TCONS_00065857 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00065857
Unique Name	TCONS_00065857
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3469

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_447:205451..214413-
coding sequence from alignment at scaffold_447:205451..214413-

transcript sequence

>TCONS_00065857 ID=TCONS_00065857|Name=TCONS_00065857|organism=Clytia hemisphaerica|type=transcript|length=3469bp
gatgaaaaagaaaatgttctGGAATCGTTAAAGTCATCTATTGCTTTGCA
AGATTGTGATTTGTGCCAGACGCATGCAGTTTTGAGCTGTCATGAATGTT
GCTTGGAGCTATGTCATAAATGTGACATAGAAATTCACAAGAACAAACCC
TTGCACAATCGTACTCTGTTTCTAGATGGCTTGGCGACACCTATACCACC
AAATGAAGTGTTaaatgaaaatgatcaaatataTGTTGTTGATCGTCTAG
TTCCATTGAAACATCCTAAATGTGTATGTGGCTCTGTTCAGTTTCACGAA
TCTACAAATCAAAGAAAAGTTGTGGTTATAACGATGAAAGGGAAATTTGA
ATTGCTTCAATCTATTTTGAGATGTTGTAAGTGCGAACGTATCACTGACC
CTTTCACTCTTTCAAATATCCTTTCATCTGGTTTTTGGCCATCCTCACCC
ACGCACTTCGGATGTTTAATAGATGTTGATGTTTTTCTAACTTGGGATCA
ATTTAAAAAACATATGCCTGGTTCCTCATCGACTGCATTTTTGGATTCTC
TAAATGATTTGACACTTTACTTTGGAAGGCAAGGAAGAATCGTGCCTTCG
TCATTTTATCAAGGTTTCAAACAATGGAACTTTATCCGATATGAACTAGA
CATGAAGAAAGGAATGGATTGGATGAAATGCCCATGTTGCTCAATCAAAC
AACATGCCTGCCATATAGACGGAAACGCAAAGTTGTACAGATATCAAAGA
TCTGGAATGCGACGTAGGAAATCGTATTACAACGAAGCATTTATCGCCGA
CgacaaaaaagttgaaacctTTGTATCTTCTCTGCGACAGGACATGGGAA
AAACAATTAAGACTTCATCTGATACATCTTGTGGGGGTGAATGGTCAGCT
GCAAGGAATACAGAACGGAAGAGAAAATCAGTGGACGATACTGGTCTTTA
CGTTGCTAGCTGTCGTCATCAGTACGGATTGAAATCCATTAACATGAAAC
GAGGAGAAATTTACGCCTATCCAGCATATTTGTTGACAAACTTCATTTTG
CCAAACAAAGTGGAATATTTATTTACCGATGTTATGTGCAAACTGTGGCC
CTACCTTTGTAAAGTTGATTCAAATTTGCCATCTAAAATTAAAGGAGCTT
TGAGTGTGATGCATGCCAAAGGTCACAACCTTAGATGTCAGgttaGTTGG
GATGGGGAATGGATTCAAGGTAGTGGCAAGTCGACCGGAGAAGAATGTGA
ACAActgttttctttcctttcacgCTGTGCTAACACAACTAAATATCAGT
CACCTGAAAatCGAGAGGAAACTCTTACTGAAATGATATTATTCTGGAAT
AGAAGAAAAACATTGGTTCTTGCTGAGAGTTTGCTGAAAAAATTTAAACG
GATAACTAAGGAGGTGTCTATATTCGAAGATAAATTGGGCAAGAAATGTG
TCGAAATGGGTATTACCATCAAAGATGTAGATTTCGTGTCCCTTCTCAAC
AAACTCAAGATTTATGCTAGTGGAGGCTCTGTATCACCTTGTAAACCAAC
ATCTCATCAGCAAATGATTCTTTTATATCACGATCTTAATAAAACTCCCT
CTGATGCATCTGAAATGTCCAAAGATCTTCTCCAGAAAATAGTACTTCCA
GACTTAAATGACGTTCATATACCACTTTTGGCGAAGAACAAAGCGGAAAA
