TCONS_00066703 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066703
Unique NameTCONS_00066703
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1941

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066703 ID=TCONS_00066703|Name=TCONS_00066703|organism=Clytia hemisphaerica|type=transcript|length=1941bp
tacaGGTAGAAGATGAATACCAAAAGGCAAAGGACATTTTCATTGATATG
ACTTCGGAATTATATGAAGAGCTCCCTGCATTGTATGACAGTCGAATTGG
GTTCTATGTTTCCTGTTTTCAAAGTATATTCACGTTGGAGGAAGTTTTTC
ATCGCGAGGCTGCTGAACTCAATCACAACTTGAACGACTTGATGGACCAA
CTTATAGCGGACTTCTCGGCTGGAACGTTTAGCACTCGTAAACCCTTCTC
TGCTGGCATTGAAAGCAGCTTGAATGTATCAGAAAAGGAAAAAGACGATA
CAAAACTCTCCAGCGGGAGTCTTGCTCAATTTTACGACGTTGCAGTTCCT
GACGCTGAAGAAGTAGAAGAACATAACTCTTCCACAGAAACGCCCCACCA
ACAAGATACACCTCCAACCCAAGATGAAACAGACGCCCTTCAACCGCCCT
CACATTACGATGCACCAAACAGCGAAGATATAGATTCGACTCCCCCGCCC
GCCGTACCATCACAGCCTACGCGACCTGCACCAACTCCGCCCCTGACGTC
TTCACCCGCTCGCCCCAGCCAACCAGAACTATTTACGGTGGGGAAGGAGG
AAATAGATGGTGTAGTTGAACACGAACATGGAACAAGCAAAGAAGAACAA
GAACCTGATGAGGTAGATCCCTTAGAAAATTCTTCTTCAACATCACAGGC
ACAGGAAGAAAATTCTCCAGAAGAAAACCCTTCTGCGTCGAATACAGTGG
AAGGTTCACTGCCAGCAGATTCTAATTCAGTTTCAACGAGGGCGGACGTT
TTGGCTTATAGAAATGTTCCTTCGCCTGAAAATCCCTGTAATTTAGTTGT
ACCCAATGCAGTATATAAGGCGATAGCAACGCATAAATACAGTCCTGAAG
ATGAAGACGAACTCTCCTTCGAAAAAGGGGAGATTATTCATGTCATTCCG
TACGATGATCCAGAAGAACAGGATGATGGCTGGCTGATGGGTGTGATGGA
CTCTAATGGTTTTGTTGGTGTTTTCCCAGAGAACTTTTCAAAGCGTCTTT
CACCTTCTTGACGGAAATTAACACAGAATACAAAATGTTGATGTATTTTT
TCGGTGGATTTAACGAAAATATTTCCTCTTTAAAACGAAAATTATGCAGA
TCTCGCCTGTTTCAGCTTCAGGATGCTAAGAAAGTATTGGTGGTATGAAC
AATTTTAATTGCTTTCCTATGAAAAGCTGACTatcgaatgttttcttttg
tttaaagttTTGTTCCTTGCTCTCTTTGGTGCCAGGTATGTAAGAATTTT
TCTTTGCAAGTTTTTAGTTTACATAATGCCGCTATTAAAATACACCTACC
AaccaaaaaaaagtaatatGATTAGACTCGATTCACCAGGTCAAAGCAAC
GAATATCAAATTTTGACTGGGAAACACTTGAACCGATTTTCCACGAAGTG
TTTGTGTTGATAGCTGTCATTAAGATTCGATTGTCTCTTATAACGATTGA
AGCTGATCGTTTATGATATTTTCAGGGGACAAGGTATACTATTTTTGGAA
TTAGCTGACCgtttaaaacatcaaatttggatGATATGACCCACAAAAAT
CCGAAtttcagtttttcttttatgtaatattATTCGTATAAAGGGAATat
gtatttttgtaaaattttgattaataGAGCATTGTATAGAGAGAGTGACA
ATTTTGAGAAGATTGAGTGGATTTAGAGCTTAAGTTTTGCATTTAGTAGT
AAGATCTACAGCTTCGATGCTTCTTCACGATCAAGCCTTATCTATATCTT
GATAGCTTGACATCAGATTGGACAGAGAGAAGTCGTGGacattgtacacg
tttttttttttattagaacacctaaaatttggctgagcctggatgtgctt
attttctttagcaattttcagcctaaaatgttcttaaatgc
Run BLAST on NCBI

protein sequence of TCONS_00066703-protein

>TCONS_00066703-protein ID=TCONS_00066703-protein|Name=TCONS_00066703-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
