TCONS_00067481 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067481
Unique NameTCONS_00067481
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3548

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067481 ID=TCONS_00067481|Name=TCONS_00067481|organism=Clytia hemisphaerica|type=transcript|length=3548bp
TTGGTCATCCCGTTGTTACATCTTTGGTGAACGTTGGTATCACAATCAGT
GGTTGTACATTTAAATTTCATCAATTATTTGATGGTAAAGTCAACATCAG
GTCACTGGATGACGCTGAAACCAAGATCATATCCATTCCCTCCAACCTCA
CCAAGTTATCAGATGACGACTTATACGGTATCGATCCAGTGGTTGTCGAT
TCTTATGTGGATGCTGGTAATTACTATCGATGCAAACTGAAGGATTTGAC
CATTAATAACCAATCAACATCCTCTTCAGCTAGCTCGAGGTTGGACATCA
CTGTTCCCGAGTTCTTGTCTGGTCCCATCACCAGGGAAGATGCTTATTTC
GAGGGTGACCCAATCCGTCTCCAAGGTTGTCGATTTCAATCCATGTTCAA
CAAGGGGTTCACCATGCATTTGATGAAAGACAGCAAAGTTGAGAAGAGCC
TAACAACGCGTGTCGAGTCTTGGACTAATGGTAATTTCACCATTACCTCA
GATATTGGTGAAATTGAAAGCCTGACAAACTCCACTGGAAACTATTCTTG
CAGATTGACTGTTCAAATGGCTACTGCAATGGATACTGAACCAAGATTCA
TTGACATCGAATCAAATGCAACTTCCATCATTGTTAAAGaaaaccAATTA
CATTTCACAAGTCATCCGGATATTCACCGGACACTAAACCAAACATTAGT
TTACGGGTGCAATTACACTAGCGAACGAAATGAAAGTCTGACTCAGTACG
GGTACATCGAATTCAACGGTACATTGTATAAAATCGATGCACAGACTAAC
GAAACTGGGGATCGTTTTGGTAACATTTATCAGTTGCCTGTGTATAAGTT
CGATGGTCGGCTTAGTGAAGGACATTTCTATTGTGTCTTCATGATCGACG
ACACGATAGTCCGCTCAAAAAGGAGTATTCTTTACAATACACCAGAATTC
ATTACCAGACCATCTTCCACCGTGCCAACACCTAAAGGAGTCGAAATTCT
CGGTTGCTCGTTCAAATATCACCAGCTATTACAAGAAGATGCATTCTTTT
CAATTCTCGATTCGAACATGAACGCCATCAGTAGAATTCCTACAACTATC
gtcaaatcaaaagaaagagaTGTGTACGTGTTCAACTCAACCCTGGTTAG
CTCTTACAACAATGTAGGGAAATATGTCAGATGCGACCTGTTCGACCCAA
CAGACATGTTACAACCAGCTGTTTCTCAAATTTCGAATCGAACAAATAGT
TCTCTGCCGTCTTTTGTTCATCAATTAAACTTCACCAGTAGACCTCATTT
CATTGGAGACAAGATTCAGTTTGGTAGCTGTCAATTCACATCTATTTTCA
CCGAGGACGTTCAGTTATCTTACATCTACAATCACCAAGTGTTGACCAAC
ATCTCGATGGATGATGCAATGGTCCAATGGATGGATGACCAAGATCACTT
CCTCATTCAGACACCAATGCTAGAAATGGAGATCTTCAGAAATTCCTCAG
GAAACTATTCATGTCGTCTGCAAGTCATCATAGCAAATGGAAGTGTTTTT
CATCAAGTGGAATCTCAGAATTATTCCCTGGTTGCATTGAGTAATAACGT
CAATTTCACCAGCACTCCCATGGTTCAAAGACTTGCTGATCAACGACTCG
CTGTCATTGGTTGTAACTACGTATCCCCTAGAAACGGAAGTTTGGCTGAA
TACATCAAGATCATCATTAATAGGACGGAAGCAACGCCACCGCCTGTGGT
GACCACTCATGAAATCTGGAATCAAGTACTACCTATTCACGTGTACAGTT
ATTATATTGGGACTGGTGATTTTCAATGTGTTGCTCAGTTTGGTGAAGAA
AGATTCTTATCGGGAAAGTCCACCCTTTATGTTGAGCCAGAAATCCTCAC
CTCACCAACCTACAAAGAATTCAACGAAGACGGGATCACTGTCGAAGGGT
GCACATTCAAATATCACCAGCCTTTGAGCCAAACCTCTTACGTGGTActt
gatcaaaacaaaaacattgtaagAGAGATTCCAGTGAATGTGTCACAGTC
TGGTGTCGATACCTATTTCACGGATCCTTTGATTGTTGACAATTATGAAA
ATCTTGGAGTTTATTACCAATGTCGATTGTCATATTTTGGTGAAACAGAT
TCATTGTTCAAAATATCAGATTTGTCGGTTGCTGCACCTTACACTTTACC
TTCAAAGACCAATTGTCCAAGGGAGGGAGGATTCTGTGCCCTGTCAAACG
GATTTAATCAGAACTCTGGTGTGATTCAATTGGATGCATTGGGTGGAAAC
AGTGAGGAAAGACATGAAGAATGTTTGGAAAAATGCATTGCTTACCCAGG
