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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067658 ID=TCONS_00067658|Name=TCONS_00067658|organism=Clytia hemisphaerica|type=transcript|length=1889bp
tgaaaatggccaaaaaattaagaatatggtaagaatatcaccatcatgga
atgaTGATTTAACCTGTAGATTGCCAATTTCGATCTTAACCtaagaatac
cgtaagaatatttttggatgattttcgccaaaaagttaagaatatccatg
atgaaatgaaaaaacaccattcttataaaaaaaagcgtgtatactgAGAA
ATTTTCTGGTTGTATCATATTAGAATTTAATCAGTGAAATAAAGTCCACT
TTTATTGCTTTTTAAGCTATATTGGAATCAATGCTTTCACCAAGTAAAGA
TGTGAAAAACGTAATATGTGAAGATTGTTTGCAGATTGCAGTACAGTTGA
ATAAGATTGAGATAGTAAATCTGGTTTGCCGAGAAGCACCGAATAACATG
ATGCACTGTGCTTCAAAGGCTTTGGATTATGGTCATCATGAAATTGCTTT
ACTACTTTTGTCTTACACGGCTACCATCCACAACAATCATGAATTTTTAG
AATTGTTATTCGGAAGAGAACCAGCAGTAGAAGAGAGTGATTGTTTTCAT
CAATATTACTCGTTGACATTAACATGGAGTGACATTGAAAAACTTAGGTG
TTACACGAAGAATGATAGTGTCAGCGGTATGGTCAAGAATTTGATGTTCA
AATGCTCAGGCGTTAAGACAAAACTTGgtcaaaaatgtttgaaagtGATA
CTGTTaagtaaaaaatattgctgcGATTCCAGAAATAAAGTGAATTGGGA
ACAATTGGGTCTGACACATCTAGAGGAATCTTATATCAATGACATTGCAA
ATTATCATAAACTCTCTTTAGTTGATAATCTAATTTCACATTTGCCATGG
AATTTGGAAGTTTTAGTTAACCTGACACATTTGGATCTTAGTCAAAATAA
AGTCCAAGAAATCCCTGTCACGTTGCTTCAATTACCATGTTTGAGAACAT
TAAATCTCTCTTGTATTCTGATCGAGAGTTTGCCTCAAACAAACAAATGG
TCACCATTGCTTAAAGCGTTATCTCTTTCTGGAAACTTATTAACATCTTT
GCCGAGCAAAATCGATTCAAAGATCACATACTTAAGTATTGCAAACAACA
AATTCAAAGAGTTCCCGATGGTGATATGTAATATGAAAACTCTGGAAACA
TTGGACATAACAGGAAATAAGGATATTAAAAAATTGCCTATACAGCTAGG
ATACAAcacaaatttgaaagaaatctaTTGGGAGGGTTTAAATgTTCGTG
ATATACCCATTCGTGTTCATCAATCTAGGGAAACTTTGCTTTCACACATG
CGCAGTAAAGCATTTCAAGCGGAACCTCATTACACAATGAAAATTGCTGT
CCTCGGCCAAGCCAATCATGGAAAAACTACACTGATTCGTAGATTATTGG
ATGTTAGTGGAGGAAATGATTCTCTTGGAGGAGaaaatgatATTGACGTT
CAAGAGCTGGTTTTGAGCGGTAGCAATTTCACAGACCCACGTTTTCACTT
CAACGTATGGGACTTCGCTGGAAAGGAAGAACTTTACGTTGCACACAAAT
GTTTTTTAACTGAGGATTCTTTGAACATACTGGTTTTTGATGTCACTGAA
GTCCAAAGTGGCGTCCGTGACATTGAGCCTTGGCTTGTCAACCTGGCATC
TTACATCTCAAAACCAAATGTTATCATCATTGGTACAAAGCTTGATCGTA
TCCCAAAGAAGTCATTTGAAAATGGATTCAAAGACTATATCGAAGGATAT
TTAAAAGAATTCATCAAGACATTTGAACCTAAGATGAGAAACGTGAATCT
ACACATCTTCGAAGTAATGTCACTTGAAGATCGCGAAGgtTATCCAGCGT
GTCCATAAAAAAACGGTAAATCCTCAGAATTCATTTTCC Run BLAST on NCBI transcript from alignment at scaffold_472:239685..248527+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067658 ID=TCONS_00067658|Name=TCONS_00067658|organism=Clytia hemisphaerica|type=transcript|length=8843bp|location=Sequence derived from alignment at scaffold_472:239685..248527+ (Clytia hemisphaerica)
