TCONS_00065815 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065815
Unique NameTCONS_00065815
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1915

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065815 ID=TCONS_00065815|Name=TCONS_00065815|organism=Clytia hemisphaerica|type=transcript|length=1915bp
TTACACAAGGAATGCAGCAAATGTACGAAAAATATCCAAAGATGCTCGAC
ATTTGGTAGCAATCATCGAAATCATCAGgCAACAGACATTCAAGctctaa
aacaaaaacagaacgCAAGAATTGAATCTTCAAAGCAACAAGTTCGTCGC
TTTTCAACATCTGGTAACAACATGCCACCAAAAATCTTCAACCGATTTAA
TACATTTGAATCTCAGCAAAGACGTTTCAAAAGTACCACAACAACCACCC
TGCCCAAAAGTGGCGTTGTTACAAAAAACGCCCGTCGATCAGTATCGACT
GGTGAAAATTCAAAAGCCACTGCCGCCCTTATGGAAAAAGATATCTACTA
TGATGTTCCACCTGTTGAGGTACCAAGCCACATTCAGGCTACCATTTTTA
AAGGGAAGAACAAACCCCCAGTTCTGGAGACAGTTTCCATGCCAACGATA
CAACAAGAGACTGATATTATCGTCAAGGtgctcaaaacaacaatttgtGG
AACAGACCTACATATCCTTGGTGGTAATGTTTTCACAGCTACAGAGGGAC
GTCGCTTAGGTCACGAAGGAATTGGAGAGATCGTCGAAACAGGTTCGCAA
GTTCAGAATTTCCAAGTTGGCGATCGTGTTTTAGTAGCCTGTATCACAAA
CTGTGGTGAATGCCAGCACTGTCAAAATAAGTTTTATGGACATTGTGAAG
ATGGTGGATGGCGGTTAGGGAATACAATTGATGGAATGCAAGGACAGTAT
GCGCGGATTCCGCATGCGGATACAAGTTGTCATTATGTGCCACCACATGT
TCATGACACAGAAATGGAAGACGCATTAGTGATGTGTTCCGATATTTTGC
CAACCGGTCTCGAAGTTGGATTATTAGATGGAGCTCTCAAACAAAACGAA
AACATTGCTATCATTGGAGCTGGACCAGTTGGTTTAGCTGCTTTGACATG
CGCAGTAGGAATGTTTAATCCTCAAAACAGCATTGTTGTTGACGTCAACG
ATTTTAGACTGGATGTAGCAAAAGATATCGGGGCTAGTCACATCATCAAT
AATAAAAACGGTGACGCAACAGAAAAGATCTTAGAGATTACCGAAGGTAA
AGGAGTGGATCTTGTTGTAGAAGCTATTGGTATACCAGAAGGGTGGTACA
TGTGCCAAGATTCGGTCAAATCAGGGGGTCGTATTGCTATGTTAGGCGTT
CACGGAGTGCCAGCTACTATCAATTTAGAGAAAATGTGGTACAGAAATTT
CACTTTTACTGCAGGAATGATGCATGGATTCACAATCCCATCTCTGATGT
CAGCAATCCTAGAAGGGAAATTAAACGCTGAACCTTTGATTACACACCGG
CTGTATCTCTCCGATGTTCAAAACGCTTATACAATGTTCAAAGATGCTGG
TCAATACGAAGCTATGAAGATAATGTTGATTAATGATCTTGATTGAGGAT
GGTTTGATTGGCGTTTTCATATGGATATGATGAGGGATTTCCCAGATATG
AAGAATTCCGTTTTTGGTGGGTGGTGTTTTTGTTGCAAGTTGGCGATAAA
TCATGAATGAATATTGGAAATGACACAGAACGTTTTCTCCTTGGAAGGAC
TTCGAGATTCAAGAGCTGCTGTCATTGGGTGTGGCAGCTACACCCGAAAT
TAAACAAAGAACAGTTATGAAACTTAATGCTACTACGCAAAAAGAGtgca
catttttcaaaaaaaaaattgagaactgtgttttttcattttttgaaaat
tgaaaaattgaaatttgtatattatgtttttctaaagaatttgAGTTTAA
TCCTACATTATCACTCGGTACCTAAGTACCAAActgtaaataattatttt
ttcaagtcTCAGAGACGTTGACCGCAATTTTTCtattataatattttata
aTGGGTATGTTAACA
Run BLAST on NCBI

protein sequence of TCONS_00065815-protein

>TCONS_00065815-protein ID=TCONS_00065815-protein|Name=TCONS_00065815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=481bp