QVEDEYQKAKDIFIDMTSELYEELPALYDSRIGFYVSCFQSIFTLEEVFH
REAAELNHNLNDLMDQLIADFSAGTFSTRKPFSAGIESSLNVSEKEKDDT
KLSSGSLAQFYDVAVPDAEEVEEHNSSTETPHQQDTPPTQDETDALQPPS
HYDAPNSEDIDSTPPPAVPSQPTRPAPTPPLTSSPARPSQPELFTVGKEE
IDGVVEHEHGTSKEEQEPDEVDPLENSSSTSQAQEENSPEENPSASNTVE
GSLPADSNSVSTRADVLAYRNVPSPENPCNLVVPNAVYKAIATHKYSPED
EDELSFEKGEIIHVIPYDDPEEQDDGWLMGVMDSNGFVGVFPENFSKRLS
PS
Run BLAST on NCBI

transcript from alignment at scaffold_458:93522..99590-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066703 ID=TCONS_00066703|Name=TCONS_00066703|organism=Clytia hemisphaerica|type=transcript|length=6069bp|location=Sequence derived from alignment at scaffold_458:93522..99590- (Clytia hemisphaerica)
TACAGGTAGAAGATGAATACCAAAAGGCAAAGGACATTTTCATTGATATG
ACTTCGGAATTATATGAAGAGCTCCCTGCATTGTATGACAGGTAGGAAGA
CCTCATTGCTTATCATCAATCAATAGAGGTTGAACTATTTGGTTGTATCA
GGGTTATGTACACCTATCAACCTGTTACAGCGCGGTCAGCTTTCAAGGGG
TCGGGTACTGAGCTTATATGACATTTCTCCGCTTGTGTTTTTCCTGATGA
ATAAATATATTTCATTGCCTATTCAGCAAAACTCGCTGCTATTTTAAATA
CAAAAGAATTGCGCTAGAAGCACTATACCCTTGACTAAACGAGAGTTCTA
TTTCAAAGTGAATTTTTGATCAATAATTGCGTTCTTGTTCCACCTGATAC
TCCTATCTCCATCAGACATCTTTGAATTAGTAACCTCATGATTCTGATAG
GGTGTTCACGCACTCAAAAGATGCACCGGACCAGAATGTGACGGAACGCG
ACGTAGCACTTAGGACATCCTATCGTCTCACTACAAAAATTGGTCCGATA
GGTTTTCTATCGTCTCGAAAATCAGACCATGTTCACACTAACCACTTTCT
ATCGTCACAAAAAGCTATCCGGTATAGTGTGAACATGGTCTAATTAACAC
ATTTTTTCATTTACAGTCGAATTGGGTTCTATGTTTCCTGTTTTCAAAGT
ATATTCACGTTGGAGGAAGTTTTTCATCGCGAGGCTGCTGAAGTATGTAT
TTGGTTTCCCTATATTGTTATAAAACAACTTAAAAAACAACTTAAAAAAC
AACTTAAAAAACTCCTAACAGTTTATTTATATCGGCATTCTCTTGACACG
GCATTATTGTTTTCATCGCGAGGCTGCTGACGTATGTATTTGGTTTCCCT
ATATTGTTAATTCATTCTTTATCCGGAATACTATCTCAGAAAGAAGTCCT
TCCTAATAATGAAAATGTGTTATAAAAAAGAAGGTTAAACCTGAATAATG
AAAAAAGTTAAATACAACTTTTTGTGATTCAATATATATATTTTTTCGGA
TTTGCCTGCATTTTTACCTTTAGGGTTTGATGGGAGAGTCAAAATTTAAA
CTTCAAGGGAATAATAACTAAAATTTGAAGAAAAAAAACAACTTAAAAAA
CTCCTAGCAGTTAATTTTTTTCTCAAGGTCTCTTGATTTCGAGATATTGA
CATTCTTTTGACATGACATGACATTATTTGTACGGTTAAGTAGAGTAAGT
TACAGACCCTTTGATTTTAAGTAATTCCACCATCCAGTCCTATCTAGGTT
CGATCTAAATTACTGTTTTATAGCTCAATCACAACTTGAACGACTTGATG
GACCAACTTATAGCGGACTTCTCGGCTGGAACGTTTAGCACTCGTAAACC
CTTCTCTGCTGGCATGTAAGCGTTCTTTCTTCATTCAAATAAATTCAACT
ATTCTTTTCTTTTCGACGATTCAACAGATTCTGCACAAATATACTTTCCG
ATACTTTCAAAAGTAACGAATCTTTTTTATATTATGAATTGAGCTGATAT
TCTTTTAGAGCAACTCTCTATCTTATAATTTACTTTTAAATTTAAATTTC
CATGATCGCATTTAGTGAAAGCAGCTTGAATGTATCAGAAAAGGAAAAAG
ACGATACAAAACTCTCCAGCGGGAGTCTTGCTCAATTTTACGACGTTGCA
GTTCCTGACGCTGAAGAAGTAGAAGAACATAACTCTTCCACAGAAACGCC
CCACCAACAAGATACACCTCCAACCCAAGATGAAACAGACGCCCTTCAAC