GCAGACTACTGGCTGTGAATTGTATTGGCTTGATACATCGGATCAGGGTT
GTTATGTACACACACAACCAATCGCTAGAACTAACGGATTAGACTCCATT
CAAAGTTGTTGGGTGTTCTCCAAGTGTAAAACAACACCATCTTTCACCAG
GACATTCTCTTCACCACCAGTCTACATTGGTGATAAGATGAACACCACTG
GATGCCAGTACAAAACACTCTTCACTAAAGGAATTCAATTCTACGAAGTT
AAAAATGAGATGGAGTACAATATCATCGAAAATAAATCAATGGACATGAC
ATGGCATGGCGATCATCATCTGGTCACTTATGTATTGGATAATAATTCAA
CCATTTTGACGAAAGAATTACGTGCTAATTTCTCTTGTATGGTGAAATAT
GTTCATCTGAATAAAACGGAGACAACTGGTTCTGAAGTAGCTTTCCACGA
TGTTCGAAGTAACGATGTTCGATTCATGACCAAGCCGACTTTATACCGGA
CACACAACGAAACTATCGTCAAAGGATGTCAATTTACGACGGCGAATGTG
GAGAGTGCCGTTAGCAGTGGTTTCATCAGATACAACCAAACTGCACATTA
CGTTGGTTCAACATTGAGTTTTGAGAACGACAAGGGAATACTTTCTTTCC
CTGAATGGAAGTTCCCTTATCGAATCAACTCTGGTGACTTTTGGTGTGTT
GTTCGAGTTGGCTTTCCGGTCGTTCTTGAGGAGTTTGTCTCCAATTCATC
GATGCTGTACAAAGAACCAGAAATCCTCACCTCACCAACCTACAAAGAGT
TTAACGAAGACGGGATCACTGTCGAAGGGTGCACATTCAAATATCACCAG
CCTTTGAGCCAAACCTCTTATTTGGTActtgatcaaaacaaaaacattgt
aagAGTGATTCCAGTGAATGTGTCACAGTCTGGTGTCGATACCTATTTCA
CGGATCCTTTGATTGttgataattatgaaaatcTTGGAGTTTATTACCAA
TGTCGATTGTCATATTTTGGTGAAACAGATTCATTgttcaaagtatcaga
tttGTCGGTTGCTGCACCTTATACTTtACCTTCAAAAGGAAACTGTCCTA
AAGAACTAGGATTCTGTGTTACTCAAAATGGGGCTGACCAGAACTCTGAT
GTGATCCAATTGGATGCATTGGATGGAAACAGTGAAGAAAGACACCAA
Run BLAST on NCBI

protein sequence of TCONS_00067481-protein

>TCONS_00067481-protein ID=TCONS_00067481-protein|Name=TCONS_00067481-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1182bp
GHPVVTSLVNVGITISGCTFKFHQLFDGKVNIRSLDDAETKIISIPSNLT
KLSDDDLYGIDPVVVDSYVDAGNYYRCKLKDLTINNQSTSSSASSRLDIT
VPEFLSGPITREDAYFEGDPIRLQGCRFQSMFNKGFTMHLMKDSKVEKSL
TTRVESWTNGNFTITSDIGEIESLTNSTGNYSCRLTVQMATAMDTEPRFI
DIESNATSIIVKENQLHFTSHPDIHRTLNQTLVYGCNYTSERNESLTQYG
YIEFNGTLYKIDAQTNETGDRFGNIYQLPVYKFDGRLSEGHFYCVFMIDD
TIVRSKRSILYNTPEFITRPSSTVPTPKGVEILGCSFKYHQLLQEDAFFS
ILDSNMNAISRIPTTIVKSKERDVYVFNSTLVSSYNNVGKYVRCDLFDPT
DMLQPAVSQISNRTNSSLPSFVHQLNFTSRPHFIGDKIQFGSCQFTSIFT
EDVQLSYIYNHQVLTNISMDDAMVQWMDDQDHFLIQTPMLEMEIFRNSSG
NYSCRLQVIIANGSVFHQVESQNYSLVALSNNVNFTSTPMVQRLADQRLA
VIGCNYVSPRNGSLAEYIKIIINRTEATPPPVVTTHEIWNQVLPIHVYSY
YIGTGDFQCVAQFGEERFLSGKSTLYVEPEILTSPTYKEFNEDGITVEGC
TFKYHQPLSQTSYVVLDQNKNIVREIPVNVSQSGVDTYFTDPLIVDNYEN
LGVYYQCRLSYFGETDSLFKISDLSVAAPYTLPSKTNCPREGGFCALSNG
FNQNSGVIQLDALGGNSEERHEECLEKCIAYPGQTTGCELYWLDTSDQGC
YVHTQPIARTNGLDSIQSCWVFSKCKTTPSFTRTFSSPPVYIGDKMNTTG
CQYKTLFTKGIQFYEVKNEMEYNIIENKSMDMTWHGDHHLVTYVLDNNST
ILTKELRANFSCMVKYVHLNKTETTGSEVAFHDVRSNDVRFMTKPTLYRT
HNETIVKGCQFTTANVESAVSSGFIRYNQTAHYVGSTLSFENDKGILSFP
EWKFPYRINSGDFWCVVRVGFPVVLEEFVSNSSMLYKEPEILTSPTYKEF
NEDGITVEGCTFKYHQPLSQTSYLVLDQNKNIVRVIPVNVSQSGVDTYFT
DPLIVDNYENLGVYYQCRLSYFGETDSLFKVSDLSVAAPYTLPSKGNCPK
ELGFCVTQNGADQNSDVIQLDALDGNSEERHQ
Run BLAST on NCBI

