TCONS_00066729 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066729
Unique NameTCONS_00066729
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2237

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066729 ID=TCONS_00066729|Name=TCONS_00066729|organism=Clytia hemisphaerica|type=transcript|length=2237bp
GATATTTTATCAGAAAGCTGTAAAGTATGGCGTCCACAGTATGGCTATTG
GTCATCTTGACCATCAATCTATTGTCACCAACGACGCTGGCCGAATCTAG
CACGACCACAAACGGCGAAGAAGCAGCCAAGGAGATCAGTAATCGTGTCG
ACGAAATGAAGAAAGCCAATCTCATTTTCGATCCAAAGCTTGACAACAAA
ttggatgaaatgaaaaaatctttgaagAAAGTGAAGCCAGCAACGGATAA
AGGATCTGAAAAACCTAAAGGACCGGATACCATGGCAACAGCTGAAGCTG
TCAACAAAGCTCTCCAAGGGTTACCAGGAATGGTAACTGCGTTGCAAACA
AAAGATTACACTTCTGCTCTTAAGAGTGGAATTCAAGTTGTGACGTCTAT
CGTCAATTTATTTGTCCCTGGTACAACCAAAATCGCCAACCTCGTTTTAA
GTTCATACAGTTCAGTAAATTCTCTTTTCACTGGatccaaagttcgaaag
ccAGAAGCCCCGATTATTAAGGCTTTAGAAGATTTCAAAATTGAAGGCCT
ACAAGATGAAATAGCTGGTATTCAGTATCTGTGGGATATGATGACCAAAT
CTATTGCTCACTTTGAGGATTATTTGAACAATGACAAAATCATTACTGAG
CAGTTAGCAACTCAATTCTACTCCAATTCATTCCAAAGGATTGGAATTTT
CGGTCGATTAGACAAACAGATCaaaaaatattgtatcaaaaaacctcacc
aaggagattcgaatAAAAAGAACATCGATGTCTGTATGGCTTTACTTACT
TCTTACACAAgGTTGAGTGTTACCAGGAGTATCATGTTAGCGCGTTTAGC
AGGCATCACTCTAAAAGCTGAAGACCATTACAAAGAGCTGATAGACGATC
CTAAATATACCAGCTTGAAGGAAAAGATTGAACGTAAGATGCAAGATATG
GGTGGatataaagaaaatttcatcTATCTAGCTGATCAACAACGAAGCAT
GGACAAAGATGTGTTAAGaTTCTTAGGCGATCCATTAAATCAGTTTCAAT
CCAAGTTGGTAATTTTTGAACTGTTTTCCAACCCAGCAAAATACCAAGTG
TTGATGACATATCTTTTGAGTTTGGATGAACAGTATGAATTCTTGACCGA
CAAAGATCACGTGATATTGTGTCCGGAAAAGAAACTTTCGGGATTATGCA
GGACACTTTCTATTAGCGATGGGCAAGTCAAGAACAACCCAAGAGATTTT
CCAACGCAATCATGGTTTGTACCTATGGGACTTCAACTCTTCATGTATAA
GAAGGGCAAAGAGTTTGGACCTTTCATTGGCATGTTTGCATACTCACCGG
AGAACATGGATGGATTTGATTCCGTCAAAGCTACTAAGTTAGATACTGGA
AAGTATTTGGATGCAGCTGAAAACATTGTCATCTGTAATACTAACAAGAT
GTGTGATACCATCGATAGTAAGATCTACAAACAATACAATCTCAAGAATT
ACCATGGTGTCAATTATCAAAAGATAGCCAGCATTAAAGCTCCGGCAGGT
GTGAAAGTCTATCTTAGTGGTCAAGACAAAAATGTCGTCTGGAAAATTGA
TGGGCCATTATTTGGTCCATTCCAACAGACCAACATTGAGAAATGTTACA
GTGCCTGGACAACACTTACTGTCTATAAGCTTGAAGACGAAGAAGATGGT
CGAAAATATGTTGAGGTATGTGGTCCATCTGATGGATTCTGTTTGCAATT
CGAGCCTGGTAAAGTAGTTAAAACATCACCAGAAGGCTTCTTTGGAATGT
TGAATCCAGATGATACAGTCAAATGCCGACCAACTCCTGAAGGGGATACC
TTGAATGTGAATATACCGGTCGGTAGGTTGGTAACGGTCAAGAAAGGTGA
ATCATCATATGGCCCCTACCGTGGTCCAGCTTATTACCCAAATCTCAATG
TGGCGGATATGCAGATCCAAGTCGAAGATTTGTGGCAAGGTGATAAGCCA
AGTAAGAAGAAAGATGATAAAGATAAGGGCCGCAAAAGAAGCATGGCGGG
