TCONS_00066769 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00066769
Unique Name	TCONS_00066769
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2190

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_46:335720..352464+
coding sequence from alignment at scaffold_46:335720..352464+

transcript sequence

>TCONS_00066769 ID=TCONS_00066769|Name=TCONS_00066769|organism=Clytia hemisphaerica|type=transcript|length=2190bp
CAGTAAATCGCAAAGGATCGGGAACAATTTGTAATGTTATGAGTTTTTTC
AACATGGCCGCCCGTTGAGgatgttttgaaattaattttagttTGAGGTG
GCTAACATTATGCGTTGCACATTTATTTTGAATGAAAGCAAAATTGAGCT
AGTAGTAAAAAAATGATCTTTATTTATGAGTGCATttgataaaaagacaa
aatggtTGCATTAGAATGGCAAATGGCCATCAATTGGGTCCGCTCTACAG
ACATTGAACCTGCAAAAAAACAAGCTCTCAACAAAATAGACGACCTTCTG
GAATTTGCTCAATCCTTACGTGATGGCTATATTTTGTGTCTTGTTGCTAA
CTCTCTGAGGCCAGGAACTATAAAGGATATATCAAAAATTAACAATGTTA
ACATGCATGagTTCTTATGCAACCGGAATATCAGGGCTTTTTTGAAAGCA
TGTACAACTGTTTTCAAGCTTGATGACAAAAAGCTTTTCAAAGCAAAGGA
ACTTTATGAGGCTACAAATTTTGAAGCTGTTATCAAAACATTGTCTCATT
TGTCAAAAACCTCGATAGCAAAAGGAGCAGGCCTAAAACCATTTCCTCCA
GACGATTATAAGAAACAAAATCACCAGGAGCAAGAAGAAGACATCTATGG
CTCCCTCGGTGAAATATTAGAGGagagagaagaaaaaacagaTTATTACA
ATTATGATGAACAAGAAGAGGATATATATGATCATGTGGAAGTATCTGAA
AAGATCTACGATGATATTGTCCAATGCACACGACAGGCACATGCAGCTAC
AAAGCCAGCAGCATCAGATAAGCGTTCACATATCGTAAACGAGATTATTG
AAACTGAAGATACTTATGTAAACCATTTGAAAGTCATGGTGGAGcAATAT
ATAAAGCCACTGAAAGCTCACATGTCTTCTCAAGACAAAGAAACTATTTT
TATCAACACAGAGcCCCTTTATTTATTTCACATGACGTTTAAAAGAGAAT
TATCAACTAGGAGAACAAGTACCAATGTCAAACTAAATCTCAATGCATTT
GATAAATATaAAGATAAATTTCTAATATATGCAACATATTGCACAGGATT
AGAAGAAGCACAACAACATACCATAGAATTATCAAAAGAATCTGGGTTCA
GGGACAAAGTTGAGcAATGCAACAAAACAGCAAAACGAAAGTTTCCTTTA
CAAGAACAGTTAATGATTCCGTTCCAAAGAATATTGAAATATCCTTTATT
ACTGAGGGATCTGAACAAACACACACCTGAGACTCATGAAGATAAAAAGG
CTGTTGAACAGGCTTATGACCTTATGGATGATGTGGCCAGATACATTAAT
GAATACAAAAGAGATGCAGAAGCAGTTAAAGTGCTGGCGCAAATCGAAGG
AAGtATAAAATATGAAATGCAAGCTCAGGGGAGTAAAGGCGGGCAATATG
GACGCTACGTTAAATGTGGAGAAATTCAAGTCAAATTTGACTCCCAAGAA
AAGAAAGTAATAAAACGGTTTGCCTTCTTGTTTCAAAAGTCTATTTTACT
GTGCAAACAGAGAGGGGACTATTATGACGTCAAAGAAATATTTGATATGC
AGAAATTTAAAATTGCTGACGTACCTCCAGTTGGAAAGGGCAAGTTCAGT
CAAGGTTGGTCCATGCAGGCACATGCTCCCGATGGTGTAACAGAACATAA
AAATTGCACCATGTTTGCGAAAACACAGCAGGAGAAAATCAATTGGGTTT
CCGAAATTTCTAAATGCATAGAGGCGGTAACTTTATCACAATACGAAGGG
AAGTTGGACAAGCATCAATTTGAACTTACAACCTTCGAAAAACCACAATG
TTGTACTGTTTGTAACAAATTACTAAGGGGTCAAGTCAGTCAAGGCTATA
AGTGTAGCAACATTGaatgTGGAGCTATCGTACACAAAGACTGTTTGGTA
AAATGTCCGAGATGTAAGATCGCACCAAGTCGTCCTCTAAACCCTAAACC
TACCAGTGGGCGAAGCATGAAATCTTATGAGTGGAGTACAACAAGCATTC
CAAACGCTCACAAGTCACCACCAGCCCAACAAGTTTCACAAATGCAGATC
AGCGACTCCTTCTCTAAATACCACTGGTaagataattgtttttatttgtg
CAGAAGTAAGTGCTGTTATTTTTTACaaggacaatttttt

Run BLAST on NCBI

protein sequence of TCONS_00066769-protein

>TCONS_00066769-protein ID=TCONS_00066769-protein|Name=TCONS_00066769-protein|organism=Clytia hemisphaerica|type=polypeptide|length=642bp
MVALEWQMAINWVRSTDIEPAKKQALNKIDDLLEFAQSLRDGYILCLVAN
SLRPGTIKDISKINNVNMHEFLCNRNIRAFLKACTTVFKLDDKKLFKAKE
LYEATNFEAVIKTLSHLSKTSIAKGAGLKPFPPDDYKKQNHQEQEEDIYG
SLGEILEEREEKTDYYNYDEQEEDIYDHVEVSEKIYDDIVQCTRQAHAAT
KPAASDKRSHIVNEIIETEDTYVNHLKVMVEQYIKPLKAHMSSQDKETIF
INTEPLYLFHMTFKRELSTRRTSTNVKLNLNAFDKYKDKFLIYATYCTGL
EEAQQHTIELSKESGFRDKVEQCNKTAKRKFPLQEQLMIPFQRILKYPLL
LRDLNKHTPETHEDKKAVEQAYDLMDDVARYINEYKRDAEAVKVLAQIEG
SIKYEMQAQGSKGGQYGRYVKCGEIQVKFDSQEKKVIKRFAFLFQKSILL
CKQRGDYYDVKEIFDMQKFKIADVPPVGKGKFSQGWSMQAHAPDGVTEHK
NCTMFAKTQQEKINWVSEISKCIEAVTLSQYEGKLDKHQFELTTFEKPQC
CTVCNKLLRGQVSQGYKCSNIECGAIVHKDCLVKCPRCKIAPSRPLNPKP
TSGRSMKSYEWSTTSIPNAHKSPPAQQVSQMQISDSFSKYHW