transcript from alignment at scaffold_47:277555..284658-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067481 ID=TCONS_00067481|Name=TCONS_00067481|organism=Clytia hemisphaerica|type=transcript|length=7104bp|location=Sequence derived from alignment at scaffold_47:277555..284658- (Clytia hemisphaerica)
TTGGTCATCCCGTTGTTACATCTTTGGTGAACGTTGGTATCACAATCAGT
GGTTGTACATTTAAATTTCATCAATTATTTGATGGTAAAGTCAACATCAG
GTCACTGGATGACGCTGAAACCAAGATCATATCCATTCCCTCCAACCTCA
CCAAGTTATCAGATGACGACTTATACGGTATCGATCCAGTGGTTGTCGAT
TCTTATGTGGATGCTGGTAATTACTATCGATGCAAACTGAAGGATTTGAC
CATTAATAACCAATCAACATCCTCTTCAGCTAGCTCGAGGTTGGACATCA
CTGGTAAGTTTAATACTAATGCTACATCGAAAAGAATGAACAATTTATAA
CAGGAAATCAAATTTGATGAAATTTACGGTTTCTCCAAGAAGGTTCAAGC
TTAAGTTTTCGTGAAGCCCTTGAAATTAAAAACGATGTTTTTCATCTGTT
TTTTTTCATTTTTAATGTGTATAGCAATATACGATATATTCTAAATGACA
ATCGCTTTTCTTTGCTCTTTACAACAGTTCCCGAGTTCTTGTCTGGTCCC
ATCACCAGGGAAGATGCTTATTTCGAGGGTGACCCAATCCGTCTCCAAGG
TTGTCGATTTCAATCCATGTTCAACAAGGGGTTCACCATGCATTTGATGA
AAGACAGCAAAGTTGAGAAGAGCCTAACAACGCGTGTCGAGTCTTGGACT
AATGGTAATTTCACCATTACCTCAGATATTGGTGAAATTGAAAGCCTGAC
AAACTCCACTGGAAACTATTCTTGCAGATTGACTGTTCAAATGGCTACTG
CAATGGATACTGAACCAAGATTCATTGACATCGAATCAAATGCAACTTCC
ATCATTGTTAAAGGTGATATATAATACGATCTAAACAATAAGAACTTAAA
ATAAATACATCTTGAACAAGCCTTGAAGTAACCTCGTTGTTCTGTTTTCT
TTTTCTTTCAGAAAACCAATTACATTTCACAAGTCATCCGGATATTCACC
GGACACTAAACCAAACATTAGTTTACGGGTGCAATTACACTAGCGAACGA
AATGAAAGTCTGACTCAGTACGGGTACATCGAATTCAACGGTACATTGTA
TAAAATCGATGCACAGACTAACGAAACTGGGGATCGTTTTGGTAACATTT
ATCAGTTGCCTGTGTATAAGTTCGATGGTCGGCTTAGTGAAGGACATTTC
TATTGTGTCTTCATGATCGACGACACGATAGTCCGCTCAAAAAGGAGTAT
TCTTTACAATACACCAGGTAATCCGTGCTATATTTTGAATGTTTGAAAGA
ATTGCTAATCTAACCTGACCTTTCTATTGGTTTTCCAGGGTATATATTTG
GATAGAGAAATTTTGTTTCTTCAAAATTATTGATAAAAAAACATTTTTTG
AGCTATCTTATTTATAATCTTTTGGTAAGATAAGCTCTACGTTCGCTATT
ATAATAATTTTGGAAAGGTCTTTTCATTTCAAAACCAATCAAAACACTTT
TTATCTCGTAGAATTCATTACCAGACCATCTTCCACCGTGCCAACACCTA
AAGGAGTCGAAATTCTCGGTTGCTCGTTCAAATATCACCAGCTATTACAA
GAAGATGCATTCTTTTCAATTCTCGATTCGAACATGAACGCCATCAGTAG
AATTCCTACAACTATCGTCAAATCAAAAGAAAGAGATGTGTACGTGTTCA
ACTCAACCCTGGTTAGCTCTTACAACAATGTAGGGAAATATGTCAGATGC
GACCTGTTCGACCCAACAGACATGTTACAACCAGCTGTTTCTCAAATTTC
GAATCGAACAAATAGTTCTCGTAAGTCTCAAAAGTCTCAGAATTTCCAAT
CAGTCATTCCTGACCGTTTCAATGATTGATTAATGCCTAACCCGGAGTTG
CAAACCTGTTCAAGAACTATGCAATGACATCAAAATGAGGAGGGTTGCAG
ATACCTGAGTCTGATCTAGCGACCTTACATGTCTTTGTTATATGACGATT
CTATAACTGGTTAGATAAGTACTAACCATATGTCACCACTATAAAGGTAT
ATAAGCTCCGTTTTTAGCATTAATTTCTTAGCCAGCTCCTGATTTCCAGA
GCCAAAAACTGACCAGTAATTTCCACGAGGCTTCTCTTTTTTTCTACAGT
GCCGTCTTTTGTTCATCAATTAAACTTCACCAGTAGACCTCATTTCATTG
GAGACAAGATTCAGTTTGGTAGCTGTCAATTCACATCTATTTTCACCGAG
GACGTTCAGTTATCTTACATCTACAATCACCAAGTGTTGACCAACATCTC
GATGGATGATGCAATGGTCCAATGGATGGATGACCAAGATCACTTCCTCA
TTCAGACACCAATGCTAGAAATGGAGATCTTCAGAAATTCCTCAGGAAAC
TATTCATGTCGTCTGCAAGTCATCATAGCAAATGGAAGTGTTTTTCATCA
