TCONS_00067581 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00067581
Unique Name	TCONS_00067581
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3088

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_471:437667..447315+
coding sequence from alignment at scaffold_471:437667..447315+

transcript sequence

>TCONS_00067581 ID=TCONS_00067581|Name=TCONS_00067581|organism=Clytia hemisphaerica|type=transcript|length=3088bp
CTTACCAACTATCATTCTGCTGGTCctttttttcagcaaaataagagaca
ttTTCATATCTTTGATGGTTCAGTTATTGggtaaaaactttataaatcgA
CGTCGGCAGGCCATCAGAGCGGTTGTCAAAGCATGTCTGCCAGAATTTCT
GAACAAAGTTTTCCTGCGCGTGCTGGGATTGGTGACTTTGGAAGGTGCAC
CTGAAGCGATCGACAACAAACCACACAACAGTAAATACAAGAGGAGGAAG
AATGGAGAGAAATCTTCCTCCAAACATCGcaacaaaaaacgaaaaaagaa
aagTTCATCATCCAAGAAGAGCAACCATCACGGATCGCGCAAAGAAGATG
AAGTCGATGGCAAAGGCCGGTCGTTGAGTGAAAACGAAGAATCACCGGTC
GAAGATACGGATGATGAAGAACAAGAGGACGTCTCTGATTATTGCACTGG
TGGTTACCATGTGGTCAACATCGGTGATCTCTTCCAAGGGAGATATCATG
TCATACGAAAACTTGGATGGGGTCATTTCTCCACTGTCTGGCTAGCATGG
GATCTCACAGAGAAGAAGTTTGTGGCGTTGAAGATTGTGAAAAGCGCTGC
GCATTACACAGAAACTGCCATTGATGAGATGAAGCTGTTGATTAAGGTGC
GTGAGGCGGATCCAGATCATTTAGGGTGTAAACACGTGGTGCAATTGTTG
GATGATTTCAAAGTCAGTGGAATACACGGGAACCATATTTGCATGGTATT
TGAAGTTTTGGGGCACAACCTACTGAAATTCATCATCAAATCAAGCTACC
ATGGTATCTCCATCCCTATGGCTAAAAGTATTATCAGACAGACGTTGGCC
GGTTTGGATTATCTTCACACCAAATGTAATATTATTCACACTGATGTCAA
GCCAGAAAATATATTAGTTTGTATAACGGAAGACGAAATACAAAAATTAG
CGGTGGACGCCACTTTAGCGTCGCAGAAAGGAAAACTCTCAAAATCGCAA
ACTGCGACCGCTCCCAAACATATTGTACAAAAGCAAACAGACAGTTCaat
gaaaatgtccaaaaataaaaagaaaaaaatgaaacaaaaactgaaaaaac
aattacaaaaacATCAGAATGAAGTTGATGAGCACGACGAAACTAGTGAA
AAACCTCCCGAAGATGCCACAATTACGAATGCTTCAGAAACGAGTACTAC
AACTAACGagaatgatgaaaataataGAACTTCTCCGGTTGCCATGGATA
TTTCTTCCTCTAATAATAATCTTCATGACGATGGTGGCGATAAGTCAAAA
CTTGAGAAATCGAACAGCGTTGAAATGTCTGAGGAGCCTTTGACGAGTGA
GAAAGAGGAGGACAGGGGAGAAAGCTCACATACAACTGAGGACGATTCAT
CAACGACACTCGTACCCTCTACCAACTCTTTCGAACCTCCCGTCTTTGCG
AACGGTGACATCTGTATGAGTAGTGTCGATCGAAAGGATACATCAAAATC
ACCAGTCCACCATAACATGGACACTGATAActcacaacaacaacagcaac
aaccaACCTCGACGTCACCTGTACCAACGAAATCGAAATCTCCTTCACCA
ATCCAAATAGAAGTCAAAGAAGTAGAGAAGACAGATAAGCCAGTCGCCAA
TGGGACAACATCAGTAGAAGACGAACTGGTTTCCAGGTTGAAATTGGATA
GCAGTGCATCGACTGATCAGAAAGATCAATCTCCATTCTCCCTTGATAAC
CCTGAGATCACCGTCAAAATTGCTGATCTTGGAAATGCTTGTTGGACGAA
CCACCATTTTACAGAGGAAATCCAAACTCGACAATATCGAAGTTTAGAAG
TTCTGTTAGGTGCTGGGTATGGCACTCCTGCTGATATATGGAGCACAGCT
TGCATGGCGTTCGAATTGGTGACAGGAGACTTCTTGTTCGAACCTCATTC
CAGTGAAGAATATAGTCGAGACGAAGATCACATTGCCCTGATTATGGAGA
CACTTGGTCGAGTACCCAAACATATCGCACTAAACGGGAAATTTTCTAAA
GAATTTTTTACCCGGAAAGGAGAGCTGAGACATATCAAAAAGCTGAAACC
ATGGTCTTTAACTGACGTCATGATGCAAAAATATGATTGGTCGCGAAAAG
ATGCGGAAGAGTTGGCCGGTTTCTTGACGCCGATGTTGGATTACGTTCCA
GAGAAGCGTGTGACGGCTGCCGAATGTCTGAAACATCCATGGTTACAAGA
AAAGGGCGAAAGTTTTTCGGAACCAGTTCCTGCAGATGTAGATGTTGAAT
TGAACGCACCTTCTCCTCTACTAAAAGAAACAGAGACTTTGAACGTTGAA
GAAATACCCGGCCACGTTGAGGAATCGGCTGGTAGTTCGGCTGGTAGTAA
AAGTGAGTAGTGAATTTGTTACCATTGGTTTTGGTTGGTCGAGAGTTGAT
GAACGTTGAacgtttttgaagaaattgttcCTGTGATGATGTGACTTTTG
TGAGAACGTTTAATCGGACATTtcgaaaagtgaagaaaaacaaGAGACTG
ATTGTTAAACAAACTGGTGTATTGAAACAATATGTTCTAACAAACTTTGT
AAAATGGAAAAAGattgtatttcattttctattgGCTTGTACGTtcttta
aaattccttagcttTCTCCCTGATCATTTTTTGATACATGAACCTGCTTT
TTAACGTTCACTATTTTACAAACACCGAACTGAGTGACAAGATACTCGTA
AATTTCCGCTTACAATGAGAAACCATCAAGTAATTCAGATGAATTGATTA
CAATTAATTCGATGAAGCAATTTAAATTTAATGTTAGTGAATATACTGTA
GGACTATTTGTTCATCCCTTTTGTATCTAACATTTACCGGTATCGATATA
GAAGGTGTATTTTAGTTTAAAACACCAGAGggaacttttaaaagatttta
acataGTTGAAGATTTAGATATATTTAAAACACGAGGTATGTCCAATGGT
TATCATGAATAGACAATTGTAGTGTAACTTCAATATGAAAAAGatacatg
tttttatttcaaaacgaAAAATCTGAATCTGATCTCTT

