TCONS_00067771 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00067771
Unique Name	TCONS_00067771
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2679

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_475:20904..27105+
coding sequence from alignment at scaffold_475:20904..27105+

transcript sequence

>TCONS_00067771 ID=TCONS_00067771|Name=TCONS_00067771|organism=Clytia hemisphaerica|type=transcript|length=2679bp
NNttttttcttcttaaaatattgaatttcaaaacttaaaaattaaattag
atTAAAAATACAACGACCGCAAGAAAGTGCTTGGAATTCTCACTGGCATT
TTCTGTTTGTTTGTCtctttcttttagcttttctAGTGATGGGCTTTTAG
TTCTTTTTGGTATTATCTGAAATGTAATTAAACCATTTTGAGTGAAAACT
CTTAGAGTAATTTGAAGCTGAGGTTTCATACAACCTCTAGagagaaattt
tatcaaatgtCAGAAAATTTAGACTTTGTTCTTGTTTCTCCACACAACTC
AAtgttttacaaaaatctttaaCATCAGTGAGTATTTTTAGTCAAGTGTT
ATATTTTATTGCAATACCTTAATCGGGTTAATCTTCACAAGATTTGATTT
TAGGCttgtcaaatttttgcctttttcacaaaaatgaattttaaaatgac
tagatttttctatttttgatgCGAAAAGCGCTATAAATATACTTTTTTGA
CGAAGTCTTTCATCCAGTGCCTGGCCTAttcacaaaataaaattaaagcc
AATTTTTCGAAACACTGACTCAcagttgaaaataaagtaaatCCGATTGA
CATAATatgtttctcttctttcttactgcttttcttaaaatttttatctt
accaaaattacaaaaaaaatagaCGTGTTACCTGAATATTTGCTTGGCTA
ATAGTATAAGATAATTTTGTTCTATTTTAGGGGTTTGTTAAAACGAACTG
GTTTAAAGCCAGctgATGCTGGGTATGTTATTATGGGTAGTGTCATTCAA
GAGGTTAAAACAGCCAATATTGCAAGAGAGGCAATGTTAAGCTGTGGCTT
CCCAGCCAGTGTTCCAGCCCACAGTGTTGTACAAGCTTGCATCTCTAGTA
ACCAAGCTATCACCTCAGcAATGGGGTTGATATTATCTGGACAATGTGAC
ACAACTATTGCTGGTGGTGTTGAATTTATGTCAGATGTTCCGATTAGACT
TAACAGAGATTtacgaaaaaaattattaacatTAAACAGAGCCAAATCTG
CTGGACAGCGACTTAGCATTTTGGGTTCAATTAGACCAAAACATCTGTCT
CCAGAGctTCCAGCCATCGCAGAATTCAGCACAGGAGAAACTATGGGCAA
