TCONS_00067803 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067803
Unique NameTCONS_00067803
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3400

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067803 ID=TCONS_00067803|Name=TCONS_00067803|organism=Clytia hemisphaerica|type=transcript|length=3400bp
ACACTTCAACCAAACCAATTTACattacaaaattcaaaataccATGAAGT
TCTGGATGATGTCTTGTCTAAAGTTGCAGAAGAATTAGACTACAAACTCG
AAAATGTCCAGGTTAAAATCAACAAACTTATGCTGTATCAAGAGAGTGAT
GATAACGATGATAATGATGATgggtttgtttttgaaaataacaacgAGAC
AGATAAAACATGCTTTGCCACACTTCTGATGCAACTGCCATCTGTCTTCA
AAGGTCATAAAGTTATTGTGTATTCTAAGGGAAAGCTCCAAAGAATATTG
ATATCAGtgaatcaaaatatgaaataatttACACAGCTTTCTTCAACAGT
TGTCAAAGAAAGATGACATCATTAAAAGAAGGGTATCGAATTGTTTTGAT
GTATGATTTGTTATGGATTGGTGATTGTCAACCTCCCAATGACCAAATGT
TTCAGCAAAGTATCCAGAAGGCCTCCTTTCTTCTTGAAAAGatTGATGAG
GGTATTTTGTGGACGCTTGATGGAAAGTATGATAATGTATCACTTTCTGA
ACAACTTGCTCAAAATTATGGTGAAGATGTTTTGAATGGCAAAGATCATC
AAGTAATTTCTTGTTTGGCAAGAGCTAACGAGTTACTGAtCGATGAGAAG
AAGTACGAGTTTCATTTGCTGGAAATTCAACGAGCTTTGGATGAAGAAGG
GAGCTTCCGTGGAGAAGGAGAAAGCAGAACTTTCAGAGGAAATATGGATT
ACACAGAAGATCACATCAAAATCTTTTCTTCACGTGAATTGTCAACTGGT
GaaatgaagtatgatttcaaAAACCTTCTCATCCAACCTGAATACCATTT
ACTTGATTTCGAAGAGAAATTCAATGGAAGTTTGAATGAATTTTGGGGAC
AGTGTGACGATGAGAAAATCAACGAAGGTGAGCGTGAACACACTGAATCA
TTTTACGGTGGCATGTATTGGGATCCCTATAGATGTGATATGAGAGAACG
AAAGCATTATCAAACTTACCGAGAAAAATACACCAAACGGGtgagaaaat
attcaaagtATCTATTGTTTGCTTTCCCAAAATCTCAAAAAGCTCACATC
CTTTCGAAATGTGGAATCAAAGAATCATTTAAGTTCCTCGTTGAAGAGTA
TGAAGCTGGCTCCTCAATGTTCAAAGAATATTCCAACACCTTTCTAGAGG
AAGTTCCCATTGAGGAATTTTTCGAAAGTTGTGAAACGTTGGAGGAGGTA
ATTGATGAAAGATTGAATGTTACCATGGTTATGCAGTTTCTTTTGAAAGT
CGGCGACGTTGAGTTAACAAAATCTTTTATCGATAAGGTTATGGGAGCTG
AAAAATATTCAGGTAAATATTACGGcatcgaagaagaagaaatgataaaa
cctttaattaatTTGTTGAAGGCTTTTCCATGGCAACCCCTTAGTGAGTC
GGTTGAGACAGTTATTAGTCATTGTCCAAAAGAACAGTATGAATTTTGGC
TAGATGTGTTTTCATCTACCGGTATCACTGAGATTGCACATAAAGTTCTT
GCGATCAGTTTGCAGAAAATGATGGATGATAAAAGATTCCTTCCGTTATG
gttgaaaatattcaagcttgtttttgaaaacgaagAATTTGGTAATCGTT
GGTGGGATAAGATCATCTCCTGTGAAGATCTTGTCAACAAAGAATTCGAT
ATCATTTCTCATATTTGTTTGAATCTACCCATTGAAACAAACCCAGTAAA
GTTTCCTTCTCTTTTAACCGCTTTGGTGACTTCAATGACAACCGAGGACA