Run BLAST on NCBI

transcript from alignment at scaffold_46:335720..352464+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00066769 ID=TCONS_00066769|Name=TCONS_00066769|organism=Clytia hemisphaerica|type=transcript|length=16745bp|location=Sequence derived from alignment at scaffold_46:335720..352464+ (Clytia hemisphaerica)
CAGTAAATCGCAAAGGATCGGGAACAATTTGTAATGTTATGAGTTTTTTC
AACATGGCCGCCCGTTGAGgatgttttgaaattaattttagttTGAGGTG
GCTAACATTATGCGTTGCACATTTATTTTGAATGAAAGCAAAATTGAGCT
AGTAGTAAAAAAATGATCTTTATTTATGAGTGCATttgataaaaagacaa
aatggtTGCATTAGAATGGCAAATGGCCATCAATTGGGTCCGCTCTACAG
ACATTGAACCTGCAAAAAAACAAGCTCTCAACAAAATAGACGACCTTCTG
GAATTTGCTCAATCCTTACGTGATGGCTATATTTTGTGTCTTGTTGCTAA
CTCTCTGAGGCCAGGAACTATAAAGGATATATCAAAAATTAACAATGTTA
ACATGCATGaggtaaaaatgttttttttacataTAAAAAGGtagttaaag
gttttttttacatATGATAGTCCATTACGCATTATAGAGTATAtgttatt
atattttataatattCTAGCCGGTACTTGGCGTTGCACGGCAGTTTAGct
gttgctgaacgcatttaaagtcctttggatgttgggaaggtggcttaaat
tagatttgatttgaaattagatttttaatttgtggcaaaaatgatcagaa
agggTATCATTTAAATAACACTTATACTGGTGACCAGCAACGTCtaagac
ggctctgcaattagatatttttctcgcttcgaTTGCTTTAGAGGGGGGTC
CCCAGTGCACGAACgccaaacttatttttcacttttttcacttactttta
gtttttacataaatccttttcGACCATCTTGTAGCCTTGTAGACAAGgtt
gaagtccttctttcagtttgttttcactttatttgaagccttcagggctc
gaaataacggtcggacatcggacattgtccgacccaattgttgaaatgtc
cgacccaaatcgattctagtcggacatcatgtccgacccaattactttcg
gtgccttcaaaaaatttgtcagatgcgttgtgaaatttccaaaagaaatt
ataatttacataaaattagtaacttctttatttatatacacacaaaaact
ctcaaagttgCGATCATTAGTGTTCTTAGATATTAATTTTGTGTGatgct
ttttctcaacaaatgaaagcatgcttcaagtaaaaatcatgggcttctga
ccattaattggcatttgtttagcttcttcgtNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNcccattttactttaaaagcctt
aggacatgtccgacccaaatcaatttttgatcggacaatgtgtccgacca
cctaaatatcgttatttcgagccctgagCCTTCTTCTTGAAATAATAAGT
GGTTAAAGCGAGCGCTATTCGGACCTGCAGTCCACGAACGAGGAACCAGT
GCACTAAcgatcttttaaaagaaaaaattagagctccgctcgcaggtaat
actttaaaggggaattaacgtttcaaaattgttaacaaataaattacaga
ttcaaatagagctcattgagacaatttcaaatatatatggttTATAGGGC
TTTAATCTTCTACATCCGGGATAAGAGTTGTTTGAAAATTCCCTTGCGTT
GCTATGGATACGAAAAATGTGACGTAGCACACGCtctgtgtttctctttt
ttataagggaagagtggtgaatgatgatttaaaatgcagtttttgagttt
ctttttacCGTTAGAAAGTTCACTGCACATTTGGAATACTAACTAGACTC
TCCTAGTATTATTTCTTCAACGTTTTGCTACAACtactctaaaaaagatt
aatttcttatgttttttatctcttttacaACCAAATAGAGTGTAACAGTA
AGAATAGTTGGGGCGcatgtgacgtcacaaaatcaACAGACGGGGAGTTT
TTCTCCATTGTAGAGTCAAAATTGTGAGAAATTAAAGATTGAATAACTca
atgaataaaagacattatgaagtggttctttttttgttcgatcacatttt
tcttcctctttaatgtttcgaaaaaaaatctcagggttaattccaaacgt
taattcccctttaacTCTCTTCCaagatgatacaggggtatttgaacttt
tcgaAACCACGcgctttttcaccaaaaaagcgtctttattataagaactt
tagcgttttactaacctgtttatttttgtaaatattttcttgtcgtccat
ttttttgttttctttttcaagttttgctcatcgaaaagcgcgacaatgta
gtgtcttcttttttaattgagatcgccagcgctttcgaatgttttgacgt
tgaaatgtcttcattttgaatatggtgttcGGATCGTTCGCAGACTggaa
ccttttttatatcaactaccgtgagtggtcctaaatccgacagccctgcc
taaatccaacgtggtctttcaaagatacaaactaaaataaaaaaaccctt
ttgctgtgacgcaacgaaaatACCataagtgtcaactaaactgggaAATT
TGATGCAGTAAACCAGTTAAGAACCAAATAATTAACAATATTTGCTTCTT
ATacgaaacatatttttttttgcaatatatATGTCAAACATCATAAATGa
taataaaaggtaattacatTCAgacttttacaactcacactttttaatta
cattattgacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAACTTGGAGAAggagtgtttgtaaacatagaattttttttcat
aacctttatttggggggtcggaattaggcagggctgtcggatttaggacc
actcacggtactggtgatatgtttctattgattttgaattaatataatga
gctaacatgtttcaatgaaattttgtgtgatggaagataacaggttttta