tgaaaatggccaaaaaattaagaatatggtaagaatatcaccatcatgga
atgaTGATTTAACCTGTAGATTGCCAATTTCGATCTTAACCtaagaatac
cgtaagaatatttttggatgattttcgccaaaaagttaagaatatccatg
atgaaatgaaaaaacaccattcttataaaaaaaagcgtgtatactgAGAA
ATTTTCTGGTTGTATCATATTAGAATTTAATCAGTGAAATAAAGTCCACT
TTTATTGCTTTTTAAGCTATATTGGAATCAATGCTTTCACCAAGTAAAGA
TGTGAAAAACGTAATATGTGAAGATTGTTTGCAGATTGCAGTACAGTTGA
ATAAGATTGAGATAGTAAATCTGGTTTGCCGAGAAGCACCGAATAACATG
ATGCACTGTGCTTCAAAGGCTTTGGATTATGGTCATCATGAAATTGCTTT
ACTACTTTTGTCTTACACGGCTACCATCCACAACAATCATGAATTTTTAG
AATTGTTATTCGGAAGAGAACCAGCAGTAGAAGAGAGTGATTGTTTTCAT
CAATATTACTCGTTGACATTAACATGGAGTGACATTGAAAAACTTAGGTA
AGGGTTCCTATACCCCATTAATAACTCCATTATCTACGGTTCGTAATAAT
TATCATTATCTGTAGGCAAAAGCAGCCAtcgaataattcctgatatacta
CGGCTATTTTACCAAGGTAGATGGCcaaatcaaaatctttcaaattatcT
CGAATTAGGTAATGATAATGATCGAAGAGTAAACATTTTTGCATCTTTGC
GTGCCATTATTGTATTcgattgtttattttgattgatAGAGCCCACATAT
ATAAAACTAGGAACTAGTTTTTTCTGTTCAATTTTGTAAAACACTGTCTT
TCCCAAACCACGGGAGTTGaacaaaaacaatgataaaaaaaagtagaCCA
CAGTAAAAACCACAGTTCGGTGCTGACAATTTTGTCAATCAAACCAAAca
atagtctgaatcgcagaccgtTATAGATATACGTACTTCgtatattgggc
tcttccagaaaatgttcgtacacccCAGATGGAGGATATATTTTCCGGGG
GTagcgaaaattatcaaaatttgctttgtccgggggggggggtaaatttg
ctctgtccaaGTTGGGTTTTCTTCGTTTGTAACATAAAACAACAATGTTT
AAACAATATGTCGTGTAATTAAGTGATAGAAGATAAGTTTAAAATGATGT
CAGTTCACGAAATCAcgcaatttcttttttgtttctcacgaaatttctgt
tcacgcaaagttttccaattcacgcattcacgcagatttttaaaaatctt
cacgCATTTACGCAAGTAACTGGGGGCCCCTTTAAAGTGGCTCTGATAGT
AATAATTAAaatccttttcttcttttccttacGTAGGTGTTACACGAAGA
ATGATAGTGTCAGCGGTATGGTCAAGAATTTGATGTTCAAATGCTCAGGC
GTTAAGACAAAACTTGgtcaaaaatgtttgaaagtGATACTGTTaagtaa
aaaatattgctgcGATTCCAGAAATAAAGTGAATTGGGAACAATTGGGTC
TGACACATCTAGAGGAATCTTATATCAATGACATTGCAAATTATCATAAA
CTCTCTTTAGTTGATAATCTAATTTCACATTTGCCATGGAATTTGGAAGT
TTTAGTTAACCTGACACATTTGGATCTTAGTCAAAATAAAGTCCAAGAAA
TCCCTGTCACGTTGCTTCAATTACCATGTTTGAGAAGATTAAATCTCTCT
TGTAATCTGATCGAGAGTTTGCCTCAAACAAACAAATGGTCACCGTTGCT
TAGAGCGTTATCTCTTTCTGGAAACTTATTAACATCTTTGCCGAGCAAAA
TCGATTCAAAGATCACATACTTAAGTATTGCAAACAACAAATTCAAAGAG
TTCCCGATGGTGATATGTAATATGAAAACTCTGGAANccggggggggggg
taaatttgctctgtccaaGTTGGGTTTTCTTCGTTTGTAACATAAAACAA
CAATGTTTAAACAATATGTCGTGTAATTAAGTGATAGAAGATAAGTTTAA
AATGATGTCAGTTCACGAAATCAcgcaatttcttttttgtttctcacgaa
atttctgttcacgcaaagttttccaattcacgcattcacgcagattttta