AGTGGAATCTCAGAATTATTCCCTGGTTGCATTGAGTATGTTATTTTTAC
ATTTTTCTCCTTTTGAAAATAAAAGGAAATCCTAGTCTTGTATGACTTTT
GCAAATACCCACTCTGAAATTCTAGTTACGACCTTATTAACCCCAACAAG
CTTTACGAAGTAAACATCAATCTTCTGTCCATTCATTTTTCATACATCCT
TATACCCTTTAGAAAATGACTTGAAGTGATCACAATGGTCTAACATTTAA
AGACAGAGAAGGTTTTATATTGAGGAATTATGTTGAATATGTGTTTTCTA
ATCTCAGGTAATAACGTCAATTTCACCAGCACTCCCATGGTTCAAAGACT
TGCTGATCAACGACTCGCTGTCATTGGTTGTAACTACGTATCCCCTAGAA
ACGGAAGTTTGGCTGAATACATCAAGATCATCATTAATAGGACGGAAGCA
ACGCCACCGCCTGTGGTGACCACTCATGAAATCTGGAATCAAGTACTACC
TATTCACGTGTACAGTTATTATATTGGGACTGGTGATTTTCAATGTGTTG
CTCAGTTTGGTGAAGAAAGATTCTTATCGGGAAAGTCCACCCTTTATGTT
GAGCCAGGTACTTTGATTTCCACAAGCAAAGCTTTTTCAGTCTTTTAACG
TTTATGTTGTTGTACGGAACATTAGATTGGAAATTATGGAGTGTCAAAGT
TTTTGTGAGTTAAGCTGATATTTGACTCAATTAATAAATAATGTCAATAA
TTCTTAAGGTGTTGGCCATACTTGATTTTTTCATACTGTTATCCCTCAGA
AATCCTCACCTCACCAACCTACAAAGAATTCAACGAAGACGGGATCACTG
TCGAAGGGTGCACATTCAAATATCACCAGCCTTTGAGCCAAACCTCTTAC
GTGGTACTTGATCAAAACAAAAACATTGTAAGAGAGATTCCAGTGAATGT
GTCACAGTCTGGTGTCGATACCTATTTCACGGATCCTTTGATTGTTGACA
ATTATGAAAATCTTGGAGTTTATTACCAATGTCGATTGTCATATTTTGGT
GAAACAGATTCATTGTTCAAAATATCAGATTTGTCGGTTGCTGCACCTTA
CACTTGTAAGCCTTCTTATTATTTATTTTTGCCAATTCTCTTCTAGATAA
TTCGAAGTCAACAATTTAACCTTTTTCATTTTCGTGATTGATGAGCTTTA
ACATTCAAACTATAATGTGACAATTTAGAACCACTGACCACTGACCATTA
CATCATTTAAATTTGCATTCGTTTAGTACCTTCAAAGACCAATTGTCCAA
GGGAGGGAGGATTCTGTGCCCTGTCAAACGGATTTAATCAGAACTCTGGT
GTGATTCAATTGGATGCATTGGGTGGAAACAGTGAGGAAAGACATGAAGA
ATGTTTGGAAAAATGCATTGCTTACCCAGGGCAGACTACTGGCTGTGAAT
TGTATTGGCTTGATACATCGGATCAGGGTTGTTATGTACACACACAACCA
ATCGCTAGAACTAACGGATTAGACTCCATTCAAAGTTGTTGGGTGTTCTC
CAAGTGTAAAACAAGTAAGAGAGGTTACTTTCTTGTATTTACTACTTTCT
GTTACTGCAAGCTACTAATTAATAGGACTAAATACCCTTTTTTATAAGAA
TAATGAGCCTCAAAATCGTCAAAACAATTTTGCATCAAAGTAAAAAAAAC
GAGGTAAGTCTAAACACCTCGATTTTCTCCCAAAAATGCCAAAAAATAGC
CTTGGCTCGACAAAAATTGATTGGTTCTTATGGATGTAAGTTTGAAAGGC
TCAAATAGATGCGGGACAGTAGATATAGTTTATCTTATGTTATTCTGTTT
CTGAGGCTTTTCTTTGTTCTTCAGTATGTGTCAAAGGTTGCAAACCTGGT
GCACTGACTCATTAATCTCATAGTTATCCTACTCGAAATACTGTGATAGA
GACGGCAATTTATTAGTCAGATTTTAACTAAATTAAAAATTCCGATCGTG
CTGTCAAACTTACATGTTTTAAAACTCATTACCTTCATTTCAGCACCATC
TTTCACCAGGACATTCTCTTCACCACCAGTCTACATTGGTGATAAGATGA
ACACCACTGGATGCCAGTACAAAACACTCTTCACTAAAGGAATTCAATTC
TACGAAGTTAAAAATGAGATGGAGTACAATATCATCGAAAATAAATCAAT
GGACATGACATGGCATGGCGATCATCATCTGGTCACTTATGTATTGGATA
ATAATTCAACCATTTTGACGAAAGAATTACGTGCTAATTTCTCTTGTATG
GTGAAATATGTTCATCTGAATAAAACGGAGACAACTGGTTCTGAAGTAGC
TTTCCACGATGTTCGAAGTGAGTGTGGCTTATGAGCATGTTTATGTTTCA
CATAATATTAGGTGTTATACCTTATTGTTAACCGGTTACTTTTTCGAAGC
GGGCTACATGGCTTTTTGCGCACTGCAATTGGTTCATTTCGCATGACGAC
GGGCCTACATTGTCCAGAGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGCCCTCGGTCAACGCAACAACCTCGCAAGC
TCGGTCGTTACTTGACCTCGGGCAATATTTCTCAGTACAGCCCTCACTAA
CCGGTCATTATTGTATTAGGGTACATCTTTAAATCTGGGTTTCACATCAT
