TCONS_00066132 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066132
Unique NameTCONS_00066132
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1307

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066132 ID=TCONS_00066132|Name=TCONS_00066132|organism=Clytia hemisphaerica|type=transcript|length=1307bp
AAGAGTCTTGGAATAATTTCTGTTATTTTGCGCAAATTCTAAGCAGAAGA
ATATAAACGGGTAGTGAAAATGAAACTGTTCCTTGTTTTGTTGTTAGTGG
CAGCAGTTGCAGCTGTACCACACTGTCCACATGGAGATTGTGATTGCAAA
TGTCCATGCCATCGTGAACTGAAATTGAAAGAACATTCTGACAACCAAGT
CCGTGCTGTGTTGAAATCTCTACGAACCATTGATGATGAAGCCATTGTGA
ATTTTTGCGCCAATCTGGAGAATGGCAACTACGCCCATCCAACAGGATGC
GAAAAATATGTCGCATGTGCCAATCACATCGCTTACACGATGCCGTGCCC
AGCAGGACTCCATTTCAATCACGTGTTAAACAAATGTCTTGAGCCAGAAG
AAGCACATTGTCTGATGTTTGCTGGAGAAACTACTTTTGCTGCTAAGGGA
AGAAAACCAGGACGTGTCAGTTTAGCCCATCTTCCATCCGGTTTGATCAG
TCAAGTTCGTTTGGAGCACGTATCAGGATCGGTCACGTGTACACAAAATG
TCGCACCAAGCTACTGGGGTTGTAATAATAACCAGGCCACTTATACTTCA
GAGATCATTGGAACACTCATTACTGACGCTGTTGAAACGAAAATCTTCGA
GAAAGAAAGACTTCCCGGATTTACCGGCAACAGCCCATTCATCACTTTCA
ACTCTGCTGTCATGGATATCCCAGCTGTTCATACTTCGGAATTGACTGAC
TTAGAATTATTGGTTTGGTATAACGAAGACTTCAACCAAGAGACCACCAG
TGATGATAGCGGTGAACACGTGATCAGAGTCCTTGTTACCATGGATACCG
ATGTTGACTTGGAGTTGGCCACGAGACAAAGTGAACAGAAAACAAAGACA
GCCCAAGAAGAGATCCCAATGGACGAAGAATGCGTTGGACGCGCTGATGG
AAACTATATCCATCCTTATGAATGCGGACTCTACTTGACTTGCTCTAATG
AAAATACCTATGTCATGAAATGCCCTGCAGGACTTCACTTCCACTTCGAA
CTGAACATGTGTCACTATCCAGAAATCGTTCAATGCCAAATTTTAGTTGG
ACAAGTCACATTCGCTGCTAAAGGAAACAAACCAGGTGTCCTTAAATTGG
ACAACACTTTGAACGGCGAAATTACACAAATTCGATTGGACTTTGTTTCT
GGATTTGTCAAATGTTCTACCAACAGTGAGCCAAGCAAGTGGGGCTGTAA
CAATTCACCTTCATCCAACTTCCCAACTGAGGTACGTCTGAAAATATTCC
AGCTAGC
Run BLAST on NCBI

protein sequence of TCONS_00066132-protein

>TCONS_00066132-protein ID=TCONS_00066132-protein|Name=TCONS_00066132-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
MKLFLVLLLVAAVAAVPHCPHGDCDCKCPCHRELKLKEHSDNQVRAVLKS
LRTIDDEAIVNFCANLENGNYAHPTGCEKYVACANHIAYTMPCPAGLHFN
HVLNKCLEPEEAHCLMFAGETTFAAKGRKPGRVSLAHLPSGLISQVRLEH
VSGSVTCTQNVAPSYWGCNNNQATYTSEIIGTLITDAVETKIFEKERLPG
FTGNSPFITFNSAVMDIPAVHTSELTDLELLVWYNEDFNQETTSDDSGEH
VIRVLVTMDTDVDLELATRQSEQKTKTAQEEIPMDEECVGRADGNYIHPY
ECGLYLTCSNENTYVMKCPAGLHFHFELNMCHYPEIVQCQILVGQVTFAA
KGNKPGVLKLDNTLNGEITQIRLDFVSGFVKCSTNSEPSKWGCNNSPSSN
FPTEVRLKIFQL
Run BLAST on NCBI

transcript from alignment at scaffold_451:287601..296640+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066132 ID=TCONS_00066132|Name=TCONS_00066132|organism=Clytia hemisphaerica|type=transcript|length=9040bp|location=Sequence derived from alignment at scaffold_451:287601..296640+ (Clytia hemisphaerica)