AGAGTTACTATTAAATAACGTTTGGGATAATGACATCTCAGCTACCAAAA
TCCAAGGAGAACTTGACCTCCTGAGAAGTGCTGTCCTTGTGCCTGCTTTT
CAAAATGCAATTCAAAGTTGCCGGTTTGAAATGTTACATTGGAATATACG
ATTAAAGAAATATGCAGattctgCAAAGCTCAGATGTGCTTGTCGATTGA
AGTTTAGCGAAGTAAACAAAAAGCTAAACTCCCTACTCGAACGTTTCATT
ACAGTCAAATCTTTGGAAGACGTTAGCGAGTTTGAATTGATCAAAGAATC
CAACCACCGTTGTTGCTCGAGTTTAACGCTAAAAAAGATAGATGTCTTGA
AGAGCTTGAATTATTGAAAAGGGATATGGAATCGTATCTAACATTCTACA
CGTCCAAGATCACAACAGAGTTGAAAATTGATCACCTTGCAAGTTCTGAT
TCTGAAAGGGACAATGCCGCTGATACAGTCCTTAAACGCATTGGAATTAA
ATTCGCACGTAGCCAGTTGAAGAAAGGATTCGTTCATTTTGCCACTGTGT
TACCAAAAGAAACAATTCAGAAGTTCCAGAATGTTTCCGGAATAGACCAA
GATGACTGTCAGAATGTTGAAGCCACAGAAGTTGAATACAATGGTGAAGA
TAACCAACATCTTGAAAAAGAAGAGAACGAGGATATGGAAGGAGCCTTCG
ATATCGACATAAACGCCGTGCAACTTCTCGGAAAAAACCTCGGAGGACAA
TTAGACCCCCAAGAAGCTGTTTCAGGCCGCAATTTTGTTTTTCTCCCTAG
CTGTTTTAGCCAAAACAAGTTAAATGGCAGAAACGGAAGCAACGCATGTT
GCGTCATTGCTCTTTTGACAGGGTATTTTATGAGTCAACTGCCGAAAATA
TGTTTCCGTGACAGTGTGCCCCTATTTGTTGGCTGCTTGACGTAGGCAAC
AGCCTTCACGAGGAAGGCAGAAATCTCCTTGTTCAAGAGGCTATCAGTCT
GCTACCCTTTCGCATAAACGTATTTGAAGAAAGAGACTCTCTTCCGAAAA
ATGTTCAGGAAGTTTTATCAGAACTGATTTCAAAATCTGCGATCGTTATT
GCCACATGCAATCTAAAATCTGTTTGTATTGTTCGCTCGTCTGgcaatga
aaaaatatatatttttgattcCCATCGACACAACGATATGGGACCATTGA
TCGCATGGGTTGAAGACGATATTGGAGATATCATTGAATATATTCCCTTT
GCAAAGGAtgatgatcaaatatactttTGCTCTGTACAATATTGATATTA
TCTGAatttatttctcaaaattttaccACTAATTCGTTGATTAAAACGCA
AGTCGACTGGAGttgagtttagtttaaaaatgGGTTAAAGCATATTCACC
taattttcatttatatttaCTTATTTGgtatttatattattttcataacA
ACGTTCGATAAACGTTgcaacaacgttgtgtgcccgCTGGGAAAGGTGAT
ACACTtaaacgtccatataacgttagatgtaCGTTGATACAAATTAATTA
TCTTGGTCGATATTTCAAATAGCTTTCTCACCAGAAAAAATTTATAGCTA
GGTTTTTCTATAATTGGGAGAATCCGGGGGTGTATATTGTGTAGACCCCA
GTAACTCTAGTTCCTGtattattgaaatatttaaatcaaaaatgtaaaaa
tatatcTAAAATATGTAAATATTTAGCAATCATGATTTTACAATGACAAA
AAAGATAATTGAAAGACTT

Run BLAST on NCBI

protein sequence of TCONS_00065857-protein

>TCONS_00065857-protein ID=TCONS_00065857-protein|Name=TCONS_00065857-protein|organism=Clytia hemisphaerica|type=polypeptide|length=688bp
DEKENVLESLKSSIALQDCDLCQTHAVLSCHECCLELCHKCDIEIHKNKP
LHNRTLFLDGLATPIPPNEVLNENDQIYVVDRLVPLKHPKCVCGSVQFHE
STNQRKVVVITMKGKFELLQSILRCCKCERITDPFTLSNILSSGFWPSSP
THFGCLIDVDVFLTWDQFKKHMPGSSSTAFLDSLNDLTLYFGRQGRIVPS