GGAGAAATATAGAATAGTGATGCAGACTTGCAGAATAAGTCTTCGCCGTG
AGAAAAATCGATTTGAACCGCTAAGAATAAAATACTGCACGCTTTGTGTC
GAGTTTTAAAGAGTACAAAGGATTGAATAACTAAAGCAAGTCGCTCATAA
CCCGACTCAACTATCATAAAATCATTGCCAGTGGAAGTTATGATTCAATT
ATAGGAATTTTTTTCTTATTACCACGCCTTTTAGAACATCCTCAACTTTT
TTATACAATGTTATATCAATGAGTAATACCGTTACCGGTTTTACACATAG
GTATTGAATTGATTTATGTAAAAGATTCAAAATTATAAAACCCCTTTGCT
AAAAGACATATGATATGAAAAATCTTTATAGAAATTAATATGTAGAACAT
TTTACAGATGAAATCAATATTCGAGTTATGCATCGGAAAACTGACAAATT
CGAATTTAAAATGCTTCATAGAATTTGCTAACCATTGATTTGATTATGGA
TTATCTCAAGTTATCAACAACCCTTTGGTTATTTTGTTTCTGTTTTTGCC
AAGGTAACGATGTTCGATTCATGACCAAGCCGACTTTATACCGGACACAC
AACGAAACTATCGTCAAAGGATGTCAATTTACGACGGCGAATGTGGAGAG
TGCCGTTAGCAGTGGTTTCATCAGATACAACCAAACTGCACATTACGTTG
GTTCAACATTGAGTTTTGAGAACGACAAGGGAATACTTTCTTTCCCTGAA
TGGAAGTTCCCTTATCGAATCAACTCTGGTGACTTTTGGTGTGTTGTTCG
AGTTGGCTTTCCGGTCGTTCTTGAGGAGTTTGTCTCCAATTCATCGATGC
TGTACAAAGAACCAGGTAGAGATGATTTTTCCCAAGACTTTTCGACAGAC
AGTGTTGAGTAAATGGTTTCTTACGAATTTCCCATTTAGAATATAAAGTA
AATTTATTTTCTTTTTGCTTTGTCAGAAATCCTCACCTCACCAACCTACA
AAGAGTTTAACGAAGACGGGATCACTGTCGAAGGGTGCACATTCAAATAT
CACCAGCCTTTGAGCCAAACCTCTTATTTGGTACTTGATCAAAACAAAAA
CATTGTAAGAGTGATTCCAGTGAATGTGTCACAGTCTGGTGTCGATACCT
ATTTCACGGATCCTTTGATTGTTGATAATTATGAAAATCTTGGAGTTTAT
TACCAATGTCGATTGTCATATTTTGGTGAAACAGATTCATTGTTCAAAGT
ATCAGATTTGTCGGTTGCTGCACCTTATACTTGTAAGCCTTCTTTTTATT
TCTTTGTACCAATTCTCTTCCGAATCAATCAAAGTCTTATTAGCTGTAAA
AGAGCTTTTCTTTCTGGATCGAAACAAACATGGTATTAGAAATGTTGTGG
TGTCGAAGTCCTTTAATAATCTGTCGATCTGTGAAAGACTCATGTTTTCA
GGTGCTTTAAAAAAATGATTATTTTAAAAATTAAGCAGGGATACAATTCT
CATATCTTTAATCCCTTTTTAAATTTATTTAGTACCTTCAAAAGGAAACT
GTCCTAAAGAACTAGGATTCTGTGTTACTCAAAATGGGGCTGACCAGAAC
TCTGATGTGATCCAATTGGATGCATTGGATGGAAACAGTGAAGAAAGACA
CCAA

Coding sequence (CDS) from alignment at scaffold_47:277555..284658-

>TCONS_00067481 ID=TCONS_00067481|Name=TCONS_00067481|organism=Clytia hemisphaerica|type=CDS|length=3546bp|location=Sequence derived from alignment at scaffold_47:277555..284658- (Clytia hemisphaerica)
GGTCATCCCGTTGTTACATCTTTGGTGAACGTTGGTATCACAATCAGTGG
TTGTACATTTAAATTTCATCAATTATTTGATGGTAAAGTCAACATCAGGT
CACTGGATGACGCTGAAACCAAGATCATATCCATTCCCTCCAACCTCACC
AAGTTATCAGATGACGACTTATACGGTATCGATCCAGTGGTTGTCGATTC
TTATGTGGATGCTGGTAATTACTATCGATGCAAACTGAAGGATTTGACCA
TTAATAACCAATCAACATCCTCTTCAGCTAGCTCGAGGTTGGACATCACT
GTTCCCGAGTTCTTGTCTGGTCCCATCACCAGGGAAGATGCTTATTTCGA
GGGTGACCCAATCCGTCTCCAAGGTTGTCGATTTCAATCCATGTTCAACA
AGGGGTTCACCATGCATTTGATGAAAGACAGCAAAGTTGAGAAGAGCCTA
ACAACGCGTGTCGAGTCTTGGACTAATGGTAATTTCACCATTACCTCAGA
TATTGGTGAAATTGAAAGCCTGACAAACTCCACTGGAAACTATTCTTGCA
GATTGACTGTTCAAATGGCTACTGCAATGGATACTGAACCAAGATTCATT
GACATCGAATCAAATGCAACTTCCATCATTGTTAAAGAAAACCAATTACA
TTTCACAAGTCATCCGGATATTCACCGGACACTAAACCAAACATTAGTTT
ACGGGTGCAATTACACTAGCGAACGAAATGAAAGTCTGACTCAGTACGGG