aaaatcttcacgCATTTACGCAAGTAACTGGGGGCCCCTTTAAAGTGGCT
CTGATAGTAATAATTAAaatccttttcttcttttccttacGTAGGTGTTA
CACGAAGAATGATAGTGTCAGCGGTATGGTCAAGAATTTGATGTTCAAAT
GCTCAGGCGTTAAGACAAAACTTGgtcaaaaatgtttgaaagtGATACTG
TTaagtaaaaaatattgctgcGATTCCAGAAATAAAGTGAATTGGGAACA
ATTGGGTCTGACACATCTAGAGGAATCTTATATCAATGACATTGCAAATT
ATCATAAACTCTCTTTAGTTGATAATCTAATTTCACATTTGCCATGGAAT
TTGGAAGTTTTAGTTAACCTGACACATTTGGATCTTAGTCAAAATAAAGT
CCAAGAAATCCCTGTCACGTTGCTTCAATTACCATGTTTGAGAACATTAA
ATCTCTCTTGTATTCTGATCGAGAGTTTGCCTCAAACAAACAAATGGTCA
CCATTGCTTAAAGCGTTATCTCTTTCTGGAAACTTATTAACATCTTTGCC
GAGCAAAATCGATTCAAAGATCACATACTTAAGTATTGCAAACAACAAAT
TCAAAGAGTTCCCGATGGTGATATGTAATATGAAAACTCTGGAAACATTG
GACATAACAGGAAATAAGGATATTAAAAAATTGCCTATACAGCTAGGATA
CAAcacaaatttgaaagaaatctaTTGGGAGGGTTTAAATGTAAGTATAT
TTCTGAAGAAATGtgaagaatttctgtccaactacaGTAGGGAAAAATTT
ATGTGTGGTTATGGTTTGGCGAATGACTGAAGAGTCTTTCAGAGCGAATT
AATTAGGTGGATGGCTTAAacatttatatttgataaagaTTCATTTTGAT
AATTCATGAAGTGATTGAGCTAAATGTTggaaagaattaattttggattt
gggtgtcatccgtgaaattaagttctaaagtctattcacgataagtgtgc
actcttttttcatttaccaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNttgtccggggggtaaaacctattgtccg
gggggccaaaagtcaccctgtccggggggtaaatcactaaaaattgttat
atcctccaccccccatgtaaaaacttttttctggaagagcccattcatGC
AAATTTAacccccgcgaaaatttatcccattaaagtagacaTTCATTAAA
ATTAACTCAAAGACCtgcatttatatttttttctaggTTCGTGATATACC
CATTCGTGTTCATCAATCTAGGGAAACTTTGCTTTCACACATGCGCAGTA
AAGCATTTCAAGCGGAACCTCATTACACAATGAAAATTGCTGTCCTCGGC
CAAGCCAATCATGGAAAAACTACACTGATTCGTAGATTATTGGATGTTAG
TGGAGGAAATGATTCTCTTGGAGGAGGTAATGTCACCGGGAATCTCACCT
GTCTTCGCTTGTCTTAAAATCTTTTGTACCACTTTTATTAAAAGTTCCTC
AGGCCAATCTcgcacttatttctaccatTTGTATAGACATGTAAACATCC
ATAAATCTACCAtgtgtgtagatatgtagaatccgtaaatctaccatatg
tgtacgACATATTTCAAACCCTAAACCCTAActatctaacgtttccagac
aaTTTAATTCCAatttaaccctaaccctaactatcaaagaacgacatatt
caAACCCTAACCTTAACTATCAAAGAACAAAACGAAACGCAAGTCTAgtt
aaaaataatgttttttgaaaatgcgAACTCATCTTTAgcacaccccttct
cacagacccactgagatGAGATCCCtcccactgaaaaaaattgCCCAAAA
TATCGTTTCtagtgaaaaattatactctaatttttgtctctGCTGAAAAT
AAGCGTATCCTCATAATAGTGTGCTTTTTTCATTTCCCACTGAATCTTTC
TGGCTCAAAAGTAATGGAAATCACATCCCAAGCCATAAAAAacttgggaa
tatcaatccccatcgagttttgttcccttatttttacccccactggctga
aaaaatcctaccgagtctgtgagaagggggtgttttaacAGCTGATTTTA
CCATGATGAAAATTCGCGGATTTTGCGGATTTGGTTGTCATCCGCAAaaa
taagtcccaatggaaatttgaaaaggtcTTATCCGCGAAATCTTTTCGAA
TGAAGTCCTAAAATATCGCCATCAAAGAAGCGCTTATAATGCGTATTTCA