SFYQGFKQWNFIRYELDMKKGMDWMKCPCCSIKQHACHIDGNAKLYRYQR
SGMRRRKSYYNEAFIADDKKVETFVSSLRQDMGKTIKTSSDTSCGGEWSA
ARNTERKRKSVDDTGLYVASCRHQYGLKSINMKRGEIYAYPAYLLTNFIL
PNKVEYLFTDVMCKLWPYLCKVDSNLPSKIKGALSVMHAKGHNLRCQVSW
DGEWIQGSGKSTGEECEQLFSFLSRCANTTKYQSPENREETLTEMILFWN
RRKTLVLAESLLKKFKRITKEVSIFEDKLGKKCVEMGITIKDVDFVSLLN
KLKIYASGGSVSPCKPTSHQQMILLYHDLNKTPSDASEMSKDLLQKIVLP
DLNDVHIPLLAKNKAEKELLLNNVWDNDISATKIQGELDLLRSAVLVPAF
QNAIQSCRFEMLHWNIRLKKYADSAKLRCACRLKFSEVNKKLNSLLERFI
TVKSLEDVSEFELIKESNHRCCSSLTLKKIDVLKSLNY

Run BLAST on NCBI

transcript from alignment at scaffold_447:205451..214413-

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00065857 ID=TCONS_00065857|Name=TCONS_00065857|organism=Clytia hemisphaerica|type=transcript|length=8963bp|location=Sequence derived from alignment at scaffold_447:205451..214413- (Clytia hemisphaerica)
GATGAAAAAGAAAATGTTCTGGAATCGTTAAAGTCATCTATTGCTTTGCA
AGATTGTGATTTGTGCCAGACGCATGCAGTTTTGAGCTGTCATGAATGTT
GCTTGGAGCTATGTCATAAATGTGACATAGAAATTCACAAGAACAAACCC
TTGCACAATCGTACTCTGTTTCTAGATGGCTTGGCGACACCTATACCACC
AAATGAAGTGTTAAATGAAAATGATCAAATATATGTTGTTGGTCAGTGTC
ATTTTTAAAAGCTTTTTCAAGCTAAAAAATGTTTTTTTATTATTTTGAAT
TGAAAGGTAGCGTTTAATTTTAGAAACTTGAAAGAAAAATCATGTGTGTC
CATTCCTCTTCTAAACACTTTTTTCATGCATTTTTAGATCGTCTAGTTCC
ATTGAAACATCCTAAATGTGTATGTGGCTCTGTTCAGTTTCACGAATCTA
CAAATCAAAGAAAAGTTGTGGTTATAACGATGAAAGGTAAGCAAAACTTG
ACGCCGTATTTTGTTCAATAGAGATGAATTATAAATAAAAAGAGAATTAT
AAAAAAGAAAGTATAAATAAGGATAATTAGCACTAGATTATTACATAATT
ACCTTTCTTATAAATCACCTGAGTTCGGTATAAATGGTATTTTTTCTATC
CCCATTGCTATATTATGTAATTATGGATTGCTGTTGACATTTTATAGTCA
GTTCGTTGTTTTAGGGATTTTTGCGAAAGTTTTCTATACTCTACTTAATA
TTTTAGTAATTAGATTTTTCTAACTTATGACTTATCTATTTAGGGAAATT
TGAATTGCTTCAATCTATTTTGAGATGTTGTAAGTGCGAACGTATCACTG
ACCCTTTCACTCTTTCAAATATCCTTTCATCTGGTTTTTGGCCATCCTCA
CCCACGCACTTCGGATGTTTAATAGATGTTGATGTTTTTCTAACTTGGGA
TCAATTTAAAAAACATATGCCTGGTTCCTCATCGACTGCATTTTTGGATT
CTCTAAATGATTTGACACTTTACTTTGGAAGGGTAAATATTTTTCCTTCT
TTGTCAGTGTTCTTTTTAGAATTCAACCTCGCTATTTTACTTTCTGTTAT
TATGAATTGAGATGTAGCATCTAGGTCTATAAAGNAGTTTCACGAATCTA
CAAATCAAAGAAAAGTTGTGGTTATAACGATGAAAGGTAAGCAAAACTTG
ACGCCGTATTTTGTTCAATAGAGATGAGTTATAAATAAAAAGAGAATTAT
AAAAAAGAAAGTATAAATAAGGATAATTAGCACTAGATTATTACATAATT
ACCTTTCTTATAAATCACCTGAGTTCGGTATAAATGGTATTTTTTCTATC