CCGTcgacatcatcatcatcataagcaTCGTCATGGAAGCAATGAGACGG
TCGTTGCTTTTGAAGATTCTTTAATGACACCCTAGTTAAAAAGTTGTCAC
TATCTCAATAGCCCTTATTTCGATTgtgaaaaattgttaaaatattttta
ataattttaatgtaaaaatcAATCTTATTTATTCTGT
Run BLAST on NCBI

protein sequence of TCONS_00066729-protein

>TCONS_00066729-protein ID=TCONS_00066729-protein|Name=TCONS_00066729-protein|organism=Clytia hemisphaerica|type=polypeptide|length=702bp
MASTVWLLVILTINLLSPTTLAESSTTTNGEEAAKEISNRVDEMKKANLI
FDPKLDNKLDEMKKSLKKVKPATDKGSEKPKGPDTMATAEAVNKALQGLP
GMVTALQTKDYTSALKSGIQVVTSIVNLFVPGTTKIANLVLSSYSSVNSL
FTGSKVRKPEAPIIKALEDFKIEGLQDEIAGIQYLWDMMTKSIAHFEDYL
NNDKIITEQLATQFYSNSFQRIGIFGRLDKQIKKYCIKKPHQGDSNKKNI
DVCMALLTSYTRLSVTRSIMLARLAGITLKAEDHYKELIDDPKYTSLKEK
IERKMQDMGGYKENFIYLADQQRSMDKDVLRFLGDPLNQFQSKLVIFELF
SNPAKYQVLMTYLLSLDEQYEFLTDKDHVILCPEKKLSGLCRTLSISDGQ
VKNNPRDFPTQSWFVPMGLQLFMYKKGKEFGPFIGMFAYSPENMDGFDSV
KATKLDTGKYLDAAENIVICNTNKMCDTIDSKIYKQYNLKNYHGVNYQKI
ASIKAPAGVKVYLSGQDKNVVWKIDGPLFGPFQQTNIEKCYSAWTTLTVY
KLEDEEDGRKYVEVCGPSDGFCLQFEPGKVVKTSPEGFFGMLNPDDTVKC
RPTPEGDTLNVNIPVGRLVTVKKGESSYGPYRGPAYYPNLNVADMQIQVE
DLWQGDKPSKKKDDKDKGRKRSMAGRRHHHHHKHRHGSNETVVAFEDSLM
TP
Run BLAST on NCBI

transcript from alignment at scaffold_459:46416..56446-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066729 ID=TCONS_00066729|Name=TCONS_00066729|organism=Clytia hemisphaerica|type=transcript|length=10031bp|location=Sequence derived from alignment at scaffold_459:46416..56446- (Clytia hemisphaerica)
GATATTTTATCAGGTCAGTAACCTTCACTGAACTCTCAAATCAAAATTTG
AGTGGGCATAGCTATTTCACGCTATGTCTATTGCAAGTGAACTTGGTTTG
TATCTTATATTTCAAAGTTAGGTGATCTAACAATTATCAATATTAGTAGA
ACCACTGCTTCATGGGTCCAAAGGTCGAATCATCAAAAATAGCCAATGCT
TTCGACCAAATGGATTCTACAGTAATCTTCACGATTTCTGCAGTTTAAAC
CATAAGATTCCATTTAAATACTCTTGTGTACAAACTTTACAATGTTTTAC
AAATATTCGGCATAGTTAGTGAATGTTTAACTATTGAAGCGCACAATTGT
GTGTTTTTCAATATTTGTTTGTTCCAAAGATGGTTTGTATATAATTTTAT
ATTAAGGTAACGATGGGTCAATCTTGCGGTCAGGCACTTTAATGTCAATA
CAGTGTGCCTCATTTGAGGGACGTCATTCGATCGGAACAAGTTTCGCTTC
TGCTTTTATTTTAAATTGGTTTTTCGACAATCGGGGAAAAATATGACTTC
ATATGACTCTTGTTGATTACATCTAGCGCGAGCCTTTTTAGTCCACATGA
TAGACAGCTCCAGGAAAAAACGAAAAAGACTTTATGACGTAACCTAGTTT
TGATTTGAATCTCTCATCTTCTTTAGAAAGCTGTAAAGTATGGCGTCCAC
AGTATGGCTATTGGTCATCTTGACCATCAATCTATTGTCACCAACGACGC
TGGCCGAATCTAGCACGACCACAAACGGCGAAGAAGCAGCCAAGGAGATC
AGTAATCGTGTCGACGAAATGAAGAAAGCCAATCTCATTTTCGATCCAAA
GCTTGACAACAAATTGGATGAAATGAAAAAATCTTTGAAGGTAAAAATGT
TCTTCGAGAAAAAAATATCGTAATGACATTTTGTGATACTACACGATCCT