Run BLAST on NCBI

protein sequence of TCONS_00067581-protein

>TCONS_00067581-protein ID=TCONS_00067581-protein|Name=TCONS_00067581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=802bp
LPTIILLVLFFSKIRDIFISLMVQLLGKNFINRRRQAIRAVVKACLPEFL
NKVFLRVLGLVTLEGAPEAIDNKPHNSKYKRRKNGEKSSSKHRNKKRKKK
SSSSKKSNHHGSRKEDEVDGKGRSLSENEESPVEDTDDEEQEDVSDYCTG
GYHVVNIGDLFQGRYHVIRKLGWGHFSTVWLAWDLTEKKFVALKIVKSAA
HYTETAIDEMKLLIKVREADPDHLGCKHVVQLLDDFKVSGIHGNHICMVF
EVLGHNLLKFIIKSSYHGISIPMAKSIIRQTLAGLDYLHTKCNIIHTDVK
PENILVCITEDEIQKLAVDATLASQKGKLSKSQTATAPKHIVQKQTDSSM
KMSKNKKKKMKQKLKKQLQKHQNEVDEHDETSEKPPEDATITNASETSTT
TNENDENNRTSPVAMDISSSNNNLHDDGGDKSKLEKSNSVEMSEEPLTSE
KEEDRGESSHTTEDDSSTTLVPSTNSFEPPVFANGDICMSSVDRKDTSKS
PVHHNMDTDNSQQQQQQPTSTSPVPTKSKSPSPIQIEVKEVEKTDKPVAN
GTTSVEDELVSRLKLDSSASTDQKDQSPFSLDNPEITVKIADLGNACWTN
HHFTEEIQTRQYRSLEVLLGAGYGTPADIWSTACMAFELVTGDFLFEPHS
SEEYSRDEDHIALIMETLGRVPKHIALNGKFSKEFFTRKGELRHIKKLKP
WSLTDVMMQKYDWSRKDAEELAGFLTPMLDYVPEKRVTAAECLKHPWLQE
KGESFSEPVPADVDVELNAPSPLLKETETLNVEEIPGHVEESAGSSAGSK
SE

