TCONS_00065947 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00065947
Unique Name	TCONS_00065947
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	5536

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_448:231287..239002-
coding sequence from alignment at scaffold_448:231287..239002-

transcript sequence

>TCONS_00065947 ID=TCONS_00065947|Name=TCONS_00065947|organism=Clytia hemisphaerica|type=transcript|length=5536bp
GGTAGGTCCCAGTCGTAGTGGTTCGACAGATGCGACGTCACAGGAAGAAA
ATATAGTAGCAAGTCCTAGTTGCTCATCTAATGTGACTTCAGAAAACGAG
AATGCAGGTCCTAGCCGTAGCTCTACAAGTGTGACGTCACAAGATGAAAG
TACTCATTCATCAGAAAACAAAGAGGACTCGAATGAAGAAACTTCACAAA
CGTCTGATGAGCAGACTACACATTCAAGGTCTGACGGCGGAAGCGATGGT
AGTGAATCTGCAGATGGAGGGAGTGAAGAGGAAAATGACGATAGCAACCC
AAGTGATAGCAAGGATAGTGAAGAAGATCAATCATCTTCGGGCCGATCAC
AAAGTAATTCGAACAAGGGTGACCAAACGAACCTTAAACAACTTCCTGAA
ATTCAACTCGAATCTGCTTCTTCGGAGAATGATATTGAAGACATTGATGT
TAGCTTGGAACGAGAAATCAAAGACCAGCCTACCGACCACGATGACAGTT
CTGATACAGAATCTATTTCTAACGATTCCATACAATCACTACGATCTGAT
TCACCAGATCAGAGCAAAGGCGCGGGAtctgattgttttgattggttCGA
AGCTACTGATAAGCTGAAACAGGCAAAATCTTACAAATTAGTGTTACACT
GTGCTGCCGAATCTAACCCTTCTCTAAATTGTGCTCCCGAAGTTGATCGT
TCGATGAGCTGCGCTGAAATAAATGACCTATCGTTAAGCTGTCACGCAAA
ATCTAATCGTTCGCTGAGCAGCCATCGAAAATCTAACCACTCACTAGATT
TCGCTGAAAAATCTTACCGCTCGCCGAGCTGTTCTAGAACATCTGACCAC
TTACTCGGTTTTGCTGGGAAATCCGACCGCTCGCTAAGTTGTGACCGCTC
ACTGAGTAGCACGAAAAAATCTGATTGCTTTGATTGGCTTGAATCGAGCT
CCNTGCTGGGAAATCCGACCACTCGCTAAGTTGTGACCGCTCACTGAGTA
GCACGAAAAAATCTGATTGCTTTGATTGGCTTGAATCGAGCTCCAAGCAA
AAGATAATCGAGACAAATATTTCTGATCGATCACACTTAAGCTTGTCAAG
AGGACGCTCGAAATCTAGAAAATCTCACAGAAGCTTGTCAAGGGAACATT
CGAGATCTGGGAGATCTCGCAGAAGCTTGTCAAGAGGACGCTCGAGATCA
GGGAGATCGAGAAAGAACTTAGATGCAAGAGCAGCTGAATCAACTAAATC
GTCTCGATCAAGAGTAGGCAAATCTCAAGACAGCAAGAGCAAGAGGTTAG
AGAAAAGCCGACCAGAGTCTGACTTATCGAGCAAAAGTTCAGATGATTCA
TCGAAGTTGGGAAATAAAAGCTCACGATCGGTTGGTTCTGTCGAATTATT
CGTATCTGAGCGAAGCAAACATTCAAAAAGAGATACATCACATAAAAGTT
CGAAATCAGTCAGTAAAAGCGCCCGTTCGAAGAGTGCGTTATCCGATACA
AAGTCAACCACCAAACCGCTTGAGAAGAAATACTTTTCAGTCATAGCAAC
AGCTCATGAAAATGAAGACGAGGATAGTAGTGAGTTTGCTTCGGCATGGG
AGGGCTCGCTTAGTAAGGCTTCTTTTACAAAATCAGCAAGCGCGACAAGT
CATCATAAATCTGGCGCATTAAGCCGAACATCTGATCGATCACATTCACA
TGCATCTAAAAGTCATAGCTCAAGAACGGATAGAATATCTAAAGGTTATA
GCTCAAGACCAGATCGATCATCCAGAAGTCATAGCCCAAGAACTGACGGA
GCATCTACAAGTCGGAGCCCAAGACATGATGGTACATCTAAAAGCCATAT
CTCAAGACTTAAGGAACCATCTAAAAGTCATAGGTCAAGACATGCTAGTG
CATCGAGAAGTCATAGCTCAAGACATGAAGGAACATCTAAAAGCCATAGC
CAAAGGCCCGATCGGTCATCTACAAGTCGGAGCCCAAGACATGATGGCAC