TACATCGAATTCAACGGTACATTGTATAAAATCGATGCACAGACTAACGA
AACTGGGGATCGTTTTGGTAACATTTATCAGTTGCCTGTGTATAAGTTCG
ATGGTCGGCTTAGTGAAGGACATTTCTATTGTGTCTTCATGATCGACGAC
ACGATAGTCCGCTCAAAAAGGAGTATTCTTTACAATACACCAGAATTCAT
TACCAGACCATCTTCCACCGTGCCAACACCTAAAGGAGTCGAAATTCTCG
GTTGCTCGTTCAAATATCACCAGCTATTACAAGAAGATGCATTCTTTTCA
ATTCTCGATTCGAACATGAACGCCATCAGTAGAATTCCTACAACTATCGT
CAAATCAAAAGAAAGAGATGTGTACGTGTTCAACTCAACCCTGGTTAGCT
CTTACAACAATGTAGGGAAATATGTCAGATGCGACCTGTTCGACCCAACA
GACATGTTACAACCAGCTGTTTCTCAAATTTCGAATCGAACAAATAGTTC
TCTGCCGTCTTTTGTTCATCAATTAAACTTCACCAGTAGACCTCATTTCA
TTGGAGACAAGATTCAGTTTGGTAGCTGTCAATTCACATCTATTTTCACC
GAGGACGTTCAGTTATCTTACATCTACAATCACCAAGTGTTGACCAACAT
CTCGATGGATGATGCAATGGTCCAATGGATGGATGACCAAGATCACTTCC
TCATTCAGACACCAATGCTAGAAATGGAGATCTTCAGAAATTCCTCAGGA
AACTATTCATGTCGTCTGCAAGTCATCATAGCAAATGGAAGTGTTTTTCA
TCAAGTGGAATCTCAGAATTATTCCCTGGTTGCATTGAGTAATAACGTCA
ATTTCACCAGCACTCCCATGGTTCAAAGACTTGCTGATCAACGACTCGCT
GTCATTGGTTGTAACTACGTATCCCCTAGAAACGGAAGTTTGGCTGAATA
CATCAAGATCATCATTAATAGGACGGAAGCAACGCCACCGCCTGTGGTGA
CCACTCATGAAATCTGGAATCAAGTACTACCTATTCACGTGTACAGTTAT
TATATTGGGACTGGTGATTTTCAATGTGTTGCTCAGTTTGGTGAAGAAAG
ATTCTTATCGGGAAAGTCCACCCTTTATGTTGAGCCAGAAATCCTCACCT
CACCAACCTACAAAGAATTCAACGAAGACGGGATCACTGTCGAAGGGTGC
ACATTCAAATATCACCAGCCTTTGAGCCAAACCTCTTACGTGGTACTTGA
TCAAAACAAAAACATTGTAAGAGAGATTCCAGTGAATGTGTCACAGTCTG
GTGTCGATACCTATTTCACGGATCCTTTGATTGTTGACAATTATGAAAAT
CTTGGAGTTTATTACCAATGTCGATTGTCATATTTTGGTGAAACAGATTC
ATTGTTCAAAATATCAGATTTGTCGGTTGCTGCACCTTACACTTTACCTT
CAAAGACCAATTGTCCAAGGGAGGGAGGATTCTGTGCCCTGTCAAACGGA
TTTAATCAGAACTCTGGTGTGATTCAATTGGATGCATTGGGTGGAAACAG
TGAGGAAAGACATGAAGAATGTTTGGAAAAATGCATTGCTTACCCAGGGC
AGACTACTGGCTGTGAATTGTATTGGCTTGATACATCGGATCAGGGTTGT
TATGTACACACACAACCAATCGCTAGAACTAACGGATTAGACTCCATTCA
AAGTTGTTGGGTGTTCTCCAAGTGTAAAACAACACCATCTTTCACCAGGA
CATTCTCTTCACCACCAGTCTACATTGGTGATAAGATGAACACCACTGGA
TGCCAGTACAAAACACTCTTCACTAAAGGAATTCAATTCTACGAAGTTAA
AAATGAGATGGAGTACAATATCATCGAAAATAAATCAATGGACATGACAT
GGCATGGCGATCATCATCTGGTCACTTATGTATTGGATAATAATTCAACC
ATTTTGACGAAAGAATTACGTGCTAATTTCTCTTGTATGGTGAAATATGT
TCATCTGAATAAAACGGAGACAACTGGTTCTGAAGTAGCTTTCCACGATG
TTCGAAGTAACGATGTTCGATTCATGACCAAGCCGACTTTATACCGGACA
CACAACGAAACTATCGTCAAAGGATGTCAATTTACGACGGCGAATGTGGA
GAGTGCCGTTAGCAGTGGTTTCATCAGATACAACCAAACTGCACATTACG
TTGGTTCAACATTGAGTTTTGAGAACGACAAGGGAATACTTTCTTTCCCT
GAATGGAAGTTCCCTTATCGAATCAACTCTGGTGACTTTTGGTGTGTTGT
TCGAGTTGGCTTTCCGGTCGTTCTTGAGGAGTTTGTCTCCAATTCATCGA
TGCTGTACAAAGAACCAGAAATCCTCACCTCACCAACCTACAAAGAGTTT
AACGAAGACGGGATCACTGTCGAAGGGTGCACATTCAAATATCACCAGCC
TTTGAGCCAAACCTCTTATTTGGTACTTGATCAAAACAAAAACATTGTAA
GAGTGATTCCAGTGAATGTGTCACAGTCTGGTGTCGATACCTATTTCACG
GATCCTTTGATTGTTGATAATTATGAAAATCTTGGAGTTTATTACCAATG
TCGATTGTCATATTTTGGTGAAACAGATTCATTGTTCAAAGTATCAGATT