Run BLAST on NCBI

transcript from alignment at scaffold_471:437667..447315+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00067581 ID=TCONS_00067581|Name=TCONS_00067581|organism=Clytia hemisphaerica|type=transcript|length=9649bp|location=Sequence derived from alignment at scaffold_471:437667..447315+ (Clytia hemisphaerica)
CTTACCAACTATCATTCTGCTGGTCctttttttcagcaaaataagagaca
ttTTCATATCTTTGATGGTTCAGTTATTGggtaaaaactttataaatcgA
CGTCGGCAGGCCATCAGAGCGGTTGTCAAAGCATGCCTGCCAGAATTTCT
GAACAAAGTTNGTCGGCAGGCCATCAGAGCGGTTGTCAAAGCATGTCTGC
CAGAATTTCTGAACAAAGTTTTCCTGCGCGTGCTGGGATTGGTGACTTTG
GAAGGTGCACCTGAAGCGATCGACAACAAACCACACAACAGTAAATACAA
GAGGAGGAAGAATGGAGAGAAATCTTCCTCCAAACATCGcaacaaaaaac
gaaaaaagaaaaggTACTAACCACTCTGCCCACCCAGCTGATatacacaa
cattgtttcaacgttaaacTAAttttcacaacgtccatataacgttggat
gaacgtttaaacaacgttgtatgccagCTGGACAATAATAAGCTCTGTAC
GGTTGCTTATGGTCAATGAAAATTCCTTGTGTGTGCTTTTCCAGGGAACT
TAACATTTCTTTAAAGCTGCTTTTTTATGATAGGTTCTTTGTTTACAACA
GGCGACAGGAATTTGATGTGCGTCTCTTTTTGGTCTGAACTGTTAAATGA
AATGTGGGGTGTTAACGGTATTATTGACGGTGATTCGTTGCAACGAGATT
AACGCATTTTTTAGCTTGAATGCAAATGCATTGGTCATAATGTTTTCTTT
GTCAATGAAAACTTTTGTCACTTCTCTTTTCGCGAAAATTGTTGTATAGA
TAAAAACACGCGTGACATTTCTTAAAAAgggtttgtttttgaaaaatgta
agtTTGTCAGATACCACCCCTCTCCTCCCTTAACTGTCATCTATAAATAG
GTCGCTATCAATAATTAACTCGAAAGATaacattcacaatttttttcttg
ctttcgTTCAGGACCCTTTGGGGTGTCGTAAGATTTTCGCCCTTAAAAAC
GTCAACCCCCTAGTGGTGATTTACGTAAATACTTATTGAAGCTTTCGTtc
tatttgaaaaataagttttagcAGGTTTGTTATAGGTGGTGTTTTTTAAG
CCTTGTATTTGTTTCAGatctttttacagaaaaaaaccTTTCAATTTTCT
TCCAACTTTTGAAGTTGTTTTCACCCTACTAATTGTAAGGTACATTTGGC
CCATGCATCATTTATTGCAAGATCTTTCATCTTCGTTTCAAAATGCGAAA
CTTAAggatttttgatttcattttgaaattactttttgattttcaaattt
tgaggaGCCAGGAAGAATAAGCTCAAAAATAACATACAAAACACGTTTTT
ATTTCTTGTCAAACTTCAATATTCCGTcatgtttttttatgttttaaaat
acTGCTTGGTCCCATTTTTAAAGAATCAAGCTAAAACTATTTTCAGTGCT
CTATAAATAATTAATAAGGGACTGGATTGATCTCTTGTCTTCAATAGTAA
ACGGTTTGTTGTTAAAAGAAAACCAGTTTCAGTTTTGTGAAGAAAGCATC
TCGCGCCTTCTTCTCTCTTATTCTTGATCCATCGACTTTCTGAGCCTCCA
TCGTGGATATTTTcgcaagattttttaaaacacGATTTGTTTGCTACGAG
ATTATGTTTGCTTTTTGAATGGTTTTAACGCAAGACACGATATGCGATTG
ACGAAATCGACTCATGTGTTTTCCTCTTGCTTTCCGGTGGGCAATAAACC
GCTGCTGAACCAAGCGCCGTCCTCGCTTAAAACCTCAAACATCCCCTCCT
CGCCACATCAGTTGATTGGTTTGTTGGGCAAGGCAAGGAATAACAGCGAT
TTGAACAAAATCCTTTGCTCATACACCCGTGGAAGGTTTCCTATAAAGCA
GATTTTTATTCCTAAAtccaagaaaaaaaatatgtaagtATACTCAAGGA
GCTTTCttttttccccaatttttgGACATTTATCTTCCAATTTTTGAACC
ATGTTTTGGAATTCTGTTTGTTAGCCTTTAGTAGGTGCGATAATGGACAC
GCTATCACTTCGCTCCCATCTTTTCCCTTCTCTTTAAACTATCGTTAATA
TTTTGAAACTATTGGTCAGAGTGTTATTTTTCCTCTTCCTCCGATCCTTA