ATCTAAAAGCCATATCTCAAGACTTAAGGAACCATCTAAAAGTCATAGTT
CAAGACATGTCGGACCATCTAAAAGCCATAGCTCAAGGCTTTCTGGTACA
TCTAAAATCCATATTTCAAAACCTGAGGAGACATCTAAAAGTCATAGCTC
AAGATCTGATCGACCATCTAGAAGTCATAGCTCAAGACATGACGGAGTAT
CTAAAGGTCATAGTTTAAGACCTGACGGGACATCTAAAAGTCACAGCTCG
CGAACTGATCGACATTCAAAAGATTCCAGGGTAAGAGATCGCTCCATCTC
CAAAAGCCGCCAAAGTTCAACGAGAGCTGACCTTTCACATGCTGAAGCGG
GAACAAGCAGGTCTCTATCAGTTTCGCATAGATCAAGTCATAAAGGTCCC
TCCATAGTTGTCACGGAAAGTCACGGTGGAGATGCTCAACATTTACTCTC
AATATCACATGAATCTCTGAGCAAACGAAGTAAATCAAAAGTTGATATAT
CAATGTCAGGATCGCACAGGTCTGTCAGCCATAGAAGTGTATCAAAGGCG
GGATCACATAGGTCTGTCAGCCGTACGGACGCATCAAAAGCGGAGAGATC
ACATTCAAGATCTCATAGGTCTGTCAGCCGTAGAAGTTCGCGCTCAATAT
CTCACAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAGGTCACAT
TCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTCA
CAGGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTCAA
GATCGCATAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAGGTCA
AATTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATC
TCACAGGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATT
CAAGATCGCATAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAAG
TCACATTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGC
GGAGAGATCGCGCTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGT
CAAAAGCGGAGAAGTCACATTCAAGATCTCACAGGTCTGTCAGCCGTACA
GACGCGTCAAAAGCGGAGAGATCGCGCTCAAGATCTCACAGGTCTGTCAG
CCGTACAGACGCGTCAAAAGCGGAGAAGTCACATTCAAGATCTCATAGTT
CGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTCACAGGTCTGTCAGCCGT
ACAGACGCGTCAAAAGCGGATAGGTCACACTCAAAATCTCACAGGTCCGG
TAGCCATAGAAGATCGAACTCGAAAACTCATAAATCAGCAAGTCACAGAA
GTCCATCGCACCATGATTCAAGCAAGTCCGTATCTGAAAGATCGTTAAGT
ATTTCTACGGAGAAAGCAACAAAAGAACTTCCAAAAACAATGAGTGATGA
TTTCACCAGAAAGAACCGAGCGATGAGCCTAAAACCACTCGGAGATGCTG
TCGTTTATACGGCAACGACCAGTCCGGCACCTACGGGTTTCCATCGCGGT
AGAAGGAGACAAAACAGTCAACTGAAATCTATTTCAGAAGAATTTTCATT
GTATGGAGGCTCTTAttcgaaagctggccaatcgaGCAAAAGCTATAGAA
GGAAAGGTGGTAAATCAAGAAAAGATTCGCAACGACCAGGCAGTTCTATT
GATTGGTCAAAGAGAAGCGGCAATAAGAGATCAAAATCGGCCGACTCGAG
AAGGAGACGTGTAGATTCATGTCAATCCATTCAAATGTCGTATTTATTTG
CGGACATCGGGAAAAAAAGTCGACGATCGAAATCGGAAAGTCACGTGGGG
CGATCACATTTTTCCACACACCAATCATCGCATAGCAACCAAGATTGTTC
GGACTGGTGCGAATCAGCATCCTACCTAGCACTTCCCACCATCAAGGTGG
AAAACTCTGACCAATCAGTAGATAACAATGACAAGAAATTAAGTAGATCA
GTGCATCGAGGGAAGTCTGACCGCAAAAAGTCGAAAAGCCGTGGCCGCTC
GCGAGGACGTTTGCGTTCACGAAAATCAAGTTATTCGAAGGGAGAGTTAA
GCGCTCATTTGTTGAGTCCAGGACGAAAGCCTTCTAAATCATCCAAGAGA
TCAGGCTCAAAGACGAAAGTGTCAAGATCCGCTTCATCGTTTGACATGAT
GTCAAATAAATCTTTATCACGATCTCGCCATTCAAGCAGACAGATGGGAT
