TCONS_00065904 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065904
Unique NameTCONS_00065904
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065904 ID=TCONS_00065904|Name=TCONS_00065904|organism=Clytia hemisphaerica|type=transcript|length=3120bp
GCGAGGAGAAAGTACTGGCGTTACTATaaaatGTCTAGACCAAACTCAAC
AGTACTTCATCACGCAATAGCAACGGGCGATTTAGAGACCGTTCAAAGCC
TCTTAAAACAAGGTGTTGTGGACGCTGACACGAGACTACAGGTTGACGAA
GAGATTCTAGAGACGGCAAGTCGTAAAAGTTACACGTCCATCCGAAGCTA
TCGACAACAAAGTATGGCTAACGAAAACATTGCCGAAGAAAATGAAAGCG
AACTCACAACAATTGATGACCAGGAGGAAGAGAACAAATCTAGTGAAACT
GGAAATCATGATAACACATCCAGCAGTACATCCAGTGAACTTGAAACTGA
CGAATTTAAATCCAGTGAACTGAGAAGCGAGAATATTGAATCCACTGAAA
TAGATTTGGAGTTTAAAACGGCATCCATTGAAATTGACGATGAAGAAAAA
GacagtgaaaatgaaattgaaaaaattatggAAGAATGccaacacgaggc
tgaaatcgaaaacGTAGTTCCAGAAGAAGAGACCCCTATTGAAGATAGAT
ACCTTAAAGCACAACCCATTGTGGGTATATCTACACCTCAAGACGAGGCT
GAAATAATAGTCCAAGATGATTTGGTAGAAGACCGACTGCAGCCTGTGCT
CCAACGATTGCGAGAGCCAGACATGGAAAGCTGTCAAAGCGGCTCATCGA
CACCCTTATTGAACAATAACAGAGGATCACTCGCCGATGTGATTGACTTG
AAACTGAGAGACGATAATGAGGGTTTGTTTGAGCGAGCGCCTTCGATGAG
AGTAAATCCGATGAGTGAAGAAGGAGGTGCACCAAAGAAGTTGATTCCAA
GGTTCGANGAAACTGAGAGACGATAATGAGGGTTTGTTTGAGCGAGCGCC
TTCGATGAGAGTAAATCCGATGAGAGTAAATCCGATGAGTGAAGAAGGGA
GTGCACCAAAGAAGTTGATTCCAAGGTTGAAAAGGAAGATCTCGTTGAAG
TTCAACAAGAAACCAAAAAGAGACCTCTTggatgaagatgatgatgacGA
CTTGATTTATGAGAATCTGGTCAAAACAAAGAACGTCGATGACGCACAGc
TTGACGAGAATTTCGAAGGTGTGGCTTTCTTCGAAGCAGTCCGTGACGGT
ATGGATATGATAGTCCAAACATTGTTGGAAACCAGCGATAATTACCAACT
CAACATGTTGGATGAGAACGGATTCACACCGGCAATGAATGCCGCATGGC
ACGGACAAGCAGACTGCTTACAAATCTTAATCAAGCACGGTGCGAATACA
GACCTCCGAACGGCTACCGGCTGTACCGCAGCACATTTTGCCGCCGGACA
AGGTAATGCAGAATGCCTTCAACTCCTGATCGACGATGATAAAGATCAGA
TAGATATTAAAACAAAATTCGGAGCAACGCCCTTGATTTTATCCGCCAAG
GGCGGCCATAACGAATGTATGGAGATTCTCCTTGATGCAGGTGCGGATGC
AAACGTTCAGTACCGGGGAAAACAGAATGCGGTACTGTTCGCAGCCGGAA
ACGGACATTATGAATGTCTCGAAACACTAATCGAGCATGAAGTTAATCTG
AATCAAACTAATTCCCAAAAAGTAACGCCCTTAATGAGGGCGGTCCAACA
AGGTCATAATACGTGTGTGGTGTTACTTACCGATAAGGGCGCCGATATTA
ATCTGCAAGATGCGATCGGGCGGTCCGCCCTACATTTCGCAGTCGAATAT
AACAACTCGAAGGGACTAAAATTGTTGTTACAACAGGGTGCAAATGTGGA
TTTAAAAACGAAAGGTGGTTCGAAGCCGCTCGATTATGCTGAGCGTTTTC
AAAACACTCGCCTTGGAGAAATGATTGAAAATCATATTAACAAGCTCAGG
GAAGAAGtcgaaaaggaaaaagaaattgaagtaCAAAAACAAATCGTCGA
AGAGAAAGAGAACAAAGTTTCCTGTCTAAGTTTCAAACATATATTTAGGC
GCCGAAGTCGCAAAAATTCGGACGTTCAAAAAGCTGTATAACAAATAGAG
GGGACCAATCTATATAGTATAGCAATATTGCAACGTAATATCTTGTATGT
GATGGAAGGAGATTTGCTTTCTGTGGCCCTTATGAGGGAAAAATGTTCTC
GAGATGGGCACCAATAGGCGTTGAACCGAAACATCAAGCTGCTTTGATAA
ACACAAATCTCACAAACAAAAAAGATAGTAAGACCATGTTccgacgttac
ggttccgttccgctccgaaacgaaacagTTCCGAAACAAGTTTGAACATc
gaaattcgaaacgtcaaaaagaagactttacacagtaaaacagatcgaaa
cggtttcacTCCACtaatcggaacggaactgctccattttcttgctccga
aacgttcctaaactaatatgaacactctcgatccgtaacgaaaattaCAC
tagagcgaaacggaaccgtaatGGCTGAACAGGGTCTAAGCAATCAAATA