CGCCCTCACATTACGATGCACCAAACAGCGAAGATATAGATTCGACTCCC
CCGCCCGCCGTACCATCACAGCCTACGCGACCTGCACCAACTCCGCCCCT
GACGTCTTCACCCGCTCGCCCCAGCCAACCAGAACTATTTACGGTGGGGA
AGGAGGAAATAGATGGTGTAGTTGAACACGAACATGGAACAAGCAAAGAA
GAACAAGTAAGACATTTCTTGTTTTCCATAATTCATGATATGCACCACTG
CAATGACTTCACGAAATTATGCAACTTTTCTGGTTTTTTTTTCACCCAAT
ACATCACTTTTTCGAAAAGTGCTTGACCCTTTTTCCGCCAAGAAAAAAAT
CAAGATTCCATATTCTTTGTCTTTTTTACGCCATTCTTTTTTTGGGCGAC
CCTTAATATACGTATCAAAACCAAAAATAACGCCGATTGTACTGTAACGG
GCTGGCGAAAAAAGGGTCGATGAGGTATTTCTTCTTATCTTTCCTTCCTT
ACGAACAATATTAGCGAGTTTATGTATTTGCGCTTTTGAAGAAGGTACAG
TGACCGAAGTGATTTGGAAAAACCCGCAGTTCTGCCCCGCAAAATCGAGG
ATGGTAAAATTGCTGATTTACCGTAATCCTCAGTTGGTCAGGGTCTAGAA
AAATTAAAACCGTCTCCGTCGCAGAAAAACACACATACATAAACTCAGTA
TTTATCTTGTTTACAGGAACCTGATGAGGTAGATCCCTTAGAAAATTCTT
CTTCAACATCACAGGCACAGGAAGAAAATTCTCCAGAAGAAAACCCTTCT
GCGTCGAATACAGTGGAAGGTTCACTGCCAGCAGATTCTAATTCAGTTTC
AACGAGGGCGGACGTTTTGGCTTATAGAAATGTTCCTTCGCCTGAAAATC
CCTGTAATTTAGTTGTACCCAATGCAGTATATAAGGTAAGAATATCTGAA
TAAAGAATAAGGCTTGTTCTCGTCGTTGTTCATCAGTTCGAACCTTTTTT
ATCTAGAAATTGTCGAATAAGGGCAAGGCTTCAGCATTGAGCTAGAATCT
GAGATTGTCTGTCTGTGTGTGTATGTCCCAAAACTTTGGGGCAGCCTGGA
GACTTCAAAAATTGTCGGGTTTGGCTGAAATTTGGCACACTGTTTCCTTG
GGTGAATATCTGGAGGTGTTTTTTTCATTTTTCAAAAAATTTTGGAGCCT
GGGGACGATTAAACGATTGGAGCCCTGATTATCGAACGAGGTAATGTTTG
ACGACAATATGGATAAAATGCGAGCAAGAAACGTCTGCTCCGGATTATAG
AGTGGACGAGTCATATTCTGCATATTTTGAGCTTCATAATTTTCAAATGT
ATTACTTGTGGATATTACTATAACTGCATAATATGAAAATCTAATGAAAG
TTACAGTGAAATCTTGGCAAAGGTTTACTCAAAACTGGGTTGTGATTGAA
GAGTTACAGTTTAAAAAAATCCAGTTGAAGAGATTTCGTTATAGTGTTTC
AATCGCAATCACTCTTGAACTTGATTATTCTTTCTCTGTTATAGGCGATA
GCAACGCATAAATACAGTCCTGAAGATGAAGACGAACTCTCCTTCGAAAA
AGGGGAGATTATTCATGTCATTCCGTACGATGATCCAGAAGAACAGGTGA
GAATTGATCTGTTGTCAGGTTAAGTTATCTTAGCCATTATCTTAGCGACC
GTAGTGCAGTGTTAGAGAATCCGGCTACTGTGCGCAAGGTTGTGGGTTCA
ACCCCCAGCTGGGTCATACCAAAGATTTCCAAAATGGTACTATTGATCCC
TCTCTGCTTGATGCTCAGCAATTAAGAGAAGGATGAAAGGTAAGTGGAGT
AGTCCAGGGAGAAGGTCGCCTCCGACTGCGGTCGCACACTTACTAGGTTA
TCTGGCAGATCTTTCCTATAACTGTCAAATATCTTTAAAAAGTCCTTCAT
TAACTTGGAATAGGGCCATGAATATAGGGCCTACTTTATCAAACCTATTT
TCAAGGTAACAAGATAAGGATAAGCCGCTCCAAATTTTGTCGATTTTCGA
TTTCTTATGAAGGGGGTCAATAATTGGGCTGTTCCATTTAAAATCCATAC
AGGGGTTGGACGAACCTTTTCAATGAAAGAAATAATTCTTTAAATGTGTG
GATACCCCCTGGAAAATGGCAAAATTTGCTTTAAAAACATGGAAAATACC
TTTCCTTAATCCCCCTGGAAATTCCTCTTCGAATTACCCCTTACACACTG
AAAATCTATCAGAAATAATCCAGCCCGCAACGCTAATAATATTATTGGCA
CTATTCCACCACCAAATGCCGAACCAACATATTTTTAATGATTGGTTGGA
TTCGAATGATTGGGATTCATTTTCCTTGTGGTTTTCAATCCCTATTTTGT
