTGGTAGAAGATTCCATAGAAATCCCAAATGGGGAACAA AATCCTTTTCGTTTAAGTTTAAAAATGCCAATAGGGATGGACTACGAGTA CAATTTTTTCCATTCAGTAGTTATAAATGGGGATAAAATTACAGTGTAAT TTCCCAGTTCAGTTTAAACTTAAACTATTTTTTACACGATCTTTTGGCAG ATATGGAAGCAAGGGCTCCGGGTCTATAACACAGGGGTGTGAGAATCTAC GCTTTTAAATGAACTAAGCTCTACTAATGACCTACAAGAAGTCCAAGGCA GTGGAGGTAAAAAAAAGACCTACTCCTTATAAGTAGAAAGAGTATAATTG ACGTCAAATGTTGTCTAAACCGTAATGAACCAGATAGAATTTTTAGCTTT GTTTATTTATGTTTCTGAGCACACAGAACCTGTCGTAATATATTTTTTTG CTCAAAACATAAACAATCTATTCGTTGAGATTTATCATTTCCTTTGAAAT CAACTTTTCTGAACAGTTGTTAATTTTGGGATTAGTAGTATTATGCCTCT AACGTCACTCTTTTCATAGGCGGTTTTAGACCATGTCGAACTTATCAGAA GAAGAGATTTGTAATTGCAATTTCATTGTCAATTAACGAGCGTTGCTCTC CTTTGCATGTTTCCGACGTACTTACTCTCCCTATTGTCTTAAATCCGCCA GTGCTTTTGGCCCTGAAAAGTTTTGCTTGGCCTAATTCGCAAAAAGTGAT GATGACTGCTAAAGAAGCTTATACTTCTTTTTAGGTCGCGAGGTCAGGCA TATCGAACTCAACTTAGACTCGATTCCAAAGCCTGATGAACTATCAAAAG ACACCATTATATTTTTCCAAGATGAAGAACTATGGCACCCAGGGTTGATC ACAAACATTTATAACGGTATTGACGGGACCTCTTTGTACGATGTTGGAAC ACTCCACGGTGCAAAATCTTATGAGGGACTACCGATAGATAAATTATCAT CAAAAATTGAAGTGACAGACACAGGATTCTTGATGACACCAACAACGTCT TTACCGCCTGTTAATCCCCAGGTTTGATTTAGCTTCAGAAAAACTTTGAG TTTTTTGGTTTATTGTAGTTCATTCTCTTTACTCAAAGATCTACGGTGGC TTGTTTCTGCCTTTAATCGCGTTGTTGTTAGCCTTACAAAATGCATGCAA ATAAGTAGGCTACAAAATTCTATTGTTAACAGAGCTACACGTCGGACATG TTAACTTGATAACATATCCGAATTTTTATCTTGTCAAATTAGTTTATCAT GATAACTGGCAAGTTATTATCGTGACATTCACGATGACACATTTTCAGGA AAAAATGATGCCAAAAAAAAAATTATTTGATCAGGTTTGTCATTCAGCAA AACGGGTAAATATTATATCTAAACATTTTTTTCTGACAAGTTAAGCTTAT GCTCCTCAGTCAAATATCTTAAATTCTTTTCAACAAGTTAAGCGTATGCT TTTCAGGCAAATTAATTAATTAAGTTAATTGCCCGAAACGCCCAAGCTTA ACTGGGTGATTTCATCATGTCCAAAATGTCAAGTTATTTGCCCGAAAAGC TCAAGCTTAATTGGGTACCCTGAGTATCAGAGCTTAAGTTTTCCAAGAAT ATTTTAACCTCTGAAGACCAATAATAGAAATTTTATCGCGCATGTGTCAA TCTAATCTCTGTAGAAAGAATCAAAGATGAAGAGCAGATATTACCTTATT AATGTCTAGCAGACTGTATCAGTGTGCAGTTTACTATTTACGAATTCCCC AGAAACCTCCAAGTGTAATCGAAGTGAGTTTCTTTCGAAAGAAATCTTTT ACATGATCCCCAAATGTATAACAGTAATTACTAAGCTATTAATTATGGAA ATGTCACTTTTAATTGAACCGAAATAATAGACAGACTTTATGTTATGATT CTCTATCACTGACTCTTTTTAAAAAGCATTGATGATATTTTTTAGTTGTG TGTTTCAACGACGGGAATAAAAATATCAACTTTGAACTTCATCCAAGATC TTGGATGGTCGTCATGGTTACTTTTGTCTTCGTTGATTGCGCGATGAATA GAATCTCGATTCGTCGGCACAGCGTCAATATATGATTTTGACCTGTGCTT TTCACGGTATTAATTGGGTGATTTTCTAAAAAGTCAATATTTTTATTCTA CCGTATTATTTTTTAAGTACAACAAGAAATTTACACATCGTAACACGACT TCTAACAAGGTTATTTTTATCTTGCTTTTTTCAAAAAATATTTAATAAAA TTTGATTTTTTTCACACTGTTAACTATCATGATAAATATCAGCGCGATTT TGTGGCAGAAACAAGCCACGGTAAAGATCTACTTCCGATAGGTCTTTTCA TTAGTAATTTTGAGTGCGACGGCTACCTCTTCCCAGCGGGCGCACAACGT CGTTTCAACGTTTTTATTATATTCACAACATCCATATAACGTTAGATAAA CGTTGTGAAACAATGTGGTGTGTTAGCTGGGTTTTGTCTTTTTGAAACTA