TTGAAAAGATAGTCCTTTGAAATTGGCAATGATGTAAAAAAGGAGAGAAT
CGTTTTCTGATGATATCTTATCATAAACTTGAGAGCACTTGTAGTAAAGA
AAACAAGGTGAGCGGATGTTCGGCGTCGAAAGATAAACAACAAACACTGT
GATAATCGTTCCATAAAAGAGGGTGATACCTTATCATATGCCAAAGAACA
CATTGAATCCTAATATGAGATTGAATTACCTCATAACTCGTGTATATAAT
ACCAAACATTGAATAATATGGATATAACAGGATCTTTGCTATGTTGTAAC
GCTCTGAACATTAGAGTAGTTTGTAGTGATATAATACGGATAAAATAAGA
TCTTTGCTATGTTGTAACGCTCTGAACATTAGAGTAGTTGTAGTGGCATC
TTAACAACTCGTTACTAGGCTATTTTGCGAATAATTTTAATTAAACTTTT
ATTATGGAGGGCTCCAATTCGTTTTTAAAAGAGCGAAATTATTAccttat
attatattatatgtGTATATTCTTAATTCTATGAaattaatcttaaaatt
tctagtatccaagaagaaaaaaatctcatggGCCCCGGCGACCAGTTTGA
AGTAAGGGGGGAAATATTGG
Run BLAST on NCBI

transcript from alignment at scaffold_448:320710..335960+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065904 ID=TCONS_00065904|Name=TCONS_00065904|organism=Clytia hemisphaerica|type=transcript|length=15251bp|location=Sequence derived from alignment at scaffold_448:320710..335960+ (Clytia hemisphaerica)
GCGAGGAGAAAGTACTGGCGTTACTATGTAAgttgataatattttttttt
taaagggaaagatacaagatttggaaaactttgaaTTGGGTGGGTACCCC
TCCTATTGGGTTATAAACAGTTAGCCTAACCTGTGTGGTTTGTTCGCCCg
tatttttttgtgataaacaaagaggaatgaatccatacagtcactttcgg
tcgtgGTTGTGAACGGCAAAATTTGTCGtcctttatgaaatttgtcgttc
tttttgtctatttttagtaatacagGATTTGTTAGATAAAACTCCTCAAT
TTTGTTAATATATATTGTAATATATATTTTGGTAATATCGAGGTATTTAA
CAGCAGAAGTATTAATCGGTCTTAATTTGTGATTACATTTTTGAGACtca
gtgttcttataaaagtatTCTTATAACAAATGAGTGTAATTATTTTAAGA
CCTTGTCAAAGTCGTTCAAGTCTCAAACCTTTGAAGAGAAcaaccctgtg
tcacagactcaCTGGGACCCCAACCACACTGGAAAGTTTGGCAACAATTT
CGTCTCCGGTGGGAACCGGAGTAATTATAAACCCTGTAATTTAGCCCCAC
Tgggatgactttgatttcatccctactcgaaattccatgtttaaaaattg
cactccaaaaccatcccagcTGGATTTttaaaccttggaacaatatgaTT
TCTATCACCCTTGGGATttaaataggaatttttatccccactgaggaaaa
cagcagggctgtgagacaggggtgaaagAGATAAATACTCAAGGACTCAA
ACCGAGAGAAATAGTTGTTGCTAATTTTATTCTATTATAATCTTTCAAAG
TTAGATTTTAGGAAATATGCTTGTGTACACCACATATGGTAGGTAAAGAG
GGTGCacacattttaaagctttagtttttttaaataagagtgatatcgtt
tgcttattcattatttttaatttacgaGCTTTTTCTCATTGgtttgacac
ggatgtggagcaagattggtccgaaaatatattatatcagcataatttaa
caataggtagacactgtcctgatatgaaatgtgtgtctgatatgaaacgg
gaacacttatgtaaaaatagacTTCAGCCCAAGTCAGAACTAACAATAAA
GTGAACTGAAAAACCGAAATGCTAATTATGAACCACGAAACCGCAAAAAG
AAGTTCCCTTTTTTCAAAGCTGAAGCAACTGCCGTTCAAAGCTGACTTCg
gactacatgttttttataagagccttCGGATcttctaaatttttttgagt
tacatgcctgaaaatgttcttaaaatgttcttaaaatgttcttaaaatgt
tcttaaaatgttcttaaaatgttcttaaaatgttcttatcttcaCTATTT
TGACAGTACCTTTCTGCGATATTATAAGAAATTAGGTGTTCCACGAagct
taaaaaatgttcttaaatgtgtTTGACATACAATCGAACCTTTATGTTCt
catattttgttcttataaaaaacgtatatttgTTGTGTACAAAGAAAGTA
TGGGGAGATGCAAGAGACGAAGTGAGTCAAAAAGTGTTGATTTTAAAATG
GTATTATGAAGAGATTACAAATTGTGAGGGTGATATTTGTTGACTGAGAA
ATCGTCATCAATCGCatcaataataaaataaatacaTTTTCTATTTCTTA
TTAAAAAGATTACCGAGAAATGATTTCAGACTATTACTCGCTTTAGACTA
GATTCTCTTAAAGTATCGTCTCCATAAACGCAAACACTCTCAAGTTAACC
CTATTCGTCCTAGGAGGGGGGCTGTTTCTATTCGGAGGTCAGATTactgg