AAGTGGAGACAGATTAGCTGCTGCATTCGATGTTTCACGACAAGATCAAG
ATGAGTTTGCATTACGTTCACACAGTTTAGCTTTAAAAGCACAAGAAGAA
GGCTTACTTGACGATGTTTTATCATTCAAAGTTCCAGGAGGTGATTACGT
ATCCAAAGACAACGGTATTAAAGCCTCATCCATAGAAAAGATGGCAAAAC
TGAAGCCAGCTTTCATCAAACCACACGGCACTGTCACCGCTGCCAACGCT
TCTTTCTTGACTGATGGTGCTTCAGCATGTTTGATCATGACTGAAGAGAA
AGCTTTGGCTATGGGATACAAACCAAAAGCATACTTAAGGGACTTCATGT
ACGCTTCACAAGATCCTAAAGATCAACTTTTACTTGGCCCGACTTATTCT
ACAGCCGCTTTATTAGACAAAACTGGTTTAACTTTGAAAGATATTGATGT
TTTCGAAGTCCACGAAGCATTTGCTGGACAAGTGCTGGCCAACTTGAAAG
CTATGGACTCTGACTTCTTTGCCACCAAAGAAATGGGACGTAAAAGTAAA
TTGGGAGCTATTCCAATGGACAAATTGAACTTATGGGGAGGAAGTTTATC
TCTTGGACACCCTTTCGGTGCCACTGGTGTACGTCTGGTCACCACTGCAG
CCAACAGACTCATCCATGAAGATAAAGAACGCGCACTTGTAACCGCTTGT
GCTGCTGGGGGTTTGGGACACGCCATGATTATTGAAAGATATCCTTCCAA
ATAGATGATGATCAATGCCAATAAACACTAAATTATTTCACCACTACACA
GATaacccaattttttattttccttattTCTTGTATGTATATTTTAGTAT
GGATTTTTTTCGCGCGAATTTTATTATTGCTTTATTAGAATTCATATAAA
ACTAAaaccaatatttttctttttcttgtgaTTCAACCATTACCTTTCGA
TAGTAAATTGTAAATTACCAACACCACATAGAGGCCGaaccaaaatttta
aatctcCCCTGATTATCTACTACTCGTCAAGATTTCAcgaaaaaaatagg
aagataCTCTCAGGGTTAACTAAAAGTGTGATTTAGTGGTAATTATTCGC
CtgcaatgaaaaattgaaagctaTTTACAAAGTTTTCTATATATCTACAA
GTTTTTGCTTCCATCAGTGAAATGTTTATTTACTTCTTCTTCATACAAAT
AAGATGGCTGCTATGAATTCTAAGAAAGATTCATAAGAAAAACTATAAAT
TCTTGGAAATTTTCCTTTAtagaaaagtaaaaacaatattattctttcaa
agaaaaaacGAAACAGAAGTATTTTCGTATTTTGAGAATATTAATATTTC
TATCAACTATGATCATATCCTCTGGTATAGGTAAGGGGAATTCTTTTCGT
TCGGGTTATTTTGTTATGATATGATACTTCATGGATANCTTGACTTTACA
GATTCCGTGATGTTCATCAATGGTGGGTTCGATTACACAACACCCATCAC
CACAATCTCCATCCTTATCACAAATCCCA