AAGAGTCTTGGAATAATTTCTGTTATTTTGCGCAAATTCTAAGCAGAAGA
ATATAAACGGGTAGTGAAAATGAAACTGTTCCTTGTTTTGTTGTTAGTGG
CAGCAGGTAGGTTAAACTATAATAGGCTATTTTACAGTCGCTAAGTGTAA
TGTGCAATCAGGACCACTTCAAGCTAATAACAATTTACTtttggtcttat
ttttaaaagaattttgaagatttttgcgtctaaccaacgggAAACTGTTA
TCGGGCGcgatcagtcctgattacccatgatccatttcgactgtgaagtG
GGCTATTCTTTTTAGCTTTTGAGGAGTGTTTTAGGGATCCAGAATGTAAG
TAcaccatataacgttagatgaacgcattgaaacaacgttgtgtgccagc
tgggtctgGTTGCCGTTGGAGTGGCCGCTGGGAGTGAAAGAttttatccc
cttttctatttgcgttAGACTGAATGCTGATGTGGAGCGCTACACCTACT
CTCAGTTCTCAATAacttagatcagattacccaatctaagctgcTCATTC
GCTGATTTGGTGGTGACCGGGAATCAAACCATCAACCTCAACCCTTGGAC
tataaggcgaatgctctaccggcTGAGGGCTGAGCTACCCGGTCATTATT
GTCTGTAAGAATCCTGATGATACCACTTAAAGAGTTTATTATGCTTCTTT
TGGTGTTTCATAGTCATGTGATGTTAGACTTTACAAAGGGTGGCTGTCCG
AAGCTATGAACAGGTCGTTAGATTACTCACAGCTACCTTAGAAAGTAGGA
TAACTGTACAACCGTAAGCGCGGCCCTACATTTTCAGCCCTCCCAAAACG
CACGACATGGGTTGATTTCAGAGACGGTGTACTGTTAGGGTGTATGAAGT
GTGTAAAGTGTATGAACATAAAAAGTCTTTCAGCAAATCCAAGCATTCAT
GCCCTAAAATAGATTAAACGTGAGGTTAGATTTGAACAAGTTTGCTTACA
GCTCTGGTAATGGCTGGTACCATGATTGATGTCTAAATGATTTATGTGCT
TTAGGTAAAATTCTCTAAACGCTATTTTGATAACCAATAATATTAGGAAG
AGGAAAGAAGAGTCAAGGGAACTTTTATCAAGCGTTTTTGAATTCGATTC
GTTTTGTTTTTTCAGTTGCAGCTGTACCACACTGTCCACATGGAGATTGT
GATTGCAAATGTCCATGCCATCGTGAACTGAAATTGAAAGAACATTCTGA
CAACCAAGTCCGTGCTGTGTTGAAATCTCTACGAACCATTGATGATGAAG
GTAGGTGGAGAAATTCCAACCATGTACGAACCCTAGGGTTGCAAGGATTG
ACCAAAACTCCAACCATGTACGAACCTTAAGgcctacttagactacacaa
caATATATTGGGGAGCAATATTCGACAATGTATTTTACGGGCCGTAATAT
TCAGAGCGAACAATTGGTATNATATATTGGGGAGCAATATTCGACAATGT
ATTTTACGGGCCGTAATATACAGAGCGAACAATTGgtattttattataaa
aaggaattttctttcggtaaacaattcccctatattgttggaatattgca
aatgaagctgacaatatattgcgtaCTCCTTTTATCAATCAAattattgc
ctgacaatatattgtgtagtgtatataGCCCTTTAGGGTTGCAAGGATTG
ACCAAACTTGGCAGGCGTGTCCgagtaaaatattcaaaattgacGTTTAG
GGAGAAAAAGCCAGATGACGTACTAAATTCCTGCATGATAAATGTGGCTT
AAAGCTCATAGATAGCCGAACCGTTTTTATGTTGATGCggtaaaaacaaa
ccaaaagacTTCTAAAGAACACAGATCCACTGGGGCcctaccactgacct
ttatataccctggacaaagcttctcaatcccagccaagcaaaatctttga
tcggagttttttgaaaattggtaccctaatgtcggcactactcgatagcg
gtgtaaatgcatcgagagcgctaggtctacttttcctcaaattcttttga
tgatgcagcggcgttagacgttaatttttaacattgcaatggcttctcct
tgggtaccaattctaaaaaaactccaatcaaagatggcagatattgtttg
gtccagggttatataaaggtcagtgggccCTACCCCcactagaaaattta
gaaaaaaaattcgttcccacggggaaaaataccctaaagTTTCAGCCTCA
CTGAAACTTTGACTTTTATATCATCCGCATTCGAtttcattgtttagaaa
tagcactccaaaaccattcccgctagattttttaaccttgggacgataga