CCCATTGCTATATTATGTAATTATGAATTGCTGTTGACATTTTATAGTCA
GTTCGTTGTTTTAGGGATTTTTGCGAAAGTTTTCTATACTCTACTTAATA
TTTTAGTAATTAGATTTTTCTAACTTATGACTTATCTATTTAGGGAAATT
TGAATTGCTTCAATCTATTTTGAGATGTTGTAAGTGCGAACGTATCACTG
ACCCTTTCACTCTTTCAAATATCCTTTCATCTGGTTTTTGGCCATCCTCA
CCCACGCACTTCGGATGTTTAATAGATGTTGATGTTTTTCTAACTTGGGA
TCAATTTAAAAAACATATGCCTGGTTCCTCATCGACTGCATTTTTGGATT
CTCTAAATGATTTGACACTTTACTTTGGAAGGGTAAATATTTTTCCTTCT
TTGTCAGTGTTCTTTTTAGAATTCAACCTCGCTATTTTACTTTCCGTTAT
TATGAATTGAGATGTAGCATCTAGGTCTATAAAGTCTTCAATCTCCGAAA
GTTTTAAATTGTATTTCCATCAAAATAATTTGCACACATGTTTTTCTTAA
AGAATAAGGATCTGTTATATTGATACTGTAATTTTCCTGGAAAATTAACG
CATTTACTTATTACTTTTATTATGTAGCAAGGAAGAATCGTGCCTTCGTC
ATTTTATCAAGGTTTCAAACAATGGAACTTTATCCGATATGAACTAGACA
TGAAGAAAGGAATGGATTGGATGAAATGCCCATGTTGCTCAATCAAACAA
CATGCCTGCCATATAGACGGAAACGCAAAGTTGTACAGATATCAAAGATC
TGGAATGTAAGGTTTTCTACCATTTTCTTAATAAAGTCTCAACTATTATT
CAGTGGGTCAAAAATGTTGGAGGAAGCTGGGATTTCGAAGGAGAGGCTAA
GGGTTGTATATCCTAGTAGGTATTTTCTTTTAATTTCTGGCATTCAATTT
TAGTATTTCCTTAGATGTCAACTTTTATTCTTCAGGCGACGTAGGAAATC
GTATTACAACGAAGCATTTATCGCCGACGACAAAAAAGTTGAAACCTTTG
TATCTTCTCTGCGACAGGACATGGGAAAAACAATTAAGGTAAATATTTAC
ATTTTTCTCAAAGTTCTAAACTTGTGATGATTTTTCTAGCAAAGAAATAT
ACTCAAGTTAAATCTTCAAAATATAATCATCGAAAATCTTTCTTTTTTTT
TTAGTACTTTAGTACTTTACTAAGCCACTAAAGGTTGATTCCTGATGATT
ATCAAAAACTAAGCAACTTGGTAACCGACCCTGATTCCTGAACATTTCAA
TGTCGATTTCAATTAATAACGCGACATTATGGAGCAGAACAAAATCTACA
GAAATAGCACTAAAAACTGATTCTTTTTCTGATTTGTTTTTTAAGACTTC
ATCTGATACATCTTGTGGGGGTGAATGGTCAGCTGCAAGGAATACAGAAC
GGAAGAGAAAATCAGTGGACGATACTGGTCTTTACGTTGCTAGCTGTCGT
CATCAGTACGGATTGAAATCCATTAACATGAAACGAGGAGAAATTTACGC
CTATCCAGCATATTTGTTGACAAACTTCATTTTGCCAAACAAAGTGGAAT
ATTTATTTACCGATGTTATGTGCAAACTGTGGCCCTACCTTTGTAAAGTT
GATTCAAATTTGCCATCTAAAATTAAAGGAGCTTTGAGTGTGATGCATGC
CAAAGGTCACAACCTTAGATGTCAGGTACGGTTATAATTGCACTATTCCA
TGTTTTTCTATGGGAAAGAAAGCTTGTCTCTTAGTTTTCTATCAGAAGCT
CCGTATAAACTGATGCAGTCACTTTTTCATATCAGCATAAACAAAGTCGG
ATTTAAGTTGAGTGTTTTTTTATTTTTTAGGTTAGTTGGGATGGGGAATG
GATTCAAGGTAGTGGCAAGTCGACCGGAGAAGAATGTGAACAACTGTTTT
CTTTCCTTTCACGCTGTGCTAACACAACTAAATATCAGTCACCTGAAAGT
AAGATTCAATTGTATTAGTTTGTCCTAAATCAAGATGTCCACTTTGTCAG
GAAGTTGGCAGAAATTTTCAGCAGATTTAAAAAAAGGGCAAAAAGTCAGG
