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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067426 ID=TCONS_00067426|Name=TCONS_00067426|organism=Clytia hemisphaerica|type=transcript|length=1260bp
cttttaaCAGGAGCAAAACATCATCACTCGATATATGCTTTCCCCAGGAC
GAGGGGTACTAGGTCTACAGGATGAAGGGGGGGGGTGCCGCTAGCCTTTC
GATCCTCGAAATTTACGACCTTTATttggactaatttgaccaaatttcga
tgttTTAGGGGTAAAATATTTCGACACTTAATGGGACAgagattttattt
tctgactcttcaaacCATTACAGGGACTGCCAGGTTCCAAAAAgccaccc
ttaagggcggtACATACCATACCACATCACATACCGTACCTTTACTTGCC
TAAGTACTCCCCCCCCCTGAGATGCTTTTAAACCATTTTTATATTCAAAA
TgattatttgaaagaaaatacagaTAGTTGAGATCAGTGAATCCAAGTTc
aaaagaaacaacaaaattccATCCCAAACATCCCAACAAAGATTGACGTG
TTGAAGACGTGTTGAAAACTGAACACAAACCTTATTTTATGTCGTCATAA
AAAAAATGCAATGAAATTTTTGCAATAATAAATCCATAAAACGAATGTTA
TAAAACTAGAAccataaatataaaataataatcaaaattttaatgataAA
CAAATCACTTGCGAATTATGACTATGCAACTATGGGACATTGAACCTACT
GACCTATAATGAAACCCTGGACTGTGTTATATAcgccatctttgatcaga
gGTTTTAGAAAAGTGGTGCCCTGTGAGTACGGTCATTGAATTTTCCGTCA
CATTCAGGAAAAACCGTCGTCTTCAGGGTACCcctttttaaaaacttcaa
tCAAAGTTATTCGGACGCCAGAACACGCTTTTATTAttagaatagtgtac
tttggccaatttgagggtgaaatattcttaacgtattcttactttttaag
acttgacttttttctacaaagataaaaaacgatcaatttgagagttttgg
acttttgagtgaacatttggtttaaaattacatttcttcctcaaagcttc
aattcATCTCAAACAAAGGAAGcaattttttctgttaaccaaatacaaaa
tgactgcattcttatcaaattctgggAAATTCACCCTaaagggtattctt
agggtattcttacgatttggccaattttcaccctgatattcttatagagg
aaattctttattaaaaaaagcgtgtatagaACAACCCTCAGCTCAGCAAA
AATCtagccaaaatttcgtccccagtggGGAGAATAGCCTACAACTTCAG
CCCTCCCCCC Run BLAST on NCBI transcript from alignment at scaffold_469:536144..537403 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067426 ID=TCONS_00067426|Name=TCONS_00067426|organism=Clytia hemisphaerica|type=transcript|length=1260bp|location=Sequence derived from alignment at scaffold_469:536144..537403 (Clytia hemisphaerica)
GGGGGGAGGGCTGAAGTTGTAGGCTATTCTCCccactggggacgaaattt
tggctaGATTTTTGCTGAGCTGAGGGTTGTtctatacacgctttttttaa
taaagaatttcctctataagaatatcagggtgaaaattggccaaatcgta
agaataccctaagaataccctttAGGGTGAATTTcccagaatttgataag
aatgcagtcattttgtatttggttaacagaaaaaattgCTTCCTTTGTTT
GAGATgaattgaagctttgaggaagaaatgtaattttaaaccaaatgttc
actcaaaagtccaaaactctcaaattgatcgttttttatctttgtagaaa
aaagtcaagtcttaaaaagtaagaatacgttaagaatatttcaccctcaa
attggccaaagtacactattctaaTAATAAAAGCGTGTTCTGGCGTCCGA
ATAACTTTGattgaagtttttaaaaaggGGTACCCTGAAGACGACGGTTT
TTCCTGAATGTGACGGAAAATTCAATGACCGTACTCACAGGGCACCACTT
TTCTAAAACctctgatcaaagatggcgTATATAACACAGTCCAGGGTTTC
ATTATAGGTCAGTAGGTTCAATGTCCCATAGTTGCATAGTCATAATTCGC
AAGTGATTTGTTtatcattaaaattttgattattattttatatttatggT
TCTAGTTTTATAACATTCGTTTTATGGATTTATTATTGCAAAAATTTCAT
TGCATTTTTTTTATGACGACATAAAATAAGGTTTGTGTTCAGTTTTCAAC
ACGTCTTCAACACGTCAATCTTTGTTGGGATGTTTGGGATggaattttgt
tgtttcttttgAACTTGGATTCACTGATCTCAACTAtctgtattttcttt
caaataatcATTTTGAATATAAAAATGGTTTAAAAGCATCTCAGGGGGGG
GGAGTACTTAGGCAAGTAAAGGTACGGTATGTGATGTGGTATGGTATGTa
ccgcccttaagggtggcTTTTTGGAACCTGGCAGTCCCTGTAATGgtttg
aagagtcagaaaataaaatctcTGTCCCATTAAGTGTCGAAATATTTTAC
CCCTAAaacatcgaaatttggtcaaattagtccaaATAAAGGTCGTAAAT
TTCGAGGATCGAAAGGCTAGCGGCACCCCCCCCCTTCATCCTGTAGACCT
AGTACCCCTCGTCCTGGGGAAAGCATATATCGAGTGATGATGTTTTGCTC
CTGttaaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067426-exon-scaffold_469-1491911889:536144..537403 | TCONS_00067426-exon-scaffold_469-1491911889:536144..537403 | Clytia hemisphaerica | exon |
| TCONS_00067426-exon-scaffold_469-1510915933:536144..537403 | TCONS_00067426-exon-scaffold_469-1510915933:536144..537403 | Clytia hemisphaerica | exon |
| TCONS_00067426-exon-scaffold_469-1575043694:536144..537403 | TCONS_00067426-exon-scaffold_469-1575043694:536144..537403 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_469 | supercontig | scaffold_469:536144..537403 . |
Blast
The following BLAST results are available for this feature:
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