atttttatccccattgagatttcaatcgaggtttttatccccgctgtcgg
aaaaagtttcaccggggccgTGAGATAGGTGTGTTAAAGAGTATCACATT
ATATTACCTTATGTCATTGGTTCTGTATAATCTTTTTTACATCAGATGTC
TTAGTCAGTGGAGTCTCCactcaaatttgttcgagttaaggaaatttcga
gttatagaggttcgagttaaataAGACACTGCTGTACTCAAATTGACACG
ATTGACTTTTTCGTGAATTTTTGCCACCTGCAAACCATAGCTACGCAAGA
ggaacaaaaatttgttcgagttaaggaaatttcgagttatggagtaagat
ttATAAGGCATTGATAACTGAAGGGTTGAGAAagcttgtttgagttaagg
agacgttcgagttaaagaggttcGTGTTAAAGAAGGCACTACTGTACTCA
AATTGACACATCGTGATTTTTCGTGAATTTTTGCCACCTGCAAACCATGA
AAATTCTCTGGTTAAGTTTCTACAGTGGAGTTTCTATAACTACGCAAGAG
GAAACACAAATTCGTTGGAGTTAAAGGGACATAatagtactgacgaaatt
tgtaaacaaactgtatgcagcgggatgcaaaatctaaacaaatgtcacat
gtcaaaataaaaagtaaaaacaaataTCATTTTGactgtttcaattgttt
taaaagtttgttttggacacttGATTTAAATTATTCtgtttaatgacacg
tggtttgcgcaatgtttacattttaatacttttatgtccctttaagggaA
ATTTTACCTACAGAGACTCCACAGCTAAACCAAAAttgatgataattttt
tttttatattcctATGTTTTTAGCCATTGTGAATTTTTGCGCCAATCTGG
AGAATGGCAACTACGCCCATCCAACAGGATGCGAAAAATATGTCGCATGT
GCCAATCACATCGCTTACACGATGCCGTGCCCAGCAGGACTCCATTTCAA
TCACGTGTTAAACAAATGTCTTGAGCCAGAAGAAGCACATTGTCTGATGT
TTGCTGGAGAAACTACTTTTGCTGCTAAGGGAAGAAAACCAGGTTAGTAT
TCATTTGGCAAATGTAAGCCAACAATTTAAGAGCGAACCatggtgcagtg
gtagagcatccggctacggttcgcaagatTGCGAGTCCAATCCCCacccg
ggtcataccaaagattcgcAAAATAGTACttaatgcctctctgcttgata
caCAGCAGTTAAGAGAAGTACCAAGGGTAattggagaaatccagggagaa
agagtggcgtccTCCTCTTCCTTTGGGTAGATAGTTatcaaaagaggagc
ctttgggtcgcctcCGGCTGTGGTTGCAGAGTTACTTATTTGCTTGGCTG
TCATCCATGTAATGTTATGTTCTCGCCCTACTGAACTGACTTTTTTctca
tttaaattcaaaattcaaaggtaaaaattgcactccCAAACTATCCTACC
TGGACTGaataactatcaaagaacgccTCAGCCTCGTCCCCGTGATTTCA
tacccactcgaaattcaatttttaaaaattgcactctagaaccatcccca
atgaatttttttgcatgaCCTTGGAAGAATATGATTTTATCTCCATTAGA
ATTTCGATTTTCGTCTAAGTAATTCCAAAACTCTTGAAAATATTggatat
tcttaatattttgagttttaagccttaaaatgttcttaatttgttcttaa
tattttgaccatcgaaagccttgtgttcttagaTAGAAAAACTTGTATAA
CACTTaatctagcaagctagacgaatAATTCCGACATAgcagaaataaag
caaaaagtaatggagggaataattttagtttatacgaactaaatcccgta
acaataatcgtattatcatataacgccttactactgtattacacgcatta
taaacgaatCCAGTCTAGTATAACACCTTTATCTCATCATAGGACGTGTC
AGTTTAGCCCATCTTCCATCCGGTTTGATCAGTCAAGTTCGTTTGGAGCA
CGTATCAGGATCGGTCACGTGTACACAAAATGTCGCACCAAGCTACTGGG
GTTGTAATAATAACCAGGCCACTTATACTTCAGAGGTAAGTAAGTatcaa
aggttttatttttacataagtgttcccgtttcatatcagacacatatttc
atatcagcacagtgtctacctattgttatattatgctgatatgatcaaaa
aaatgtttttcttttcctcttacTGACCAATCTttctccacatctgtgtc
aattcaatgtgaaaaagcttgtgaattgaaaattatgatcagtaagcaaa
caatatcactctttTTTAAACACAAATCCTTTAAGAGGGAAACCCTccaa
aaaagtgttttgataCTCTGAAATTCAACGAAAGTTTAACGTGCACCAGT