TGAAGTCTAAACAATCCAGTCGAAGATCGAGGTCTGTGCGTAGTCGGGGT
AGATCATATTCGCGATCTCGCCATTCCAGTCGAAGAACGAGCTCTGTACG
TGGTCGTAGTAGATCTTATTCGCGATCTGGCCATTCCAGCAGAAGAGCGA
GCTCTGTGCGTGGACGCAGTAGATCTTATTCGCGATCTGGCCATTCCAGT
AGAAGAGCGAGCTCTGTGCGTAGTAGCAGTAGATCGTTTTCGCGATCTGA
CTTTTCTAGTCGAGGATCAAGGTCTGTGCATAGGCGCAGTAGATCATTTT
CGCGATCTGACCGTTCCAGTCGAGGATCGAGGTCTGTGCATAGGCGCAGT
AGATCATTTTCGCGATCTGGTCATTCTAGTCGAAGATCGAGGTCTTTTCA
CTCGAGCGCAAGCTGTTATTCGAGGTCCAGTTATTCGGGCGCAAGTTCGT
ACTCAAGGTCCGGTCAATGGAGCGGAACATCTTATTCCAGATCCGGTGAT
TCACGTTATTATAGTTCAAGATCCGGCACCAGTCGAGAAAGATCACGCAA
AAATTCCAGACGAAAATCAGATTCGCATACGTCTACTGAATCGACTGAAG
TTTTAATTTCAAGATGCGATGGAAATTCATTCTTTAAGACTTTTGAAGCT
ATTCAAGAACCAGCTTCTGTGGTCCATTTGGATGTGAGATCTGGAACATC
AAGACGATCGAGATCAGCAAGTCGAGAGATATCAATTGAATCGAAGAAGG
ATTCGTCATCTGGCGACTGGTCGGACGGTGTAAAACATGGCTCAAAATCC
GATCGTTCAAAATCCGATTTAGATGGAGACGCTTCCGATATCCCGATTTC
AAAAGGTTCTCACAAATCACACTTATCAGCGAGAAGATCTTCTCGGAGAA
GTAAGAGCAACATGTCATTATCTGTTGAACCAAAGAAAACGGATTCAAAG
GAGACCGTGAATGAAAACCAAAAGGAAACCGATGAAGAATTCTCcTCTGA
TGACGATCGAGTTCGTACTGATGATCAATATTCAGACAGCGAGTTCCCGC
TCGACGATCCATCAACAATGAGAATTGATAAGCGTACAGGAAAAGTCAAG
AAACGAAAGAAGACCTTGGTCAAAAAGAAGTCCAAGAAAAGCGACAGACA
GATTGAATTACCGCCCTTGAGAGGCGGATTAACACCATCAGGAAACTCTG
GTTTGAATGTCGGTGCACTCCCGTCAATCACAATGA

Run BLAST on NCBI

protein sequence of TCONS_00065947-protein

>TCONS_00065947-protein ID=TCONS_00065947-protein|Name=TCONS_00065947-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1011bp
MSGSHRSVSHRSVSKAGSHRSVSRTDASKAERSHSRSHRSVSRRSSRSIS
HRSVSRTDASKAERSHSRSHRSVSRRSSRSRSHRSVSRTDASRAERSHSR
SHRSVSRTDASKAERSNSRSHRSVSRRSSRSRSHRSVSRTDASRAERSHS
RSHRSVSRTDASKAEKSHSRSHRSVSRTDASKAERSRSRSHRSVSRTDAS
KAEKSHSRSHRSVSRTDASKAERSRSRSHRSVSRTDASKAEKSHSRSHSS
VSRRSSRSRSHRSVSRTDASKADRSHSKSHRSGSHRRSNSKTHKSASHRS
PSHHDSSKSVSERSLSISTEKATKELPKTMSDDFTRKNRAMSLKPLGDAV
VYTATTSPAPTGFHRGRRRQNSQLKSISEEFSLYGGSYSKAGQSSKSYRR
KGGKSRKDSQRPGSSIDWSKRSGNKRSKSADSRRRRVDSCQSIQMSYLFA
DIGKKSRRSKSESHVGRSHFSTHQSSHSNQDCSDWCESASYLALPTIKVE
NSDQSVDNNDKKLSRSVHRGKSDRKKSKSRGRSRGRLRSRKSSYSKGELS
AHLLSPGRKPSKSSKRSGSKTKVSRSASSFDMMSNKSLSRSRHSSRQMGL
KSKQSSRRSRSVRSRGRSYSRSRHSSRRTSSVRGRSRSYSRSGHSSRRAS
SVRGRSRSYSRSGHSSRRASSVRSSSRSFSRSDFSSRGSRSVHRRSRSFS
RSDRSSRGSRSVHRRSRSFSRSGHSSRRSRSFHSSASCYSRSSYSGASSY
SRSGQWSGTSYSRSGDSRYYSSRSGTSRERSRKNSRRKSDSHTSTESTEV
LISRCDGNSFFKTFEAIQEPASVVHLDVRSGTSRRSRSASREISIESKKD
SSSGDWSDGVKHGSKSDRSKSDLDGDASDIPISKGSHKSHLSARRSSRRS
KSNMSLSVEPKKTDSKETVNENQKETDEEFSSDDDRVRTDDQYSDSEFPL
DDPSTMRIDKRTGKVKKRKKTLVKKKSKKSDRQIELPPLRGGLTPSGNSG
LNVGALPSITM

Run BLAST on NCBI