ATTGAATTTTAGAATTATAGAATCTTGAAGATTTTGTTGCAATGTATCAT
ATAGAGTCTATTTTGGAAGAAAAGTTTCAAAGTTTTGAGGAGTTGTAAAG
TTTTAAATTCACCAATTTATAATTATCTTTCTAACGAGGAATCATATTAT
TTAGGATATTTCTGTTTTTCCTTCAAGATTAATGTTTTTTTTTGTTGTTT
TTTTTCAGAACAGCACAATTATACTGTAATACATTAATACAGTAAATTGA
TTTTCTATCACCCTCATATCTTAAGAGACCGTCTGGACAAAATGAACTAA
ACCCAGGTTCCACCTAATCACCTCCTTGGTTCCAACCCTAAACTCTGTTT
TTATTGTAGAAAGTGAAGCCAGCAACGGATAAAGGATCTGAAAAACCTAA
AGGACCGGATACCATGGCAACAGCTGAAGCTGTCAACAAAGCTCTCCAAG
GGTTACCAGGAATGGTAACTGCGTTGCAAACAAAAGATTACACTTCTGCT
CTTAAGAGTAAGTACACCTCTGTATCAAAGATCGGTTTGCCCCAATTGGA
TACAGGGAAGTTCAAGCATATTGTTTACAATACAGACCATAATGGCAGCG
AATGTCGAGGTCTTCCGCTCTAAAGTAGCAACGTTAGCAAAGATCGTCCA
TGAATTCTCCATCATCGATTAGACCATAGTATAAGAAAGCCGCGGCTGGA
ATGATAACATCTGAATTTCTCTTGTTCTATCTCTGTCGTATTTGATGACT
ATTTGTTGATCAAAAAGTCAGTAATGTAGCATCTTTAATGGTAAATTTTA
TTGGTTTGTCGTTAATACCTACTTCTTTAGGGCGTTTTAGACATTAATGA
TATGCCCTTGATAATACACTTGCATTATAAAATCATTGTAAAGGAAAGAT
CAACAATAAGAAATTTAAACAAGCACAAAATGGCTGGGCTGAAAGAACTC
AAAAATTAATAAATTGCCTCGAATGCCTTCGCAATATTTCAGTAAAATAT
TTTTAGAAATCAATGAAAAAGTACATCAAGATAATACTGTGAAAATTTCA
AGCCAGCACCTTCAAAATTCATCATTCAAATTGACAGGAAAGTTGTCATC
TTGAATATAGTTCTTATAATTTCAATTTTGGCGAAAAACTATTGTTTCCA
TAAAATACCCCTAAAATATGTCCAAAATTAGTTCAAGTGTTCTATTGGGT
ACAGATTGGAAGATATCTAGCAATAAAAAAACTTGTTTTGAAGGAAAATA
AGAGAAAAATTTCAAAAATTATCTACCAATAATAAACTGAGCATGTTGAT
GTTCTTATAAAGCTCGGAGACAGAGATAGAACAGCAATTAACTGAAAAGA
CAATGCGGTACATATTCCAGCCGCGGCTTTCTTATACTATGATTAGACCA
TGTTCAGACGTTATAGTTTGGTATCACTCTGGTGTGGTATTTGTTACGGA
TAGGAAAGGAAGTGTTCATGCTCATTTTGGAACATTTCGGAGTAAGAAAA
CGGAGCAGTTCCGTTCCGATGAAAATAGTGGAGCGAAATGGTTTTGATCT
GTTTTTCTTTTTAACATCTTCTTTTTTGACGTTTCCAATTTTGACGTTCA
CACAATATTTCGGAACCGTTTCATCTCGGAGCGAAACGGAACGTAGCGCG
TGAACGTGGTCTTATTTAGCCTATATAGAGGAGGTAAATATGCGACTAGT
TCAGTCGAAGGTGATCCAAAGACTCCCTCTTCTTTTGCTGTCAGCCTGGA
AGTAGGGGAGGGCCACTTCCTTCATTGGATTTCTCCACTTATCCTTGCGA
TCCGTCTCTTCTTCTCTTCTTTAATTGATGAACATTAAGCACAGAGAGAC
ATCAAATACCATTTGGGAGTCTTTGGTATGATCCAGCCTTGGATTGAACG
CGCAACTTTTCGCATCGTAGCTGGATGTTAAAAGAAGCTGTTTTAAAAGA
CTAGAATATGCTTTTTTTATCTACAGGTGGAATTCAAGTTGTGACGTCTA
TCGTCAATTTATTTGTCCCTGGTACAACCAAAATCGCCAACCTCGTTTTA
AGTTCATACAGTTCAGTAAATTCTCTTTTCACTGGATCCAAAGTTCGAAA
GCCAGAAGCCCCGATTATTAAGTAAGAATAAAACAATCTATGATAAGTTG
GCCTTAAACTCGCCCTGACAAAGTAAACATTTTCAAATCCGATTTATCTT
AGCTTTGGAAAAACTAAAAAGGTCTAGTTTTGGTTCGTTGGAAAGCTTTG
TTATCGAGATTTATCGTTGATAAAACTTCATGTTAAAGGTGTAAATGAAA
TAAGACATGGGTAAAGCATAGTATGAGAAAGCCGCGGCTTTCTTATACTA