TCACCAGGGTTGATAAATCACTTGAGTCTTCCAGTGTTGCTTTCAAATAA TGTAAGCTTCTCAAATAAACTCCTCTGGGAATCAATTACCATAGTAACAA TTTGAAACAGAGGAAAGCGTTGCTCGTGACGTAATTTATGGAAAGGTAAA GAGGAAGCACCAATGAAGTATAAGCCGGAAAAGCTAAAATCGAATCTACT TAGTAGGATTCGAAGCCAACAAATCCTACCAAAGTTGCGCGACCTAGCGC GGTCCACCTTGTTTTTTTACACAAATAGCAGATTGAAACTGAAATTTACA CCCAAATTTCGAAAAAGATATCACTCGAAAACAAAGGAACCCGTCATCAA AAATACAGCGCATTTTATGGCTTCACTTTTTCTTGCTTGAGAAAGGTTAA AGATTTGATTCTAGCTCTTCGGGCTTATACTTCTTTGGAAGGTACCACTC TAAGACTTCCTATAGAAGTATAATTGTACTGCTTTAATCATCAACAGTAG TTGACTAAACCCGGGGGAATCATGGCAATTAATAAGCGTAAGATATTTGC TAAGGTCTTGTTTACATGTGGACTTTTTTCTGTTGTAATAGATGGCAAAT AACAGGTTGAACGTTGGTGATAGAGTTCTTGCGATGTGGATTAAAACAAA ATGGCAATATTTTCCAGCTACCATCAGAAAAGTCCTTCCGAATTTACAAT ACAAAATAGAATGGGATGACCAAGATTCAACAGGTTGGTATACGTATATT AATATTTTAGGATTGTTTATACGCCTTTTTTATAAGAACAAACTATATAA GAACATAAGGCTTCGATGGCCAAAAAAAAAGAAAAAAAAAATCTGTATTT TTCCACCTAAACTAGAGCTTTTTTCCACACTTCAACATCGATTCCTGATG GATGAGGACGCATCAGCTGACATTTCCATAGAAGACCATCCCAGTCAAAA TTTCGACGATCTCCGATGCTCCGAAGCGAAATGTTACGGTTTCGAAGAAA ACATCTTAGTATGTATGGCATGTGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNATCCATGAGAAAATCACCGAACT TGGTGCAACCATGAAGGCGTCAATTATTGATGAAATCAAAGCGACACTCT TGAGTGTTGAAAACCAGATGGCTGAGGTATGCTGATGTGGTGAAAGACCC TTCACAGGATGAGTCTAATACTTCGATCAAAGAGGTGATTAAAGAAGCTC TGCGGGAAGAAGAAGCCGAGGAAACGAACAAACAGAAGCGTGCTTCAAAC ATTATTGTTCATGGAGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TTACTGATGAGCCTGAGGGTGAATTGCCAGATTTCCCTGCACAAACAGAT AAGAAGATTAGTGATCTATTCGTCACCGAGGAGATGATGAAGAAACAGAT AAAACTGATTGACACCAACAAATCCTTTGGTCCAGATGAAATTCATCCCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNCCAAAATGTTGGTAGAATTGGTCGAC CACGTAGCCGAGCCTTTGGCGATCATAATGAATAAAACCTTGTCGTGTGG AATCATACCGAAAGAATGGAAGATGGCCTACGTTTCGCCAATTTACAAGA ACAAGGGTGCTCAAAATCTAGCAATAAACTATAGACCAGTCAGCCTGACA TCAGTTGTTTGTAAACTGATGGAATCATTTCTTAGGAGGCATATCATGAA TCATCTACAAGATCAAAAACTATTGTCAAATAAACAATACGGCTTCATCA GTCACCGATCAACAGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNGCATATCGGCGTGGAACCAGCTCCC AAAAAATGTTGTTAATGCTAAGTCAATCAAAGCATTTAAAGAAGAACTGA CTCAGGCATGGATAAAGCACCCGTTACGATTCAAGATCACTTTTGTAATC ATTATGTAGATAGACCGGTTTAGAGGCCCTAGTGTGCCTGGACTGTAAAT CCTTTAATAAAATAAATAAAATATTAAGAACGGGGTAAGAACATTTTAAG GCTTTACGGACTCTAACACACCCGATTTTCTAGAAAGACTGGCCAAAATC GCTCAAAAAATGGTCGAAATAAGAACATGTTGAGAACATGTTAATAATGA TGAGTCAAAACTTTTTTTTAAATGTAGAACTTAAAGTTTCATGCTTACAA TCATCAGCTACATATGATACAAGTTTGATCTAATTGAAAAAAATTCAAAA TTCAAACACCGCTAGAATCGACAAGTCGTANGAGTCAAAACTTTTTTTAA AATGTAGAACTTAAAGTTTCATGCTTACAATCATCAGCTACATATGATAC AAGTTTGATCTAATTGAAAAAAATTCAAAATTCAAACACCGCTAGAATCG ACAAGTCATAAAAATTAATGAGTAATTAGAAAAAATAAAATTATAATTCC