transcript from alignment at scaffold_448:231287..239002-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00065947 ID=TCONS_00065947|Name=TCONS_00065947|organism=Clytia hemisphaerica|type=transcript|length=7716bp|location=Sequence derived from alignment at scaffold_448:231287..239002- (Clytia hemisphaerica)
GGTAGGTCCCAGTCGTAGTGGTTCGACAGATGCGACGTCACAGGAAGAAA
ATATAGTAGCAAGTCCTAGTTGCTCATCTAATGTGACTTCAGAAAACGAG
AATGCAGGTCCTAGCCGTAGCTCTACAAGTGTGACGTCACAAGATGAAAG
TACTCATTCATCAGAAAACAAAGAGGACTCGAATGAAGAAACTTCACAAA
CGTCTGATGAGCAGACTACACATTCAAGGTCTGACGGCGGAAGCGATGGT
AGTGAATCTGCAGATGGAGGGAGTGAAGAGGAAAATGACGATAGCAACCC
AAGTGATAGCAAGGATAGTGAAGAAGATCAATCATCTTCGGGCCGATCAC
AAAGTAATTCGAACAAGGGTGACCAAACGAACCTTAAACAACTTCCTGAA
ATTCAACTCGAATCTGCTTCTTCGGAGAATGATATTGAAGACATTGATGT
TAGCTTGGAACGAGAAATCAAAGACCAGCCTACCGACCACGATGACAGTT
CTGATACAGAATCTATTTCTAACGATTCCATACAATCACTACGATCTGAT
TCACCAGATCAGAGCAAAGGCGCGGGATCTGATTGTTTTGATTGGTTCGA
AGCTACTGATAAGCTGAAACAGGCAAAATCTTACAAATTAGTGTTACACT
GTGCTGCCGAATCTAACCCTTCTCTAAATTGTGCTCCCGAAGTTGATCGT
TCGATGAGCTGCGCTGAAATAAATGACCTATCGTTAAGCTGTCACGCAAA
ATCTAATCGTTCGCTGAGCAGCCATCGAAAATCTAACCACTCACTAGATT
TCGCTGAAAAATCTTACCGCTCGCCGAGCTGTTCTAGAACATCTGACCAC
TTACTCGGTTTTGCTGGGAAATCCGACCGCTCGCTAAGTTGTGACCGCTC
ACTGAGTAGCACGAAAAAATCTGATTGCTTTGATTGGCTTGAATCGAGCT
CCNTGCTGGGAAATCCGACCACTCGCTAAGTTGTGACCGCTCACTGAGTA
GCACGAAAAAATCTGATTGCTTTGATTGGCTTGAATCGAGCTCCAAGCAA
AAGATAATCGAGACAAATATTTCTGATCGATCACACTTAAGCTTGTCAAG
AGGACGCTCGAAATCTAGAAAATCTCACAGAAGCTTGTCAAGGGAACATT
CGAGATCTGGGAGATCTCGCAGAAGCTTGTCAAGAGGACGCTCGAGGTCT
AGGAGATCTCGCAGAAGCTTGTCAAGAGGACGCTCGAGATCAGGGAGATC
GAGAAAGAACTTAGATGCAAGAGCAGCTGAATCAACTAAATCGTCTCGAT
CAAGAGTAGGCAAATCTCAAGACAGCAAGAGGTTAGAGAAAAGCCGACCA
GAGTCTGACTTATCGAGCAAAAGTTCAGATGATTCATCGAAGTTGGGAAA
TAAAAGCTCACGATCGGTTGGTTCTGTCGAATTATTCGTATCTGAGCGAA
GCAAACATTCAAAAAGAGATACATCACATAAAAGTTCGAAATCAGTCAGT
AAAAGCGCCCGTTCGAAGAGTGCGTTATCCGATACAAAGTCAACCACCAA
ACCGCTTGAGAAGAAATACTTTTCAGTCATAGCAACAGCTCATGAAAATG
AAGACGAGGATAGTAGTGAGTTTGCTTCGGCATGGGAGGGCTCGCTTAGT
AAGGCTTCTTTTACAAAATCAGCAAGCGCGACAAGTCATCATAAATCTGG
CGCATTAAGCCGAACATCTGATCGATCACATTCACATGCATCTAAAAGTC
ATAGCTCAAGAACGGATAGAATATCTAAAGGTTATAGCTCAAGACCAGAT
CGATCATCCAGAAGTCATAGCCCAAGAACTGACGGAGCATCTACAAGTCG
GAGCCCAAGACATGATGGTACATCTAAAAGCCATATCTCAAGACTTAAGG
AACCATCTAAAAGTCATAGGTCAAGACATNGATCTCGCAGAAGCTTGTCA
AGAGGACGCTCGAGGTCTAGGAGATCTCGCAGAAGCTTGTCAAGAGGACG
CTCGAGATCAGGGAGATCGAGAAAGAACTTAGATGCAAGAGCAGCTGAAT
CAACTAAATCGTCTCGATCAAGAGTAGGCAAATCTCAAGACAGCAAGAGG
TTAGAGAAAAGCCGACCAGAGTCTGACTTATCGAGCAAAAGTTCAGATGA