aaagaggaaagtcattttcagaactcttcttgcgcaaattttcttataaa
aaacattttctcttgcgatcagccatgtttacaaaaatcccgaATTTCGT
GATTTTATTACTTGGCCTCGTTCAAATCAGTTTGGTGTTGTTCTGTAGTG
CtccgtttattttaatttttggagagattgcaaGGGATAGTTTTaggatt
ctgctgcacaaaggaagttctatagaagtttgtttttggttgtttttttc
aagttcaaagacgcttgttcgtgcactggggccgttcgtgcactgggacC
GTTCATGCACTGGGGCCGTTCATGCACTGGTGACATGACTCtacatttgc
cgtagttcttgatgatATTAGGAGGGGGGTTTCAGTGGGTACctgattcc
gcaattccgccaattttttctccaatttccgtcaaaccgtcttaaattga
accaaaattccgtcaccgaaaattcctttgaatttCAATATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCGcaaatttggaatatct
tttaccaattccgaaattccgcaattttttttgctaaattccgtttttcc
gcactaaaattgtctaattttccatCTCCGTCATAGAACCCAAtctccgt
aattccgtctaaattttcgccaaattccgccactccgtccgaaaaaagag
ccgattccgctcctccgccaaacgtgaaaccccccccttaggaaaacttt
gataaCAAGATTTGTTGAAAAAAGGCAGCCAGGGGTACTTTTGTTCCatc
cttaagggtgccttttttgaaacatggcagtccCTGTAAGGGGAAAACTT
CTGAAGGGATTTGTGAAAAAATAAACAGGCGCCTTATaatgaaattaata
ttttcaaaaactacgAGAAAATTTAacccaagccaaccttgaaaactaat
ttgaagaacaacttACAGTACCTAGATCTGTGCACCATCAAAAGTATATT
CCCTGGAAATTTgctggacctcaaacactgagatctttattaaagaaaaa
tggaaacTGTAAAATTCTCTCAGGAAATGTTGAATTTGTAAATTAACAGT
AAGGATGCTCATCCCTTTAAAagaacaataatttttttagtgGCAGTTAG
GGGCATTCTTCATTGTTGAGGGACCTCTGAAAGTTTATCTACGTGAATTG
AATGCTAAAAAGATGAGGATTTTATGTCTTATTATGGTCCTATGTAGACA
TCCCAtataattctgacaccctttttaGAGATAGGGTCATTTTTATGTAA
ATGTTTGAACAGTGTCGCTTAAGCTGAAAAATTATAATATGTTGGTTAGG
CAGTAGTTTGGGTCATAGAATGTCTGATGTCCAACAGTAGTAGTTTTAAG
ACTTGAAAAAAGGTTAGATATGCCCTATCCAATTAGTCTTAGAGTTCACA
AAATTTATGTTATTAAATATTATGTTAAGTTGATGATTACATCTTTAAAA
TACctctttttgatgattttcgtATCTGTGGTTTCAGCTATACTTGTAAT
TTTGTTAGGTTTAACTGTTATCGatcatattttgaatatttttctttacc
ttGATCATTTTCAGTTCTTATGCAACCGGAATATCAGGGCTTTTTTGAAA
GCATGTACAACTGTTTTCAAGCTTGATGACAAAAAGCTTTTCAAAGCAAA
GGAACTTTATGAGGCTACAAATTTTGAAGCTGTAAGAATATTACTTTATA
TGAATTTATGacattttaaaccttttttaattcaatgcTTTTTGGCATTT
TATCATTTAAGAATAATATTATAGTTGTGTGGTCATTACACTTAAAATTG
TGACGTAATCTTCCCAAATTAGATGAATTACATACAGTTTGCATGATTTA
ATTTTTAACCACAACAAAAGGATTATTTGGTTACATGATTAAAAACTAAC
AAAGGCAATAGACAATAAAAAGTTACAATAATAGGCTTCTAGACcagtgt
ttttgaaaaaatgaaaaattaaactgtTACAAGATGttgtaaaatgtttt
tatcacTATTAGTATTAGAGAATTCTGTTTCATTTTTGCTCTACTCCTTT
TAGGTTATCAAAACATTGTCTCATTTGTCAAAAACCTCGATAGCAAAAGG
AGCAGGCCTAAAGTAAGTATTAGTAAAGTAATTAGTAAAGCTGaattttg
ccttatttttcCCAGTTTCTCATTGACATTGAAGGAGAAAAATCCAAGAA
TTTCTCCAGCTGCTATTTTAATCTACTTTTAACCaatcataattttattt
acctttcccAAGCCtcaaaataacaatttcaagtgggtcggtcaaaatgt
ccgatcagggttgctttagcttgaaaattatgatttttaggTCGGAAatg
aagctatttgggtcggacTATGTCCAATGTCTGATCGTTATTTCGAGGCC
TGCTTTCCTACTACTGTACAGGAAAACAGTGATAACCAAAGTGAAGTGAT
AAACCTCCCATACAAGACAGATTTTGCCANCTGTACAGGAAAACAGTGAT
AACCAAAGTGAAGTGATAAACCTCCCATACAAGACAGATTTTTTCTGACG
CTGTGTTTTGATGTACTTTAACTGTATTTTACAAATCTAGACCATTTCCT
CCAGACGATTATAAGAAACAAAATCACCAGGAGCAAGAAGAAGACATCTA
TGGCTCCCTCGGTGAAATATTGTAAGTTTTAAAAATAGTATtgaatacct
tattacacaaatgTAAGAAGGCAAGTTTTTGATATTGACACTACAAGATA
TTATCTTTGCTCTAAAAAAGTTTGTTGAAGTTTGGATTCATTCCTATCAT
TGCGTgttatatcagcataatttatTTCATTGATGAAAATGAGTTTCtgg
aaattcaaaatatcacttTTTAGAGAGGagagagaagaaaaaacagaTTA
TTACAATTATGATGAACAAGAAGAGGATATATATGATCATGTGGAAGTAT
CTGAAAAGATCTACGATGATATTGTCCAATGCACACGACAGGTAAACAAA
AACTATTGAAGTGATCCAGTTTCTTCATTATTATGAATACTAATTTGTTG
GATCCAGTGTTCAAAGTTTTTCCGTCTTGGGCAGATTTCCGTCTCAGCGA
GGTGCCAAAAGAGGCTTTTCTGtctccaaattcaacaaagtcCATTTCCG
TCATTcaacaaaaatcttcaaatcatGAAGAATCTGGCCAGATTTGTTGT