CAACCAACATGCCTAGTTTGGCagtaaaattgcaaaaatagcacaaaatt
gtgaaaatattatCTCAAAATAGAGTCCCCGAGAAATCTTAAATTTCCTC
GGATGAGCTAAACCGCGAAATTCAATCtctgcgaaaattaatcccattaa
cTAGAAGAATCAACCCCTAGGAATAGGCGTTTGTTGACCCTAATTCAAAT
TACATTACCTAGATCTAGCTAACattgttataaaaattttctctttctta
agaaaatgatATTGACGTTCAAGAGCTGGTTTTGAGCGGTAGCAATTTCA
CAGACCCACGTTTTCACTTCAACGTATGGGACTTCGCTGGAAAGGAAGAA
CTTTACGTTGCACACAAATGTTTTTTAACTGAGGATTCTTTGAACATACT
GGTTTTTGATGTCACTGAAGTCCAAAGTGGTATGTTTAcgtattaaaaac
tgttttgtttattttcttctgcatttttcttcagaaatttaacaaaagtt
ttgaaatcaaTCTAAATTATTGCGATTGGTTTGACATAGTTATCAAACCC
TATTGCGAAATATGAAAAGATTCATCATACAGATTTTAATCTCCAAATTT
CCGGGCTACTGTTGCACCaggcaaaaactgattattgcATCTTTATCTGT
TTTTTCTGGTCCTCAAGATTTTGAGATGACATAAAGAGGGCTGGAAAAAT
AGTATTTGTTTGTTCCGATTGATTTTAAGGCGTCCGTGACATTGAGCCTT
GGCTTGTCAACCTGGCATCTTACATCTCAAAACCAAATGTTATCATCATT
GGTACAAAGCTTGATCGTATCCCAAAGAAGTCATTTGAAAATGGATTCAA
AGACTATATCGAAGGATATTTAAAAGAATTCATCAAGACATTTGAACCTA
AGATGAGAAACGTGAATCTACACATCTTCGAAGTAATGTCACTTGAAGAT
CGCGAAGGTATCTTTATGCTTTTCTATCTTGACAATTTTAGTATTGTACC
GTATTTACATCTCGGGATGATCAAGCCCTGGTACACAAGTTACACTGATA
CGCGTTTACTAATTTCATCATAGTAGTCGGAAAACAAGGaaacttcaaaa
ttaaaaaaccaTTCCGTTCTAACCGTCTATTAAAAGTATGTGGgcacaat
acacctttcccgaattgttatttaggctttttgacttttttgttttaatg
tttggaTGTTTCTATTTGGTTTTATAAGATTGTATGTCGCAAAACTAAac
aatcaaaaaaagaattatgaaaaaagcacttccggttcttgagttatttt
gatttgaaatttctttataaacaatagaattacatGGAAACGAGGCCGGG
CTGTATGTTTTAATTCTTATAAGGGATTTCACCGTGAGCAAAAAtagtca
taaaaattgatagaaaaaagcttttgagctcaaattttcagcaaGCACTT
GTCTTTATAGGAGGAATACAAAAATATAGTTTTCAATATGGTTTGAAGAC
CTTCGAGAAATACCaaacaattcgggaaaggtgtattttgaGGATTTGAT
TCCGCGAATTGgcgaattttttcagattttcacaaTTTTCGTTAGTTTGA
TTAAGAGATTTTATGTGTatagtagagtctccataactcgaacggctacg
aggaatgaaaatttattcaaattatagagacattcgagtaatggagactc
atttaagagagtttcttagctgaaagaatttttagtgtaaaaacttaatt
ttcgcgaggattaaatttcgcgaatttcgcgagAGAtgagagtttgaaaa
ttttcgcgagggattatatttcgcaaaaaggcgaaattcgcgaaaattcg
cgaaacataatccccgcgaaaaattgTTCCCTTTTGCGTTGATTTCAtgc
attttcatgaatttttgttTCTCCAATTTCCAAATTCGCCTAATTAAATC
TAtgtcaaaaatcgtattttggcctTTTGTTAAATTAgatccacgcaaaa
atttatccacttgaGCTATAATTTTAAAAGCACCGCGGAAAATGCACACC
TCCAAATATATTGAGGAACGAGCAGGGCAGGCCCCGTAATAAGTAATTTT
TTCTTTCGGACTTTTTTATGAGGGGTCAGAACTTTGTGTCGATTTGCCAG
CTTGACTTTGTGGCAGCATCTTTGCGCAGCACCATCCGAATTTTTGTAAC
TTTAGTGCACTTGAATGTTGAGCAAATTTTTGTGAAGTTGTGTTGACAAT
GATAATGCCCAATGATATTTagtgtttttgattttcaattgaaCTAACTA
TTCTAGTATCCGGAATTTCTCAGAAATCGCTGGAAGAGCCAAAGATCACT