Run BLAST on NCBI

protein sequence of TCONS_00067771-protein

>TCONS_00067771-protein ID=TCONS_00067771-protein|Name=TCONS_00067771-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MGSVIQEVKTANIAREAMLSCGFPASVPAHSVVQACISSNQAITSAMGLI
LSGQCDTTIAGGVEFMSDVPIRLNRDLRKKLLTLNRAKSAGQRLSILGSI
RPKHLSPELPAIAEFSTGETMGKSGDRLAAAFDVSRQDQDEFALRSHSLA
LKAQEEGLLDDVLSFKVPGGDYVSKDNGIKASSIEKMAKLKPAFIKPHGT
VTAANASFLTDGASACLIMTEEKALAMGYKPKAYLRDFMYASQDPKDQLL
LGPTYSTAALLDKTGLTLKDIDVFEVHEAFAGQVLANLKAMDSDFFATKE
MGRKSKLGAIPMDKLNLWGGSLSLGHPFGATGVRLVTTAANRLIHEDKER
ALVTACAAGGLGHAMIIERYPSK

Run BLAST on NCBI

transcript from alignment at scaffold_475:20904..27105+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00067771 ID=TCONS_00067771|Name=TCONS_00067771|organism=Clytia hemisphaerica|type=transcript|length=6202bp|location=Sequence derived from alignment at scaffold_475:20904..27105+ (Clytia hemisphaerica)
NNttttttcttcttaaaatattgaatttcaaaacttaaaaattaaattag
atTAAAAATACAACGACCGCAAGAAAGTGCTTGGAATTCTCACTGGCATT
TTCTGTTTGTTTGTCtctttcttttagcttttctAGTGATGGGCTTTTAG
TTCTTTTTGGTATTATCTGAAATGTAATTAAACCATTTTGAGTGAAAACT
CTTAGAGTAATTTGAAGCTGAGGTTTCATACAACCTCTAGagagaaattt
tatcaaatgtCAGAAAATTTAGACTTTGTTCTTGTTTCTCCACACAACTC
AAtgttttacaaaaatctttaaCATCAGTGAGTATTTTTAGTCAAGTGTT
ATATTTTATTGCAATACCTTAATCGGGTTAATCTTCACAAGATTTGATTT
TAGGCttgtcaaatttttgcctttttcacaaaaatgaattttaaaatgac
tagatttttctatttttgatgCGAAAAGCGCTATAAATATACTTTTTTGA
CGAAGTCTTTCATCCAGTGCCTGGCCTAttcacaaaataaaattaaagcc
AATTTTTCGAAACACTGACTCAcagttgaaaataaagtaaatCCGATTGA
CATAATatgtttctcttctttcttactgcttttcttaaaatttttatctt
accaaaattacaaaaaaaatagaCGTGTTACCTGAATATTTGCTTGGCTA
ATAGTATAAGATAATTTTGTTCTATTTTAGGGGTTTGTTAAAACGAACTG
GTTTAAAGCCAGGTAAATTTACAATTCTTTTTAGATATCTCTACTGTACC
TTTGCTAGTTCTTTACTGTTTAATGAGACTCCTACCGACTTTATGAATTT
TACAAAACCCTAAAAAGATGAAACAAGTGAGAAAGAAACTGATTTGAAAT
TTAGTTCACACCATTTAAATTCAGGAAAACAACGGCTACACAGTGAAATC
ACtgactaaaaatattaaaatgcatcttttttaaaaattttcagctgATG
CTGGGTATGTTATTATGGGTAGTGTCATTCAAGAGGTTAAAACAGCCAAT
ATTGCAAGAGAGGTATAACAGTCAATTATTGCTTATTCAAACTCCATTCA
AGTAGCCTGTTAGATCTGTAATTTGCATCCCTTCTAttctaattcaaaga
aattacaGCTGATTTTAAAATGATCCTACGGTGATGGACAATCTACTGAA
CTCTTTAAAAGAGCATATTTTACAGAATTCTTTTTACAAAAAGCTGTTTA
TTATGGCTTTAGAAAGCTCTTTAATAATGTATAATATAATAGTTTaatca
aacattttttattctAGGCAATGTTAAGCTGTGGCTTCCCAGCCAGTGTT
CCAGCCCACAGTGTTGTACAAGCTTGCATCTCTAGTAACCAAGCTATCAC
CTCAGGTATACATTGATCATACATTGGCAACCTTTAGTGAGAGGCAAACC
TTAGGATCTGTAACATCTTTTCTAGGACAAAACCACGTAAATTTTGATAG