TTCATCGAAGTTGGGAAATAAAAGCTCACGATCGGTTGGTTCTGTCGAAT
TATTCGTATCTGAGCGAAGCAAACATTCAAAAAGAGATACATCACATAAA
AGTTCGAAATCAGTCAGTAAAAGCGCCCGTTCGAAGAGTGCGTTATCCGA
TACAAAGTCAACCACCAAACCGCTTGAGAAGAAATACTTTTCAGTCATAG
CAACAGCTCATGAAAATGAAGACGAGGATAGTAGTGAGTTTGCTTCGGCA
TGGGAGGGCTCGCTTAGTAAGGCTTCTTTTACAAAATCAGCAAGCGCGAC
AAGTCATCATAAATCTGGCGCATTAAGCCGAACATCTGATCGATCACATT
CACATGCATCTAAAAGTCATAGCTCAAGAACGGATAGAATATCTAAAGGT
TATAGCTCAAGACCAGATCGATCATCCAGAAGTCATAGCCCAAGAACTGA
CGGAGCATCTACAAGTCGGAGCCCAAGACATGATGGTACATCTAAAAGCC
ATATCTCAAGACTTAAGGAACCATCTAAAAGTCATAGGTCAAGACATGCT
AGTGCATCGAGAAGTCATAGCTCAAGACATGAAGGAACATCTAAAAGCCA
TAGCCAAAGGCCCGATCGGTCATCTACAAGTCGGAGCCCAAGACATGATG
GCACATCTAAAAGCCATATCTCAAGACTTAAGGAACCATCTAAAAGTCAT
AGTTCAAGACATGTCGGACCATCTAAAAGCCATAGCTCAAGGCTTTCTGG
TACATCTAAAATCCATATTTCAAAACCTGAGGAGACATCTAAAAGTCATA
GCTCAAGATCTGATCGACCATCTAGAAGTCATAGCTCAAGACATGACGGA
GTATCTAAAGGTCATAGTTTAAGACCTGACGGGACATCTAAAAGTCACAG
CTCGCGAACTGATCGACATTCAAAAGATTCCAGGGTAAGAGATCGCTCCA
TCTCCAAAAGCCGCCAAAGTTCAACGAGAGCTGACCTTTCACATGCTGAA
GCGGGAACAAGCAGGTCTCTATCAGTTTCGCATAGATCAAGTCATAAAGG
TCCCTCCATAGTTGTCACGGAAAGTCACGGTGGAGATGCTCAACATTTAC
TCTCAATATCACATGAATCTCTGAGCAAACGAAGTAAATCAAAAGTTGAT
ATATCAATGTCAGGATCGCACAGGTCTGTCAGCCATAGAAGTGTATCAAA
GGCGGGATCACATAGGTCTGTCAGCCGTACGGACGCATCAAAAGCGGAGA
GATCACATTCAAGATCTCATAGGTCTGTCAGCCGTAGAAGTTCGCGCTCA
ATATCTCACAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAGGTC
ACATTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGAT
CTCACAGGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACAT
TCAAGATCGCATAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAG
GTCAAATTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAA
GATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAAGTCG
TATTCAAGATCGCATAGGTCGGTCAGCCGTACAGACGCGTCAAGAGCTGA
GAGATCACATTCAAGATCGCATAGGTCTGTCAGCCGTACAGACGCGTCAA
AAGCGGAGAGGTCGCATTCAAGATCGCATAGGTCTGTCAGCCGTACGGAC
GCGTCAAGAGCGGAGAGATCACATTCAAGATCGCATAGGTCTGTCAGCCG
TACGGACGCGTCAAAAGCGGAGAGGTCAAATTCAAGATCTCATAGGTCTG
TCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTCAAGATCGCAT
AGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAAGTCACATTCAAG
ATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAGATCGC
GCTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAG
AAGTCACATTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAAA
AGCGGAGAGATCGCGCTCAAGATCTCACAGGTCTGTCAGCCGTACAGACG
CGTCAAAAGCGGAGAAGTCACATTCAAGATCTCATAGTTCGGTTAGCCGT
AGAAGTTCGCGCTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGTC
AAAAGCGGATAGGTCACACTCAAAATCTCACAGGTCCGGTAGCCATAGAA
GATCGAACTCGAAAACTCATAAATCAGCAAGTCACAGAAGTCCATCGCAC
CATGATTCAAGCAAGTCCGTATCTGAAAGATCGTTAAGTATTTCTACGGA
GAAAGCAACAAAAGAACTTCCAAAAACAATGAGTGATGATTTCACCAGAA
AGAACCGAGCGATGAGCCTAAAACCACTCGGAGATGCTGTCGTTTATACG
GCAACGACCAGTCCGGCACCTACGGGTTTCCATCGCGGTAGAAGGAGACA
AAACAGTCAACTGAAATCTATTTCAGAAGAATTTTCATTGTATGGAGGCT
CTTATTCGAAAGCTGGCCAATCGAGCAAAAGCTATAGAAGGAAAGGTGGT
AAATCAAGAAAAGATTCGCAACGACCAGGCAGTTCTATTGATTGGTCAAA
GAGAAGCGGCAATAAGAGATCAAAATCGGCCGACTCGAGAAGGAGACGTG
TAGATTCATGTCAATCCATTCAAATGTCGTATTTATTTGCGGACATCGGG
AAAAAAAGTCGACGATCGAAATCGGAAAGTCACGTGGGGCGATCACATTT
TTCCACACACCAATCATCGCATAGCAACCAAGATTGTTCGGACTGGTGCG
AATCAGCATCCTACCTAGCACTTCCCACCATCAAGGTGGAAAACTCTGAC
CAATCAGTAGATAACAATGACAAGAAATTAAGTAGATCAGTGCATCGAGG
GAAGTCTGACCGCAAAAAGTCGAAAAGCCGTGGCCGCTCGCGAGGACGTT
TGCGTTCACGAAAATCAAGTTATTCGAAGGGAGAGTTAAGCGCTCATTTG
TTGAGTCCAGGACGAAAGCCTTCTAAATCATCCAAGAGATCAGGCTCAAA
GACGAAAGTGTCAAGATCCGCTTCATCGTTTGACATGATGTCAAATAAAT
CTTTATCACGATCTCGCCATTCAAGCAGACAGATGGGATTGAAGTCTAAA
CAATCCAGTCGAAGATCGAGGTCTGTGCGTAGTCGGGGTAGATCATATTC
GCGATCTCGCCATTCCAGTCGAAGAACGAGCTCTGTACGTGGTCGTAGTA
GATCTTATTCGCGATCTGGCCATTCCAGCAGAAGAGCGAGCTCTGTGCGT
GGACGCAGTAGATCTTATTCGCGATCTGGCCATTCCAGTAGAAGAGCGAG
CTCTGTGCGTAGTAGCAGTAGATCGTTTTCGCGATCTGACTTTTCTAGTC
GAGGATCAAGGTCTGTGCATAGGCGCAGTAGATCATTTTCGCGATCTGAC
CGTTCCAGTCGAGGATCGAGGTCTGTGCATAGGCGCAGTAGATCATTTTC
GCGATCTGGTCATTCTAGTCGAAGATCGAGGTCTTTTCACTCGAGCGCAA
GCTGTTATTCGAGGTCCAGTTATTCGGGCGCAAGTTCGTACTCAAGGTCC
GGTCAATGGAGCGGAACATCTTATTCCAGATCCGGTGATTCACGTTATTA
TAGTTCAAGATCCGGCACCAGTCGAGAAAGATCACGCAAAAATTCCAGAC
GAAAATCAGATTCGCATACGTCTACTGAATCGACTGAAGTTTTAATTTCA
AGATGCGATGGAAATTCATTCTTTAAGACTTTTGAAGCTATTCAAGAACC
AGCTTCTGTGGTCCATTTGGATGTGAGATCTGGAACATCAAGACGATCGA
GATCAGCAAGTCGAGAGATATCAATTGAATCGAAGAAGGATTCGTCATCT
GGCGACTGGTCGGACGGTGTAAAACATGGCTCAAAATCCGATCGTTCAAA
ATCCGATTTAGATGGAGACGCTTCCGATATCCCGATTTCAAAAGGTTCTC
ACAAATCACACTTATCAGCGAGAAGATCTTCTCGGAGAAGTAAGAGCAAC
ATGTCATTATCTGTTGAACCAAAGAAAACGGATTCAAAGGAGACCGTGAA
TGAAAACCAAAAGGAAACCGATGAAGAATTCTCGTAAGTCGTCTTCTCTT
TTTCACTTCATTTATTATTATGTCAAGTACCGTAAGTTGGTCTAATGTCG
ACATCCCTCTTCTTCTAATTTCGACACCCTTCTTTAGAGATGGGAATAAT
AGGTTGGGATCACTTATAGACAAAAGATTTTTTCTTCTCTGTTTGCTAAG
TAAAGAAAAACAGTTTCCATCAGCGATTCCAACATTCTGATTATTCCTAT
ATTTAGAGAAGGGTGTCGAAATTAGAAGGGGATATCGATATTAGACATAC
TTACGGTAAAAAGTATAGTAAACAGATATTCTATCAATTAAAAGTTCGAT
GGTTGAAAAATGCCTTAACATAGCTTTGCTACCATTTTGTGTGTTATATT
TAAACAATAAGCTAAAGTGTTTATCGAAGTTAAGTGTTAGTTCGACCTTT
AGAAGCCCCAGTATTTGTAACCACAGTTGACGCTCCCTAATTCGATTTTC