AGAAATGAACGCTTAGAAAAAATCCCCTCGTTGAgaggttcaaactttaa
agggaAAATCTATTTGTTTTGCGCTGTCAGCTGGTGTTTTTATATCATTC
TTAAATCGCGtgattttccaatatttttcataacaTAGTTTTGTCCCCCC
CCCCTCCAGTTAATACCGAGTTTACGTATGtctgtttttcagcgacggag
acggtaaggttctaatttgactagatcatgaccaactgaggacgacgatc
atcacttttaccgtcctcgattttgcggggcagaattgcgggttattcca
aatcgattcagtcactttaccgtcctcaaaagcgcaaatacataaactcg
ctaatgattCCATAGCCAGTCTCCATATTAACTCGATCGAGCTTGCGACT
CGATCTCCATTTTGTGTTTGAGATTCTGTAAATatgatatattttatatt
tcGCACCCTAGCACTTAGTTTGTTTTCCTGTGATTCTGATGTGGTCACAA
AAAGTCCATCAGAAGGAAAAGAATATGGATGACTCTATAGGTTGGTACAA
AATTGATGTAATTGAATCGGTTAATTTGACAATAAGATATTTATTCATCT
TTACAGATCATTGGAACACTCATTACTGACGCTGTTGAAACGAAAATCTT
CGAGAAAGAAAGACTTCCCGGATTTACCGGCAACAGCCCATTCATCACTT
TCAACTCTGCTGTCATGGATATCCCAGCTGTTCATACTTCGGTATGGTGT
AATTCATGTGCTTGTTTTATTCTCCCAttggaaaattggccaaaatatta
tcCCCAAGACAATCATACTCATATTTTTGTcaacactgaaaataatcaga
gaAGCAAATCCGCACTGCAAAACACTGTGCTAATTTTTCTATCCCCACTC
AATTTCctggcttgaaaacaatagaattcaaatccccattCGTAATAGAC
TTGGGAATATCAAAAAGCCCATCGAGTTTTTGTCCGTTTCTCCTACCCAG
TCTGTGAAAAGGAGGTGTAGCTAGTACACGTCAAAGTGCATTTTTTGACC
AGGCCTAGTTAAATTACACGAATCCTTACGCCGGTCTTTTGACATAAGTG
CGTCAAGTGAATTTTTAGACCTGGAGAACCCTTACGCCGACCCCTATTCG
CCAGCGACGAACACAATACACATAAGGGTCgccgtaaaaagggccgataa
ggtattataACTTTCCTTTGTTGTTTACAGGAATTGACTGACTTAGAATT
ATTGGTTTGGTATAACGAAGACTTCAACCAAGAGACCACCAGTGATGATA
GCGGTGAACACGTGATCAGAGTCCTTGTTACCATGGATACCGATGTTGAC
TTGGAGTTGGCCACGAGACAAAGTGAACAGAAAACAAGTAAGATATATCG
CCCTTCATCTTTTACATTACCCTCAATGAATTGTCGATGTGAGAAGAATC
TGcaaaatatttgacaaaaaatttctatCTTTAGCGTCATTTATATTAAG
AAAAACGATCACTTGTTCCATAGTATCCACATACATGTTGGCAAAATGGG
CCTTAATTCATCATAAAAACCATGAAATCCCCATTGCAAAACTTCACTGA
GTTCTCTTACAAAACGAACTCACTTGTAGCTAAGAATTTCTCATTGGGAA
ATCCTTGTGCGTAATTCCTAGGTTGAAACGATACAAGCTGAAGTGTTGCT
TACTTACATTGCACCCCTTTGTCACATACCCACTCGGACCCCAGTCCCGc
ttgaaaatttggccaaaatctcGTCCCCAGTTGGAAAATACCCTGGTATT
TTAGCCCCACTGTAAAGTTatgcaaaaatttcgtccccggtgggaaaata
ccctgaaatttcagccccaccgggaaattgactttaatgtcatccccact
cgaaatttaATGTTTGAAAGTTGCACTCCATTTCATCACTTCCACTgcat
tttttaaccttgaaacaataacttttatctccgctgaggaaaaaagttcc
accgggggtGTGAGTTGTTAAAATGCAAATAAACGCTATTTATTTCAGAG
ACAGCCCAAGAAGAGATCCCAATGGACGAAGAATGCGTTGGACGCGCTGA
TGGAAACTATATCCATCCTTATGAATGCGGACTCTACTTGACTTGCTCTA
ATGAAAATACCTATGTCATGAAATGCCCTGCAGGTAGGGTTTTTTTAGAG
ATTCGTCTTTCTTTTTAGCAGATAACATCTCAACAGGCActtaacgttgt
ttcaacgtgcgagcgttcacaacgtctatataacgttagatgaacgctga
aaacaacgttgtgtggcaGCCTGGATAGGCGGTTTTACCATGTTGAACTT
ATTAGAGATTCATCTTTTTGTAACAGATTTAAGCGAGTTTATCCCtaaaa
attttatgaattttagtAAAATGTTTTTNgcacataacgttgtttcaacg