LHKECSKCTKNIQRCSTFGSNHRNHQATDIQALKQKQNARIESSKQQVRR
FSTSGNNMPPKIFNRFNTFESQQRRFKSTTTTTLPKSGVVTKNARRSVST
GENSKATAALMEKDIYYDVPPVEVPSHIQATIFKGKNKPPVLETVSMPTI
QQETDIIVKVLKTTICGTDLHILGGNVFTATEGRRLGHEGIGEIVETGSQ
VQNFQVGDRVLVACITNCGECQHCQNKFYGHCEDGGWRLGNTIDGMQGQY
ARIPHADTSCHYVPPHVHDTEMEDALVMCSDILPTGLEVGLLDGALKQNE
NIAIIGAGPVGLAALTCAVGMFNPQNSIVVDVNDFRLDVAKDIGASHIIN
NKNGDATEKILEITEGKGVDLVVEAIGIPEGWYMCQDSVKSGGRIAMLGV
HGVPATINLEKMWYRNFTFTAGMMHGFTIPSLMSAILEGKLNAEPLITHR
LYLSDVQNAYTMFKDAGQYEAMKIMLINDLD
Run BLAST on NCBI

transcript from alignment at scaffold_445:36003..42925-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065815 ID=TCONS_00065815|Name=TCONS_00065815|organism=Clytia hemisphaerica|type=transcript|length=6923bp|location=Sequence derived from alignment at scaffold_445:36003..42925- (Clytia hemisphaerica)
TTACACAAGGAATGCAGCAAATGTACGAAAAATATCCAAAGATGCTCGAC
ATTTGGTAGCAATCATCGAAATCATCAGGTAATTTCCATAAGAATTTTAC
TAGATATCTATCTACGTGAACACTCTTTTACTACATTGTAGAAACTACTC
TTAAGGGATTTACTTTAATGACATTGGCATGGTTTCTACATGGTGGCAAA
AGATGTGTGCAATTGAAACGAATGGTCTTTAGTTTTCTGTAAGGATGAAT
GTTTTGAATTTTGGGTTCACCGGGGTAAAAAGCGAAATTGATATTTTTGA
AGAATAGCTCAAGTTGTTTTTCTTTTGTAGGCAACAGACATTCAAGCTCT
AAAACAAAAACAGAACGCAAGAATTGAATCTTCAAAGCAACAAGTTCGTC
GCTTTTCAACATCTGGTAACAACATGCCACCAAAAATCTTCAACCGATTT
AATACATTTGAATCTCAGCAAAGACGTTTCAAAAGTACCACAACAACCAC
CCTGCCCAAAAGTGGCGTTGTTACAAAAAACGCCCGTCGATCAGTATCGA
CTGGTGAAAATTCAAAAGCCACTGCCGCCCTTATGGAAAAAGATATCTAC
TATGATGTTCCACCTGTTGAGGTACCAAGCCACATTCAGGCTACCATTTT
TAAAGGGAAGAACAAACCCCCAGTTCTGGAGACAGTTTCCATGCCAACGA
TACAACAAGAGACTGATATTATCGTCAAGGTGCTCAAAACAACAATTTGT
GGAACAGACCTACATATCCTTGGTAAGTTAGAATCGATAAGAAATCAACC
CGCCTTCCACAGTTTATAAACAGGAATTATCCATTGAAACATCGCCACTA
AATATAGCGTGAAATCTATCGCACTGAATTAATCTAATTTTGACGCAAAA
ATCACTCTCAATAATAAACTTTTGGTGGAAATTTTCTTTTTCTCGGGCCT
TTAATTATCACGAGTTTAGGAATTTGCATGTAAATCTCGTTACCTTTTTT
TATGTCAAACTTTATAGGTGGTAATGTTTTCACAGCTACAGAGGGACGTC
GCTTAGGTCACGAAGGAATTGGAGAGATCGTCGAAACAGGTTCGCAAGTT
CAGAATTTCCAAGTTGGCGATCGTGTTTTAGTAGCCTGTATCACAAACTG
TGGTGAATGCCAGCACTGTCAAAATAAGTTTTATGGACATTGTGAAGATG
GTGGATGGCGGTTAGGGAATACAATTGATGGAATGCAAGGACAGTATGCG
CGGATTCCGCATGCGGATACAAGTTGTCATTATGTGCCACCACATGTTCA
TGACACAGAAATGGAAGGTTAGTATAAAATGTTTTTGATCTCTTTTTAAA
CTTTTAACTAATAAGTTCCCTTTTTGCCGATCAGAATATGCTTTCAGAAA
TAACACAAGGGGGAGAGGGATAAAGCTAAAATAGTAATACTTTATGTTAT
ACTGTTACTTGATACACGTTGCTTCACCGGTGTTAAATTTTCAAAGATTT
TTTAAAGAAAATCCTTTTTCATTAAATTAAGACACCATTTAAACAAAAGG