TCttcaatttccttttttcattgTTGTGACATTCGATCGCTATGCCTTTC
GGGTATGACTGAGGGTTATTGTTGGTTGAGTTTTTCGAAAGAAGATTTTC
ATAGATAATTTATTGCTTTTCTTCGAAAAGCTTTCACATCTAGATGTCTG
AGAGGTGATAAATTTTCGAGGGAAATCGAAACTGTGAAACAGAGAGTATA
TTTCCAAAAGTTTTCTTAACATCGAGGAAAGCAAACAAATTTTTTAATGT
ACTCTCAACAAATTTGGAGGGGCGCTGTGAAGGATATGAATGATTCATAT
GTCTCCAACATACACTCTTCAATAAGAGAAAACTAGTGGACTGTTCTTCT
ATTCATCTCTTGTTTTTACCCATGATTGAGAAGTGAATTAAATGATTTGT
CCAAGTACTTTATCTATTTCATTcccttttttacaaaagaagCAATGATC
GCCCACTCCTTTTACTAAATCAATTTTAATGTCCTTCTTTAAGTAAAGTT
GATTTCAAGAGTATTTTACTTATGTTTTTCAACCTTCACTATCGTATTGT
CGTTCACCCATATGAATCTAAAATCGGGCTTCACGATACCCCGTTGCCCT
ATTAAAGCGATTCTTGGCTTACATTgaagtttcaatatttttcttgacTT
AGCCagaagttatttttgaatttccgTTTAATGTGTTTTTTCCTAAAGTA
AAGCGTTTAACCCTTCAAGACCATCAACGATAAGGTGATGTCACGATTTA
AATTAACGATGGAATTCGTGTGTATGTAGTACTAAAGTAATAATCGAACT
CGAACTCTcccaaagagaaaaaaattgtcgGTGATCACCCTCTTTCAAAT
TAGTGAGATAGACCGGTCCTGGTCAGTTTAGAAAATGTTCTTACTGTTCC
AAAAACCATATAAATGCAATTTTCCCCAAAAACCATTTAAATGCAATTTT
TCTTCTAAACCTATTTCATATCATTGAGATTTTAAAAAAGATGTTAGTTT
GTACATTTAGTCTAGTGTAGACCTCACAATCATCCACGTTGCGAAAACAG
TAATAGCGCAATATTTTCTTAGCCTAACATTGTAAAAAGAACTTGACCAT
GAATACCGTCTTCTaggttcaattttttttgccaaaataaataAGGTCCT
TAAATAATAGCGCCCGATTGTGAAAAATTAAGTGCATTTCAGTTATTTTT
GATCGTCACTTCAGATGTGGCCAATGAAATAGCTtctatattttgataat
ttcttttttattattttgcaaTCTAGTTCATCTTCCAAANGCTtctatat
tttgataatttcttttttattattttgccATCTAGTTCATCATCCAAGAA
GAGCAACCATCACGGATCGCGCAAAGAAGATGAAGTCGATGGCAAAGGCC
GGTCGTTGAGTGAAAACGAAGAATCACCGGTCGAAGATACGGATGATGAA
GAACAAGAGGACGTCTCTGATTATTGCACTGGTAACATGATTACCCTATT
TTTTAAGTTATTCTAAAATGCTAggtatcgaaagaggagcctctAATTAA
TTGACCTTTTCTTGCAGGTTGTGGGGGTGGTTGCTAGGGTACATGGCATC
TCTTGGTCGGGCAACCAGATCACACTTACTTAAAGTACTAAATCGGACTA
TTTTTCACGCGTTACGTTTGGTTGATTCAAAGTTTGTAAGTAACATCAAC
ATGGGGAAAAAGAGAAGACTATTTTTGCATAACGTTTTTTTTGAGGCACG
TTTTAATTTGGACTTCAAAATAGGGATACAGCCACACGGCTTCTTTGTGC
ACACTGACTTTTGTTCTTGATTCTTCATTAGGTGGTTACCATGTGGTCAA
CATCGGTGATCTCTTCCAAGGGAGATATCATGTCATACGAAAACTTGGAT
GGGGTCATTTCTCCACTGTCTGGCTAGCATGGGATCTCACGTATGTTGCT
TCTTTTATTAATGTTCATATTCATTTGTTCAATCTTAATACTGTACATAC
CAAAGTTTTGCTGCGTTCTACTATTGTATTATCTTTTACCCATAGTATAT
ACTCTCTGCCTTCACTTATATATCAATCTTTCAATCTGGCTGATAATAGA
CGTATCGATTGGTGTCGAATGAGCTTAGTAAAGtacaaattgcagatgta
gaacgataaacccGGTATGCACCTACCCATATACTTTATGAATCATCTTT
TTCACTTGTCTTTTTGCAGAGAGAAGAAGTTTGTGGCGTTGAAGATTGTG
AAAAGCGCTGCGCATTACACAGAAACTGCCATTGATGAGATGAAGCTGTT
GATTAAGGTATAGTGCAGAAAATGTGTTGTGATTGTAATTCATTCAAAGT
ACAGCTAATTTAGCTCACTGCAGTCTTTAGTAAGATACTTAATTTTGaat
gcacgcttttttataagaaccagtaaattttggctcaggctgggctgttc
ttaatttttagaaatttccaGGCTTatatgttcttacgatgttcttaata