taatagctcctgaaataatagagcttttgccatgaaattttctgtaaatt
cctaacttttatttagcttcaaaataaataaaaaaattgaaacctaAAAA
TCTTCACACCTTGTGCATGATAACATTTCTGACAGtataaggtgtcacaa
aaattgacacttttccaataaaaatttatttttaatgtcaaatatatcgt
ttaaaccgtaatttattgaatatttaggataaaataagcattttagactc
aggcaacttttttctaaagcctttgttagagtacaatagctatttaaaag
aacaaaggaaattctcggttttgctcactttgggcatgatgagtgacgtc
atcataaagattttttgttaaaagttgcCTTATgggacaaggatcttgtg
tgccaaatttcatccaaaaagacccactagatcaaaagttatggggtGGT
Acgggaaaagcccccccccccctttttcccccccccccccaaccccgggg
ggggggggggaaaagcccccccccccccattttttcccccccccccccaa
ccccggggggggggggggaaaagcccccccccccctagttttgaaccgcc
cctaaaagcctaggttgaatagggttaaggagATTTCGAGTATGGAGTAA
GGCATTGTTAATTAAAGCTTGTCCGAGGTAAGGAGAGAATGCCTGAATCA
TCTTATATCTGTCATATTTGAACCCTTATAAATGGAGTCGAGTTCCTTAT
ACGGTTTGATAGAGGCCTGCGATTCAGAGTAGACTCCTTATAATTCAAAC
TCACTATAATCCGAACAAATTTACGTTTCGTGCGAGAGTTCGAGCTGCAG
AGATCGTAAATTTGTTTGTCTCTCAGTATCTTAAAAGTTTTTGTATGAAA
GCCTCTTTTGAGAATCGCATTTCTAAAAGTAAATCATGTCTTTATCAGAC
ATGTCATAATCTCTTTGTCAAACATTGAGGAGGGGTTGAAGTTTGTACCT
TTCTAAAAAGGAACCATCTATGACGTAATGTTTGTTTACGTTGTAATGAT
TAACCTTTCGCAGTTTTAGCTAGTTAGTGACAAATACATGAGTTTTaata
attaaaacaaaatttttttcttgggctttcttcatttcttgtGGTATGCT
TGCTGTCTTGAATGTGGATTTCTTGAGATCAGCGTAACCTCTACTTTAAA
CTCAGAGACCTTTCATAATTTCAGCTATAGAGtgtcaaataatatttttt
cacgAGCCTATTCTTTAAATTCTTTCTTATAAATTTGGTCTCTTGTCTTA
AATGTGGATTTCTGGAGTAAGCGGCATCTCTATTTTTGGCTTAGAGGCCT
TTAGAGCTTTCACACTTTCAGCTACAGAGTGACAAATAAGAGATTTAAAA
TATCGTTTTCAGTTTTCTTTGATATTTCTATAGGTTATAGGTATGTTGTC
TTGAGTTTGGACTTCTGGAGACAGCGAAACATCTACCTTTGGCTTAGAGG
CCTTTAGAGCTTCCACAGTTTCAGCTAAAGAGTGACAATTCGAttgtttt
tagcttttttcaaatttttcctgGTCTGTTGAAAGGAGAAAGTGAAACCT
ATGCTTTAGAGTTTTGGAATTTCCGTAGAGTTTTTTTCTTATCGATTCTA
ACTGGAGATGGTAAACGTTCGGTTTATTTAACATACAGTCATGcttgaat
gaaaaatatttttacgaaATCAAACCATGTGTCTATCAGATGTTTCAGAG
GGTACAATATAATGCTGGAACTATTTATAAAATTTCCCCCTTTGTTTGAC
GATTTCGAGGAGCCAGTTCATACTAACAAAGTCTTTGTGCGGCAGCTTCA
TTTTTAAAACTACAAATAGAGGATAGTAACTAATCTCCATCTTAGAGGTC
ATCCTTGACTAGAAAAATTTAAGAGCTCTTGCTGCCTGTGTCAGTCTGGT
TGGTGAAGTGAAATTTATGTTTATAAATGTTAGAgcgtccaaatttttga
agccttctgacgttcttaacttttagGGTTTCAagcccaaaaatgttttt
aacttcaCCATTTTACGAGTATTGAATCCAGCccattgtttgtttttaaa
ccGAATATTTTTAGAGATCTGTCAATGAATTTcactttcaatctggcgtt
tgtgttaAAGCCAGAAGTTTGGGATGGCacataagtggcttcatttccca
tccaagaatTTCGAATCTAACCCATTCAGGGCagaacacgttttttttat
aagaatactttatacgaatattcatgatgaaattggccaaaaaactaaga
atatgctatgAATTacatcatcatggaatttgaCAACTGAACCTAAAAAT
GCCAAATCTTTGCTCgaggtatgtattacatgctAGAATTTGGTTACGTT
GGATCCTAACATAGGAATAtaataataagaatattttagggcGATTTTCC
CCAATCCATCATGAATtgaaaacaccattcttataaaaagaaaagcgtaT
AGAAGGTTGGAAAGCTCCCAGGAGAAGAGTGAGGGGGATTAGTGACAGCT
AACGTACCAGTCACACGCGATCGAAAGGGgatcaaaaaaaagaaagaaaa
ggcgaaaattaatcaacatttcattgtaaaaaaatgaatttatatATCAT
GAAAACGTTtctaattttggattttttctgaGAAGGAAGGACACAGGTTT
TTTGAATGTGTGTGTGAGTCAACCAAGCCATAGATATTGAATTGGGGAat
cagtttttgattttttgaattttttgaccgTTTAGTGATAAAAAGATTCA