TAAAAGTCCATTTTCTGTCTGTGATGAAAACTTTACTTTGACCACTGCCA
ATCATAATATGAAAAGCTTTCCTAATGAATCTCtattttatgacaaaaaa
ttatCTTATTCCTACTAGGCACATGCAGCTACAAAGCCAGCAGCATCAGA
TAAGCGTTCACATATCGTAAACGAGATTATTGAAACTGAAGATACTTATG
TAAACCATTTGAAAGTCATGGTGGAGGTAAGTTAAAATGGCAATTGAATA
ATTCAATTGCATTCTAAGGCTTTCTCCATAGTAAGTTCTGGCATCTCTGC
CCCAAGTTTCCTTTATAATAAGTTAAAATTTGAATTGGAATATAATTGTT
AGGCTgatatcaaatatttcaatcatTCATTTTTTGAATCTAATGTGATt
attattggacctaccccggtggggNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtttttggcattttctcgagatttcatcattagttttttcaga
ttttttgcacaaagatgcgtattagcaatgcctaaaacatggcagagtcc
gatttttgagagaaattcttttccggccgaaaatgccggaattatgccgg
aaatcgccgttttgcagattttcatcggactttttccttNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaatatgccggaaa
tcgccgtttttgcagattttcatcggactttttccttatatttcgttgtt
ttttcacacaaaaacattattaatagcaatgaccacgatcaagcatggtt
caattgtcgataaaactgatttttgaagccggaactttctaaaaatcgcc
agaacagccgattttctccggaaaaacggtatttcttgaatttctcgagc
tgtactttatatctttttatgaaattttgcacactaatgtaaaatgacaa
tacctaaaaagttacggagcccgattttcgaaaaacatttttttccggcc
gaaagtgccggaaatatgccggaaaaactggttttctggcattttctcga
gattttatcattagttttttctgattttttgctctaagatgcgtattaat
attgcccaaaacatggctgagttcgatttttgagaaatttttttttccgg
tggaaaatgccggaaatatgccggaaaaactggttttctggcattttctc
gagattttatcattagttttttctgattttttgctctaagatgcgtatta
atattgcccaaaacatggctgagttcgctttttgagaaatttttttttcc
ggtggaaaatgccggaaatcgccgtttttgcagattttcattagattttt
tccttgtatttctatgtttttgacacaaaaacattattgataacaatgcc
accatcaagcatgattcaattgtcaataaaactgattttcNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaa
cgctatgttttctgactgattttttttcatttttctccttgcattgctat
ctaactttcatcatcaggtaggtccattcagcatctagcttgtttttaaT
CTTTACTGATTTGCgaattcttcttcttttttagcAATATATAAAGCCAC
TGAAAGCTCACATGTCTTCTCAAGACAAAGAAACTATTTTTATCAACACA
GAGGTAAGTAGGAATAGAAATGAGCTTTATTAAGATAATTCATGAAATTA
CTTTCTACAGTATCTATTCTATCTAATGATTGACTAGtttttaggtattt
tttgcAAGTTTCTTTGCTACGTTTCGAATAccttctttgttttcaatttt
agcCCCTTTATTTATTTCACATGACGTTTAAAAGAGAATTATCAACTAGG
AGAACAAGTACCAATGTCAAACTAAATCTCAATGCATTTGATAAATATGT
AAGTTCTATTAAAGCCAATATGCAGTTGAAACTCTTCAACCTGAACCTCT
ATAACATGAATGTCTCTTTAAATTGAACAAGTTTTGTGGTCTCTTAAATT
AACAATACCtttttataaaccttactccataactggAGAATGTGCTCCCT
ATGGAGACTCTGTATTATTTTCAACACTAGCGACTTTGTACACAGAATGA
AATCTTTATATGTTTTCAATGTAATGAAATGATTGTTCTTCCATCTTTGT
ACATCACCATTTTAGAATATTTTGGCGCAACAACTTTTTAAATTATATAT
AATGAACTTTAATTTAATTTCTAACTTgctatttttcctgtttttagaAA
GATAAATTTCTAATATATGCAACATATTGCACAGGATTAGAAGAAGCACA
ACAACATGTAAGTTTAGCTTGGCTTTCCAAAagtaaacattttttcaaat
acaTTTCTTTAATGTGAGAAAAGGATCATCTAGATAATTATACTCAAGAA
ATAAGCGATGGATTTTTCTGCAGAGTCGCCCAACATCCATCTTTTAATCT
ATTCATGCAAGTTTTCCTATCATTTTTTAGACCATAGAATTATCAAAAGA
ATCTGGGTTCAGGGACAAAGTTGAGGtaagatttgaatttttaaactaAA
GGTATATAATTTCCTACCAATTTCAATGATTGTATTAGATTTTTCCAACA
TTTCTGGATCTAGTTTTGAGAAATTCTCTATTGATTTTTTCTTCCTGCCT
TTATTGTTTCTTCTACAGAGAAAGTTTCCACCGTCCCTCTTTTTTGTTCT
GACATAATATCAATGATAAAAGCTCTTCTGCCGTAGACAGAAGTCTATGC
AAAGTAGATAAAAAATTCTacataattcaccaaaatttctaaAAGATGTG
CTAAAAATCGATATCCAAAATAAACCTTACTTTGACCACTGAAGCAGACT
GaagattattgttatttttcagcAATGCAACAAAACAGCAAAACGAAAGT
TTCCTTTACAAGAACAGTTAATGATTCCGTTCCAAAGAATATTGAAATAT
CCTTTATTACTGAGGGTAGGTATTTTCTTCAGCTATCTATTGTTTTTCAA
ATCAATATGATACAGTTGACTGTTTAGTCTCAAGTAACGTTTAATAATTT
TGCTTGCTCTTTCATATTGTGAGATTTATTTGCCATTCTTCAGTCAAATA
ATCAAACCTTGGTTAGTATAGATGACTTCTTTCATTTCAGGATCTGAACA
