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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065763 ID=TCONS_00065763|Name=TCONS_00065763|organism=Clytia hemisphaerica|type=transcript|length=416bp
CTTTGAAGTAGAATGCCTTTTGTTGTGCGCTATTTCTAACAGAAACCATG
TTCATTTTTCGAATACTACTGGAAAATGCAGTTGTATCGAGAAAGTTTGT
GCAACTAACGGGATTGATGGTTTTTGGTatcaaaagGAAGCTGACAAatc
aaatgaagaagaagacaGTCTATCAACAACAAGAGCCGAAACTACAACAA
TAAGCAATCAAGTTTTTCCCATGGAAATCCAGCACTATGTATCACAAGGT
TCATCAGAAGACGCAACAACGGCAACAACATCTTCAACGACAAGAGCTAC
TCCAACAACAGTGACTTCAACAAGCCCCACAACATCTTCTCCGACCACCT
CCactacgacaacgaccactccttctatgacaacgaccactcctactacg
acaacgaccactccta Run BLAST on NCBI transcript from alignment at scaffold_444:88228..91518- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065763 ID=TCONS_00065763|Name=TCONS_00065763|organism=Clytia hemisphaerica|type=transcript|length=3291bp|location=Sequence derived from alignment at scaffold_444:88228..91518- (Clytia hemisphaerica)
CTTTGAAGTAGAATGCCTTTTGTTGTGCGCTATTTCTAACAGAAACCATG
TTCATTTTTCGAATACTACTGGAAAATGCAGTTGTATCGAGAAAGTTTGT
GCAACTAACGGGATTGATGGTTTTTGGTATCAAAAGGTAAAAAAAATTAG
TTTTTGTGGAGTAAGTTTACTGTCCATTTTTCTTCATTAATACATTATTA
AACGCATGTGTCACAGACCCGGTAGGACCCCCTAACCACTGGAAAATTTG
GCTAAATTTCATCCCTGAAAAATGCCCTATATTTATTAACCCACTGGAAA
ATTGACTTTGTTTTCGACCCCATTTAAAATTTTTGACCTGGAAACGATCG
AATTTCTATCCTCATTGGGTTTTTGATAGCAATTTTCATCTTCACTGAGG
GAAGAAGTTTCATCGGGGCTGTGAGACGGGGGTGTATTATTCATTTTGTA
ATCTCATGGTTGATTGAATTTCGATTGACGTTTTTACTTACGTTAATTTG
TAATTTCCCGCGAACTTGTAATTTCCTTCCTAGGTTTTGTAATTTCCCTC
CAAGGTTTTGTATTTTTCCGCAAAAGTGAAATTTTCATTGTTTGGAAATT
CATCACCTTTTTCGAATTTCTTACTAACTTCGAAGGCTTAAAAGTAAATG
GAATAGTATCCAATTATACTCGATTCACGTTTCTATGACTTTTTTGAGAC
CTCACTTTCAGATTGATTTCCAGTGTTAAATTGACGTCTTTCAGAATTGT
TAGAATTTCAATCCAAACCCAGAATCCCATGCTTGTTTCCATGAAATCCT
GGATAAATTACTCTCGGTCAAATTGCGAAATATTTTAAATTTCCCTCGTT
GCACTCGGGAAATTTCCCAAACTTTCAAAATTGACCTCGGGAAATTTATC
CCGAATTTCCCTCATAACCATGAGATTACACTATTACAAAAATGATGCTC
TATTCTTAATAATTTCAGGATTCCTTCAAAATAATACTGTTTCTTTGCAG
GAAGCTGACNAGAATTCAAGATTCAAGGAGAAAACAGGCAATTTTTGTAC
ATAATTCATCATATCTTTTTAACGCACAGACAAAATATTTTTTCCGTAGA
TCAGATTCTTTCAATAAAGAAAACGTACGATTTTTTTACAGTCGATGTTT
GTTTATCTTTGTCGACCAGCACTATATGTAGCTGTTATAAGCCTTTGTAG
GCTAATCACGAATGAAAACTACCTCAATTGCAGTATACCGCAATTGAGGG
ATTTCCCTGACAGATGAAGGTTATCTTTAAGCCCCCTTTTCTACGTGATT
ATGATGTGCCCCTGATGTTTTAATCGACGTCGACATATTGTCATAAAGTT
GCGTCATGAATATGTAAATGTTAAGTAACTTGTACGTCGTTTCGGGGTCG
TGAAGTCATGTCAATAAGACGCCAGTTATATATTCATATTTTTGACGTAA
AAACTAGACGTTATATTTACATCGTTTATTTGCGGCATAATTACGACGTT
AATGTTACGTCGCTTCCCTGCTGGGAAGGGGTGATTGTCTTTTCTGTAAA
CAGACCCTATTACTACAACAATTCATGGATATACTCTCTGGTACAGAGTA
ATGATATCCGGAATGTGGTGTGTTTGGGATCTTTTCAAACTAGAGAAAAG
TAGTTTTTATAGATAGCAAAGCAGTTTGAGTTTGCACAGTATTTAACAAA
CTTTGGACGAGTTATTATTGACTCACTAGACGCAATAGGTGGATAAACTT