ATTGCCTTGATAACTGGTCTTTAGAGACACATTATGAAATGTTACAAATG
ACGTCTAATCACCTTCTTTTTCAATTCTAGACGCATTAGTGATGTGTTCC
GATATTTTGCCAACCGGTCTCGAAGTTGGATTATTAGATGGAGCTCTCAA
ACAAAACGAAAACATTGCTATCATTGGAGCTGGACCAGTTGGTTTAGCTG
CTTTGACATGCGCAGTAGGAATGTTTAATCCTCAAAACAGCATTGTTGTT
GACGTCAACGATTTTAGACTAGATGTAGCAAAAGATATCGGGGCTAGTCA
CATCATCAATAATAAGTAAGTTGCCTTACTTTCTTTTCTGAGGCAAATTA
TAGTAATATGGTTGTCAAGGAAACTCGTGCTAAAATTAGGAAAGTAAAAA
TATAACAGAACAAGAAATCTAAGTGTTTCAAGATTTTAGAAGTGATGAAA
CAATAAACGAGTTTCCAGTCTATAACATGGTGTACAGTTTACTCCAGACT
GTTAAATCATATTCTATTTCGTTACGTTACATAAACCCAAAAAATCGAGT
TTGACCTTTCTCGCCCATCAAATAGAAAGATATTTCCCAATATTTTTGTT
CGATGGCTCTACTTGTATCTTTTGAANTCGGGCCTTTAATTATCACGAGT
TTAGGAATTTGCATGTAAATCTCGTTACCTTTTTTTATGTCAAACTTTAT
AGGTGGCAATGTTTTCACAGCTACAGAAGGACGTCGCTTAGGTCACGAAG
GAATTGGAGAGATTGTCGAAACAGGTTCGCAAGTCCAGAATTTCCAAGTT
GGTGATCGTGTTCTAGTAGCCTGTATCACAAACTGTGGTGAATGCCAGCA
CTGTCAAAATAAGTTTTATGGACATTGTGAAGATGGTGGATGGCGGTTAG
GGAATACAATTGATGGAATGCAAGGACAGTATGCGCGGATTCCGCATGCG
GATACAAGTTGCCATTATGTGCCACCACATGTTCATGACACAGAAATGGA
AGGTTAGTATAAAATGTTTTTGATCTCTTTTTAAACTTTTAACTAAGAAG
TTCCCTTTTTGCCGATCAGAATATGCTTTCAGAAATAACACAAGGGGGAG
AGGGATAAAGCTAAAATAGTAATACTTTATGTTATACTGTTACTTGATAC
ACGTTGCTTCACCGGTGTTAAATTTTCAAAGATTTTTTAAAGAAAATCCT
TTTTCATTAAATTAAGACACCATTTAAACAAAAGGATTGCCTTGATAACT
GGTCTTTAGAGACACATTATGAAATGTTACAAATGACGTCTAATCACCTT
CTTTTTCAATTCTAGACGCATTAGTGATGTGTTCCGATATTTTGCCAACC
GGTCTCGAAGTTGGATTATTAGATGGAGCTCTCAAACAAAACGAAAACAT
TGCTATCATTGGAGCTGGACCAGTTGGTTTAGCTGCTTTGACATGCGCAG
TAGGAATGTTTAATCCTCAAAACAGCATTGTTGTTGACGTCAACGATTTT
AGACTAGATGTAGCAAAAGATATCGGGGCTAGTCACATCATCAATAATAA
GTAAGTTGCCTTACTTTCTTTTCTGAGGCAAATTATAGTAATATGGTTGT
CAAGGAAACTCGTGCTAAAATTAGGAAAGTAAAAATATAACAGAACAAGA
AATCTAAGTGTTTCAAGATTTTAGAAGTGATGAAACAATAAACGAGTTTC
CAGTCTATAACATGGTGTACAGTTTACTCCAGACTGTTAAATCATATTCT
ATTTCGTTACGTTACATAAACCCAAAAAATCGAGTTTGACCTTTCTCGCC
CATCAAATAGAAAGATATTTCCCAATATTTTTGTTCGATGGCTCTACTTG
TATCTTTTGAANCAGGCTACCATTTTTAAAGGGAAGAACAAACCCCCAGT
TCTGGAGACAGTTTCCATGCCAACGATACAACAAGAGACTGATATTATCG
TCAAGGTGCTCAAAACAACAATTTGTGGAACAGACCTACATATCCTTGGT
AAGTTAGAATCGATAAGAAATCAACCCGCCTTCCACAGTTTATAAACAGG
AATTATCCATTGAAACATCGCCACTAAATATAGCGTGAAATCTATCGCAC
TGAATTAATCTAATTTTGACGCAAAAATCACTCTCAATAATAAACTTTTG
GTGGAAATTTTCTTTTTCTCGGGCCTTTAATTATCACGAGTTTAGGAATT
TGCATGTAAATCTCGTTACCTTTTTTTATGTCAAACTTTATAGGTGGCAA
TGTTTTCACAGCTACAGAAGGACGTCGCTTAGGTCACGAAGGAATTGGAG
AGATTGTCGAAACAGGTTCGCAAGTCCAGAATTTCCAAGTTGGTGATCGT
GTTCTAGTAGCCTGTATCACAAACTGTGGTGAATGCCAGCACTGTCAAAA