AACACACACCTGAGACTCATGAAGATAAAAAGGCTGTTGAACAGGCTTAT
GACCTTATGGATGTAGGTTTTATTCATTCTACTTGTCACTACtctgaaca
ataaaaataatctTGAATATAATTTATTATTGCAGGGTCATAGCTTCTGT
TTACTTATAGTTTGTGTTGGCACGTCATATTCTTTGAATTTCATGAATTC
CCTTACAGGATGTGGCCAGATACATTAATGAATACAAAAGAGATGCAGAA
GCAGTTAAAGTGCTGGCGCAAATCGAAGGAAGGTTTGTTGATACCTTGTT
TTATAGTACCTAGTCTCTGAGTATGGTTTTTATCTCATCAGAAAGCTTTT
TATATAGAAACATCCACACGTTTCTTTCTCGCTAATCGTGCATTGGATTA
TGTACCTTTTCTTTTCAGAATAAAGGCTATCATTATTGATTACCGTTATT
CCTTGAtgtaatgaatttttttctctttctagtATAAAATATGAAATGCA
AGCTCAGGGGGTAAGTCTTCATCTTATTTAAATTCAATTGCCTTAAGGTT
GAACTAGCTAGCTTTTGAGGACTAGAAATTGTCTAAGTGCCGAAACTAGA
CTTTCCCTTAAATTGCAAAAGATTACTGTATTTAAATACTTCAGGAATTG
TTTTCTCAAATTGGAGTACTATGAATCATCTTTCATAGAAAAGGGGATAC
CACCATATGAACAGtgtattttattattatatttgAACACAACACAATTT
AATTCATTtaatcattcattcattcgttcattcattccattcattcattc
attcattcattttcaGAGTAAAGGCGGGCAATATGGACGCTACGTTAAAT
GTGGAGAAATTCAAGTCAAATTTGACTCCCAAGAAAAGAAAGTAATAAAG
TAAGAGTCTTATCAAGTTAGTCTCACTTTCAAAGTTATcattggtttgtt
ttgaaacATTGCCAGTAATGTTATGCATTTGCCAAAGATTCTCATTGATT
TATGTCataatttgaagccatttttcaaagtttaaaattttaaaaacagt
cAAGCAATATATTTTCGGATAGAACACTTGTATTTTTATAAGCTTGAGAA
TGGTGATACCATCTCATTGATTTAACATCACTATTTACTCTTTTCTTTTG
TAGACGGTTTGCCTTCTTGTTTCAAAAGTCTATTTTACTGTGCAAACAGA
GAGGGGACTATTATGACGTCAAAGAAATATTTGATATGCAGAAATTTAAA
ATTGCTGACGTACCTCCAGTTGGAAAGGGCAAGGTATGTGGTTTGTTTGG
CTCTTATTGTCAAGGCGAGTAGGTAAAGTTTACGAGACAAAGAAAGTCAC
ATCGGAACAAGGATGACTGGATCTCTAGGCTGGCAATGGTGTATCAACTT
GAGCTTAGCATAATGATTTATAATTGTGTATTTGTTGGAgaatcgagaca
aaaataccattagatttGCTAGAAATTTTCCAACATGGTTTATTATAATG
AGTATACCTTCTTATCTGTCACAATCTCTTTACTTACAGTTCAGTCAAGG
TTGGTCCATGCAGGCACATGCTCCCGATGGTGGTATGTTTATTTAAGTAC
CTTTTGTTATTATCGGAAAGAAACCGGGGTTTATTTTGGTTCGGGAGTCT
TCATATCGAAAGCATAAAgccatttttcaaatctttccaTGATACTTATG
ACACTCTTTCAactcaataaaaaaaaagttcctTTGAATTGTACTGACTT
CTTATTTCTTGTTTTAACTTTCAGTAACAGAACATAAAAATTGCACCATG
TTTGCGAAAACACAGCAGGAGAAAATCAATTGGGTTTCCGAAATTTCTAA
ATGCATGTAAGTATGTCATAATGTGTCGCAGTTTCAAAACCCATAGTAAC
TTATATTTACTTTCGTGTGCCTAATAAACTGCATACTGAATGGTATTTCT
CAATTCTAAGAAAGATTTTGTCATTGTATCTTAAGATCATTGATTTAAGG
CCCGAAGGGCtcgagtagaatctctaaccttcctcaggcaagaaaaagtg
aagcccacttatttcccatctagaaCCTAGAAttcgccgcaatcatgacg
acgaatTGTATCTAGCGCTTCTATTGTTTTTGtggactgcatttttttaa
atctagcgatagattttactttcaatccgtcGTTTGTGTAAAAGCCACGC
GCAGGCGTTCTGTATAGGAAAAGTGTCTTCATTTCCCAttcaggagtctc
gagtctagcccttcgggctttaaactcaatacTTAGGATAATAATGGGCG
ATGTTTTCCTAATTTGTAACttatttttttactcttttacAGAGAGGCGG
TAACTTTATCACAATACGAAGGGAAGTTGGACAAGCATCAATTTGAACTT
ACAACCTTCGAAAAACCACAATGTTGTACTGTTTGTAACAAATTACTAAG
GTAAGCTTTTAATATCACCCATCGTTCGATAGTTTTTCGAATCTTAGCCT
ACAAAAAATGATATGCTGATATTAAAGAACGAATAGTGGTTTTATATTTG
TAACCCAAGATTCGCTCAAAACACTTATTTTACTTTTCAGGGGTCAAGTC
AGTCAAGGCTATAAGTGTAGCAACATTGGTAAGACCGTATTTAATAAAAG
AGCTACACTCTAATCATATGTTTTAGAATTTGAGTGATTTAGGCTACCAA
GAAAAAAAGTACAATTCATTCGATAAAAATTATGAAACTCAAAACTCTAG
AATAAGCTTTAGTTTACCATTTCCATTTAACTATTCAAGGCTGACAACAC
CCAAATTTTCATATGTTTTCTGTACAAAAGATAACGCAATCATCAACGAA
tattttgaaagccatttttcaattttagaatgTGGAGCTATCGTACACAA
AGACTGTTTGGTAAAATGTCCGAGATGTAAGATCGCACCAAGTCGTCCTC
TAAACCCTAAACCTACCAGTAAGTTCTAAGATCATTTTTTTGCAGGAGAA
AGTTCGAAACAGGGAAATTCACATTTtgaaacaaagaaagattttttagc
tAGAGTTCCCTTTCCCCTAATTACAATGATATGCATCTGAATCAAGTTTT
CATTACTATTTTGTAATGATACTAATCCCTGGAATCAAATACTTTCGTTC
AGTTTGAAATGGATTTCTTTTTGAATATCTGTTTTGTtagaaattctaaa
aataaatttccttaCCGCTCAGGATTTACAGAAAACACAGTTTCTCGAAA
GTTTCTCAATATTACTTaacgtattacttcgaataaacgcccggggcgtt