TGGGTAAAGCTATCAAAAGGAAAAACTTTATCAACCAAAACCTGTCAATA
TTCAGTTTAAGCATGCCTTGCCAAAACAACATTAGCTTATTACACGCTTT
TTTTTTATAAGAATACACTTTATAAGAATGTCCATGATGAAAATGGCCGA
AAAACTAAGAATATGCTAAGAATATCACCATCATGGAATTTTGCTACTAA
AGTTAAGAATGCCATTTTAAGAGCATTTTCAATTATAAATTATCAATTAT
CCCCAAGTTAGGCTCACTCCTTTTACAAAAGTGCCATTTTATGCTCGAGA
CGTATGTACTAAATGTTAAATCTAGTATGAATTAAGATCCTAACCTAAGA
ATGTGCTGTAAGAATATTTTAAGATGATTTTCCCAAAAAAGTTAAGAGAA
TATCCATGATGAAATGGATTTACACCATTCTTATAAAAAAAAGCGTGTAT
TTCAATTGTAAAGTACCATTGACTTTTATTAGGCCTTTGTTGCTCCCTTT
TCGTCAACATGAAATAAACTATTACACATGTACCATACACGCTTTGTATA
TTCGTTTCAGGGCTTTAGAAGATTTCAAAATTGAAGGCCTACAAGATGAA
ATAGCTGGTATTCAGTATCTGTGGGATATGATGACCAAATCTATTGCTCA
CTTTGAGGATTATTTGAACAATGACAAAATCATTACTGAGCAGTTAGCAA
CTCAATTCTACTCCAATTCATTCCAAAGGGTGAGTATACAATTTTTTATG
ACATATCCCCTTCTCACAGACCCGCTTTTTCAGCCAATTAATATATTTCC
ATATTTTCTATGGCTATGATCTCAATTCTTTTGTTTTTAAGTAAGAAATT
TCAGTGAGGATGGGAAAATTAGCATAGTATTTTTGTAGTGAGGATTGGTT
TATTTGATTATTTTGGGATTATTTTCAGTGGGGACAAAAGTTGTAGGAAA
AATTTTCCATAGTGACGATATTTTGCTCAATTTTNGATTATTTTGGGATT
ATTTTCAGTGGGGACAAAAGTTGTAGGAAAAATTTTCCACATTGACGATA
TTTTGCTCAATTTTTCCAGTGGGAAGGGGTGCCAGTGGATCTGTGAGAAG
GAGTGTACTAAGGTCAACAAAATTTTCTTCATTTTCTTCACAACTTATTT
TCTTCCCGAGAGCTTTTTTCATCAGAAACAAACTTTTCTTCATAGGTGTT
TTCTATGGCTACCTATGTTAGGAGAAACTGGTGAAATTGAATTTCACTTC
CTCTATTTTGCAGATTGGAATTTTCGGTCGATTAGACAAACAGATCAAAA
AATATTGTATCAAAAAACCTCACCAAGGAGATTCGAATAAAAAGAACATC
GATGTCTGTATGGCTTTACTTACTTCTTACACAAGGTAAAACAACAACAA
AATTTATCAAATAAAAAGAACTACGGAGTACAACCGTTACTATCTTCTTC
TGTTTGAATAGCGTCTTCGTTTTCCTTGACGGTGTGTTACAGTGCTAGCC
CTTTTTTCNCCGTTACTACCTTCTTCTGTTTGAATAGCGTCTTCGTTTTC
CTTGACCGTGTTACAGTGTCGGTTTTTCGGTTTTTGAAAAAAAGAACGAC
GGCATTTTGGTGTCAGAAAAAAATACCATACTGGGAAGAAATAAGGATTC
TACCAATTTCTGATGTCGGTGTTGACGGTATTTCAATGTTGATGACATGA
CCTCCTCCTGCCTCACCTAGAAAACTAATCTTAAAGCTCTTTAAAAATCT
TACCAGAATTACCACGAAAATATTGACCCTATATCTATCGTTTAGTAAGA
GCTATGAATGAAAGGGTCGAAGGGAGGGAGTTGTTGGAAAGAATAATGTT
TAATCATAGAATATGTTAGCTTTTGGCTGACCTTTGCTATAAAAGCAAGC
AAGACATTGGTTTGAAAGTTGTAGAGCTCTAAAGTAGTGGGAAGTTTTGA
CTTTTTCGCATTTTTTCATCCATTCTTTCAACGATTCTTTTAGGTTGAGT
GTTACCAGGAGTATCATGTTAGCGCGTTTAGCAGGCATCACTCTAAAAGC
TGAAGACCATTACAAAGAGCTGATAGACGATCCTAAATATACCAGCTTGA
AGGAAAAGATTGAACGTAAGATGCAAGATATGGGTGGATATAAAGAAAAT
TTCATCTATCTAGCTGATCAACAACGAAGCATGGACAAAGATGTGTTAAG
GTAGAAAACCTCGTACAATGCTCAAACCAATACACCTATTCATCCTTAGT
ATCGCGTTCGGTTTTTAGCCGGAGACTGGTAGTGAATTTACAAGAAAAAT
TTGTGCTCGGCGCACGACATTTTTAGGCTATAAATCAAACTAAGAAAATT
CCTGCCAAAACTCTAAAGTATTGTTACCATCGAATATTTATATTGACGTT