tgcgagcgttcacaacgtctatataacgttagatgaacgctgaaaacaac
gttgtgtggcaGCCTGGATAGGCGGTTTTACCATGTTGAACTTATTAGAG
ATTCATCTTTTTGTAACAGATTTAAACGAGTTTATCCCtaaaaattttat
gaattttagtaaaatgttttttacgAATAATAACACCTCTAGGCAGAAAG
CTCTTGCATTTACCATCAGGTACCTAATATAGGGTATAGTTTAGGAATGT
CGTTACTCTtttgaaggaaatattttttatttcggCATCTTTTGCCTTGA
CCTTATATTGAATTTTTGAGGTCCTCCCGCCTTGAGtaagactacacgtt
ttttctttgataagaacatccagaatttttgaagccttcagacgTGGCCT
TATATTTTCAGGTTTCAAACCAaagaatgttcttaatatgttcttatttt
cagcattttgagtatttttgtccattttcacacgaagccttaaaatgttt
ttaacttgttcttaagattttagccactgaagccttatgttcttatatag
tttgttcttataaaaaaacgtgaaatTCTATTTTCGTGTATCAATTTCTA
TTGTTGTAGttcattttctttctctttttgtaGGACTTCACTTCCACTTC
GAACTGAACATGTGTCACTATCCAGAAATCGTTCAATGCCAAATTTTAGT
TGGACAAGTCACATTCGCTGCTAAAGGAAACAAACCAGGTATagcaaaga
tttccaaaatggtacttgatccCTCTTTGCTTGAtgttcagcaattaaga
gaaggatcaagggtaagcgggaatccagggagaaagagtaaCGCCTTATC
Ctatcttcgggtagatagctatcgaaagaagagccttcgggtcgactccg
actgtggtcgcagacttacttacttagtaAACTTTGTACGCTTAAAGTAT
TCTCAACGTGATCGTTATGTGAATACTCTTTACcggagtgtatctcacgt
ttatcgcttcatACTCTGTGCGCACTCTCtgtttattgataaaaaagtcc
cGTACGGTCAACCTCTGAGGTGAATTATGATTATTGTAAATAGCAATACT
CCTCTCATTGTCTCCcttctctcaccaacactccatcgcagcggtcggtt
tgaaaaatctcaaattagaAAAGACATTGataacagaccctctacggcaa
tatattttgaatttagATGCAAGGTCTATGTACACACAATATATAGAATT
GAAACTTAACATAAGCCCCATTTGGCCGAACACCTCTTTATCATAGAAGC
TACCAAAACCCTATTAGAAGTTGTACTCCTTCATTCTTAACCCGTACTGC
GCAAAATGTATATATTTtcttgatttaattttttaaatgaggCTGAAACT
AGCTAAAGAGGGCTCTGAAAAGGGATTATTTGTACcaaaaaagtttgata
tttCGAACATTACCAAACTGACTTAAGTTATCTCACCTAGTTGCTGAGCC
AGGGGTATGGCGGGGTTCTGACATGCTTCAAAATTaaaagttcttaaaat
attAGCTTTTGCTTCTTTTCATCTTTAGGTATCTTTGAAGTAATGATATC
TGCTGGTTTAAATTTTAGGTGTCCTTAAATTGGACAACACTTTGAACGGC
GAAATTACACAAATTCGATTGGACTTTGTTTCTGGATTTGTCAAATGTTC
TACCAACAGTGAGCCAAGCAAGTGGGGCTGTAACAATTCACCTTCATCCA
ACTTCCCAACTGAGGTACGTCTGAAAATATTCCAGCTAGC

Coding sequence (CDS) from alignment at scaffold_451:287601..296640+

>TCONS_00066132 ID=TCONS_00066132|Name=TCONS_00066132|organism=Clytia hemisphaerica|type=CDS|length=1236bp|location=Sequence derived from alignment at scaffold_451:287601..296640+ (Clytia hemisphaerica)
ATGAAACTGTTCCTTGTTTTGTTGTTAGTGGCAGCAGTTGCAGCTGTACC
ACACTGTCCACATGGAGATTGTGATTGCAAATGTCCATGCCATCGTGAAC
TGAAATTGAAAGAACATTCTGACAACCAAGTCCGTGCTGTGTTGAAATCT
CTACGAACCATTGATGATGAAGCCATTGTGAATTTTTGCGCCAATCTGGA
GAATGGCAACTACGCCCATCCAACAGGATGCGAAAAATATGTCGCATGTG
CCAATCACATCGCTTACACGATGCCGTGCCCAGCAGGACTCCATTTCAAT
CACGTGTTAAACAAATGTCTTGAGCCAGAAGAAGCACATTGTCTGATGTT
TGCTGGAGAAACTACTTTTGCTGCTAAGGGAAGAAAACCAGGACGTGTCA