tatttcattttttcgattttaggaagggcgtttattcgagggaggccttt
aaaagaagggggcgtttgtTAAATTATTTGAGTCTAAcgtcgaatattta
gagcaaatctACTCTTTGTTTTAGTTCGATACCAGGATTTCAGTGCAAAT
TTCTTTGGGTCAGCGACTAAAGTTGCATTAAAACTGATCTGGTTACAAAA
AagactaaaatcttccttttcaatcCTAATCAAAACTTGTATCAAAGTAC
AAGCCCCctagagggggcgtttatttgagggggcgtttgttaaataattt
tccttttgttGAGGGGGGcttttaaaagaagggggtcgtttatttgaagt
aatacggtagTTCTCTACTACGTACCCGGagaattatttgtttttgttat
tgatGAATAGGTGGGCGAAGCATGAAATCTTATGAGTGGAGTACAACAAG
GTGAGAAGCTCAAAGAAAGGGCTTTTGATTGTAAATTCAAGCAAACTGTT
TTCGACGAAACTAAAAATTCTTGttcattaaaaatcaatttagaCTGACT
GGTCTTCGTAGTGTTTACGTTTGCTTGAATTTACAGTCACCATTATTTAT
TGTCTTATATGTGTAtactaattttatttttattttcatttactttCATA
TTTCACTCAAATAATTGCACTCCCTTCCTTCACTCGTTCCTTCACTCGTT
CCTTCACTTACCTATTCACAACTTCGACACGACAGTACACTTGAGACCAC
GTGATGCACGGCCTAGAATGTAAGTCACATTATGCACTAAACTAACTTGA
TCCTTGATACCAAAGAGGTAATCTGCAATTCCTGAAATAACATGCCGTCA
CAACTGATTTAGGGACTGGTCATTTGGAGGGTAGACTTGAGTCTTATTAA
ACTAACACAAAGTGTAAAACACgtgaaatcaaaaatgagctTTGATCCCA
CCTTAATCACATGAGCAACGTATTTTGTTCAAGTTTTAGTGAAGGAAGAA
GATAACCTGCTAGGACGAATTACTTACATTACCGTATTGTAACTCGTAAC
AATTGACAATATAATGACAACTTTAAATTTGACACTAAGATAATTCACCG
AGACTTGCACTTCGGGAATGGTCATGAAATATCTATGGGAGAATGGGATG
GATAAACCTCTCTCCCCTAAGGATAccataaacaaaaacaatttcatacT
CACTCTCCTACCACAGTGGGCAGAAATCAGCGGTCAGACACACATTTGGC
CATAAGGTTCGATCTAGATGACTTGGAAAGGTTATTCTggtcaggggggg
ggtcagtactaaaatgtaagacatacatgagtactaaaaggattttcgct
aatttttgacatacccccacctatttttcgaaaatgttattttagtacac
atgtacttaaattattttgagcaatttaacatagataccacccatttttt
gcccttttacgggTTTACATTTACCAAAttggggtcattgttacaaacct
agtgGAATTTAGCGCATCAATCTGCATAATAATATANAGGATTTtagcta
atttttgacatacccccacctatttttcgaaaatgttattttagtacaca
tgtactaaaattattttattactaaactgtgctaaactgtacataaaaat
attttttttaaatatttaaaaaattggaaaaattctgaaagattttttcg
aaaattcctgaaaaaaaaaatcaatttttttccaaaatgttaaaaaaatg
ctccattttggctgattttagaacaaaatactaagatttttcaaatattt
ctttaagggaccacccttttggtattttagtacacatggtactaaaacta
tttttgagcttttttgcagtaccaccacgtcactaaatgtcatgatgtct
gagattttagtaccaaccccctcccccctgttCTGGTTATTCccctgaaa
attttttcctcagatttttccACTTTTTGACTAGAAAAGGCTGTAGAATT
CATTTAAACCAACTTGGAAGTCTTAAAATTGATGGTTACTAAGGGAGAAA
CactaaattttgagaaaatggcCAACCTTTgtcaaaaatggcattttggg
ccgaaaagcaaccaaaaattgcattttttaccACTCAAAATCCTTAGATA
TTAAAAATACATAGGTTCTGACAGATGGATTTTGTTCAGCTGTGGCttcc
aaattttaaaaaatatcacGGTTagcttaaaaaaaattgtgcaaATCAAC
TCTTTTGTTTATAGGGTCACTATCATTCTTGATGGCTCCATTATTGAATA
CTCCAAagtcattttttggaaaatgccATAAGCAGATCAATGCTTTACTG
GGCTATTTAGAAGTAGTTTTTAAtgtagtttttgaaaaaaaacattatgg
TTTCATATGTTCTGCTTCTGGCATTTAGagaaaaaagccttaaaaatggg
atttttccataaatttgataaattcCATTTTAAGGTCAATTTGTAACGAT
TTAAGGGTCTGGACTTTTTTTGGGTACTCCATTGACTTCAAATTTGcctt
aaatttgacaaaaacccaaaaaatcattggaaagaaaagttttgatatAA
AAAACATCACACNATTTGccttaaatttgacaaaaacccaaaaaatcatt
ggaaagaaaagtttttatataaaaaacatcaCACAATTTAGGAACACTCT
CCTCTAAAATCCTCCAAACcttctagtagatactttatgacctCTCCAAG
CTTACCttgaaaaaactaattttgTTGGGGACCAATTTTGGccactcgcc
aaaataaaaaatttcgttTCGTTTCAAAAGCActcatttttaggcaaaaa
agatCAACTTATCGtgtcgttcgccaaaattagttctcagaaaaattaaa
aaaattgctgCTTCGCAAGTGATAAACTACAGCCCGGCtggtaaaaaaac
atttataacGTCTAGATAAAGCTCGATAAATCGAacatgattttaaaagt
ttgcCAGTAGCAGTTGTCTGATATGATGGATTCTGAAACAACGTGTTGTG
CAAGCTGGAAGTCTTTTACTAGAAGTTAGGCTTTGATCGTTCTCTCATAG
CATTCCAAACGCTCACAAGTCACCACCAGCCCAACAAGTTTCACAAATGC
AGATCAGCGACTCCTTCTCTAAATACCACTGGTaagataattgtttttat
ttgtgCAGAAGTAAGTGCTGTTATTTTTTACaaggacaatttttt