TAAGTTTTATGGACATTGTGAAGATGGTGGATGGCGGTTAGGGAATACAA
TTGATGGAATGCAAGGACAGTATGCGCGGATTCCGCATGCGGATACAAGT
TGTCATTATGTGCCACCACATGTTCATGACACAGAAATGGAAGGTTAGTA
TAAAATGTTTTTGATCTCTTTTTAAACTTTTAACTAATAAGTTCCCTTTT
TGCCGATCAGAATATGCTTTCAGAAATAACACAAGGGGGAGAGGGATAAA
GCTAAAATAGTAATACTTTATGTTATACTGTTACTTGATACACGTTGCTT
CACCGGTGTTAAATTTTCAAAGATTTTTCAAAGAAAATCCTTTTTCATTA
AATTAAGACACCATTTAAACAAAAGGATTGCCTTGATAACTGGTCTTTAG
AGACACATTATGAAATGTTACAAATGACGTCTAATCACCTTCTTTTTCAA
TTCTAGACGCATTAGTGATGTGTTCCGATATTTTGCCAACCGGTCTCGAA
GTTGGATTATTAGATGGAGCTCTCAAACAAAACGAAAACATTGCTATCAT
TGGAGCTGGACCAGTTGGTTTAGCTGCTTTGACATGCGCAGTAGGAATGT
TTAATCCTCAAAACAGCATTGTTGTTGACGTCAACGATTTTAGACTGGAT
GTAGCAAAAGATATCGGGGCTAGTCACATCATCAATAATAAGTAAGTTGC
CTTATACATGGTTGTCAAGGAAACTCGTGCTAAAATTAGGAAGGTTAAAA
TATAACAGAACAAGAAATCTGAGTGTTTCAAGATTTTAGAAGTGATGATA
CAATAAACGAGTTTCCAGTCTATAACATGGTGTACAGTTTACTCCAGACT
GTTAAAATCATATTCTATTTCGTTACGTTACATAAACCCAAAAAATCGAG
TTTGACCTTTCTCGCCCATCAAACAGAAAGATATTTCCCAATATTTTTGT
TCGATGGCTCTACTTGTATCTTTTGAACTGCGCAAGCTCACACAATGAAG
TTTGCTCCATCTAAAGCAATTAGATAGTCTTCCGCTAAATAGAAACTGTA
AAAGTTTATGAAACCTTTATTAAAGTAAAAATCTCCTAAGAAGCGTTTAG
TTGGCTAAGACGAAAGAAAAGTTTGTCTGTTTATTTGAGAGCTCTCATAA
TTAGAAACTATTTTTCTTCCTTTTATTTAAGAAACGGTGACGCAACAGAA
AAGATCTTAGAGATTACCGAAGGTAAAGGAGTGGATCTTGTTGTAGAAGC
TATTGGTATACCAGAAGGGTGGTACATGTGCCAAGATTCGGTCAAATCAG
GGGGTCGTATTGCTATGTTAGGCGTTCACGGAGTGCCAGCTACTATCAAT
TTAGAGAAAATGTGGTACAGAAATTTCACTTTTACTGCAGGTATGAACTT
TTATTTATATACTATATACTAAATTTCACTAAATTCTCTATTTAGAGTGA
TCAGCTACAGCTATAGATAAGGATTATGCAACATAATGAATTACTAGCTC
CAGTCCCCTTTCGCGTTCAAGTTAATGAAACTCGAATTTAGATTGCAACA
AAATAATCAGAATCATTGAACTGATCCTTACCGCCATCGAGCTTTTATCA
ACGAGTTTATGTATTTGCACTTTTGAGGACGGTAAAGTGACTTTAACGAT
TTGGAATAAGCCGCAGTTCTGAACCGCAAAAACAAGGACGGTAAAAGTGC
TGATTTACCGTCGTCCTCAGCCAATCAGGATGTAGTCAAATTAGAACCTT
ACCGTCTCCGTCGCTGAAAAACACACATACATAACACACTCGGTATTAGC
GAATTTATGTACCTGTGGTCTTCTAGAACGGAGACGTTAAGATTCTAATT
TGTCAACATCCTGCTTACCGAGAACGCCTTAAGTCGGCACTTTTACCGTC
CTGGATTTTGCGGGTCAACAAAGCTGCAGGTTTTTCCACTTCAGTCCACT
CCACCGTTCTCAAAAGTGCAAATACTTAAACTCACTATTTTAATCATTTT
GCAAAATGTCTGGTGAGTTCATAATTTAGTCAGGTTTAGTCTGTTATAAT
ACACCTTTTTGACCGTAGCCACCAATTACCGCGCGGGGATCATTTTTGTC
CGCTTTATCCCACTAAAACCTCCCAGTCCTTTTTTCGCTCCTATAGACAA
TAGAAAAATGCGTCAAAATAGGATTGGGACGGTTTTAGTGGGATAAAGTG
GACAAAAATATACCCGCGCGACTACGGTCGAAAAGGTGTATTTAGTGTGA
ATTTTTGAATAAAATTTTTCTTAGTTTGACGCGTTATATTGATTCTTTAT
TCGCTTTCTCCTCCTTGATCAGGAATGATGCATGGATTCACAATCCCATC