ATATTATCGCTTCAATGCAAGGGTATCTTACATTTTTCACAAGAGCACTC
CTACACTTGTGTTTTCGATACCGTCGTCAAGGAAAGTTTTCCTTGTATTT
TCGTTACTAGTCTTCTCAAAAGCGTTAATGGTTAATACCCGGTTGATATT
ACGTGTTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCTGACGACTGGACGACAGATGAAGAATTAGA
CAATTTATAAATCTAAAATTATTTCGTAGAGGTCGATAGACCTGTGAAAT
ATAATTCTATGAATAAATAAAATGAGCTGTGAGGCGATCACTAAGAAAAT
TTCTATCCATTTCTCATTATTTTTCTGTTTTAGATTCTTAGGCGATCCAT
TAAATCAGTTTCAATCCAAGTTGGTAATTTTTGAACTGTTTTCCAACCCA
GCAAAATACCAAGTGTTGATGACATATCTTTTGAGTTTGGATGAACAGTA
TGAATTCTTGACCGACAAAGATCACGTGATATTGTGTCCGGAAAAGAAAC
TTTCGGGATTATGCAGGACACTTTCTATTGTGAGTATTTTGATAAAATCA
TGAAATTAGATGTCTTAAAACTCGAAAAATACTATGTACTATATAGATCT
AGTGGCCGACCCCCCCCCCTTAAGCGGCTTTCGAAGATGTGAAAGATTTA
GGCGTGATGCATCATTTGGAATATTTTTCGCTATCTTTGTAGGTATAGTA
AAAAAACTTGAGGGGTGCCTCATTTGCTTTAAGATGTTCTCTCTTATTCT
CCAAAATAAATAAAGGTACCAGATATTCCAAAGTCCTAGTTCACATTTTT
TTCTAAGAACAAACTGGACGGCGAAGATTTTAAGAACTAAGAACTTTTAA
AGGCTTTGTGGACTCGACAACACCCTTTTTCTTAGTAAAGTAGTCAAAAA
TATTTACAAAATGGTCAAAATAAGAAAGTTTTAAGAACATTTTGAGGCTT
AAAAAGTTAAGAACATCCGAAGGCTTAAAAAATTTTAGATGTTCTTATAA
AAAACGTGTAGCCCTCCATCCCAGGGACACTTACCCGCTTCATTGTTGGC
TCTTTTTTGTCATCNTAAAAAACGTGTAGCCCTCCATCCCAGAGACACTT
ACCCGCTTCATTATTTGCTCTTTTTTGTCATAGTTCTCCAAAAACATTCA
TTTTCTTTACAGAGCGATGGGCAAGTCAAGAACAACCCAAGAGATTTTCC
AACGCAATCATGGTTTGTACCTATGGGACTTCAACTCTTCATGTATAAGA
AGGGCAAAGAGTTTGGACCTTTCATTGGCATGTTTGCATACTCACCGGAG
AACATGGATGGATTTGATTCCGTCAAAGCTACTAAGTTAGATACTGGAAA
GTATTTGGATGCAGCTGAAAACATTGTCATCTGTAATAGTAAGTTTGTAA
TCATGCAAATTAACAAAAATAAATTTTCTCTGCTGATTCCTTTATCTTTG
TTTAATTTTCGTGGAGATTTTTGTTAAGCTTTGAGTTTTGCGAGTTTTTT
GGCCAAAAAAATCCTGAAATACACGGGGACGAGATTAGGACAAACTCTCT
AGTTTGCGTTACTTTTTAGTGCTACTACAATTGCTTTCATGGGAACAATA
ATGAAAAAAGTAAGCTAAGGGGACTTGGTAAGAGTTGTAAGCTACTAAAA
AAACTTTGTCGTTCGGATCATGCTTTTGATAAGAAATAACAGGCCTGAGA
AAAGCCTGTGCTTGCTCCACATTCATCAAAAACTCGTCACCCATGGATTT
TTTAAACGTTTTTGTGTTTAAATTTTATGATATTTTGTTATTAACCCATG
ACAGATTTTTTAGCTTTTTTTAGCTGAAGCGAAAATCAGGTCAGCAATCT
CACTCACTTGTGAATTTTTGTGTTTGTTTTTCAGCTAACAAGATGTGTGA
TACCATCGATAGTAAGATCTACAAACAATACAATCTCAAGAATTACCATG
GTGTCAATTATCAAAAGATAGCCAGCATTAAAGCTCCGGCAGGTGTGAAA
GTCTATCTTAGTGGTCAAGACAAAAATGTCGTCTGGAAAATTGATGGGCC
ATTATTTGGTCCATTCCAACAGACCAACATTGAGAAATGTTACAGTGCCT
GGACAACACTTACTGTCTATAAGCTTGAAGACGAAGAAGATGGTCGAAAA
TATGTTGAGGTATGTGGTCCATCTGATGGATTCTGTTTGCAATTCGAGCC
TGGTAAAGTAGTTAAAACATCACCAGAAGGCTTCTTTGGAATGTTGAATC
CAGATGATACAGTCAAATGCCGACCAACTCCTGAAGGGGATACCTTGAAT