ACCCATATTGTGTTAAGAGGTATGCGGAAAAGTTACTTGATGTTATCGCC
AAAATCAAAGGGAGTGAATTTTTCGAAAGTGCTCTCACTAATTTAAGTAA
TCAGCTTGTTTCTGAAGGTCGTATCTCAACCTTGATAAAACTAGCAGAAC
TCTGTGCACCGAAAGATCAACATTCTCGCCACAATGAAGAAGTTGTTAAA
CTATTTCTGGAAGGGTGTTTTGATTGGTTATCAAAAGCAACTTTCGAAAG
GAAACATATACAAAGTGTTGTCGATATAGTTGTCCTTTTGAACCAGCACA
AACAATTGTATAATGGTCCTATGATTGAGAAATACATAGAGTCGTGTCAG
AAAATATCCGATCCTGATTTTATTTGTAATGTTGTCAACAAGTTATTTAC
CATGTCATGTTCGTTTTACTTTCTCAAGCCGTTACTTCAATCACTTGCCA
ATTTGTTAAGCACCAAAACATTCACCGATCACAAAGCAATGTCTTCAACT
ATCAACCACATGTTCATCCAAGGACCTGAGTTTGATCATCTATTGACTCT
TCTGTTGACTAACGAAAAAATTCTCTCTTCCATTGATCTTCTCAATGAAA
TTCTACATTCACTTCTCAGCAAGGACGACAACATCGAACAATTGAAAACC
AGTATCAATTTCCATGGATTGTTGACCAGCTTCGTCTCTCTAATGCAACA
ACCGAATAACACAAACAAAGAATTTTCATCTCTCCGTCTGGTTCATGAAT
TTCTACTCAGCTTAAGCGACGAATCTCCTTTACATCAACTGGTTCCTCAA
ATAATTGACACAAGTTTGCTGAAAAACGATTTCCCTAAGTGTATACAATA
TCTATCCAAACTTTCCATCCGTGAAACTGAGACATTCAAAACCTTCCTCA
CAACGACAATTCATGCTTTGGGAATCTTCCTCCGCCGATATAATACAATC
ATCGATGCTGAATACCAACTTATTTATGACTTCATAAAACTATTGCTTAA
GAACGACCACTTCACGCCCTTTGCTTTACAGCTTGCTTCGTTGAAAGACC
TTACCAACAACGATTATAGAAACTTATATCATAACAATAAAGAAAGGTCC
GTTCTGGAAAATCTTCTGGCTGCTTTCAAAAATCACCGCAACACCGATTT
CTTTGCCGCCCTCCAGCTCTCTCGCTCAAGGAGTTTGCAAATCTTGAAAG
ATTATGGTCCCCCTAAATTCACCTGGGAGCAACCTGATGCGAATATCGAT
CACGCCAAAGTTCAGGAGTTTCTCCGAAGTAAACGCGAAACAATCATATT
GCGAACTTTCCGATCCTATAAAAGCGCTAATAACCGGATCAAAAAGCATA
GTGGATATAACAAAGACGGGAAATACAGTTTTACCGCCCAAATTCGTACC
GCCAAAAACGGGTGGAAGAGTTTAGTGGATGTTAAGAAAGGGCGTCACAT
TCACGAAGATAGAGAGGAAAGATTTCAGAATCTTATAAATGAATTGGAAG
AAAttcttgaaagtttgaaaatatcaaACGTTGAAAATCCATTAGCTGCG
TAATTTGAATCAATTTCTTTAGGGTTATCTTCATATTCATTTAATCTTTA
Run BLAST on NCBI

protein sequence of TCONS_00067803-protein

>TCONS_00067803-protein ID=TCONS_00067803-protein|Name=TCONS_00067803-protein|organism=Clytia hemisphaerica|type=polypeptide|length=996bp
MTSLKEGYRIVLMYDLLWIGDCQPPNDQMFQQSIQKASFLLEKIDEGILW
TLDGKYDNVSLSEQLAQNYGEDVLNGKDHQVISCLARANELLIDEKKYEF
HLLEIQRALDEEGSFRGEGESRTFRGNMDYTEDHIKIFSSRELSTGEMKY
DFKNLLIQPEYHLLDFEEKFNGSLNEFWGQCDDEKINEGEREHTESFYGG
MYWDPYRCDMRERKHYQTYREKYTKRVRKYSKYLLFAFPKSQKAHILSKC
GIKESFKFLVEEYEAGSSMFKEYSNTFLEEVPIEEFFESCETLEEVIDER