TCTGATGTCAGCAATCCTAGAAGGGAAATTAAACGCTGAACCTTTGATTA
CACACCGGCTGTATCTCTCCGATGTTCAAAACGCTTATACAATGTTCAAA
GATGCTGGTCAATACGAAGCTATGAAGATAATGTTGATTAATGATCTTGA
TTGAGGATGGTTTGATTGGCGTTTTCATATGGATATGATGAGGGATTTCC
CAGATATGAAGAATTCCGTTTTTGGTGGGTGGTGTTTTTGTTGCAAGTTG
GCGATAAATCATGAATGAATATTGGAAATGACACAGAACGTTTTCTCCTT
GGAAGGACTTCGAGATTCAAGAGCTGCTGTCATTGGGTGTGGCAGCTACA
CCCGAAATTAAACAAAGAACAGTTATGAAACTTAATGCTACTACGCAAAA
AGAGTGCACATTTTTCAAAAAAAAAATTGAGAACTGTGTTTTTTCATTTT
TTGAAAATTGAAAAATTGAAATTTGTATATTATGTTTTTCTAAAGAATTT
GAGTTTAATCCTACATTATCACTCGGTACCTAAGTACCAAACTGTAAATA
ATTATTTTTTCAAGTCTCAGAGACGTTGACCGCAATTTTTCTATTATAAT
ATTTTATAATGGGTATGTTAACA

Coding sequence (CDS) from alignment at scaffold_445:36003..42925-

>TCONS_00065815 ID=TCONS_00065815|Name=TCONS_00065815|organism=Clytia hemisphaerica|type=CDS|length=1446bp|location=Sequence derived from alignment at scaffold_445:36003..42925- (Clytia hemisphaerica)
TTACACAAGGAATGCAGCAAATGTACGAAAAATATCCAAAGATGCTCGAC
ATTTGGTAGCAATCATCGAAATCATCAGGCAACAGACATTCAAGCTCTAA
AACAAAAACAGAACGCAAGAATTGAATCTTCAAAGCAACAAGTTCGTCGC
TTTTCAACATCTGGTAACAACATGCCACCAAAAATCTTCAACCGATTTAA
TACATTTGAATCTCAGCAAAGACGTTTCAAAAGTACCACAACAACCACCC
TGCCCAAAAGTGGCGTTGTTACAAAAAACGCCCGTCGATCAGTATCGACT
GGTGAAAATTCAAAAGCCACTGCCGCCCTTATGGAAAAAGATATCTACTA
TGATGTTCCACCTGTTGAGGTACCAAGCCACATTCAGGCTACCATTTTTA
AAGGGAAGAACAAACCCCCAGTTCTGGAGACAGTTTCCATGCCAACGATA
CAACAAGAGACTGATATTATCGTCAAGGTGCTCAAAACAACAATTTGTGG
AACAGACCTACATATCCTTGGTGGTAATGTTTTCACAGCTACAGAGGGAC
GTCGCTTAGGTCACGAAGGAATTGGAGAGATCGTCGAAACAGGTTCGCAA
GTTCAGAATTTCCAAGTTGGCGATCGTGTTTTAGTAGCCTGTATCACAAA
CTGTGGTGAATGCCAGCACTGTCAAAATAAGTTTTATGGACATTGTGAAG
ATGGTGGATGGCGGTTAGGGAATACAATTGATGGAATGCAAGGACAGTAT
GCGCGGATTCCGCATGCGGATACAAGTTGTCATTATGTGCCACCACATGT
TCATGACACAGAAATGGAAGACGCATTAGTGATGTGTTCCGATATTTTGC
CAACCGGTCTCGAAGTTGGATTATTAGATGGAGCTCTCAAACAAAACGAA
AACATTGCTATCATTGGAGCTGGACCAGTTGGTTTAGCTGCTTTGACATG
CGCAGTAGGAATGTTTAATCCTCAAAACAGCATTGTTGTTGACGTCAACG
ATTTTAGACTGGATGTAGCAAAAGATATCGGGGCTAGTCACATCATCAAT
AATAAAAACGGTGACGCAACAGAAAAGATCTTAGAGATTACCGAAGGTAA
AGGAGTGGATCTTGTTGTAGAAGCTATTGGTATACCAGAAGGGTGGTACA
TGTGCCAAGATTCGGTCAAATCAGGGGGTCGTATTGCTATGTTAGGCGTT
CACGGAGTGCCAGCTACTATCAATTTAGAGAAAATGTGGTACAGAAATTT
CACTTTTACTGCAGGAATGATGCATGGATTCACAATCCCATCTCTGATGT
CAGCAATCCTAGAAGGGAAATTAAACGCTGAACCTTTGATTACACACCGG
CTGTATCTCTCCGATGTTCAAAACGCTTATACAATGTTCAAAGATGCTGG