Coding sequence (CDS) from alignment at scaffold_46:335720..352464+

>TCONS_00066769 ID=TCONS_00066769|Name=TCONS_00066769|organism=Clytia hemisphaerica|type=CDS|length=1929bp|location=Sequence derived from alignment at scaffold_46:335720..352464+ (Clytia hemisphaerica)
atggtTGCATTAGAATGGCAAATGGCCATCAATTGGGTCCGCTCTACAGA
CATTGAACCTGCAAAAAAACAAGCTCTCAACAAAATAGACGACCTTCTGG
AATTTGCTCAATCCTTACGTGATGGCTATATTTTGTGTCTTGTTGCTAAC
TCTCTGAGGCCAGGAACTATAAAGGATATATCAAAAATTAACAATGTTAA
CATGCATGagTTCTTATGCAACCGGAATATCAGGGCTTTTTTGAAAGCAT
GTACAACTGTTTTCAAGCTTGATGACAAAAAGCTTTTCAAAGCAAAGGAA
CTTTATGAGGCTACAAATTTTGAAGCTGTTATCAAAACATTGTCTCATTT
GTCAAAAACCTCGATAGCAAAAGGAGCAGGCCTAAAACCATTTCCTCCAG
ACGATTATAAGAAACAAAATCACCAGGAGCAAGAAGAAGACATCTATGGC
TCCCTCGGTGAAATATTAGAGGagagagaagaaaaaacagaTTATTACAA
TTATGATGAACAAGAAGAGGATATATATGATCATGTGGAAGTATCTGAAA
AGATCTACGATGATATTGTCCAATGCACACGACAGGCACATGCAGCTACA
AAGCCAGCAGCATCAGATAAGCGTTCACATATCGTAAACGAGATTATTGA
AACTGAAGATACTTATGTAAACCATTTGAAAGTCATGGTGGAGcAATATA
TAAAGCCACTGAAAGCTCACATGTCTTCTCAAGACAAAGAAACTATTTTT
ATCAACACAGAGcCCCTTTATTTATTTCACATGACGTTTAAAAGAGAATT
ATCAACTAGGAGAACAAGTACCAATGTCAAACTAAATCTCAATGCATTTG
ATAAATATaAAGATAAATTTCTAATATATGCAACATATTGCACAGGATTA
GAAGAAGCACAACAACATACCATAGAATTATCAAAAGAATCTGGGTTCAG
GGACAAAGTTGAGcAATGCAACAAAACAGCAAAACGAAAGTTTCCTTTAC
AAGAACAGTTAATGATTCCGTTCCAAAGAATATTGAAATATCCTTTATTA
CTGAGGGATCTGAACAAACACACACCTGAGACTCATGAAGATAAAAAGGC
TGTTGAACAGGCTTATGACCTTATGGATGATGTGGCCAGATACATTAATG
AATACAAAAGAGATGCAGAAGCAGTTAAAGTGCTGGCGCAAATCGAAGGA
AGtATAAAATATGAAATGCAAGCTCAGGGGAGTAAAGGCGGGCAATATGG
ACGCTACGTTAAATGTGGAGAAATTCAAGTCAAATTTGACTCCCAAGAAA
AGAAAGTAATAAAACGGTTTGCCTTCTTGTTTCAAAAGTCTATTTTACTG
TGCAAACAGAGAGGGGACTATTATGACGTCAAAGAAATATTTGATATGCA
GAAATTTAAAATTGCTGACGTACCTCCAGTTGGAAAGGGCAAGTTCAGTC
AAGGTTGGTCCATGCAGGCACATGCTCCCGATGGTGTAACAGAACATAAA
AATTGCACCATGTTTGCGAAAACACAGCAGGAGAAAATCAATTGGGTTTC
CGAAATTTCTAAATGCATAGAGGCGGTAACTTTATCACAATACGAAGGGA
AGTTGGACAAGCATCAATTTGAACTTACAACCTTCGAAAAACCACAATGT
TGTACTGTTTGTAACAAATTACTAAGGGGTCAAGTCAGTCAAGGCTATAA
GTGTAGCAACATTGaatgTGGAGCTATCGTACACAAAGACTGTTTGGTAA
AATGTCCGAGATGTAAGATCGCACCAAGTCGTCCTCTAAACCCTAAACCT
ACCAGTGGGCGAAGCATGAAATCTTATGAGTGGAGTACAACAAGCATTCC
AAACGCTCACAAGTCACCACCAGCCCAACAAGTTTCACAAATGCAGATCA
GCGACTCCTTCTCTAAATACCACTGGTaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041754	XLOC_041754	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00066769-protein	TCONS_00066769-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_46	supercontig	scaffold_46:335720..352464 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.82336	2.49392	1.99537	3.09568	11.0694	10.0833	7.00192	6.00244	7.09571	5.84679	9.82813	5.92241	12.416	12.2392	7.67129	7.23814	15.2923	13.9581	14.1967	13.5227	13.4134	15.4747	11.9818	13.7068	11.9736	13.4958	5.76983	5.38224	5.99854	7.90358