GTTTAGCCCATCTTCCATCCGGTTTGATCAGTCAAGTTCGTTTGGAGCAC
GTATCAGGATCGGTCACGTGTACACAAAATGTCGCACCAAGCTACTGGGG
TTGTAATAATAACCAGGCCACTTATACTTCAGAGATCATTGGAACACTCA
TTACTGACGCTGTTGAAACGAAAATCTTCGAGAAAGAAAGACTTCCCGGA
TTTACCGGCAACAGCCCATTCATCACTTTCAACTCTGCTGTCATGGATAT
CCCAGCTGTTCATACTTCGGAATTGACTGACTTAGAATTATTGGTTTGGT
ATAACGAAGACTTCAACCAAGAGACCACCAGTGATGATAGCGGTGAACAC
GTGATCAGAGTCCTTGTTACCATGGATACCGATGTTGACTTGGAGTTGGC
CACGAGACAAAGTGAACAGAAAACAAAGACAGCCCAAGAAGAGATCCCAA
TGGACGAAGAATGCGTTGGACGCGCTGATGGAAACTATATCCATCCTTAT
GAATGCGGACTCTACTTGACTTGCTCTAATGAAAATACCTATGTCATGAA
ATGCCCTGCAGGACTTCACTTCCACTTCGAACTGAACATGTGTCACTATC
CAGAAATCGTTCAATGCCAAATTTTAGTTGGACAAGTCACATTCGCTGCT
AAAGGAAACAAACCAGGTGTCCTTAAATTGGACAACACTTTGAACGGCGA
AATTACACAAATTCGATTGGACTTTGTTTCTGGATTTGTCAAATGTTCTA
CCAACAGTGAGCCAAGCAAGTGGGGCTGTAACAATTCACCTTCATCCAAC
TTCCCAACTGAGGTACGTCTGAAAATATTCCAGCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041403XLOC_041403Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066132-exon-scaffold_451-1491911889:287601..287706TCONS_00066132-exon-scaffold_451-1491911889:287601..287706Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:287601..287706TCONS_00066132-exon-scaffold_451-1510915933:287601..287706Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:287601..287706TCONS_00066132-exon-scaffold_451-1575043694:287601..287706Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:288766..288900TCONS_00066132-exon-scaffold_451-1491911889:288766..288900Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:288766..288900TCONS_00066132-exon-scaffold_451-1510915933:288766..288900Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:288766..288900TCONS_00066132-exon-scaffold_451-1575043694:288766..288900Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:290824..291042TCONS_00066132-exon-scaffold_451-1491911889:290824..291042Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:290824..291042TCONS_00066132-exon-scaffold_451-1510915933:290824..291042Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:290824..291042TCONS_00066132-exon-scaffold_451-1575043694:290824..291042Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:291943..292085TCONS_00066132-exon-scaffold_451-1491911889:291943..292085Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:291943..292085TCONS_00066132-exon-scaffold_451-1510915933:291943..292085Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:291943..292085TCONS_00066132-exon-scaffold_451-1575043694:291943..292085Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:293007..293141TCONS_00066132-exon-scaffold_451-1491911889:293007..293141Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:293007..293141TCONS_00066132-exon-scaffold_451-1510915933:293007..293141Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:293007..293141TCONS_00066132-exon-scaffold_451-1575043694:293007..293141Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:293631..293787TCONS_00066132-exon-scaffold_451-1491911889:293631..293787Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:293631..293787TCONS_00066132-exon-scaffold_451-1510915933:293631..293787Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:293631..293787TCONS_00066132-exon-scaffold_451-1575043694:293631..293787Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:294449..294583TCONS_00066132-exon-scaffold_451-1491911889:294449..294583Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:294449..294583TCONS_00066132-exon-scaffold_451-1510915933:294449..294583Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:294449..294583TCONS_00066132-exon-scaffold_451-1575043694:294449..294583Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:295484..295588TCONS_00066132-exon-scaffold_451-1491911889:295484..295588Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:295484..295588TCONS_00066132-exon-scaffold_451-1510915933:295484..295588Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:295484..295588TCONS_00066132-exon-scaffold_451-1575043694:295484..295588Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1491911889:296469..296640TCONS_00066132-exon-scaffold_451-1491911889:296469..296640Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1510915933:296469..296640TCONS_00066132-exon-scaffold_451-1510915933:296469..296640Clytia hemisphaericaexon
TCONS_00066132-exon-scaffold_451-1575043694:296469..296640TCONS_00066132-exon-scaffold_451-1575043694:296469..296640Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066132-proteinTCONS_00066132-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:287601..296640 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.32806	4.09611	12.585	7.26581	0	0.0344324	0.0415412	0.116671	0.0544561	0	0	0.0215191	0.0214892	0.111584	0.0183474	0	0	0.0248615	0.103043	0.107827	10.5592	5.25709	2531.3	2015.64	0.0346911	0.061922	1073.82	884.44	21309.1	17889.4
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066132 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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