AGATGGTTGTTGTAATAAGGTAAGAAAATTGGATCCATTGAAATAAACGA
AGATATGATTTTAAATGTGACTTCTTTATAGGCACCACTAGCGGAAACAA
AATAGACTCAATTTATAACAGTTATATTAAATTGGcttaaatatgatttt
taatactgtaaatttgaaaatcttgacAAACTCGCGTTTTTTTTGTGGAC
TTTAAAACCACCAGAAAAAATAGTATTCTGTCTGCATATGTTTTGAACAA
AGATCGAAAACATGAGAATCCTCAATAGTGGTCAAATTGGTATAATGTCC
CATTTAACAAACAATCTACGACAATTGTTGATGAGTTTGAACTATTGCCA
ATATTTTGAGCcacttaaaaatcaaaacaaatgctaTAAAATGGTACCTT
atgacaaaatcaaaacaaaaaaagaggCAGCGGCCACTCAAATTAGAAAT
TGTTGATATTAGGCCAGCTCTTGCGTTGCGACGAAAAACACGTCAGCAGA
AAATCGTCAATTGACGTCAGAAACGCCCTTTTGTTTAGACGTTctatatt
ttaaattatttccTTTGTAAGTGATGaattgaattgttttgtttcgACAT
CAGAACTTTTGAGTTTTGGTTTTCATGGATTGAAATACNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTTTGGGCCTAAATccgc
aaaaaccgcaaaatttagttcccgcaaaaattagttcccttaaggtatat
gaTTTTAGCAGATATATTGAATCTTTTAATTTGTGACAAAATCGGAAATG
TAAGAGTTTAAgaagaataaaataaatttagctTCGGGTAAGAAAATGAC
ACATATAGAGTGATTGAGGTCAGGTTGCTTAAATTTAATCTAACATAAAT
GGAAAGTTTATAAATCTTATTGTTAGCTGTTCGTTGATTGAAATGTTCGt
tgattgaaataatttttgtaagaATAATCTCATAAGAACAGCTAAGACTA
GACAGACACAAACACAAATAGTTAGAGATTTAAATAGTCGAATACCTAAG
TAAATAACTCTTGCCAGTAAAACCTAGGAAGCGAGTTAGGTCATACtgtc
aaaaaattataaaagacGAACTTCCAAACTAGCTAAAAATTATGACATAG
TTCTTAGGGAAAACTTtgtttaggggtcaattttcatTACATTGTCAACA
TTTAATCACAAACAGATAAACACGAACATAAAAAAGGAGATTTTTGACAG
AATTGTCAGGACTGTGAAAGGGACACGTAAAAAATACCTAAATGCGAGGA
GAAATGGTAGAGGAGCTAATTTAGCCGGCATTAACAACAAGTAATTGTTT
ATACGATTCTTTTGATTTAACAGCAGTTTAAGAACAGTTTAGAGGTCTAG
AATGACAAAAGGGGCTAAAAGTAGTGAAAATCAGGTATAAAGGCAAACCT
ACCATCTCTAGTTCttttcctaaaaataagaacaggataggGTCAATTTG
AGGTTTAGAGGGCCAAAAGAGTAAGACCTGAGCCTCGACGTACacgatga
aaatattttaaaacaaaaaaaggtCACATAATTAAGTCAAATGACTCTTA
CGAAGGCTCCCTATCTGAGGCAAGCTTAAAAGGAAGGATTGTCAATTTAC
TGGTAATATAACAAAATGTTTTAATCTCTcttcttttgatattttgttac
CTCATAATGGAAAAAAcacttgaaaaatgaaagtttatCAAAATGGTTTT
TTCATGGCTTGGTTTACATTAGGGAAAATCTAACTCTATAAAATGATTTA
ACAAAAGCATCTATAAAATTATGGAAACAGAAGGACTCATCTCCAGAGAG
ATATTTACGGCTCTTAAAGGTAAGGGtttttcaagaaagaaaaagcaCCG
TGAAAGCACCGTAAAAGTAGCGTTTTATAGTAAATTAGATCAAATAAACT
TGTGCCGCTTAAAGAAACTTTTGCTTCAAAAAGGTGAGAGGCCTGAACCA
CAgtcctcgttttcggggattggcgggttcaacctaaatttttcagaatt
gcGCGGAAGGGTATTCTATAATTCCTCTCTaatgggaaattggcccactC
CTTTTAGAGCTTTAACGTAAACATTCATCAACTTGGCATCGGAATACTAG
ATAATCTGTAATTCAGACTAAATACCGCAGCATGCTAGAAAAGAAAGTGA
TAACCACAATGTCACAAGGTTACTTACAAACttaaatgcctcgaaaatga
actaaaacttttatttcaaaaacatacaaaattttgttgattttaaaacC
CTATTTACACTAAAGAGGTATTGACGCGATGTGAATCAGCAAACAATAGA
AGCCTCTTACCCAATCggaaatagttctttttatgtCATCTTTGTTTATC
CAACTCGAGTGGTCATTGCACAAAAGAACATTCTATAGAAATTAATGTCT
TGTGAACTGATATTTTCTCgcctcattttgaaatttatgtTTTCGTTAGT
CGGACGGTTGGTTGTTTTGCGATAGTAATTTTGACAAGATCACTTTTTGT
ACTAAAGGtgttgtaatttttttgttcgGTGTATAAAACGAGTCAAAAAT
TTACCATTCTGTTTTAGGTCTAATAGCATTTAAACTGCTTgtaactttgg
atttttatcggaTAGGTATTATTGATTGGTTAGCTTTGTTGCTTCATGCT
GGATTATGATCTTACATTgaatttttatctgttttcgTAAACGTTGTCTG