GTGAATATACCGGTCGGTAGGTTGGTAACGGTCAAGAAAGGTGAATCATC
ATATGGCCCCTACCGTGGTCCAGCTTATTACCCAAATCTCAATGTGGCGG
ATATGCAGATCCAAGTCGAAGATTTGTGGCAAGGTGATAAGCCAAGTAAG
AAGAAAGATGATAAAGATAAGGGCCGCAAAAGAAGCATGGCGGGCCGTCG
ACATCATCATCATCATAAGCATCGTCATGGAAGCAATGAGACGGTCGTTG
CTTTTGAAGATTCTTTAATGACACCCTAGTTAAAAAGTTGTCACTATCTC
AATAGCCCTTATTTCGATTGTGAAAAATTGTTAAAATATTTTTAATAATT
TTAATGTAAAAATCAATCTTATTTATTCTGT

Coding sequence (CDS) from alignment at scaffold_459:46416..56446-

>TCONS_00066729 ID=TCONS_00066729|Name=TCONS_00066729|organism=Clytia hemisphaerica|type=CDS|length=2109bp|location=Sequence derived from alignment at scaffold_459:46416..56446- (Clytia hemisphaerica)
ATGGCGTCCACAGTATGGCTATTGGTCATCTTGACCATCAATCTATTGTC
ACCAACGACGCTGGCCGAATCTAGCACGACCACAAACGGCGAAGAAGCAG
CCAAGGAGATCAGTAATCGTGTCGACGAAATGAAGAAAGCCAATCTCATT
TTCGATCCAAAGCTTGACAACAAATTGGATGAAATGAAAAAATCTTTGAA
GAAAGTGAAGCCAGCAACGGATAAAGGATCTGAAAAACCTAAAGGACCGG
ATACCATGGCAACAGCTGAAGCTGTCAACAAAGCTCTCCAAGGGTTACCA
GGAATGGTAACTGCGTTGCAAACAAAAGATTACACTTCTGCTCTTAAGAG
TGGAATTCAAGTTGTGACGTCTATCGTCAATTTATTTGTCCCTGGTACAA
CCAAAATCGCCAACCTCGTTTTAAGTTCATACAGTTCAGTAAATTCTCTT
TTCACTGGATCCAAAGTTCGAAAGCCAGAAGCCCCGATTATTAAGGCTTT
AGAAGATTTCAAAATTGAAGGCCTACAAGATGAAATAGCTGGTATTCAGT
ATCTGTGGGATATGATGACCAAATCTATTGCTCACTTTGAGGATTATTTG
AACAATGACAAAATCATTACTGAGCAGTTAGCAACTCAATTCTACTCCAA
TTCATTCCAAAGGATTGGAATTTTCGGTCGATTAGACAAACAGATCAAAA
AATATTGTATCAAAAAACCTCACCAAGGAGATTCGAATAAAAAGAACATC
GATGTCTGTATGGCTTTACTTACTTCTTACACAAGGTTGAGTGTTACCAG
GAGTATCATGTTAGCGCGTTTAGCAGGCATCACTCTAAAAGCTGAAGACC
ATTACAAAGAGCTGATAGACGATCCTAAATATACCAGCTTGAAGGAAAAG
ATTGAACGTAAGATGCAAGATATGGGTGGATATAAAGAAAATTTCATCTA
TCTAGCTGATCAACAACGAAGCATGGACAAAGATGTGTTAAGATTCTTAG
GCGATCCATTAAATCAGTTTCAATCCAAGTTGGTAATTTTTGAACTGTTT
TCCAACCCAGCAAAATACCAAGTGTTGATGACATATCTTTTGAGTTTGGA
TGAACAGTATGAATTCTTGACCGACAAAGATCACGTGATATTGTGTCCGG
AAAAGAAACTTTCGGGATTATGCAGGACACTTTCTATTAGCGATGGGCAA
GTCAAGAACAACCCAAGAGATTTTCCAACGCAATCATGGTTTGTACCTAT
GGGACTTCAACTCTTCATGTATAAGAAGGGCAAAGAGTTTGGACCTTTCA
TTGGCATGTTTGCATACTCACCGGAGAACATGGATGGATTTGATTCCGTC
AAAGCTACTAAGTTAGATACTGGAAAGTATTTGGATGCAGCTGAAAACAT
TGTCATCTGTAATACTAACAAGATGTGTGATACCATCGATAGTAAGATCT
ACAAACAATACAATCTCAAGAATTACCATGGTGTCAATTATCAAAAGATA
GCCAGCATTAAAGCTCCGGCAGGTGTGAAAGTCTATCTTAGTGGTCAAGA
CAAAAATGTCGTCTGGAAAATTGATGGGCCATTATTTGGTCCATTCCAAC
AGACCAACATTGAGAAATGTTACAGTGCCTGGACAACACTTACTGTCTAT
AAGCTTGAAGACGAAGAAGATGGTCGAAAATATGTTGAGGTATGTGGTCC
ATCTGATGGATTCTGTTTGCAATTCGAGCCTGGTAAAGTAGTTAAAACAT