cgcttagttgctttatttaaaaacttaaaatgggtttaaaatcttctaAA
ATCAGCATTTTCTTAGTGATTTCTGAAATcggaggctcagattgttctta
atttgttcaaaggttttggccaattttcagcctccTGCTCctataatgtt
cttataaaacaaaagagCGTGTATTTCATCAAATTCGCATTATTAATGGC
TTCATTTTTTCAGGTGCGTGAGGCGGATCCAGATCATTTAGGGTGTAAAC
ACGTGGTGCAATTGTTGGATGATTTCAAAGTCAGTGGAATACACGGGAAC
CGTATCTTTTCATCCACAACTTCTTTATAGTGTTGTTTAAGGAATTAATT
TGGGATCGTGATaatgtgtcccaaaaaaagcggacaaatttttatttaat
gtaAAATCTTGGAAATGGaatatctattgctttatcagaTAATTgtaatc
ttatttcaattattctaagTCCAGTTTGAGGATTAAATTTTATGTGTAAA
CTCGTGTGCTTGAGACACAATGTATATTTTTAAAGCTTTAGTGTCATGCG
ATCTAAATGATTTGCAGTGGTTTAGCCCCCTAGCACTACGCACCTTTCCT
TAACTGACATGAATGATTTCAGATATTTGCATGGTATTTGAAGTTTTGGG
GCACAACCTACTGAAATTCATCATCAAATCAAGCTACCATGGTATCTCCA
TCCCTATGGCTAAAAGTATTATCAGACAGGTATACCCGCGCCTCGTTTTC
AAAAGGTCATCTCTCTTCCTAGTGATTATGATTCTTGTAAAATTTCCTTC
CTTATCGAGGGTGTTATTGGGTAAAGGGCAGGGTATACTATTGAAATGTA
TCAGAGGGCGTGGATGTAGATGGTAGGGGCAGTGGACAAGGAATGATCGG
TGTAGCAGACGTGGACCTAATGCAATTACGATATAAGACCAAAAATTTGG
AGGAGGCTGAAAGGCCTGGTAAAGTAGATTCTTGATAAGGTATTCTGTTA
TGCTTTATATATGAATGTTCATTAATTATGGAAGTATCTTGAAAGTATAA
TATTTCCATGTCCGAATACGTTTCTTTTTGCCTCAATTTAGACGTTGGCC
GGTTTGGATTATCTTCACACCAAATGTAATATTATTCACACTGATGTCAA
GCCAGAAAATATATTAGTTTGTATAACGGAAGACGAAATACAAAAATTAG
CGGTGGACGCCACTTTAGCGTCGCAGAAAGGAAAACTCTCAAAATCGCAA
ACTGCGACCGCTCCCAAACATATTGTACAAAAGCAAACAGACAGTTCaat
gaaaatgtccaaaaataaaaagaaaaaaatgaaacaaaaactgaaaaaac
aattacaaaaacATCAGAATGAAGTTGATGAGCACGACGAAACTAGTGAA
AAACCTCCCGAAGATGCCACAATTACGAATGCTTCAGAAACGAGTACTAC
AACTAACGagaatgatgaaaataataGAACTTCTCCGGTTGCCATGGATA
TTTCTTCCTCTAATAATAATCTTCATGACGATGGTGGCGATAAGTCAAAA
CTTGAGAAATCGAACAGCGTTGAAATGTCTGAGGAGCCTTTGACGAGTGA
GAAAGAGGAGGACAGGGGAGAAAGCTCACATACAACTGAGGACGATTCAT
CAACGACACTCGTACCCTCTACCAACTCTTTCGAACCTCCCGTCTTTGCG
AACGGTGACATCTGTATGAGTAGTGTCGATCGAAAGGATACATCAAAATC
ACCAGTCCACCATAACATGGACACTGATAActcacaacaacaacagcaac
aaccaACCTCGACGTCACCTGTACCAACGAAATCGAAATCTCCTTCACCA
ATCCAAATAGAAGTCAAAGAAGTAGAGAAGACAGATAAGCCAGTCGCCAA
TGGTGAGTTCACGAAACCTcagttattttttcattcaaattcattAACAC
TTTGATGGATTTGTCGTTTAAACCAATATTTTTTTGCCACATAATGTTTA
TACCTCCTATTTCTCTGGAATCTATCTTTTAGGATTTGATTCAAGGATTT
TTCACATGCAATTTCGTTTGTTTCTAAGTTCTTAAAATAGAACTTGATTG
TTTAATTGTATCTTGTCTCTAGGGACAACATCAGTAGAAGACGAACTGGT
TTCCAGGTTGAAATTGGATAGCAGTGCATCGACTGATCAGAAAGATCAAT
CTCCATTCTCCCTTGATAACCCTGAGATCACCGTCAAAATTGCTGATCTT
GGAAATGCTTGTTGGACGGTAAATTCTTTCATTCTCGTgatcatttttta
tcatttccgTGAAGCAATGGCATGTAATACAACATTTATGTGATGTTGAT
CAAGCTCTTCCCTTGTGTGATCTTTTTTCCGTTCTCTTATCTGACTTTCC
AAACGAAACAATGGCATTCCATCATTGACATATTCAATTTACCCTTCACT
TTTAGAACCACCATTTTACAGAGGAAATCCAAACTCGACAATATCGAAGT