TCGTCCGAAAGTCGctttatacagttgacgctctcaaaatcgattttcaa
ggggattGGATTTTCATCTCTAATAGAAGAGCGTCCTTtacgagagtttc
ttgttgacggtgactttcaaaaTTATCGAATTATGGAATGTATGGAATag
taaaaagtcaaattttagaaaacctTTAACTGTAGTTTCTTGTTTTCGAT
AATATTCAAAGATGATGTCATTTTTATCGCATATCTACCACAATTTGAAT
TTACcatgaaatattttgctattttttcttgTCTAACTTCATTCAAacgt
aaaaaaaataatcaaatttcagaaagtTTACGGTAATCTTTTGAGGAATT
ACTAATTCTTAGACAAACGCAAAGAGTCAGTTTCAGATCAAAAGATTCAA
CTGATGAAGCTTTATATTCCATGATTTTGGCAAGTTTTGAAAGAGTTGTA
GTTCGTGCACTGGCATTGAATTTTGATATGTTAGTCGACATTCAGTCGAG
TCAGTAGGTCAAGATAATGAGAGGGTTAGGTGGCGAGAAATGCCTTTCAC
AGCAAAGAATCGTTGTATTTTATAAAGTTCAATTTTCATGAACCTATCCG
AGAAAAGCTAGAGTGTTTTAGAGGACATCATTCAACGTctctcctaccat
ttgcttacacagcatttttaaaacaaaagaaagaacatcGTTCTCCCATT
TCACAGCACAAAGTTAAAGGGCATTCTCTTTAAAAGACATCATTTAACGT
ATCTCCtatcatttgcttacacagcatttttaaaacaaaagaaagaacat
cGTTCTCCCATTTCACAGCACAAAGTTAAAGGGCATTCTCTTTAAAAGAC
ATCATTTAACGTATCTCCtatcatttgcttacacagcatttttaaaacaa
aagaaagaacatcGTTCTCCCATTTCACAGCACAAAGTTAAAGGGCATTC
TCTTTAAAAGACATCATTTAACGTATCTCCtatcatttgcttacacagca
tttttaaaacaaaagaaagaacattgTTCTCCCATTTCACAGCACAAAGT
TAAAGGGCATTCTCTTCAAAAGACATCATTTAacgtatctcctaccattt
gcttacacagcatttttaaaacaaaagaaagaacattgTTCTCACATTTC
ACAGCACAAAGTTAAAGGGCATTCTCTTCAAAAGACATCATTTAacgtat
ctcctaccatttgcttacacagcatttttaaaacaaaagaaagaacattg
TTCTCACATTTCACAGCACAAAGTTAAAGGGCATTCTCTTCAAAAGACAT
CATTTAacgtatctcctaccatttgcttacacagcatttttaaaacaaaa
gaaagaacattgTTCTCACATTTCACAGCACAAAGTTAAAGGGCATTCTC
TTCAAAAGACATCATTCAACGTctctcctaccatttgcttacacagcatt
ttttaaacaaaagaaagaataaCTTTATCCACTTCCCGCACCACTCGCAT
AAATTTTGAGGAATTCTGCTTTATCAGTACATGGGCCTCagcgagccatt
ttgagtgagggggccaacattttggaaaacaatgtcggccaccatggttg
ggcaacgaagcaaatttttcactttttacaccctcaaaacactttaaaac
gatatctaattggggagaatagtagtttttgtggtttgatttgatctcaa
accagcttaaaatagtaactcttaaaaacgtatgacatggtCTACCAAAA
AATGGAGGGGCCATGGACCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNgcccccccccccccgttgacGGAGCCCATGC
AGTATAAAAGGTTTGCCTCTAATATGCATCCATCTTTAACTTATTTTGCT
TGTTTTCCGCACACGtcgaaacattacgtcattaaaaTCATGAATTGATG
CTAGATCCTATCTATCAGACAGGGCCTTTTTAATGAAGGAACCAaaacag
tacacgttttttataagaacaaactatataagaacataaggcttcgatag
ccaaaatgttaagaacaagttaagaatattttaaggctttgcagacatCG
ACTTTCATAGGAAaatatggacaaaaatactcaaaaaatggcgaaaataa
gaacatgttaagaacatttttaggctttaaaattaaaaagttaagaacat
tccaaggcttcaaaaattttggatgtttttataaaaaaacgagtAGTTTT
CGTTCTCAAACAGGTTTAAACTCCTCCTCTTACGAAGCCGTGAGAGATCC
GAAGACTGGCTCTGTTTGAAGACGGATTAGATGAGACTTTAAATAGTATT
TAATTAGGGAAGTTTGAGTGTATATAAAGTATAAGTGTCAGTAGGTAGTC
AAACATCAAGTCAACAGAATGACTATTATCCTCAGTATAGATAAATATTG
AATATATTTTGGTCCAAAGCAatagatatttttttcaatattttctcaaG
GGATACGAGTGATGAGTTAAAGAAATGGTCTTGTCAATAAATATCTCGTA
AGCCTCATTTGACCAAATCATCCATGCATACCTAAGAGAAATACCAAGAA
CCTGAAATCCCAAATCTCCTCATTTCTACTTTCtcattatttcttctttt
agaaaatGTCTAGACCAAACTCAACAGTACTTCATCACGCAATAGCAACG
GGCGATTTAGAGACCGTTCAAAGCCTCTTAAAACAAGGTGTTGTGGACGC