TCAATACGAAGCTATGAAGATAATGTTGATTAATGATCTTGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041230XLOC_041230Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065815-exon-scaffold_445-1575043694:42848..42925TCONS_00065815-exon-scaffold_445-1575043694:42848..42925Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1575043694:42154..42595TCONS_00065815-exon-scaffold_445-1575043694:42154..42595Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1575043694:41609..41908TCONS_00065815-exon-scaffold_445-1575043694:41609..41908Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1575043694:41213..41295TCONS_00065815-exon-scaffold_445-1575043694:41213..41295Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1575043694:38285..38436TCONS_00065815-exon-scaffold_445-1575043694:38285..38436Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1575043694:37586..37794TCONS_00065815-exon-scaffold_445-1575043694:37586..37794Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1575043694:36003..36653TCONS_00065815-exon-scaffold_445-1575043694:36003..36653Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1510915933:42848..42925TCONS_00065815-exon-scaffold_445-1510915933:42848..42925Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1510915933:42154..42595TCONS_00065815-exon-scaffold_445-1510915933:42154..42595Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1510915933:41609..41908TCONS_00065815-exon-scaffold_445-1510915933:41609..41908Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1510915933:41213..41295TCONS_00065815-exon-scaffold_445-1510915933:41213..41295Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1510915933:38285..38436TCONS_00065815-exon-scaffold_445-1510915933:38285..38436Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1510915933:37586..37794TCONS_00065815-exon-scaffold_445-1510915933:37586..37794Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1510915933:36003..36653TCONS_00065815-exon-scaffold_445-1510915933:36003..36653Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1491911889:42848..42925TCONS_00065815-exon-scaffold_445-1491911889:42848..42925Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1491911889:42154..42595TCONS_00065815-exon-scaffold_445-1491911889:42154..42595Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1491911889:41609..41908TCONS_00065815-exon-scaffold_445-1491911889:41609..41908Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1491911889:41213..41295TCONS_00065815-exon-scaffold_445-1491911889:41213..41295Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1491911889:38285..38436TCONS_00065815-exon-scaffold_445-1491911889:38285..38436Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1491911889:37586..37794TCONS_00065815-exon-scaffold_445-1491911889:37586..37794Clytia hemisphaericaexon