CATGTGAGCAGCTATGTCCAGTCTTTTGTTTTATAATGTTTGAACATAAA CTTATTAATGTGACGACATTTAGAAACAATTTCGGATCTTTTGTTAAGCA ATTCGTCTTTGTTTTCGAATCTCAGGATTTCTAATTTTTCTTGTAAACAA AGGCGGCACATTTTGGAAGTGTTAGAGTAGGATTTGACCCGTTTTTGGAT AGACCATTTTAACGTCGGGGCAATATTCTTTTTTTTTAAGGCCCAAATAT ACGTAGACAGGGTTGTGCTGTTTTTGTACTTAGCGTTGTTGATAGATTGC TTGTGTTCATTATATCGCTGCTTGAATTCTCTTTCGGTAAGGCCAATGTA TGATTTCTTATCATGGTTAGGTGCTGTAACTTCGCATTTATATACAATGG ATTTGGTTTTGCATTTGTTTTGTAACGGACATGCATTTTTATTACGACAG CTGCAATGTTGGTCGTTGTCTTCAGGTTTCAATAAAATCTTTTTATTGTG GGAGTTTATAATAGAACGGACGTATTATATATTACTCATTAATTTTTACG ACTTGTCGATTCTGGCTGCGTTTAGACCAACTGGCATTTGTAATTTGGCA TTTGCTCATGAGTGAGTCGATTTTAATAGCTTTTCCATTGAATTTTCTGT CATGGCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNAACCTTTTTGCCGTAGGGCTAGGCTATGGCAAATCTTGCAAAT TTTACAATCTATAGAAAGAACTGAATAAAAAACGTGCAAATACTTTAAAA AATCTAAAATATCATTTTTCTCTTTGTTTTGGTTCCTTTGTTTGATTTGA AATGCCAGAAAAGGGGATTCCTTTGCTCAAAATGGCATTTTNNTGTCATC ATTAGGCGTTTGACAAACCGAACAATTGCGCGGAACAATAGAATTGAAAA GAATACTGCAAGCAATTACAAATGCCAGGCTGGTCTAAACGCAGCCTCTA GCGGTGTTTGAGTTTTGATTTTTTTTCGATTAGATCAAACTTGTATCATA TGTAGCTGATGATTGTAAGCATGAAACTTTAAGTTCTATATTTCAAAAAA AGTTTTGACTCATCATTATTGTATTGCTCCTTTACGTAGAGCACTGTCTT TGGTGAAACAAACCCACCTTTATTGCTACTAAGAACATGTTAATACATTT CATAGGTGTAGCGAGATTTATGGAGGAGAGCGGTTTTTACGACACTGTAA TTATTGTCTTTGTTTTATCAAAAGATAATGAATATGTCATAAACGTCTGC ACTCCCTCATAAATTTTGCAGGGTATCTCGCTTCGCCCATGCATTTTTAG GCTTAAAGCTTGAAAAGTTGAGAGCATCAGAAGGCTTCTAAAAATCTGGA TGTTCTTATAAAAAAACATGTAGTTGTGCATTTTGTCTCGTAGGTTTGAT TGTGGATTGTTTCAACCTTGCAAAAGATGTGATCCCAGAAGCGCAGTGGA TTGGTGTAGGGTCGATCGTTCTTTTTCAGCAAGGAGGTTACAGTGGTAAC AATGACTTAGGT

Coding sequence (CDS) from alignment at scaffold_444:58739..72900-

>TCONS_00065757 ID=TCONS_00065757|Name=TCONS_00065757|organism=Clytia hemisphaerica|type=CDS|length=2388bp|location=Sequence derived from alignment at scaffold_444:58739..72900- (Clytia hemisphaerica)
ATGGGTGCAGCGAATTCCAGAGATAGGCGGTCATCATCAGGACCACTAAT
CACATTATCCTGTCCTGAATGTTCTGAAAGGTTTGGTAACGAACTTGCCC
TTGTTCAACATTACAATCAAACACATCCAAACATTCCTCACAACGAAAGT
GCTAGCAACAATTCAAACCCTCATAAATTCAACGTTGGAGATCGTGTTTT
GGCAATGTGGGAAAGTGCAAAATGGCAATATTTCCCAGCAACTATTGCGA
GAGAAATTGACGATCGATTAAAATATGAAATTGATTGGGACGATGGTGAT
ACGACAGGCCGAGTAGTCGACTCCTCTAATATTTATCAAAACACTCCGGT
CAATCCTCAAGACGTTCAAGCTGGAACAAAAGTGTTATTCAAGCAAGGTT
CATATGGGGCAGGTGGATGTCAGTTGACAGGTGGTGACAGGTGGCACGAA
GGAATCATAACAGAAGCTCATAGACTTCCAGGAGGTATCTATCGATTTAG
TGGGCATCACACCAAAGGAGCCAATGATGGAAAGAGTTTAGGATACCACG
GATATAACCACAATTTCAAGAACTATACTATAGATTCACTACGACTTTCC
ACCAGTAATTCAAATGTTACAGGAAATGATTTATTAACGAATAGGACTTC
TGCCTTGCAGAATAATAGTTCCAATACCTCATCAGGAGGTGCTTTCGAAG
TTGGAGATCGCGTTTTGGCAATGTGGGGATTGAACAAATGGCAATATTTC