TTTGATGTactaaaagtcaatttttcaaggTGGTCCACTGTTAAGACCta
gcaaaaacttcaaaagacgGACGTTACTAAGCGAAACTTTCACATGCCAG
TCTTTGGTCCATAACAATTTTAGCTTCAAATAAATTCAAGTTTCTAAAGA
AAAATACTTACGACTGTATTCCAAAAAAGCTGGAAAGGAATTAAAATGAC
ACAGCTCCTATATGAATGGCCCTTACAAATAAATGTATTGGTTTAGTAGG
CTTGAACATTATTGTCTGTTCAGTCAAATCTTTGTTGCaaagttgttaaa
aagaaaCGTCTACGTCTATCCACCTAtaatagttgaaggttttaaagaaa
gtttgttgaaaatagcaaaaaattacATACAGTATAGTATACCtacgttt
tttttcttatttagcAATGGGGTTGATATTATCTGGACAATGTGACACAA
CTATTGCTGGTGGTGTTGAATTTATGTCAGATGTTCCGATTAGACTTAAC
AGAGATTtacgaaaaaaattattaacatTAAACAGAGCCAAATCTGCTGG
ACAGCGACTTAGCATTTTGGGTTCAATTAGACCAAAACATCTGTCTCCAG
AGGTAAGCAGTTCAAGTCACATGTATAGACCGACTTGAAAATTACTACTC
ACTTTAAACAGGAATTCTGTCGAAAATCTGAAATCTGTCAGGAAATCAAg
tacagaaaaaaaataactATAGCTTGAATTTTGGctaaacatgaaatttg
acaTATataatgcaaattttcaactattatctgaaatttgaatatctcag
catggaaaattatattttaaatttttttcagctTCCAGCCATCGCAGAAT
TCAGCACAGGAGAAACTATGGGCAAAAGTGGAGACAGGTACGGAGAAATA
TCTAACTGTActgtcttttttaacatttttaatttcttattAAGccattc
tcaacttcagttgagctagaatctgagaatgtctgtatgtctgtatgtcc
caaaactttggggcagcctggagacttcaaagattgtcggatttggctga
aatttggcacacttttgttccttaggtgaatatctgggggtgtttatttt
attttttttaaattttgatttttggggcgtggggacgagttttttgccaa
aacgatcTTTTGTGACTTCAATAATGAGTTTTAAAGCtagtttgttttgc
tacaaTTGGGCCTTTGAATAATCTGaagctactgaagttgagcccagtgc
gttgcgcacgctCGACTATGGTTTAACatatctttgatttgatattgacT
TCCTTTTTCAGATTAGCTGCTGCATTCGATGTTTCACGACAAGATCAAGT
AAGTTATCATAGTTCTTAAGTGCTGTTAACTTTTCAAAGGTGCCTTATTT
CACTCTTTAATCTTTCAATTAAACATATTACtttgaaacaatttttgaaa
caatgttgttctTCTTAACCAGGATGAGTTTGCATTACGTTCACACAGTT
TAGCTTTAAAAGCACAAGAAGAAGGCTTACTTGACGATGTTTTATCATTC
AAAGTTCCAGGTAAAGAAATATCCTTTGTTCTTTCCCATGAAATATAAGT
AGTTAGACTATGTTCAGACATTACGGTTCCGTTTTGCTCCGgtgtgattt
tcgttacggatcgagagtgttcatattggttttggAACGTTtctgagcaa
gaaaacggagccgttccgatgaaaattgTGGAgcaaaaccgtttcgatct
gttttgctgtgtaacgtcttcttttttgacgttttaaattttgacgttca
cacttgttttgaACCGTAACGTCTAAACATGGTCTTAGTGATCGATGAAA
ACTTCAATCATATAGCTTTGTATTTATTGATGCTACGCCGCCCTAAAATT
TTATAGTTAAGATCTAGAAAAAATGATTTGAAGCAATATCGTATACCTTT
TACACTGAATTCTTTCcggttttttttcttattcaatACAGGAGGTGATT
ACGTATCCAAAGACAACGGTATTAAAGCCTCATCCATAGAAAAGATGGCA
AAACTGAAGCCAGCTTTCATCAAACCACACGGCACTGTCACCGCTGCCAA
CGCTTCTTTCTTGACTGATGGTGCTTCAGCATGTTTGATCATGACTGAAG
AGAAAGCTTTGGCTATGGGATACAAACCAAAAGCATACTTAAGGTAAAGG
AGGCGGTTTGGCACGTCGAATAAACCTTTCTTCAAGAGAGCATCTACTTG
ATCTAACTTTGGAGACGAAATGTCAAAATAAGCTTGAATGCCGGCgggtt
ttagtttttttattatttattttggtAAACAAGAATTTCCCAAACTATTG