TTAGAAGTTCTGTTAGGTGCTGGGTATGGCACTCCTGCTGATATATGGAG
CACAGCTTGCATGGTATGACTATAACTCCAACCTGATGGTCGGAAAAATT
TAAACTTATATAATTGCTTTATTGAACAACGAGTTAAGTTTACTTGCAGA
TTTTTCCTACTTGATAATCTTGattcaaatatttgaaaataacgGCGCTA
TTTACgttcataactttttataacACTTTTCCTTTCAGGCGTTCGAATTG
GTGACAGGAGACTTCTTGTTCGAACCTCATTCCAGTGAAGAATATAGTCG
AGACGAAGGTAATTCTAAATATGTTTTTTGAAAGCATGCACGGCTCAAAT
CTCGTAAAATTTCAATTGTTGCCATGACCGAGTCTTTATAAtatcacaaa
aaaaaagttattgaacTTTGGAATGTACCCAATTTTGATATCCTGAAATT
ATTTCTCGTTGTGGAAAATTGTGCTATCTCTGCTGTCCTCTTTTCCCAGC
ACGTATTGCTGTCATTTCTATAACTTCCATACAataatcttttgattgaa
ttaaAAATGATGATTCGATTTCTCTTTATTTCTAGATCACATTGCCCTGA
TTATGGAGACACTTGGTCGAGTACCCAAACATATCGCACTAAACGGGAAA
TTTTCTAAAGAATTTTTTACCCGGAAAGGTATTGAAACTCACGAATCAGA
AATTTCACTTTTACATTAAACCCTTTCGCGTGTAGCATGTCACCTgatgt
atacacgtttttttattttttaagaaacacacttttaagaaacatgaggc
tcagaatgcctaaaaactaggaaacatctaagaaactaagaaacatgctg
agtctcagaatgagaaaataacatttttaactaatgtttttttttctttg
catgaaaaataagctgattatgtcaaaatgtttagaaacatttcttaaga
aacatctaGGCTACTtcgtaaaactagtttcttaaaaagaaaaacgtgta
ctaaCATAATATGTAAACTCAAAAAATATCAACCTCGTTCCCGGGTATCC
CTGGCTTTATTTACGATACTGTGATACTGATTTCATGTTCCTTTTCACGC
TTGATAGGCTAGTGACCCACATATTTCCCGTGAAATTtgcttttgatttg
attttgcgTATTTGCTTTTggattacgtaatcttacgcgttcCAAAACCA
GACAATGCTAGGGTACTAAAAAACTgataaacataaaaaaactgaaagta
CGTAAAAGGTACGAGGCTAGAAAAAGTTCattaaaccaatttttttttgt
gtttcgtTTTATTCAGGAGAGCTGAGACATATCAAAAAGCTGAAACCATG
GTAAGCTCTCATCTTTCCCTTTTGGCGATCGATGATTATGCTTTAGAAAT
TACTTTGACAGACTGTTATAGTCATTTTAGACAGGGTCTGAATTTTTGGA
GATAGTGATCATAGTATCAAATTCTTGTTGTAAATCTGCTTAACATGTAA
TATGCTTCTTTCAGGTCTTTAACTGACGTCATGATGCAAAAATATGATTG
GTCGCGAAAAGATGCGGAAGAGTTGGCCGGTTTCTTGACGCCGATGTTGG
ATTACGTTCCAGAGAAGCGTGTGACGGCTGCCGAATGTCTGAAACATCCA
TGGTTACAAGAAAAGGGCGAAAGTTTTTCGGAACCAGTTCCTGCAGATGT
AGATGTTGAATTGAACGCACCTTCTCCTCTACTAAAAGAAACAGAGACTT
TGAACGTTGAAGAAATACCCGGCCACGTTGAGGAATCGGCTGGTAGTTCG
GCTGGTAGTAAAAGTGAGTAGTGAATTTGTTACCATTGGTTTTGGTTGGT
CGAGAGTTGATGAACGTTGAacgtttttgaagaaattgttcCTGTGATGA
TGTGACTTTTGTGAGAACGTTTAATCGGACATTtcgaaaagtgaagaaaa
acaaGAGACTGATTGTTAAACAAACTGGTGTATTGAAACAATATGTTCTA
ACAAACTTTGTAAAATGGAAAAAGattgtatttcattttctattgGCTTG
TACGTtctttaaaattccttagcttTCTCCCTGATCATTTTTTGATACAT
GAACCTGCTTTTTAACGTTCACTATTTTACAAACACCGAACTGAGTGACA
AGATACTCGTAAATTTCCGCTTACAATGAGAAACCATCAAGTAATTCAGA
TGAATTGATTACAATTAATTCGATGAAGCAATTTAAATTTAATGTTAGTG
AATATACTGTAGGACTATTTGTTCATCCCTTTTGTATCTAACATTTACCG
GTATCGATATAGAAGGTGTATTTTAGTTTAAAACACCAGAGggaactttt
aaaagattttaacataGTTGAAGATTTAGATATATTTAAAACACGAGGTA
TGTCCAATGGTTATCATGAATAGACAATTGTAGTGTAACTTCAATATGAA
AAAGatacatgtttttatttcaaaacgaAAAATCTGAATCTGATCTCTT