CCAGCAACCATTGCAAGAGAAATTGAAGATGGATTGAAATATGAAATTGA
TTGGGACGATGGCGATACGACAGGGCGCATCGTTAATGTTTGTAACATTT
ACCGTGATATCAAACCAAATTCATCAAACATTGAGATCGGATCCAAAGTC
CTTTTCAGTCAAGGCTCATATAGGGCGGGTGACACACAAACCAGTGGCGG
TAAACGATGGCATGAGGGCGTTGTGACATCAATAAATAGTGTAGGTGGGC
GTCTCCAACTTAGCGGTCACCATACTAAGGGCGTAGCTGATGGAAAGTCG
ACCTCTTATGGAGGATATGTTTATAATTTCACCAATTATGCTGTTGACTC
TCTACGACTATCAGGTTCATCCACACATGCCACAGCTACGAACAATCATA
CACATAGTCAAGGTACAATAAACAATGCTAACATCAATAGGACTTTCAAC
ACCGGTGATGGTGTCTTAGCCATGTGGAGTTTGGAAATGTGGCAATATTT
CCGAGCAACCATAGTCAGAAAAATACCAGGAAAAAATCAATATGAAATCA
ACTGGGATGATGGTGATACGACAGGTCGAATCGTTGACTCTTTCAATATT
TATCTCAACGCAAATCAACCGGGCGAAGTGATTACAGAAGGGAGTAAAGT
ACTTTTCCAACAAGGAGCTTACTCAGCTGGTTCTACTCAACAATCGGGTG
GTAATAGGTGGCATGAGGGCGTGATCACGAATGTGCATACCCTACCAGGT
GGCGTGTACCGATACACTGGTCATCATACTAAAAGTGCCAACGACGGTAA
ATGGATCGACTATGTCGGTTATCAATACAAGTTTGAACGAGTATCAGGCT
CTGAGTTACGACTTTTTGATAATACATCTTCCAGCAATGTTTCGAACCAC
TCAATGGTATCTTTACAACCGTCCATAGCTCCAAGAAAACATGTTGATTT
AGACACGAAGTTTTACCTGGAAGTTGGTGATCGTGTGTTAGCAGAGTATA
AAAGGAATGGGAAATTCTACTCAGCTACCATTTGTGAAATTCTTTCAAAT
TCAAAATACATGGTAAACTGGTTTGACGGAGATGTGAATGGTCGCGAGGT
CAGGCATATCGAACTCAACTTAGACTCGATTCCAAAGCCTGATGAACTAT
CAAAAGACACCATTATATTTTTCCAAGATGAAGAACTATGGCACCCAGGG
TTGATCACAAACATTTATAACGGTATTGACGGGACCTCTTTGTACGATGT
TGGAACACTCCACGGTGCAAAATCTTATGAGGGACTACCGATAGATAAAT
TATCATCAAAAATTGAAGTGACAGACACAGGATTCTTGATGACACCAACA
ACGTCTTTACCGCCTGTTAATCCCCAGATGGCAAATAACAGGTTGAACGT
TGGTGATAGAGTTCTTGCGATGTGGATTAAAACAAAATGGCAATATTTTC
CAGCTACCATCAGAAAAGTCCTTCCGAATTTACAATACAAAATAGAATGG
GATGACCAAGATTCAACAGGTTTGATTGTGGATTGTTTCAACCTTGCAAA
AGATGTGATCCCAGAAGCGCAGTGGATTGGTGTAGGGTCGATCGTTCTTT
TTCAGCAAGGAGGTTACAGTGGTAACAATGACTTAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041196XLOC_041196Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065757-exon-scaffold_444-1575043694:72430..72900TCONS_00065757-exon-scaffold_444-1575043694:72430..72900Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1575043694:71058..71573TCONS_00065757-exon-scaffold_444-1575043694:71058..71573Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1575043694:69830..70330TCONS_00065757-exon-scaffold_444-1575043694:69830..70330Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1575043694:68912..69427TCONS_00065757-exon-scaffold_444-1575043694:68912..69427Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1575043694:67780..68066TCONS_00065757-exon-scaffold_444-1575043694:67780..68066Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1575043694:65568..65709TCONS_00065757-exon-scaffold_444-1575043694:65568..65709Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1575043694:58739..58857TCONS_00065757-exon-scaffold_444-1575043694:58739..58857Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1510915933:72430..72900TCONS_00065757-exon-scaffold_444-1510915933:72430..72900Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1510915933:71058..71573TCONS_00065757-exon-scaffold_444-1510915933:71058..71573Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1510915933:69830..70330TCONS_00065757-exon-scaffold_444-1510915933:69830..70330Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1510915933:68912..69427TCONS_00065757-exon-scaffold_444-1510915933:68912..69427Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1510915933:67780..68066TCONS_00065757-exon-scaffold_444-1510915933:67780..68066Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1510915933:65568..65709TCONS_00065757-exon-scaffold_444-1510915933:65568..65709Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1510915933:58739..58857TCONS_00065757-exon-scaffold_444-1510915933:58739..58857Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1491911889:72430..72900TCONS_00065757-exon-scaffold_444-1491911889:72430..72900Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1491911889:71058..71573TCONS_00065757-exon-scaffold_444-1491911889:71058..71573Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1491911889:69830..70330TCONS_00065757-exon-scaffold_444-1491911889:69830..70330Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1491911889:68912..69427TCONS_00065757-exon-scaffold_444-1491911889:68912..69427Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1491911889:67780..68066TCONS_00065757-exon-scaffold_444-1491911889:67780..68066Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1491911889:65568..65709TCONS_00065757-exon-scaffold_444-1491911889:65568..65709Clytia hemisphaericaexon
TCONS_00065757-exon-scaffold_444-1491911889:58739..58857TCONS_00065757-exon-scaffold_444-1491911889:58739..58857Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065757-proteinTCONS_00065757-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_444supercontigscaffold_444:58739..72900 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.45426 0.457741 0.154261 0.0761543 115.045 84.4883 35.3334 36.9789 16.3582 29.8086 25.1591 16.4276 17.432 13.0938 6.43141 8.93185 8.60486 10.5091 13.7818 12.7675 17.4072 17.2883 6.73628 8.67908 23.3455 27.466 16.4441 18.3473 4.73942 4.1438
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065757 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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