TGTCGGTTGCTGCACCTTATACTTTACCTTCAAAAGGAAACTGTCCTAAA
GAACTAGGATTCTGTGTTACTCAAAATGGGGCTGACCAGAACTCTGATGT
GATCCAATTGGATGCATTGGATGGAAACAGTGAAGAAAGACACCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042144XLOC_042144Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067481-exon-scaffold_47-1575043694:284356..284658TCONS_00067481-exon-scaffold_47-1575043694:284356..284658Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:283796..284131TCONS_00067481-exon-scaffold_47-1575043694:283796..284131Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:283392..283697TCONS_00067481-exon-scaffold_47-1575043694:283392..283697Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:282839..283147TCONS_00067481-exon-scaffold_47-1575043694:282839..283147Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:282174..282509TCONS_00067481-exon-scaffold_47-1575043694:282174..282509Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:281602..281901TCONS_00067481-exon-scaffold_47-1575043694:281602..281901Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:281104..281409TCONS_00067481-exon-scaffold_47-1575043694:281104..281409Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:280645..280932TCONS_00067481-exon-scaffold_47-1575043694:280645..280932Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:279842..280165TCONS_00067481-exon-scaffold_47-1575043694:279842..280165Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:278344..278655TCONS_00067481-exon-scaffold_47-1575043694:278344..278655Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:277927..278232TCONS_00067481-exon-scaffold_47-1575043694:277927..278232Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1575043694:277555..277676TCONS_00067481-exon-scaffold_47-1575043694:277555..277676Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:284356..284658TCONS_00067481-exon-scaffold_47-1510915933:284356..284658Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:283796..284131TCONS_00067481-exon-scaffold_47-1510915933:283796..284131Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:283392..283697TCONS_00067481-exon-scaffold_47-1510915933:283392..283697Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:282839..283147TCONS_00067481-exon-scaffold_47-1510915933:282839..283147Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:282174..282509TCONS_00067481-exon-scaffold_47-1510915933:282174..282509Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:281602..281901TCONS_00067481-exon-scaffold_47-1510915933:281602..281901Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:281104..281409TCONS_00067481-exon-scaffold_47-1510915933:281104..281409Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:280645..280932TCONS_00067481-exon-scaffold_47-1510915933:280645..280932Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:279842..280165TCONS_00067481-exon-scaffold_47-1510915933:279842..280165Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:278344..278655TCONS_00067481-exon-scaffold_47-1510915933:278344..278655Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:277927..278232TCONS_00067481-exon-scaffold_47-1510915933:277927..278232Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1510915933:277555..277676TCONS_00067481-exon-scaffold_47-1510915933:277555..277676Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:284356..284658TCONS_00067481-exon-scaffold_47-1491911889:284356..284658Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:283796..284131TCONS_00067481-exon-scaffold_47-1491911889:283796..284131Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:283392..283697TCONS_00067481-exon-scaffold_47-1491911889:283392..283697Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:282839..283147TCONS_00067481-exon-scaffold_47-1491911889:282839..283147Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:282174..282509TCONS_00067481-exon-scaffold_47-1491911889:282174..282509Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:281602..281901TCONS_00067481-exon-scaffold_47-1491911889:281602..281901Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:281104..281409TCONS_00067481-exon-scaffold_47-1491911889:281104..281409Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:280645..280932TCONS_00067481-exon-scaffold_47-1491911889:280645..280932Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:279842..280165TCONS_00067481-exon-scaffold_47-1491911889:279842..280165Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:278344..278655TCONS_00067481-exon-scaffold_47-1491911889:278344..278655Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:277927..278232TCONS_00067481-exon-scaffold_47-1491911889:277927..278232Clytia hemisphaericaexon
TCONS_00067481-exon-scaffold_47-1491911889:277555..277676TCONS_00067481-exon-scaffold_47-1491911889:277555..277676Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067481-proteinTCONS_00067481-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:277555..284658 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0637516	0.0362455	0.0601523	0	0.057315	0.0113228	0	0	0	0.0332718	0	0.0141527	0.0141331	0.0733866	0.0362002	0	0.22637	0.0616223	0.0338847	0.0236386	0.269003	0.102235	0.0243654	0.0526293	0.656593	0.567356	0.177083	0.232143	0	0.0240308
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR007110Ig-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067481 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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