CACCAGAAGGCTTCTTTGGAATGTTGAATCCAGATGATACAGTCAAATGC
CGACCAACTCCTGAAGGGGATACCTTGAATGTGAATATACCGGTCGGTAG
GTTGGTAACGGTCAAGAAAGGTGAATCATCATATGGCCCCTACCGTGGTC
CAGCTTATTACCCAAATCTCAATGTGGCGGATATGCAGATCCAAGTCGAA
GATTTGTGGCAAGGTGATAAGCCAAGTAAGAAGAAAGATGATAAAGATAA
GGGCCGCAAAAGAAGCATGGCGGGCCGTCGACATCATCATCATCATAAGC
ATCGTCATGGAAGCAATGAGACGGTCGTTGCTTTTGAAGATTCTTTAATG
ACACCCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041730XLOC_041730Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066729-exon-scaffold_459-1575043694:56434..56446TCONS_00066729-exon-scaffold_459-1575043694:56434..56446Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:55557..55770TCONS_00066729-exon-scaffold_459-1575043694:55557..55770Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:54990..55137TCONS_00066729-exon-scaffold_459-1575043694:54990..55137Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:53376..53520TCONS_00066729-exon-scaffold_459-1575043694:53376..53520Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:52418..52586TCONS_00066729-exon-scaffold_459-1575043694:52418..52586Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:51762..51883TCONS_00066729-exon-scaffold_459-1575043694:51762..51883Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:50947..51153TCONS_00066729-exon-scaffold_459-1575043694:50947..51153Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:48568..48763TCONS_00066729-exon-scaffold_459-1575043694:48568..48763Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:47709..47934TCONS_00066729-exon-scaffold_459-1575043694:47709..47934Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1575043694:46416..47212TCONS_00066729-exon-scaffold_459-1575043694:46416..47212Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:56434..56446TCONS_00066729-exon-scaffold_459-1510915933:56434..56446Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:55557..55770TCONS_00066729-exon-scaffold_459-1510915933:55557..55770Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:54990..55137TCONS_00066729-exon-scaffold_459-1510915933:54990..55137Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:53376..53520TCONS_00066729-exon-scaffold_459-1510915933:53376..53520Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:52418..52586TCONS_00066729-exon-scaffold_459-1510915933:52418..52586Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:51762..51883TCONS_00066729