Coding sequence (CDS) from alignment at scaffold_471:437667..447315+

>TCONS_00067581 ID=TCONS_00067581|Name=TCONS_00067581|organism=Clytia hemisphaerica|type=CDS|length=2409bp|location=Sequence derived from alignment at scaffold_471:437667..447315+ (Clytia hemisphaerica)
TTACCAACTATCATTCTGCTGGTCctttttttcagcaaaataagagacat
tTTCATATCTTTGATGGTTCAGTTATTGggtaaaaactttataaatcgAC
GTCGGCAGGCCATCAGAGCGGTTGTCAAAGCATGTCTGCCAGAATTTCTG
AACAAAGTTTTCCTGCGCGTGCTGGGATTGGTGACTTTGGAAGGTGCACC
TGAAGCGATCGACAACAAACCACACAACAGTAAATACAAGAGGAGGAAGA
ATGGAGAGAAATCTTCCTCCAAACATCGcaacaaaaaacgaaaaaagaaa
agTTCATCATCCAAGAAGAGCAACCATCACGGATCGCGCAAAGAAGATGA
AGTCGATGGCAAAGGCCGGTCGTTGAGTGAAAACGAAGAATCACCGGTCG
AAGATACGGATGATGAAGAACAAGAGGACGTCTCTGATTATTGCACTGGT
GGTTACCATGTGGTCAACATCGGTGATCTCTTCCAAGGGAGATATCATGT
CATACGAAAACTTGGATGGGGTCATTTCTCCACTGTCTGGCTAGCATGGG
ATCTCACAGAGAAGAAGTTTGTGGCGTTGAAGATTGTGAAAAGCGCTGCG
CATTACACAGAAACTGCCATTGATGAGATGAAGCTGTTGATTAAGGTGCG
TGAGGCGGATCCAGATCATTTAGGGTGTAAACACGTGGTGCAATTGTTGG
ATGATTTCAAAGTCAGTGGAATACACGGGAACCATATTTGCATGGTATTT
GAAGTTTTGGGGCACAACCTACTGAAATTCATCATCAAATCAAGCTACCA
TGGTATCTCCATCCCTATGGCTAAAAGTATTATCAGACAGACGTTGGCCG
GTTTGGATTATCTTCACACCAAATGTAATATTATTCACACTGATGTCAAG
CCAGAAAATATATTAGTTTGTATAACGGAAGACGAAATACAAAAATTAGC
GGTGGACGCCACTTTAGCGTCGCAGAAAGGAAAACTCTCAAAATCGCAAA
CTGCGACCGCTCCCAAACATATTGTACAAAAGCAAACAGACAGTTCaatg
aaaatgtccaaaaataaaaagaaaaaaatgaaacaaaaactgaaaaaaca
attacaaaaacATCAGAATGAAGTTGATGAGCACGACGAAACTAGTGAAA
AACCTCCCGAAGATGCCACAATTACGAATGCTTCAGAAACGAGTACTACA
ACTAACGagaatgatgaaaataataGAACTTCTCCGGTTGCCATGGATAT
TTCTTCCTCTAATAATAATCTTCATGACGATGGTGGCGATAAGTCAAAAC
TTGAGAAATCGAACAGCGTTGAAATGTCTGAGGAGCCTTTGACGAGTGAG
AAAGAGGAGGACAGGGGAGAAAGCTCACATACAACTGAGGACGATTCATC
AACGACACTCGTACCCTCTACCAACTCTTTCGAACCTCCCGTCTTTGCGA
ACGGTGACATCTGTATGAGTAGTGTCGATCGAAAGGATACATCAAAATCA
CCAGTCCACCATAACATGGACACTGATAActcacaacaacaacagcaaca
accaACCTCGACGTCACCTGTACCAACGAAATCGAAATCTCCTTCACCAA
TCCAAATAGAAGTCAAAGAAGTAGAGAAGACAGATAAGCCAGTCGCCAAT
GGGACAACATCAGTAGAAGACGAACTGGTTTCCAGGTTGAAATTGGATAG
CAGTGCATCGACTGATCAGAAAGATCAATCTCCATTCTCCCTTGATAACC
CTGAGATCACCGTCAAAATTGCTGATCTTGGAAATGCTTGTTGGACGAAC
CACCATTTTACAGAGGAAATCCAAACTCGACAATATCGAAGTTTAGAAGT
TCTGTTAGGTGCTGGGTATGGCACTCCTGCTGATATATGGAGCACAGCTT
GCATGGCGTTCGAATTGGTGACAGGAGACTTCTTGTTCGAACCTCATTCC
AGTGAAGAATATAGTCGAGACGAAGATCACATTGCCCTGATTATGGAGAC
ACTTGGTCGAGTACCCAAACATATCGCACTAAACGGGAAATTTTCTAAAG
AATTTTTTACCCGGAAAGGAGAGCTGAGACATATCAAAAAGCTGAAACCA
TGGTCTTTAACTGACGTCATGATGCAAAAATATGATTGGTCGCGAAAAGA
TGCGGAAGAGTTGGCCGGTTTCTTGACGCCGATGTTGGATTACGTTCCAG
AGAAGCGTGTGACGGCTGCCGAATGTCTGAAACATCCATGGTTACAAGAA
AAGGGCGAAAGTTTTTCGGAACCAGTTCCTGCAGATGTAGATGTTGAATT
GAACGCACCTTCTCCTCTACTAAAAGAAACAGAGACTTTGAACGTTGAAG
AAATACCCGGCCACGTTGAGGAATCGGCTGGTAGTTCGGCTGGTAGTAAA
AGTGAGTAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042201	XLOC_042201	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00067581-protein	TCONS_00067581-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_471	supercontig	scaffold_471:437667..447315 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.03491	0.362686	1.19744	0.720825	47.7524	30.3129	32.6101	45.0092	21.1033	29.4399	20.8736	12.1748	34.6786	32.9059	21.8558	27.9501	28.7176	50.3433	23.0417	32.9794	26.0469	26.8334	25.8519	27.226	37.9332	40.728	89.0022	72.1719	5.64821	4.03014