TAATGAGCCCAAAATTATCACTTTTGGCTCCTTCACAAAATTATAACGTT
TCCATGAGTCCTTATGACGCCCTCATTCCCACTTTTTGTTGTATTACTCC
TTGGAATTCGTTTGATATTGCGTTGGCACCAAAAGCCGATTTCGGAGGCT
CCCTTAGAATATTTATTTATCAGAAAATGAAAACTGAAAACCTATTAGAA
ATGGGCTATATGCAATTTCATCTATGTTTCACCATCTCATTTCACCAAAA
GAGCAAGAGGAGAATTTTCAACCTTTTCTCAGGCAAGAAAGAATGAAGCC
ATACAGTAAGATTAGTGCCGCAATCGTAACGATGGTTTTTATCTAATGGT
TTATTTGTTTTCGAGTGGTACATTAAAAACTTGGCGAAAAATTTACTTTC
AATTCAGCGTAAAAGCCATGCAAAACACTTTTTGGAAAAGCTTTCAAACT
TTTGTTCCCTTCCCTAGAATGGCTATTAGATTTACTTATGATCGAATCAA
TTTTTGATTTTAGGGTGTTATTCTCGTTGTTTAGGATATTTCTCCGATAC
ATTGACTTACATGAAAAATGCTTTGTCTACTCGATGAAAACCAAATTGTG
CCATTTCAATTTCTTGCTTCATAATCTAAAATGGGATTTTGATTTCATCA
TTGCAAAAATTTATTATTGAAGAATACCTCAACATTGTTTTACTTCAGTA
ATGAGCGAGAGTAGATCAAAACATAAAATCTCAATCAATTTTCATCAAGG
ACCCTCGGGTTATATTTATCCGCGGACCATTGTTTTGTCCTTCCCAAGAC
TCATCAGTGCGGCTCGGGTAAGCGAGCATAGACTGCCGTTGTCGCCAATC
AAGACCAGAACTCTCGGGTTATGGAACTTAATTTTCTTTCGCATTTTAGG
ATGATGGCTGGCTGATGGGTGTGATGGACTCTAATGGTTTTGTTGGTGTT
TTCCCAGAGAACTTTTCAAAGCGTCTTTCACCTTCTTGACGGAAATTAAC
ACAGAATACAAAATGTTGATGTATTTTTTCGGTGGATTTAACGAAAATAT
TTCCTCTTTAAAACGAAAATTATGCAGATCTCGCCTGTTTCAGCTTCAGG
ATGCTAAGAAAGTATTGGTGGTATGAACAATTTTAATTGCTTTCCTATGA
AAAGCTGACTATCGAATGTTTTCTTTTGTTTAAAGTTTTGTTCCTTGCTC
TCTTTGGTGCCAGGTATGTAAGAATTTTTCTTTGCAAGTTTTTAGTTTAC
ATAATGCCGCTATTAAAATACACCTACCAACCAAAAAAAAGTAATATGAT
TAGACTCGATTCACCAGGTCAAAGCAACGAATATCAAATTTTGACTGGGA
AACACTTGAACCGATTTTCCACGAAGTGTTTGTGTTGATAGCTGTCATTA
AGATTCGATTGTCTCTTATAACGATTGAAGCTGATCGTTTATGATATTTT
CAGGGGACAAGGTATACTATTTTTGGAATTAGCTGACCGTTTAAAACATC
AAATTTGGATGATATGACCCACAAAAATCCGAATTTCAGTTTTTCTTTTA
TGTAATATTATTCGTATAAAGGGAATATGTATTTTTGTAAAATTTTGATT
AATAGAGCATTGTATAGAGAGAGTGACAATTTTGAGAAGATTGAGTGGAT
TTAGAGCTTAAGTTTTGCATTTAGTAGTAAGATCTACAGCTTCGATGCTT
CTTCACGATCAAGCCTTATCTATATCTTGATAGCTTGACATCAGATTGGA
CAGAGAGAAGTCGTGGACATTGTACACGTTTTTTTTTTTATTAGAACACC
TAAAATTTGGCTGAGCCTGGATGTGCTTATTTTCTTTAGCAATTTTCAGC
CTAAAATGTTCTTAAATGC

Coding sequence (CDS) from alignment at scaffold_458:93522..99590-

>TCONS_00066703 ID=TCONS_00066703|Name=TCONS_00066703|organism=Clytia hemisphaerica|type=CDS|length=1059bp|location=Sequence derived from alignment at scaffold_458:93522..99590- (Clytia hemisphaerica)
CAGGTAGAAGATGAATACCAAAAGGCAAAGGACATTTTCATTGATATGAC
TTCGGAATTATATGAAGAGCTCCCTGCATTGTATGACAGTCGAATTGGGT
TCTATGTTTCCTGTTTTCAAAGTATATTCACGTTGGAGGAAGTTTTTCAT
CGCGAGGCTGCTGAACTCAATCACAACTTGAACGACTTGATGGACCAACT
TATAGCGGACTTCTCGGCTGGAACGTTTAGCACTCGTAAACCCTTCTCTG
CTGGCATTGAAAGCAGCTTGAATGTATCAGAAAAGGAAAAAGACGATACA
AAACTCTCCAGCGGGAGTCTTGCTCAATTTTACGACGTTGCAGTTCCTGA