-exon-scaffold_459-1510915933:51762..51883Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:50947..51153TCONS_00066729-exon-scaffold_459-1510915933:50947..51153Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:48568..48763TCONS_00066729-exon-scaffold_459-1510915933:48568..48763Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:47709..47934TCONS_00066729-exon-scaffold_459-1510915933:47709..47934Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1510915933:46416..47212TCONS_00066729-exon-scaffold_459-1510915933:46416..47212Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:56434..56446TCONS_00066729-exon-scaffold_459-1491911889:56434..56446Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:55557..55770TCONS_00066729-exon-scaffold_459-1491911889:55557..55770Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:54990..55137TCONS_00066729-exon-scaffold_459-1491911889:54990..55137Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:53376..53520TCONS_00066729-exon-scaffold_459-1491911889:53376..53520Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:52418..52586TCONS_00066729-exon-scaffold_459-1491911889:52418..52586Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:51762..51883TCONS_00066729-exon-scaffold_459-1491911889:51762..51883Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:50947..51153TCONS_00066729-exon-scaffold_459-1491911889:50947..51153Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:48568..48763TCONS_00066729-exon-scaffold_459-1491911889:48568..48763Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:47709..47934TCONS_00066729-exon-scaffold_459-1491911889:47709..47934Clytia hemisphaericaexon
TCONS_00066729-exon-scaffold_459-1491911889:46416..47212TCONS_00066729-exon-scaffold_459-1491911889:46416..47212Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066729-proteinTCONS_00066729-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_459supercontigscaffold_459:46416..56446 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17494	0.27295	0.316921	0.0581358	0.235916	0.335563	0.202421	0.168448	0.958218	0.657364	4.94492	11.1499	33.4264	20.2507	4.09266	5.1596	1.12941	1.0903	1.78526	1.34273	0.524339	0.742512	0.481397	0.310009	0	0	0.359815	0.307204	0.368922	0.217611
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066729 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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