TGGAAACTGTCCGCTCGTCCGTTCTTTTTTCACGATATTTTCCATTATTG
CTTTAAACTACAGTCgactttccataactcgaatctcCTCAACTCGATTA
TCTCCGTAAACTCGAACAATTTTTCGGTCTCACGGGGAGATTCTTAGGCT
ATTCTACCTCTCCATAACTCAAATTTCCGTAACTCGAACGATTACTGATT
ATCCCCTTGGCGTTCCAGCACTCGACTATATTACATTTCCCTACTTGCTC
TAACTTTAATAATCAGATATGTCCAATCAGCGTTCCAGCTTGTTTCATCT
TCAttacttcatttttcaatttttcgaaaattctcaaaaaatatttccaa
ttgTGTATAATTTCTATAGCATAAATAGTTGCTGAGAATTTGCTAAAAAG
GTAAAGTGTCTATACATACCTTTGAGGCTGATTTTGGTGATGCAGAgtga
ttaccttaagggaagttTTTTTTACGGAATTGCGGTTCACATCAGCTTAA
AATTCGAAAGTTTCGCGGAATTTGATTTTGTGgttgagagaattttttgt
tcataatatgccctattttgccctaaaaagatttaaattctgaaaatatt
cgtgtttcgcggaatttaatttcgtggatttgtcaaaaaacgcgaaaatt
tgttccgcaaaaatttgttcccacgaaaatttcttcccttaggtTATCCA
GCGTGTCCATAAAAAAACGGTAAATCCTCAGAATTCATTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067658-exon-scaffold_472-1491911889:239685..240281 | TCONS_00067658-exon-scaffold_472-1491911889:239685..240281 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1510915933:239685..240281 | TCONS_00067658-exon-scaffold_472-1510915933:239685..240281 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1575043694:239685..240281 | TCONS_00067658-exon-scaffold_472-1575043694:239685..240281 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1491911889:241979..242624 | TCONS_00067658-exon-scaffold_472-1491911889:241979..242624 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1510915933:241979..242624 | TCONS_00067658-exon-scaffold_472-1510915933:241979..242624 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1575043694:241979..242624 | TCONS_00067658-exon-scaffold_472-1575043694:241979..242624 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1491911889:244421..244610 | TCONS_00067658-exon-scaffold_472-1491911889:244421..244610 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1510915933:244421..244610 | TCONS_00067658-exon-scaffold_472-1510915933:244421..244610 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1575043694:244421..244610 | TCONS_00067658-exon-scaffold_472-1575043694:244421..244610 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1491911889:245687..245863 | TCONS_00067658-exon-scaffold_472-1491911889:245687..245863 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1510915933:245687..245863 | TCONS_00067658-exon-scaffold_472-1510915933:245687..245863 