CGCTGAAGAAGTAGAAGAACATAACTCTTCCACAGAAACGCCCCACCAAC
AAGATACACCTCCAACCCAAGATGAAACAGACGCCCTTCAACCGCCCTCA
CATTACGATGCACCAAACAGCGAAGATATAGATTCGACTCCCCCGCCCGC
CGTACCATCACAGCCTACGCGACCTGCACCAACTCCGCCCCTGACGTCTT
CACCCGCTCGCCCCAGCCAACCAGAACTATTTACGGTGGGGAAGGAGGAA
ATAGATGGTGTAGTTGAACACGAACATGGAACAAGCAAAGAAGAACAAGA
ACCTGATGAGGTAGATCCCTTAGAAAATTCTTCTTCAACATCACAGGCAC
AGGAAGAAAATTCTCCAGAAGAAAACCCTTCTGCGTCGAATACAGTGGAA
GGTTCACTGCCAGCAGATTCTAATTCAGTTTCAACGAGGGCGGACGTTTT
GGCTTATAGAAATGTTCCTTCGCCTGAAAATCCCTGTAATTTAGTTGTAC
CCAATGCAGTATATAAGGCGATAGCAACGCATAAATACAGTCCTGAAGAT
GAAGACGAACTCTCCTTCGAAAAAGGGGAGATTATTCATGTCATTCCGTA
CGATGATCCAGAAGAACAGGATGATGGCTGGCTGATGGGTGTGATGGACT
CTAATGGTTTTGTTGGTGTTTTCCCAGAGAACTTTTCAAAGCGTCTTTCA
CCTTCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041709XLOC_041709Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066703-proteinTCONS_00066703-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066703-exon-scaffold_458-1575043694:99500..99590TCONS_00066703-exon-scaffold_458-1575043694:99500..99590Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1575043694:98849..98924TCONS_00066703-exon-scaffold_458-1575043694:98849..98924Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1575043694:98176..98267TCONS_00066703-exon-scaffold_458-1575043694:98176..98267Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1575043694:97585..97975TCONS_00066703-exon-scaffold_458-1575043694:97585..97975Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1575043694:96856..97074TCONS_00066703-exon-scaffold_458-1575043694:96856..97074Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1575043694:96145..96246TCONS_00066703-exon-scaffold_458-1575043694:96145..96246Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1575043694:93522..94491TCONS_00066703-exon-scaffold_458-1575043694:93522..94491Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1510915933:99500..99590TCONS_00066703-exon-scaffold_458-1510915933:99500..99590Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1510915933:98849..98924TCONS_00066703-exon-scaffold_458-1510915933:98849..98924Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1510915933:98176..98267TCONS_00066703-exon-scaffold_458-1510915933:98176..98267Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1510915933:97585..97975TCONS_00066703-exon-scaffold_458-1510915933:97585..97975Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1510915933:96856..97074TCONS_00066703-exon-scaffold_458-1510915933:96