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000719	Prot_kinase_dom
IPR017441	Protein_kinase_ATP_BS
IPR008271	Ser/Thr_kinase_AS
IPR011009	Kinase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Blast

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BLAST of TCONS_00067581 vs. Swiss-Prot (Human)
Match: SRPK1 (SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 1.500e-81
Identity = 128/197 (64.97%), Postives = 158/197 (80.20%), Query Frame = 2

Query:  434 SDYCTGGYHVVNIGDLFQGRYHVIRKLGWGHFSTVWLAWDLTEKKFVALKIVKSAAHYTETAIDEMKLLIKVREADPDHLGCKHVVQLLDDFKVSGIHGNHICMVFEVLGHNLLKFIIKSSYHGISIPMAKSIIRQTLAGLDYLHTKCNIIHTDVKPENILVCITEDEIQKLAVDATLASQKGK--LSKSQTATAPK 1018
            +DYC GGYH+V IGDLF GRYHVIRKLGWGHFSTVWL+WD+  KKFVA+K+VKSA HYTETA+DE++LL  VR +DP+    + VVQLLDDFK+SG++G HICMVFEVLGH+LLK+IIKS+Y G+ +P  K II+Q L GLDYLHTKC IIHTD+KPENIL+ + E  I++LA +AT   + G    S S  +TAP+
Sbjct:   60 NDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQ 256

HSP 2 Score: 270.396 bits (690), Expect = 8.585e-78
Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 2

Query: 1730 SPFSLDNPE-ITVKIADLGNACWTNHHFTEEIQTRQYRSLEVLLGAGYGTPADIWSTACMAFELVTGDFLFEPHSSEEYSRDEDHIALIMETLGRVPKHIALNGKFSKEFFTRKGELRHIKKLKPWSLTDVMMQKYDWSRKDAEELAGFLTPMLDYVPEKRVTAAECLKHPWL 2245
            +P    N E + VKIADLGNACW + HFTE+IQTRQYRSLEVL+G+GY TPADIWSTACMAFEL TGD+LFEPHS EEY+RDEDHIALI+E LG+VP+ + + GK+SKEFFT+KG+L+HI KLKPW L +V+++KY+WS+++A     FL PML+ +PEKR TAAECL+HPWL
Sbjct:  481 NPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 653

The following BLAST results are available for this feature:

BLAST of TCONS_00067581 vs. Swiss-Prot (Human)

BLAST of TCONS_00067581 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SRPK1	1.500e-81	64.97	SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=...	[more]

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TCONS_00067581 (transcript) - C. hemisphaerica