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1575043694:245687..245863 | TCONS_00067658-exon-scaffold_472-1575043694:245687..245863 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1491911889:246164..246391 | TCONS_00067658-exon-scaffold_472-1491911889:246164..246391 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1510915933:246164..246391 | TCONS_00067658-exon-scaffold_472-1510915933:246164..246391 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1575043694:246164..246391 | TCONS_00067658-exon-scaffold_472-1575043694:246164..246391 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1491911889:248477..248527 | TCONS_00067658-exon-scaffold_472-1491911889:248477..248527 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1510915933:248477..248527 | TCONS_00067658-exon-scaffold_472-1510915933:248477..248527 | Clytia hemisphaerica | exon |
| TCONS_00067658-exon-scaffold_472-1575043694:248477..248527 | TCONS_00067658-exon-scaffold_472-1575043694:248477..248527 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:239685..248527 + |
Blast
BLAST of TCONS_00067658 vs. Swiss-Prot (Human)
Match: LRRK2 (Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens GN=LRRK2 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 7.307e-33 Identity = 96/355 (27.04%), Postives = 182/355 (51.27%), Query Frame = 2
Query: 650 KCSGVKTKLGQKCLKVILLSKKYCCDSRNKVNWEQLGLTHLEESYINDIANYHKLSLVDNLISHLPWNLEVLVNLTHLDLSQNKVQEIPVTLLQLPCLRTLNLSCILIESLPQTNKWSPXXXXXXXXXXXXTSL-----PSKIDSKITYLSIANNKFKEFPMVICNMKTLETLDITGNKDIKKLPIQLGYNTNLKEIYWEGLNVRDIPIRVHQSRETLLSHMRSKAFQAEPHYTMKIAVLGQANHGKTTLIRRLLDVSGGNDSLGGEN-DIDVQELVLSGSNFTDPRFHFNVWDFAGKEELYVAHKCFLTEDSLNILVFDVTEVQSGVRDIEPWLVNLASYISKPNVIIIGTKLD 1696
K SG+ + L K LK++ LSK + ++ L E+++ S N ++ +P+ + ++T L LSQNK IP +L LP LR+L++S I+ LP W L L + S+ + + S++ L +++NK KE P I ++ L +LD++ N +++ P ++G + + ++ + L++ + + ++ ++ + +A P+ MK+ ++G GKTTL+++L+ + + IDV++ + + NVWDFAG+EE Y H F+T+ +L + V+D+++ Q+ V ++PWL N+ + S VI++GT LD
Sbjct: 1118 KISGICSPLRLKELKILNLSKNH--------------ISSLSENFLEACPKVESFSARMNFLAAMPF---LPPSMTILKLSQNKFSCIPEAILNLPHLRSLDMSSNDIQYLPGPAHWKSLNLRELLFSHNQISILDLSEKAYLWSRVEKLHLSHNKLKEIPPEIGCLENLTSLDVSYNLELRSFPNEMGKLSKIWDLPLDELHLNFDFKHIGCKAKDIIRFLQQRLKKAVPYNRMKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLD 1455
The following BLAST results are available for this feature:
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