TGACACGAGACTACAGGTAAAcccgatttccccgattttcacTTGATTTC
ACCGATTAAAGAGATCGTTATAGTTTTGTAAAGTCATCCTCCACATGTGG
AAAACTGTCATTATTTGAAGATGCGATAGCTAACTGAAAACCTATATCAT
CTTAtccgaatctttaaaaaataagcCTCTCAAACTTTCGGTGTCTCCTG
GCCAACTATTTCTGTAATTTGATTATATGACTAACAAACTCAAAATAAGT
TTTCTCGCTTTCACTGTTCAGTGTTCGATAGAGTACACTTCGATCcctaa
tttaaaatatttgatatCTGTGATAATAAAAGGTTGTACAGGTATGATTT
GgggaaaaatttgaataattcaACCCGTTGTTTCTTTATCTTAGGTTGAC
GAAGAGATTCTAGAGACGGCAAGTCGTAAAAGTTACACGTCCATCCGAAG
CTATCGACAACAAAGTATGGCTAACGAAAACATTGCCGAAGAAAATGAAA
GCGAACTCACAACAATTGATGACCAGGAGGAAGAGAACAAATCTAGTGAA
ACTGGAAATCATGATAACACATCCAGCAGTACATCCAGTGAACTTGAAAC
TGACGAATTTAAATCCAGTGAACTGAGAAGCGAGAATATTGAATCCACTG
AAATAGATTTGGAGTTTAAAACGGCATCCATTGAAATTGACGATGAAGAA
AAAGacagtgaaaatgaaattgaaaaaattatggAAGAATGccaacacga
ggctgaaatcgaaaacGTAGTTCCAGAAGAAGAGACCCCTATTGAAGATA
GATACCTTAAAGCACAACCCATTGTGGGTATATCTACACCTCAAGACGAG
GCTGAAATAATAGTCCAAGATGATTTGGTAGAAGACCGACTGCAGCCTGT
GCTCCAACGATTGCGAGAGCCAGACATGGAAAGCTGTCAAAGCGGCTCAT
CGACACCCTTATTGAACAATAACAGAGGATCACTCGCCGATGTGATTGAC
TTGAAACTGAGAGACGATAATGAGGGTTTGTTTGAGCGAGCGCCTTCGAT
GAGAGTAAATCCGATGAGTGAAGAAGGAGGTGCACCAAAGAAGTTGATTC
CAAGGTTCGANGAAACTGAGAGACGATAATGAGGGTTTGTTTGAGCGAGC
GCCTTCGATGAGAGTAAATCCGATGAGAGTAAATCCGATGAGTGAAGAAG
GGAGTGCACCAAAGAAGTTGATTCCAAGGTTTAGACCATTTCTTCTTTTA
ACTTCTTTCTTGTAGACTTCTCAGTTATAATTTCAATTCCTTGTGAACTT
CTCAGTTATAACTCTGTGACTTGAAATCTCTCCATTACTTGAGTACATCT
ATCGCCTATTGCATCTTCTTCAGCTCCATATTCTTATAATTGGCTTTCTA
CAAGGCAAACTCTTCATAATTCGAACATTTCGTGTTCTTTTGAGCGTCTA
AGTTAGAGTTACAAACCAAAAATAACAATGCTATATCGCGATCCAAACTA
GATATctaagatttaatttttttaaagattggtaCTGTTTAAAGTTCCTG
GTAAGGctaaacttcatttttgaagATCAATCTTTGAAAAAGGATGTTCT
ATTTTGACATAGGTTGAAAAGGAAGATCTCGTTGAAGTTCAACAAGAAAC
CAAAAAGAGACCTCTTggatgaagatgatgatgacGACTTGATTTATGAG
AATCTGGTCAAAACAAAGAACGTCGATGACGCACAGGTGAGTGGTATTGA
GAGTTGCCAGGTGGTCTTTCATGGAGTGACTTTTTGGCTGAATGTtcttg
ttttggtgttttttttttgctatttgatCAGAGAGTTTCTCATTTcgttg
attttttaaggaaaatgtcATTGGGTGGACCCCAATACTTACTAGCAAAA
AGTCCCTTTTAAGTTGTCCTTTTTCGATACATTCAGACTTACTGTGTGCT
TGCCCGAGCTACTGAATCAACTGTATCTCTAAAAtctgattattttgaat
ttcagcTTGACGAANAGGATATAGGATCTAGTAACAACTTCTTTTTCAAC
CacttctcaatatatttcagcTTGACGAGAATTTCGAAGGTGTGGCTTTC
TTCGAAGCAGTCCGTGACGGTATGGATATGATAGTCCAAACATTGTTGGA
AACCAGCGATAATTACCAACTCAACATGTTGGATGAGAACGGATTCACAC
CGGCAATGAATGCCGCATGGCACGGACAAGCAGACTGCTTACAAATCTTA
ATCAAGCACGGTGCGAATACAGACCTCCGAACGGCTACCGGCTGTACCGC
AGCACATTTTGCCGCCGGACAAGGTAATGCAGAATGCCTTCAACTCCTGA
TCGACGATGATAAAGATCAGATAGATATTAAAACAAAATTCGGAGCAACG
CCCTTGATTTTATCCGCCAAGGGCGGCCATAACGAATGTATGGAGATTCT
CCTTGATGCAGGTGCGGATGCAAACGTTCAGTACCGGGGAAAACAGAATG
CGGTACTGTTCGCAGCCGGAAACGGACATTATGAATGTCTCGAAACACTA
ATCGAGCATGAAGTTAATCTGAATCAAACTAATTCCCAAAAAGTAACGCC
CTTAATGAGGGCGGTCCAACAAGGTCATAATACGTGTGTGGTGTTACTTA
CCGATAAGGGCGCCGATATTAATCTGCAAGATGCGATCGGGCGGTCCGCC
CTACATTTCGCAGTCGAATATAACAACTCGAAGGGACTTNATGCGATCGG
GCGGTCCGCCCTACATTTCGCAGTCGAACATAACAACTCGAAGGGACTAA