GAGAGGAGTTGAATTTTCAAAATTATCGAATAATGGAGCGTATCGTCGAA
TTGGAGAATGTCAACTGTATATTATTCCGCTCATTATACTCTGCCTTCTT
TGTGACTTCCTAAATCAAGACCCATCATGTACATAAAAGAGAGTGTTAGG
TGTAGACTACCAGCATGGAAGACTTTATCTCGTTTTAATCTTAATATTCG
ATTTGTTTTTCTTTTTCCAGCTCTGATGACGATCGAGTTCGTACTGATGA
TCAATATTCAGACAGCGAGTTCCCGCTCGACGATCCATCAACAATGAGAA
TTGATAAGCGTACAGGTAAACTTCATTTATTCAATTCCCACATTCTTTTC
CTAAGCGGTGAAATCTTTTTTGATAAAAGCCTCATCGTCATAATGCTTAG
AATCTAGTGAATTAAATTCGAAGCAGCCTTTGCAGCAACCATTAATTCAA
TGACGATCATTCACTCAGATATGACAAAAACTTAAGCATATGCTAAGCAT
TACCTCGAGCCTTCATTTTCAGAGACCAGGCGTTTTTGGTTGTGTTTTTA
CGTACATTCAAAATTTCCCTAAAATTTTGCTTGGGAAAAAAGCATTCTTC
AAGCATTTTCAGCCTTCAGATTTAAGCGTCTCCAAGCCAGTTTTTGAATT
TTTTGCATGCTTATAAAAAAACATGTAAATCAACAACTGTTGCTAATTAA
TCAAAACATCTACTTCCAGGAAAAGTCAAGAAACGAAAGAAGACCTTGGT
CAAAAAGAAGTCCAAGAAAAGCGACAGACAGATTGAATTACCGCCCTTGA
GAGGCGGATTAACACCATCAGGAAACTCTGGTTTGAATGTCGGTGCACTC
CCGTCAATCACAATGA

Coding sequence (CDS) from alignment at scaffold_448:231287..239002-

>TCONS_00065947 ID=TCONS_00065947|Name=TCONS_00065947|organism=Clytia hemisphaerica|type=CDS|length=3033bp|location=Sequence derived from alignment at scaffold_448:231287..239002- (Clytia hemisphaerica)
ATGTCAGGATCGCACAGGTCTGTCAGCCATAGAAGTGTATCAAAGGCGGG
ATCACATAGGTCTGTCAGCCGTACGGACGCATCAAAAGCGGAGAGATCAC
ATTCAAGATCTCATAGGTCTGTCAGCCGTAGAAGTTCGCGCTCAATATCT
CACAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAGGTCACATTC
AAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTCACA
GGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTCAAGA
TCGCATAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGGAGAGGTCAAA
TTCAAGATCTCATAGGTCGGTTAGCCGTAGAAGTTCGCGCTCAAGATCTC
ACAGGTCTGTCAGCCGTACGGACGCGTCAAGAGCGGAGAGATCACATTCA
AGATCGCATAGGTCTGTCAGCCGTACAGACGCATCAAAAGCGGAGAAGTC
ACATTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGTCAAAAGCGG
AGAGATCGCGCTCAAGATCTCACAGGTCTGTCAGCCGTACAGACGCGTCA
AAAGCGGAGAAGTCACATTCAAGATCTCACAGGTCTGTCAGCCGTACAGA
CGCGTCAAAAGCGGAGAGATCGCGCTCAAGATCTCACAGGTCTGTCAGCC
GTACAGACGCGTCAAAAGCGGAGAAGTCACATTCAAGATCTCATAGTTCG
GTTAGCCGTAGAAGTTCGCGCTCAAGATCTCACAGGTCTGTCAGCCGTAC
AGACGCGTCAAAAGCGGATAGGTCACACTCAAAATCTCACAGGTCCGGTA
GCCATAGAAGATCGAACTCGAAAACTCATAAATCAGCAAGTCACAGAAGT
CCATCGCACCATGATTCAAGCAAGTCCGTATCTGAAAGATCGTTAAGTAT
TTCTACGGAGAAAGCAACAAAAGAACTTCCAAAAACAATGAGTGATGATT
TCACCAGAAAGAACCGAGCGATGAGCCTAAAACCACTCGGAGATGCTGTC
GTTTATACGGCAACGACCAGTCCGGCACCTACGGGTTTCCATCGCGGTAG
AAGGAGACAAAACAGTCAACTGAAATCTATTTCAGAAGAATTTTCATTGT
ATGGAGGCTCTTATTCGAAAGCTGGCCAATCGAGCAAAAGCTATAGAAGG
AAAGGTGGTAAATCAAGAAAAGATTCGCAACGACCAGGCAGTTCTATTGA