ACCTTTGATTCTCAGCAATTTTCTTCCATCATTTGCTcctcaaatttcat
tttcacaatTGCTTTCTTCACATTTCAGGGACTTCATGTACGCTTCACAA
GATCCTAAAGATCAACTTTTACTTGGGTGAGATTTTTAAATATcaagatt
aatttttttggttttcttagcttgttttggtttttgaagTAAATCGGCGA
AAATTCAAATATTCTTTGGGCTCTCAACAATCTGAAACctgtaatttttt
tatatttgattatgTTTTATGTACAAAGGTTTATTTTGGTCTCTGAAATT
ATAAATCGGTGAAAATTCAAATATTCTTTGCTTGGCTTTCAACCCTCCAA
AACCTGTGATCTTATGTTTGATAATTTTAGATGAACCTTTCTTTTTTCTA
GCCCGACTTATTCTACAGCCGCTTTATTAGACAAAACTGGTTTAACTTTG
AAAGATATTGATGTTTTCGAAGTCCACGAAGCATTTGCTGTGAGTTCCAt
tctttttctttggattaTTATAACTTGGGGAGGGTGCTGATGCAACGATA
AAATGGATAATAGAGAATAAATtatgttgtattttaatgagaAATCCATG
AAAATGTGAAGAAATTGGAGCTCCCTTATCCCTCGTTCATTTCTCTGGTC
CTCATGtatgtaatttttttgttttaaatccTGTGTTTTTGTAAATCTTG
TTTCTAGGGACAAGTGCTGGCCAACTTGAAAGCTATGGACTCTGACTTCT
TTGCCACCAAAGAAATGGGACGTAAAAGTAAAgtaagttgaaaatttttt
ttcatattttttatgtttatctAACGATCAGCATTCATTGCAAAATCAAT
GTATTTAAAAGCCTTTGATATGTAATCTTGATTTATTGATCATTTTGCAT
TTTTACTTTCTAGTTGGGAGCTATTCCAATGGACAAATTGAACTTATGGG
GAGGAAGTTTATCTCTTGGACACCCTTTCGGTGCCACTGGTGTACGTCTG
GTCACCACTGCAGCCAACAGACTCATCCATGAAGATAAAGAACGCGCACT
TGTAACCGCTTGTGCTGCTGGGGGTTTGGTaagtagaaaaatattttgat
atcgTCCACAGATGTGTATCTCACTATTATAAATAGTCTTTATAAAAGCT
TATGTAACTTTGCATTTTCTTCCACGCCCAGACTAAGATTGTGTAGCATC
TTGTAATACACCTCAGCGTAAGGAGACTAGACCATATAGTTTAAGAGGGA
AACAATAATGTCAATTTATCTTTAAGAAATCAACACATTAATTCTAGACA
TTTGACGTACGCCCTTCCCGGTCATTTGAACCCAATCCCCAATGCGGAGG
CCTATTTTAAATGTGTGATAAGGTTCATCGTTCAATAAGATCTGTTACGT
AAGCTTTGAATCTGTGGCGCCACTTATATTTTAGCCATGTCGTAGCAACC
CATGCTTCAACCAGAAACCTTTATTTTGATGAAGCGAAAGATAATTGATT
AAAAAGGAACATCAATAATTCATTTTTCTATTCTCCAGGGACACGCCATG
ATTATTGAAAGATATCCTTCCAAATAGATGATGATCAATGCCAATAAACA
CTAAATTATTTCACCACTACACAGATaacccaattttttattttccttat
tTCTTGTATGTATATTTTAGTATGGATTTTTTTCGCGCGAATTTTATTAT
TGCTTTATTAGAATTCATATAAAACTAAaaccaatatttttctttttctt
gtgaTTCAACCATTACCTTTCGATAGTAAATTGTAAATTACCAACACCAC
ATAGAGGCCGaaccaaaattttaaatctcCCCTGATTATCTACTACTCGT
CAAGATTTCAcgaaaaaaataggaagataCTCTCAGGGTTAACTAAAAGT
GTGATTTAGTGGTAATTATTCGCCtgcaatgaaaaattgaaagctaTTTA
CAAAGTTTTCTATATATCTACAAGTTTTTGCTTCCATCAGTGAAATGTTT
ATTTACTTCTTCTTCATACAAATAAGATGGCTGCTATGAATTCTAAGAAA
GATTCATAAGAAAAACTATAAATTCTTGGAAATTTTCCTTTAtagaaaag
taaaaacaatattattctttcaaagaaaaaacGAAACAGAAGTATTTTCG
TATTTTGAGAATATTAATATTTCTATCAACTATGATCATATCCTCTGGTA
TAGGTAAGGGGAATTCTTTTCGTTCGGGTTATTTTGTTATGATATGATAC
TTCATGGATANCTTGACTTTACAGATTCCGTGATGTTCATCAATGGTGGG
TTCGATTACACAACACCCATCACCACAATCTCCATCCTTATCACAAATCC
CA