856..97074Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1510915933:96145..96246TCONS_00066703-exon-scaffold_458-1510915933:96145..96246Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1510915933:93522..94491TCONS_00066703-exon-scaffold_458-1510915933:93522..94491Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1491911889:99500..99590TCONS_00066703-exon-scaffold_458-1491911889:99500..99590Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1491911889:98849..98924TCONS_00066703-exon-scaffold_458-1491911889:98849..98924Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1491911889:98176..98267TCONS_00066703-exon-scaffold_458-1491911889:98176..98267Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1491911889:97585..97975TCONS_00066703-exon-scaffold_458-1491911889:97585..97975Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1491911889:96856..97074TCONS_00066703-exon-scaffold_458-1491911889:96856..97074Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1491911889:96145..96246TCONS_00066703-exon-scaffold_458-1491911889:96145..96246Clytia hemisphaericaexon
TCONS_00066703-exon-scaffold_458-1491911889:93522..94491TCONS_00066703-exon-scaffold_458-1491911889:93522..94491Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_458supercontigscaffold_458:93522..99590 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.87549	1.83812	1.80303	1.10862	13.3697	10.4747	11.1925	12.9487	5.08402	8.56626	5.71224	3.87341	6.08392	6.04779	4.69747	5.58079	7.008	5.52518	4.05333	6.16231	4.63733	5.57856	4.5725	5.70241	5.72694	6.50873	7.33518	6.26893	10.2622	11.1397
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR027267AH/BAR-dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00066703 vs. Swiss-Prot (Human)
Match: BIN1 (Myc box-dependent-interacting protein 1 OS=Homo sapiens GN=BIN1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.113e-17
Identity = 38/79 (48.10%), Postives = 56/79 (70.89%), Query Frame = 3 
Query:    3 QVEDEYQKAKDIFIDMTSELYEELPALYDSRIGFYVSCFQSIFTLEEVFHREAAELNHNLNDLMDQLIADFSAGTFSTR 239
            Q E+E  KA+ +F +M  +L EELP+L++SR+GFYV+ FQSI  LEE FH+E ++LN NLND++  L     + TF+ +
Sbjct:  204 QAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVGLEKQHGSNTFTVK 282
The following BLAST results are available for this feature:
BLAST of TCONS_00066703 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BIN13.113e-1748.10Myc box-dependent-interacting protein 1 OS=Homo sa... [more]
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