AAATATTGAGATTTACGGGGGCATATAGGAACGGTAACAAGTAGGCGACA
TGTCAGGAAAGTCAGCTAAAAAATGTCAGGAAAGTTTTAGCAATGTAATG
AAAAACAGGGTTAAAATTCGAATCTTTGGATAATAATCATTATTATTGAA
AGTATTTTTTAAAAGCATAAGTGAAAAAAATTGCTTTGTTTGGTTCGTCC
TTGGCAGGGGTATTAACTTAAAACATAATCTATGGAAAACTTTCTTTTTT
AGATCGAGAGGAAACTCTTACTGAAATGATATTATTCTGGAATAGAAGAA
AAACATTGGTTCTTGCTGAGAGTTTGCTGAAAAAATTTAAACGGGTATAA
AAAGTTTACTAGTCAAAAGTTTTCCAATTTGTAAAACAAAGTCTTTGAGT
CATTTGACTAAAGATGCTAAAATAATTAAAAAATATAGTATTTTCATGAC
AAACACCAAATACCAGCGTTAGTATAAAATTCATTTTATGAGGTATACCG
GGAGGGTACATTGCTATACATTTTATGAGCTATATAAATTCCTAACCTCA
TTTAATTTTCTTTTGTAGATAACTAAGGAGGTGTCTATATTCGAAGATAA
ATTGGGCAAGAAATGTGTCGAAATGGGTATTACCATCAAAGATGTAGATT
TCGTGTCCCTTCTCAACAAACTCAAGATTTATGCTAGTGGAGGTAAGCAA
CTTTACCATAATGGGCTCTTCCGGAAAAAGATTGAATATGGAGGGGTGAA
AGATATAACATTTTTTGGAAATTTAACCCGACTTTTGACCCCCGGACAGC
AGGTATAACCCCCCCCCCCGAACAAGCATCAGTTGATCCCCCGGACTTTC
AAAATTACCCCCAAACAGAGCAAGTTTACCCCCGGACAAGGCAAATGTTG
TGGATTTTTCACTACCCTAGACAATATATCATCCACCCTCATGAACGAAC
ATTTTCTGGAAGAGCCCAATATATACAAATACAAAGGCACTTTATCTACA
GTATGGTTTTGATAAATTTTTTTTTAGGAAAAGATAGGTAACAGTTGGTT
TGTCCCAGTTGTGATTTATTAAAATTGTTTCCTATGAGAAATTGCTTGCG
ACGTAGTCTTCTATTATATTCATTTTTTTGAATTATCTTTTAGGCTCTGT
ATCACCTTGTAAACCAACATCTCATCAGCAAATGATTCTTTTATATCACG
ATCTTAATAAAACTCCCTCTGATGCATCTGAAATGTCCAAAGATCTTCTC
CAGAAAATAGTACTTCCAGACTTAAATGACGTTCATATACCACTTTTGGC
GAAGAACAAAGCGGAAAAAGAGTTACTATTAAATAACGTTTGGGATAATG
ACATCTCAGCTACCAAAATCCAAGGAGAACTTGACCTCCTGAGAAGTGCT
GTCCTTGTGCCTGCTTTTCAAAATGCAATTCAAAGTTGCCGGTTTGAAAT
GTTACATTGGAATATACGATTAAAGAAATATGCAGGTTCGTAAACTATGT
ACTTGTTTTCATATTAGTTGTTTTGAGTTTTTTTCATTTTATGAATTCTA
TACAGGGTATGCACCCAAGAATGCAGGTGCACCCCAGAATTATGGCCCTC
CGAATTCCTTGTATGTTTTTTTATTTAAATTAGTTTGAAACAATCCTTCA
TGGATACATAGTATGATAACTTTACCACCAACTAAGCCATTTCTTTCAAC
TTTTTGACTCAAAGTTCGACTTTTGTGAGCTTTCTTGCAAAGTTTTGTTC
TAAAAAACATGTCATTTGAAATTGTCAAACAATTTTGTTATTGGACTTTT
TCTATTTAATATATTTAAATGGAATATGAAAATAATCATTACTTTTCTTA
CTTCCAACTTAGTGTAGAAATTTTTTAGTTACATTGCACTGCGTTTGACC
TCTGCATTCTAGAGCGCAAAAAATCAAATTTACCCATTTAAACTAGATAT
TTCCAGACCAGAATTTGCATTCTTGTTTTGCACCATGAAATAAGATCCTT
AGACGAATTCATAATTTTGTGTGCTTCAGTATAAAAGATTACATCATGAA
TATCATGAATGGGCAGGAAAACATTTTATCAGCCCAGACTTTTACCAAAA
CGACCCCAATTTTTATTTGAATGTCTATTGCTGTCTTCACAACAAAAACA