TCONS_00065815-exon-scaffold_445-1491911889:36003..36653TCONS_00065815-exon-scaffold_445-1491911889:36003..36653Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065815-proteinTCONS_00065815-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_445supercontigscaffold_445:36003..42925 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.366104	0.119892	0.859978	0	0	0	0	0	0	0	0	0	0	0	0	0.0730154	4.20857	9.44053	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013154ADH_N
IPR013149ADH_C
IPR002328ADH_Zn_CS
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00065815 vs. Swiss-Prot (Human)
Match: ADH6 (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.613e-19
Identity = 93/369 (25.20%), Postives = 151/369 (40.92%), Query Frame = 1 
Query:  385 QATIFKGKNKPPVLETVSMPTIQQETDIIVKVLKTTICGTDLHILGGNVFTATEGRRLGHEGIGEIVETGSQVQNFQVGDRVLVACITNCGECQHCQNKFYGHC-----------EDGGWRLGNTIDGMQGQYARIPHADTSCHYVPPHVHDTEMEDA--------LVMCSDILPTGLEVGLLDGALKQNENIAIIGAGPVGLA-ALTCAVGMFNPQNSIVVDVNDFRLDVAKDIGASHIINNKN--GDATEKILEITEGKGVDLVVEAIG----IPEGWYMCQDSVKSGGRIAMLGVHGVPATINLE---KMWYRNFTFTAGMMHGFT----IPSLMSAILEGKLNAEPLITHRLYLSDVQNAYTMFK 1392
            +A I      P  +E V +    +  ++ +KV+ T +CGT++ +LG           LGHEG G +   G  V   + GD+V+   +  CGEC  C N     C            DG  R   T  G         +  T C Y           DA        L+ C     TG    +    +      A+ G G VGL+  + C          I VDVN  +   A+++GA+  +N ++      E + ++T+  G+D   EAIG    +      C +S    G   ++GV  +PA++ L+   ++++   +    +  G+     IP L++  +  KLN +PLITH L L  +  A  + K
Sbjct:   11 KAAILWKPGAPFSIEEVEVAP-PKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSKTQLMSDGTSRF--TCKGK--SIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCG--FSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAA--GAARIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQEVLFDMTDA-GIDFCFEAIGNLDVLAAALASCNESY---GVCVVVGV--LPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMK 364
The following BLAST results are available for this feature:
BLAST of TCONS_00065815 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADH63.613e-1925.20Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
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