TTGGTCAAAGAGAAGCGGCAATAAGAGATCAAAATCGGCCGACTCGAGAA
GGAGACGTGTAGATTCATGTCAATCCATTCAAATGTCGTATTTATTTGCG
GACATCGGGAAAAAAAGTCGACGATCGAAATCGGAAAGTCACGTGGGGCG
ATCACATTTTTCCACACACCAATCATCGCATAGCAACCAAGATTGTTCGG
ACTGGTGCGAATCAGCATCCTACCTAGCACTTCCCACCATCAAGGTGGAA
AACTCTGACCAATCAGTAGATAACAATGACAAGAAATTAAGTAGATCAGT
GCATCGAGGGAAGTCTGACCGCAAAAAGTCGAAAAGCCGTGGCCGCTCGC
GAGGACGTTTGCGTTCACGAAAATCAAGTTATTCGAAGGGAGAGTTAAGC
GCTCATTTGTTGAGTCCAGGACGAAAGCCTTCTAAATCATCCAAGAGATC
AGGCTCAAAGACGAAAGTGTCAAGATCCGCTTCATCGTTTGACATGATGT
CAAATAAATCTTTATCACGATCTCGCCATTCAAGCAGACAGATGGGATTG
AAGTCTAAACAATCCAGTCGAAGATCGAGGTCTGTGCGTAGTCGGGGTAG
ATCATATTCGCGATCTCGCCATTCCAGTCGAAGAACGAGCTCTGTACGTG
GTCGTAGTAGATCTTATTCGCGATCTGGCCATTCCAGCAGAAGAGCGAGC
TCTGTGCGTGGACGCAGTAGATCTTATTCGCGATCTGGCCATTCCAGTAG
AAGAGCGAGCTCTGTGCGTAGTAGCAGTAGATCGTTTTCGCGATCTGACT
TTTCTAGTCGAGGATCAAGGTCTGTGCATAGGCGCAGTAGATCATTTTCG
CGATCTGACCGTTCCAGTCGAGGATCGAGGTCTGTGCATAGGCGCAGTAG
ATCATTTTCGCGATCTGGTCATTCTAGTCGAAGATCGAGGTCTTTTCACT
CGAGCGCAAGCTGTTATTCGAGGTCCAGTTATTCGGGCGCAAGTTCGTAC
TCAAGGTCCGGTCAATGGAGCGGAACATCTTATTCCAGATCCGGTGATTC
ACGTTATTATAGTTCAAGATCCGGCACCAGTCGAGAAAGATCACGCAAAA
ATTCCAGACGAAAATCAGATTCGCATACGTCTACTGAATCGACTGAAGTT
TTAATTTCAAGATGCGATGGAAATTCATTCTTTAAGACTTTTGAAGCTAT
TCAAGAACCAGCTTCTGTGGTCCATTTGGATGTGAGATCTGGAACATCAA
GACGATCGAGATCAGCAAGTCGAGAGATATCAATTGAATCGAAGAAGGAT
TCGTCATCTGGCGACTGGTCGGACGGTGTAAAACATGGCTCAAAATCCGA
TCGTTCAAAATCCGATTTAGATGGAGACGCTTCCGATATCCCGATTTCAA
AAGGTTCTCACAAATCACACTTATCAGCGAGAAGATCTTCTCGGAGAAGT
AAGAGCAACATGTCATTATCTGTTGAACCAAAGAAAACGGATTCAAAGGA
GACCGTGAATGAAAACCAAAAGGAAACCGATGAAGAATTCTCCTCTGATG
ACGATCGAGTTCGTACTGATGATCAATATTCAGACAGCGAGTTCCCGCTC
GACGATCCATCAACAATGAGAATTGATAAGCGTACAGGAAAAGTCAAGAA
ACGAAAGAAGACCTTGGTCAAAAAGAAGTCCAAGAAAAGCGACAGACAGA
TTGAATTACCGCCCTTGAGAGGCGGATTAACACCATCAGGAAACTCTGGT
TTGAATGTCGGTGCACTCCCGTCAATCACAATG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041314	XLOC_041314	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00065947-protein	TCONS_00065947-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_448	supercontig	scaffold_448:231287..239002 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0885297	0.0449068	0.0592118	0	0.0160321	0.00561224	0	0	0	0	0	0	0.00811682	0	0.0666179	0	0	0.0193178	0	0.00763621	0.0277697	0.0715053	0	0.0182643	0.00974609	0	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00065947 vs. Swiss-Prot (Human)

BLAST of TCONS_00065947 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00065947 (transcript) - C. hemisphaerica