CATAAAGAATTTAAAACAGTCTTCAAAACCTACAGTGTACAGAAGATATT
GTTGGATAATTTTGCAGCATAAAGTATAAAGTCGAAGATTAAAATGAATG
CGACCATGAAATTTTGTTGCTCTGGATTATTGGTATTTTCAATTCTAACG
TTACAGATCAATGCTACCAAACACGATGTTTATCGCTTGGTTGAAAATAC
TATTATAATCGAGGAAGATTGCCAGACTGAAAATGGAATTGAATATGACA
CCTACTTTGAAGTAGAATGCCTTTTGTTGTGCGCTATTTCTAACAGAAAC
CATGTTCATTTTTCGAATACTACTGGAAAATGCAGTTGTATCGAGAAAGT
TTGTGCAACTAACGGGATTGATGGTTTTTGGTATCAAAAGGTAAAAAAAA
TTAGTTTTTGTGGAGTAAGTTTACTGTCCATTTTTCTTCATTAATACATT
ATTAAACGCATGTGTCACAGACCCGGTAGGACCCCCTAACCACTGGAAAA
TTTGGCTAAATTTCATCCCTGAAAAATGCCCTATATTTATTAACCCACTG
GAAAATTGACTTTGTTTTCGACCCCATTTAAAATTTTTGACCTGGAAACG
ATCGAATTTCTATCCTCATTGGGTTTTTGATAGCAATTTTCATCTTCACT
GAGGGAAGAAGTTTCATCGGGGCTGTGAGACGGGGGTGTATTATTCATTT
TGTAATCTCATGGTTGATTGAATTTCGATTGACGTTTTTACTTACGTTAA
TTTGCAATTTCCCGCGAACTTGTAATTTCCTTCCTAGGTTTTGTAATTTC
CCTCCAAGGTTTTGTATTTTCCCGCAAAAGTGAAATTTTCATTGTTTGGA
AATTCATCACCTTTTCCGAATTTCTTACTAACTTCGAAGGCTTAAAAGTA
AATGGAATAGTATCCAATTATACATTATACTCGATTCGCGTTTCTATGAC
TTTTTTGAGACCTCACTTTCAGATTGATTTCCAGTGTTAAATTGACGTCT
TTCAGAATTGTTAGAATTTCAATCCAAACCCAGAATCCCATGCTTGTTTC
CATGAAATCCTGGATAAATTACTCTCGGTCAAATTGCGAAATATTTTAAA
TTTCCCTCGTTGCACTCGGGAAATTTCACAAACTTTCAAAATTGACCTCG
GGAAATTTATCCCGAATTTCCCTCATAACCATGAGATTACACTATTACAA
AAATGCTGCTCTATTCTTAATAATTTCAGAATTCCTTCAAAATAATACTG
TTTCTTTGCAGGAAGCTGACAAATCAAATGAAGAAGAAGACAGTCTATCA
ACAACAAGAGCCGAAACTACAACAATAAGCAATCAAGTTTTTCCCATGGA
AATCCAGCACTATGTATCACAAGGTTCATCAGAAGACGCAACAACGGCAA
CAACATCTTCAACGACAAGAGCTACTCCAACAACAGTGACTTCAACAAGC
CCCACAACATCTTCTCCGACCACCTCCACTACGACAACGACCACTCCTTC
TATGACAACGACCACTCCTACTACGACAACGACCACTCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065763-exon-scaffold_444-1575043694:91383..91518 | TCONS_00065763-exon-scaffold_444-1575043694:91383..91518 | Clytia hemisphaerica | exon |
| TCONS_00065763-exon-scaffold_444-1575043694:88228..88507 | TCONS_00065763-exon-scaffold_444-1575043694:88228..88507 | Clytia hemisphaerica | exon |
| TCONS_00065763-exon-scaffold_444-1510915933:91383..91518 | TCONS_00065763-exon-scaffold_444-1510915933:91383..91518 | Clytia hemisphaerica | exon |
| TCONS_00065763-exon-scaffold_444-1510915933:88228..88507 | TCONS_00065763-exon-scaffold_444-1510915933:88228..88507 | Clytia hemisphaerica | exon |
| TCONS_00065763-exon-scaffold_444-1491911889:91383..91518 | TCONS_00065763-exon-scaffold_444-1491911889:91383..91518 | Clytia hemisphaerica | exon |
| TCONS_00065763-exon-scaffold_444-1491911889:88228..88507 | TCONS_00065763-exon-scaffold_444-1491911889:88228..88507 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_444 | supercontig | scaffold_444:88228..91518 - |
Blast
The following BLAST results are available for this feature:
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