Coding sequence (CDS) from alignment at scaffold_475:20904..27105+

>TCONS_00067771 ID=TCONS_00067771|Name=TCONS_00067771|organism=Clytia hemisphaerica|type=CDS|length=1122bp|location=Sequence derived from alignment at scaffold_475:20904..27105+ (Clytia hemisphaerica)
ATGGGTAGTGTCATTCAAGAGGTTAAAACAGCCAATATTGCAAGAGAGGC
AATGTTAAGCTGTGGCTTCCCAGCCAGTGTTCCAGCCCACAGTGTTGTAC
AAGCTTGCATCTCTAGTAACCAAGCTATCACCTCAGcAATGGGGTTGATA
TTATCTGGACAATGTGACACAACTATTGCTGGTGGTGTTGAATTTATGTC
AGATGTTCCGATTAGACTTAACAGAGATTtacgaaaaaaattattaacat
TAAACAGAGCCAAATCTGCTGGACAGCGACTTAGCATTTTGGGTTCAATT
AGACCAAAACATCTGTCTCCAGAGctTCCAGCCATCGCAGAATTCAGCAC
AGGAGAAACTATGGGCAAAAGTGGAGACAGATTAGCTGCTGCATTCGATG
TTTCACGACAAGATCAAGATGAGTTTGCATTACGTTCACACAGTTTAGCT
TTAAAAGCACAAGAAGAAGGCTTACTTGACGATGTTTTATCATTCAAAGT
TCCAGGAGGTGATTACGTATCCAAAGACAACGGTATTAAAGCCTCATCCA
TAGAAAAGATGGCAAAACTGAAGCCAGCTTTCATCAAACCACACGGCACT
GTCACCGCTGCCAACGCTTCTTTCTTGACTGATGGTGCTTCAGCATGTTT
GATCATGACTGAAGAGAAAGCTTTGGCTATGGGATACAAACCAAAAGCAT
ACTTAAGGGACTTCATGTACGCTTCACAAGATCCTAAAGATCAACTTTTA
CTTGGCCCGACTTATTCTACAGCCGCTTTATTAGACAAAACTGGTTTAAC
TTTGAAAGATATTGATGTTTTCGAAGTCCACGAAGCATTTGCTGGACAAG
TGCTGGCCAACTTGAAAGCTATGGACTCTGACTTCTTTGCCACCAAAGAA
ATGGGACGTAAAAGTAAATTGGGAGCTATTCCAATGGACAAATTGAACTT
ATGGGGAGGAAGTTTATCTCTTGGACACCCTTTCGGTGCCACTGGTGTAC
GTCTGGTCACCACTGCAGCCAACAGACTCATCCATGAAGATAAAGAACGC
GCACTTGTAACCGCTTGTGCTGCTGGGGGTTTGGGACACGCCATGATTAT
TGAAAGATATCCTTCCAAATAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042329	XLOC_042329	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00067771-protein	TCONS_00067771-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_475	supercontig	scaffold_475:20904..27105 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
246.879	261.896	281.432	277.262	156.257	125.007	195.78	245.663	314.078	345.577	668.159	346.336	188.758	197.927	211.741	253.217	152.093	142.783	105.415	135.042	84.1313	87.3862	121.07	120.829	203.995	164.006	201.716	199.913	131.205	109.525

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR020616	Thiolase_N
IPR016039	Thiolase-like
IPR002155	Thiolase
IPR020617	Thiolase_C
IPR020613	Thiolase_CS
IPR020610	Thiolase_AS

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups

Blast

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BLAST of TCONS_00067771 vs. Swiss-Prot (Human)
Match: ECHB (Trifunctional enzyme subunit beta, mitochondrial OS=Homo sapiens GN=HADHB PE=1 SV=3)

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 271/388 (69.85%), Postives = 314/388 (80.93%), Query Frame = 3

Query:  732 GLLKRTGLKPADAGYVIMGSVIQEVKTANIAREAMLSCGFPASVPAHSVVQACISSNQAITSAMGLILSGQCDTTIAGGVEFMSDVPIRLNRDLRKKLLTLNRAKSAGQRLSILGSIRPKHLSPELPAIAEFSTGETMGKSGDRLAAAFDVSRQDQDEFALRSHSLALKAQEEGLLDDVLSFKVPGGDYVSKDNGIKASSIEKMAKLKPAFIKPHGTVTAANASFLTDGASACLIMTEEKALAMGYKPKAYLRDFMYASQDPKDQLLLGPTYSTAALLDKTGLTLKDIDVFEVHEAFAGQVLANLKAMDSDFFATKEMGRKSKLGAIPMDKLNLWGGSLSLGHPFGATGVRLVTTAANRLIHEDKERALVTACAAGGLGHAMIIERYP 1895
            GLL RT +      Y+I G+VIQEVKT+N+AREA L  GF    PAH+V  ACIS+NQA+T+ +GLI SGQCD  +AGGVE MSDVPIR +R +RK +L LN+AKS GQRLS++   R   L+PELPA++EFST ETMG S DRLAAAF VSR +QDE+ALRSHSLA KAQ+EGLL DV+ FKVPG D V+KDNGI+ SS+E+MAKLKPAFIKP+GTVTAAN+SFLTDGASA LIM EEKALAMGYKPKAYLRDFMY SQDPKDQLLLGPTY+T  +L+K GLT+ DID FE HEAF+GQ+LAN KAMDSD+FA   MGRK+K+G  P++K N WGGSLSLGHPFGATG RLV  AANRL  E  +  LV ACAAGG GHAMI+E YP
Sbjct:   86 GLLHRTSVPKEVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAGGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPELPAVSEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDTVTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENYMGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVEAYP 473

The following BLAST results are available for this feature:

BLAST of TCONS_00067771 vs. Swiss-Prot (Human)

BLAST of TCONS_00067771 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ECHB	0.000e+0	69.85	Trifunctional enzyme subunit beta, mitochondrial O...	[more]

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TCONS_00067771 (transcript) - C. hemisphaerica