AAATTTACCAGCATTCTGGGATGCAAACCCTGTATGTACCTCACAAATTA
AAACGTTTCTTTCTTTAAAGTGAAATTTTTTTATATTGTAAAAGGGTAAC
GAAGAAGAAGGTTCGAATTATAGCAAATATTTTTTTTCAGATTCTGCAAA
GCTCAGATGTGCTTGTCGATTGAAGTTTAGCGAAGTAAACAAAAAGCTAA
ACTCCCTACTCGAACGTTTCATTACAGTCAAATCTTTGGAAGACGTTAGC
GAGTTTGAATTGATCAAAGGTAAGAAAATCTTATTTGTGTATATTTGTGT
TACCTTTAAGGGGAAAAATTTTCGCGGAATTTATTTATGCGAATGAAGGG
AATTGCGATTCCAAAATAGGCCAGTTTTGCCTTAAAGGGACCAAATGTAG
GGTCGATTTTTAAATACTGAGAAAAATAATGTCGCAAAATGAAATTCCAG
GCAATTTTCCTTTGCGAAAATCTCTCCACGAAATTTTTTATTTCTTATCG
TATTGGCCTGAGACATTATCGAATACACCCTTCTCGAGATGCATAAATTT
ATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTATAAAATTACAGTTT
CACAACAACAATTGTGTTGTTTACACCTCATGAGACATTTTGAATTTCAA
GTACTTCTGTTTTAGAGTTAATGTTTGCCTTTTGGGAATTTAAATTGGTC
TAAATGTATGATTTCATAACAATGAAATCTGTTTGAAAACGAGGACAACA
ATAAATTTATGCATCTCGAGAAGAGTGTATTGCAACCGTTTTTTTTTTAA
AGAACGTATACGTTTGAAAACGAGATTATCAAAACATCTTACTTGCTATG
CGTGTGAAATGGCCATTTTCCGCGCGGGATGAATTCGTAGCTCGAGGATG
TTTGCTCAATTACATGACAAGGCATGTGATTTTGAAATTTGGGGTGTTTT
TTAGCCATTGTACATCCATTAAAAAACTTTGAACAAAATATTTAACCCCA
GAAATGGCCATTTTACAGGCGTTGAATTTTTCGGGTGTGTTCATTAGCCA
TTTCACACGCATGGCATTTTTTGGGGTTGGAAAATAGCTCTTTTATATGC
ACGGATTTTAAACATTTCATTCTTCTGAAAAAGTAAAACTCACCCCGAAA
ATGACAATGGATTGTCTTTTGCTTATCATTTGATGAAGAATTGGCAGTAT
ATCTTCTGAAAGGCTGAAGCAAATATGAATGATAGCCCGGAATTCAAGTT
CGTCTTTTCTCTACCTAATGGTTGTTCAGAAATATTTAGACTTGAATCGT
TTACACTCTTTATTGAGGTTGAATTGAATATTCGGCAATCAAAGTTTTAT
CTTTTTGTTTAGTATTCGCAGATTTTATGATTTAAGAAACTAATTTTTAA
TGCTTTTGACTTTTGCTTTTACAGAATCCAACCACCGTTGTTGCTCGAGT
TTAACGCTAAAAAAGATAGATGTCTTGAAGAGCTTGAATTATTGAAAAGG
GATATGGAATCGTATCTAACATTCTACACGTCCAAGATCACAACAGAGTT
GAAAATTGATCACCTTGCAAGTTCTGATTCTGAAAGGGTAATTTTTATTT
CACTTAGTAGTATAAATTAGTATAAGTAGTATAAATTTTATGGGTGCTTC
AATTGAAACCTAAAATGAATACTTACTCTAGCATTTCAGAATTAGCAAAA
TTGATTAAGTCCTTATTGGAAAGTAAATCAGTGGTCATGGTGTTACCATG
GACTTTTTAGACACTGGATAAACAACAATCTGAGTTTTCACGATTTTTCG
ATTTGTCCACAGTAACGATATTTTTATTTCTTCGAGCCGTCCTTTGCGGA
CAAATCTCGTTCGTCAATTGTTTTTGTAACACATTAGAAATATAATGCTA
TGCTCTCCACGCGTTATTTATCCAGTGACCTTTAATAATACTATGGTATT
ATCCACCCATTTATTCTTTAAATAGACTGTCTTCTCTGTTCTCGCATTCG
CTATCTAAAAAAATTAAAATTTCAATATTCTCACTCAATCAATTTAACTT
TAGGACAATGCCGCTGATACAGTCCTTAAACGCATTGGAATTAAATTCGC
ACGTAGCCAGTTGAAGAAAGGATTCGTTCATTTTGCCACTGTGTTACCAA