AATTGTTGTTACAACAGGGTGCAAATGTGGATTTAAAAACGAAAGGTGGT
TCGAAGCCGCTCGATTATGCTGAGCGTTTTCAAAACACTCGCCTTGGAGA
AATGATTGAAAATCATATTAACAAGCTCAGGGAAGAAGtcgaaaaggaaa
aagaaattgaagtaCAAAAACAAATCGTCGAAGAGAAAGAGAACAAAGTT
TCCTGTCTAAGTTTCAAACATATATTTAGGCGCCGAAGTCGCAAAAATTC
GGACGTTCAAAAAGCTGTATAACAAATAGAGGGGACCAATCTATATAGTA
TAGCAATATTGCAACGTAATATCTTGTATGTGATGGAAGGAGATTTGCTT
TCTGTGGCCCTTATGAGGGAAAAATGTTCTCGAGATGGGCACCAATAGGC
GTTGAACCGAAACATCAAGCTGCTTTGATAAACACAAATCTCACAAACAA
AAAAGATAGTAAGACCATGTTccgacgttacggttccgttccgctccgaa
acgaaacagTTCCGAAACAAGTTTGAACATcgaaattcgaaacgtcaaaa
agaagactttacacagtaaaacagatcgaaacggtttcacTCCACtaatc
ggaacggaactgctccattttcttgctccgaaacgttcctaaactaatat
gaacactctcgatccgtaacgaaaattaCACtagagcgaaacggaaccgt
aatGGCTGAACAGGGTCTAAGCAATCAAATATTGAAAAGATAGTCCTTTG
AAATTGGCAATGATGTAAAAAAGGAGAGAATCGTTTTCTGATGATATCTT
ATCATAAACTTGAGAGCACTTGTAGTAAAGAAAACAAGGTGAGCGGATGT
TCGGCGTCGAAAGATAAACAACAAACACTGTGATAATCGTTCCATAAAAG
AGGGTGATACCTTATCATATGCCAAAGAACACATTGAATCCTAATATGAG
ATTGAATTACCTCATAACTCGTGTATATAATACCAAACATTGAATAATAT
GGATATAACAGGATCTTTGCTATGTTGTAACGCTCTGAACATTAGAGTAG
TTTGTAGTGATATAATACGGATAAAATAAGATCTTTGCTATGTTGTAACG
CTCTGAACATTAGAGTAGTTGTAGTGGCATCTTAACAACTCGTTACTAGG
CTATTTTGCGAATAATTTTAATTAAACTTTTATTATGGAGGGCTCCAATT
CGTTTTTAAAAGAGCGAAATTATTAccttatattatattatatgtGTATA
TTCTTAATTCTATGAaattaatcttaaaatttctagtatccaagaagaaa
aaaatctcatggGCCCCGGCGACCAGTTTGAAGTAAGGGGGGAAATATTG
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041295XLOC_041295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065904-exon-scaffold_448-1491911889:320710..320736TCONS_00065904-exon-scaffold_448-1491911889:320710..320736Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1510915933:320710..320736TCONS_00065904-exon-scaffold_448-1510915933:320710..320736Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1575043694:320710..320736TCONS_00065904-exon-scaffold_448-1575043694:320710..320736Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1491911889:331712..331825TCONS_00065904-exon-scaffold_448-1491911889:331712..331825Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1510915933:331712..331825TCONS_00065904-exon-scaffold_448-1510915933:331712..331825Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1575043694:331712..331825TCONS_00065904-exon-scaffold_448-1575043694:331712..331825Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1491911889:332204..333037TCONS_00065904-exon-scaffold_448-1491911889:332204..333037Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1510915933:332204..333037TCONS_00065904-exon-scaffold_448-1510915933:332204..333037Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1575043694:332204..333037TCONS_00065904-exon-scaffold_448-1575043694:332204..333037Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1491911889:333422..333545TCONS_00065904-exon-scaffold_448-1491911889:333422..333545Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1510915933:333422..333545TCONS_00065904-exon-scaffold_448-1510915933:333422..333545Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1575043694:333422..333545TCONS_00065904-exon-scaffold_448-1575043694:333422..333545Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1491911889:333880..334528TCONS_00065904-exon-scaffold_448-1491911889:333880..334528Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1510915933:333880..334528TCONS_00065904-exon-scaffold_448-1510915933:333880..334528Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1575043694:333880..334528TCONS_00065904-exon-scaffold_448-1575043694:333880..334528Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1491911889:334589..335960TCONS_00065904-exon-scaffold_448-1491911889:334589..335960Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1510915933:334589..335960TCONS_00065904-exon-scaffold_448-1510915933:334589..335960Clytia hemisphaericaexon
TCONS_00065904-exon-scaffold_448-1575043694:334589..335960TCONS_00065904-exon-scaffold_448-1575043694:334589..335960Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:320710..335960 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00949209	0.00934187	0	0	0	0	0.216398	0.000138394	0	1.47022	0.0765315	4.98731e-05	10.5339	5.66896	2.03827	7.49003	8.52192e-05	4.79668e-06	0.307544	5.06149e-07	0.483488	2.06022	0	1.05808	0	0.000224975	0.000565861	0.602814	19.7362	28.921
Blast
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BLAST of TCONS_00065904 vs. Swiss-Prot (Human)
Match: DAPK1 (Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6)

HSP 1 Score: 112.849 bits (281), Expect = 5.324e-25
Identity = 82/252 (32.54%), Postives = 133/252 (52.78%), Query Frame = 2 
Query: 1091 DAQLDE--NFEGVAFFEAVRDGMDMIVQTLLETSDNYQLNMLDENGFTPAMNAAWHGQADCLQILIKHGANTDLRTATGCTAAHFAAGQGNAECXXXXXXXXXXXXXXXTKFGATPLILSAKGGHNECMEILLDAGADANVQYRGKQNAVLFAAGNGHYECLETLIEHEVNLNQTNSQKVTPLMRAVQQGHNTCVVLLTDKGADINLQDAIGRSALHFAVEYNNSKGLKLLLQQGANVDLKTKGGSKPLDYA 1840
            D  LDE  +F   A   A+ D     +Q LL +  NY +N  +++G  P + AA  G    LQ+LIK G+  D++   G  A ++AA  G+ +     + ++K  +D+K K G   L ++A+ GH +  ++L   G++ N+Q + ++  +  AA +G+Y   + L E   N+N  N +  TPL+ A  +G++  V  L + GAD+N  D  G  ALH AV     + +K LL QG  VD + + G+ PL  A
Sbjct:  334 DDTLDEEDSFVMKAIIHAINDDNVPGLQHLLGSLSNYDVNQPNKHGTPPLLIAAGCGNIQILQLLIKRGSRIDVQDKGGSNAVYWAARHGHVD-TLKFLSENKCPLDVKDKSGEMALHVAARYGHADVAQLLCSFGSNPNIQDKEEETPLHCAAWHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNACDKDGHIALHLAVRRCQMEVIKTLLSQGCFVDYQDRHGNTPLHVA 584
The following BLAST results are available for this feature:
BLAST of TCONS_00065904 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPK15.324e-2532.54Death-associated protein kinase 1 OS=Homo sapiens ... [more]
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