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001849	PH_domain
IPR002219	PE/DAG-bd
IPR000219	DH-domain
IPR001715	CH-domain
IPR011993	PH_dom-like

Vocabulary: **Biological Process**
Term	Definition
GO:0035556	intracellular signal transduction
GO:0035023	regulation of Rho protein signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005089	Rho guanyl-nucleotide exchange factor activity
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0035023	regulation of Rho protein signal transduction
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005089	Rho guanyl-nucleotide exchange factor activity

Blast

[Close]

BLAST of TCONS_00066769 vs. Swiss-Prot (Human)
Match: VAV3 (Guanine nucleotide exchange factor VAV3 OS=Homo sapiens GN=VAV3 PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 9.869e-85
Identity = 208/649 (32.05%), Postives = 340/649 (52.39%), Query Frame = 1

Query:  217 WQMAINWVRSTDIEPAKKQALNKIDDLLEFAQSLRDGYILCLVANSLRPGTIKDISKIN-NVNMHEFLCNRNIRAFLKACTTVXXXXXXXXXXAKELYEATNFEAVIKTLSHLSKTSIAKGAGLKPFPPDDYKKQNHQEQEEDIYGSLGEILEEREEKTDYYNYDEQEEDIYDHV---EVSEKIYDDIVQCTRQAHAATKPAASDKRSHIVNEIIETEDTYVNHLKVMVEQYIKPLKAHMSSQDKETIFINTEPLYLFHMTFKRELSTRRTSTNVKLNLNAFDKYKDKFLIYATYCTGLEEAQQHTIELSK-ESGFRDKVEQCNKTAKR-KFPLQEQLMIPFQRILKYPLLLRDLNKHTPETHEDKKAVEQAYDLMDDVARYINEYKRDAEAVKVLAQIEGSIKYEMQAQGSKGGQYGRYVKCGEIQV-KFDSQEKKVIKRFAFLFQKSILLCKQRGDYYDVKEIFDMQKFKIADVPPVGK--GKFSQGWSM-QAHAPDGVTEHKNCTMFAKTQQEKINWVSEISKCIEAVTLSQYEGKLDKHQFELTTFEKPQCCTVCNKLLRGQVSQGYKCSNIECGAIVHKDCLVKCPRCKIAPSR-----PLNPKPTSG--RSMKSYE-----------WSTTSIPNAHKSPPAQ 2079
            W+    W+    + P   +       + + AQ+LRDG +LC + N+LR  +I ++ +IN    M +FLC +NIR FL AC   F +   +LF+A +L++  +F  VI+TLS LS+T IA   G++PFP ++         +EDIY  L ++++E           E EED+YD V   +   ++Y+D+++   +AH    P  +D RS  + EI +TE+ Y   L+ + + ++ PLK  +++ + +++FIN   L   H    +E+     + N +     F  YK++ +IY  YC+G+E A      +SK +   + K+E+C+K A   KF L++ L++P QR+LKY LLL++L KHT +  E K  ++ A D M D+A+Y+NE KRD E ++ + Q + SI+   Q        +GR    GEI++   D   K+  +R  FLF  ++++CK++GD Y++KEI D+Q++KIA+ P   K   K+S G+ +      +G+        + KT+  K  W+ +    +  +     +     H F++ TF +   C VC  LLRG   QGY C   +CGA  HK+CL +   C    S       L  K T+G  R+ K  +           +S T  P  H+ PP Q
Sbjct:    4 WKQCAQWLIHCKVLPTNHRVTWDSAQVFDLAQTLRDGVLLCQLLNNLRAHSI-NLKEINLRPQMSQFLCLKNIRTFLTACCETFGMRKSELFEAFDLFDVRDFGKVIETLSRLSRTPIALATGIRPFPTEE------SINDEDIYKGLPDLIDE--------TLVEDEEDLYDCVYGEDEGGEVYEDLMK-AEEAHQPKCPE-NDIRSCCLAEIKQTEEKYTETLESIEKYFMAPLKRFLTAAEFDSVFINIPELVKLHRNLMQEIHDSIVNKNDQNLYQVFINYKERLVIYGQYCSGVESAISSLDYISKTKEDVKLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTTDPTE-KANLKLALDAMKDLAQYVNEVKRDNETLREIKQFQLSIENLNQPV----LLFGRPQGDGEIRITTLDKHTKQ--ERHIFLFDLAVIVCKRKGDNYEMKEIIDLQQYKIANNPTTDKENKKWSYGFYLIHTQGQNGL------EFYCKTKDLKKKWLEQFEMALSNIRPDYADSNF--HDFKMHTFTRVTSCKVCQMLLRGTFYQGYLC--FKCGARAHKECLGRVDNCGRVNSGEQGTLKLPEKRTNGLRRTPKQVDPGLPKMQVIRNYSGTPPPALHEGPPLQ 618

The following BLAST results are available for this feature:

BLAST of TCONS_00066769 vs. Swiss-Prot (Human)

BLAST of TCONS_00066769 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VAV3	9.869e-85	32.05	Guanine nucleotide exchange factor VAV3 OS=Homo sa...	[more]

You are here

TCONS_00066769 (transcript) - C. hemisphaerica