AAGAAACAATTCAGAAGTTCCAGAATGTTTCCGGAATAGACCAAGATGAC
TGTCAGAATGTTGAAGCCACAGAAGTTGAATACAATGGTGAAGATAACCA
ACATCTTGAAAAAGAAGAGAACGAGGATATGGAAGGAGCCTTCGATATCG
ACATAAACGCCGTGCAACTTCTCGGAAAAAACCTCGGAGGACAATTAGAC
CCCCAAGAAGCTGTTTCAGGCCGCAATTTTGTTTTTCTCCCTAGCTGTTT
TAGCCAAAACAAGTTAAATGGCAGAAACGGAAGCAACGCATGTTGCGTCA
TTGCTCTTTTGACAGGGTATTTTATGAGTCAACTGCCGAAAATATGTTTC
CGTGACAGTGTGCCCCTATTTGTTGGCTGCTTGACGTAGGCAACAGCCTT
CACGAGGAAGGCAGAAATCTCCTTGTTCAAGAGGCTATCAGTCTGCTACC
CTTTCGCATAAACGTATTTGAAGAAAGAGACTCTCTTCCGAAAAATGTTC
AGGAAGTTTTATCAGAACTGATTTCAAAATCTGCGATCGTTATTGCCACA
TGCAATCTAAAATCTGTTTGTATTGTTCGCTCGTCTGGCAATGAAAAAAT
ATATATTTTTGATTCCCATCGACACAACGATATGGGACCATTGATCGCAT
GGGTTGAAGACGATATTGGAGATATCATTGAATATATTCCCTTTGCAAAG
GATGATGATCAAATATACTTTTGCTCTGTACAATATTGATATTATCTGAA
TTTATTTCTCAAAATTTTACCACTAATTCGTTGATTAAAACGCAAGTCGA
CTGGAGTTGAGTTTAGTTTAAAAATGGGTTAAAGCATATTCACCTAATTT
TCATTTATATTTACTTATTTGGTATTTATATTATTTTCATAACAACGTTC
GATAAACGTTGCAACAACGTTGTGTGCCCGCTGGGAAAGGTGATACACTT
AAACGTCCATATAACGTTAGATGTACGTTGATACAAATTAATTATCTTGG
TCGATATTTCAAATAGCTTTCTCACCAGAAAAAATTTATAGCTAGGTTTT
TCTATAATTGGGAGAATCCGGGGGTGTATATTGTGTAGACCCCAGTAACT
CTAGTTCCTGTATTATTGAAATATTTAAATCAAAAATGTAAAAATATATC
TAAAATATGTAAATATTTAGCAATCATGATTTTACAATGACAAAAAAGAT
AATTGAAAGACTT

Coding sequence (CDS) from alignment at scaffold_447:205451..214413-

>TCONS_00065857 ID=TCONS_00065857|Name=TCONS_00065857|organism=Clytia hemisphaerica|type=CDS|length=2067bp|location=Sequence derived from alignment at scaffold_447:205451..214413- (Clytia hemisphaerica)
GATGAAAAAGAAAATGTTCTGGAATCGTTAAAGTCATCTATTGCTTTGCA
AGATTGTGATTTGTGCCAGACGCATGCAGTTTTGAGCTGTCATGAATGTT
GCTTGGAGCTATGTCATAAATGTGACATAGAAATTCACAAGAACAAACCC
TTGCACAATCGTACTCTGTTTCTAGATGGCTTGGCGACACCTATACCACC
AAATGAAGTGTTAAATGAAAATGATCAAATATATGTTGTTGATCGTCTAG
TTCCATTGAAACATCCTAAATGTGTATGTGGCTCTGTTCAGTTTCACGAA
TCTACAAATCAAAGAAAAGTTGTGGTTATAACGATGAAAGGGAAATTTGA
ATTGCTTCAATCTATTTTGAGATGTTGTAAGTGCGAACGTATCACTGACC
CTTTCACTCTTTCAAATATCCTTTCATCTGGTTTTTGGCCATCCTCACCC
ACGCACTTCGGATGTTTAATAGATGTTGATGTTTTTCTAACTTGGGATCA
ATTTAAAAAACATATGCCTGGTTCCTCATCGACTGCATTTTTGGATTCTC
TAAATGATTTGACACTTTACTTTGGAAGGCAAGGAAGAATCGTGCCTTCG
TCATTTTATCAAGGTTTCAAACAATGGAACTTTATCCGATATGAACTAGA
CATGAAGAAAGGAATGGATTGGATGAAATGCCCATGTTGCTCAATCAAAC
AACATGCCTGCCATATAGACGGAAACGCAAAGTTGTACAGATATCAAAGA
TCTGGAATGCGACGTAGGAAATCGTATTACAACGAAGCATTTATCGCCGA
CGACAAAAAAGTTGAAACCTTTGTATCTTCTCTGCGACAGGACATGGGAA
AAACAATTAAGACTTCATCTGATACATCTTGTGGGGGTGAATGGTCAGCT
GCAAGGAATACAGAACGGAAGAGAAAATCAGTGGACGATACTGGTCTTTA
CGTTGCTAGCTGTCGTCATCAGTACGGATTGAAATCCATTAACATGAAAC
GAGGAGAAATTTACGCCTATCCAGCATATTTGTTGACAAACTTCATTTTG
CCAAACAAAGTGGAATATTTATTTACCGATGTTATGTGCAAACTGTGGCC
CTACCTTTGTAAAGTTGATTCAAATTTGCCATCTAAAATTAAAGGAGCTT
TGAGTGTGATGCATGCCAAAGGTCACAACCTTAGATGTCAGGTTAGTTGG
GATGGGGAATGGATTCAAGGTAGTGGCAAGTCGACCGGAGAAGAATGTGA
ACAACTGTTTTCTTTCCTTTCACGCTGTGCTAACACAACTAAATATCAGT
CACCTGAAAATCGAGAGGAAACTCTTACTGAAATGATATTATTCTGGAAT
AGAAGAAAAACATTGGTTCTTGCTGAGAGTTTGCTGAAAAAATTTAAACG
GATAACTAAGGAGGTGTCTATATTCGAAGATAAATTGGGCAAGAAATGTG
TCGAAATGGGTATTACCATCAAAGATGTAGATTTCGTGTCCCTTCTCAAC
AAACTCAAGATTTATGCTAGTGGAGGCTCTGTATCACCTTGTAAACCAAC
ATCTCATCAGCAAATGATTCTTTTATATCACGATCTTAATAAAACTCCCT
CTGATGCATCTGAAATGTCCAAAGATCTTCTCCAGAAAATAGTACTTCCA
GACTTAAATGACGTTCATATACCACTTTTGGCGAAGAACAAAGCGGAAAA
AGAGTTACTATTAAATAACGTTTGGGATAATGACATCTCAGCTACCAAAA
TCCAAGGAGAACTTGACCTCCTGAGAAGTGCTGTCCTTGTGCCTGCTTTT
CAAAATGCAATTCAAAGTTGCCGGTTTGAAATGTTACATTGGAATATACG
ATTAAAGAAATATGCAGATTCTGCAAAGCTCAGATGTGCTTGTCGATTGA
AGTTTAGCGAAGTAAACAAAAAGCTAAACTCCCTACTCGAACGTTTCATT
ACAGTCAAATCTTTGGAAGACGTTAGCGAGTTTGAATTGATCAAAGAATC
CAACCACCGTTGTTGCTCGAGTTTAACGCTAAAAAAGATAGATGTCTTGA
AGAGCTTGAATTATTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041256	XLOC_041256	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00065857-protein	TCONS_00065857-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_447	supercontig	scaffold_447:205451..214413 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.729144	0.784277	0.177326	0.087278	2.61734	1.48444	1.66499	1.45173	1.39359	1.41688	1.21938	1.71259	1.30031	1.0207	2.12986	2.28959	2.076	2.77522	1.25417	1.56701	2.7548	3.24643	1.21608	1.96778	0.035053	0.020856	1.64146	1.40773	1.08787	1.20605

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00065857 vs. Swiss-Prot (Human)

BLAST of TCONS_00065857 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00065857 (transcript) - C. hemisphaerica