LNVTMVMQFLLKVGDVELTKSFIDKVMGAEKYSGKYYGIEEEEMIKPLIN
LLKAFPWQPLSESVETVISHCPKEQYEFWLDVFSSTGITEIAHKVLAISL
QKMMDDKRFLPLWLKIFKLVFENEEFGNRWWDKIISCEDLVNKEFDIISH
ICLNLPIETNPVKFPSLLTALVTSMTTEDNPYCVKRYAEKLLDVIAKIKG
SEFFESALTNLSNQLVSEGRISTLIKLAELCAPKDQHSRHNEEVVKLFLE
GCFDWLSKATFERKHIQSVVDIVVLLNQHKQLYNGPMIEKYIESCQKISD
PDFICNVVNKLFTMSCSFYFLKPLLQSLANLLSTKTFTDHKAMSSTINHM
FIQGPEFDHLLTLLLTNEKILSSIDLLNEILHSLLSKDDNIEQLKTSINF
HGLLTSFVSLMQQPNNTNKEFSSLRLVHEFLLSLSDESPLHQLVPQIIDT
SLLKNDFPKCIQYLSKLSIRETETFKTFLTTTIHALGIFLRRYNTIIDAE
YQLIYDFIKLLLKNDHFTPFALQLASLKDLTNNDYRNLYHNNKERSVLEN
LLAAFKNHRNTDFFAALQLSRSRSLQILKDYGPPKFTWEQPDANIDHAKV
QEFLRSKRETIILRTFRSYKSANNRIKKHSGYNKDGKYSFTAQIRTAKNG
WKSLVDVKKGRHIHEDREERFQNLINELEEILESLKISNVENPLAA
Run BLAST on NCBI

transcript from alignment at scaffold_476:184504..191167+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067803 ID=TCONS_00067803|Name=TCONS_00067803|organism=Clytia hemisphaerica|type=transcript|length=6664bp|location=Sequence derived from alignment at scaffold_476:184504..191167+ (Clytia hemisphaerica)
ACACTTCAACCAAACCAATTTACattacaaaattcaaaataccATGAAGT TCTGGATGATGTCTTGTCTAAAGTTGCAGAAGAATTAGACTACAAACTCG AAAATGTCCAGGCTAAAATCAACAAACTTGNGATTTCTCTCATCAGAAAT TCTTGGACACTTCAACCAAACCAATTTACattacaaaattcaaaataccA TGAAGTTCTGGATGATGTCTTGTCTAAAGTTGCAGAAGAATTAGACTACA AACTCGAAAATGTTCAGGTTAAAATCAACAAACTTATGCTGTATCAAGAG AGTGATGATAACGATGATAATGATGATgggtttgtttttgaaaataacaa cgAGACAGATAAAACATGCTTTGCCACACTTCTGATGCAACTGCCATCTG TCTTCAAAGGTCATAAAGTTATTGTGTATTCTAAGGGAAAGCTCCAAAGA ATATTGATATCAGtgaatcaaaatatgaaataatttACACAGCTTTCTTC AACAGTTGTCAAAGAAAGATGACATCATTAAAAGAAGGGTATCGAATTGT TTTGATGTATGATTTGTTATGGATTGGTGATTGTCAACCTCCCAATGACC AAATGTTTCAGCAAAGTATCCAGAAGGCCTCCCTTCTTCTTGAAAAGGTA CAGTAGCTTAAATGTTACAGCTTTAAAACACNAATGATGATgggtttgtt tttgaaaataacaacgAGACAGATAAAACATGCTTTGCCACACTTCTGAT GCAACTGCCATCTGTCTTCAAAGGCCATGAAATTATAGTGTATTCTGAAG GGAAAGCTCCAAAGAAGATACAATTTGATATCAGggaatcaaaatatgaa ataatttATACAGCTTTCTTCAACAGTTGTCAAAGAAAGATGGCATCATT AAAAGAAGGGTATCGAATGGTTTTGGTGTATGATTTGTTATGGATTGGTG ATTGTCCACCTCCCAATGACCAAATATTTCAGCAAAGTATTAAGAAGGCC TCCTTTCTTCTTGAAAAGGTACGGAAAATGCCTGACCATTTGACCTTTTT CTCACTCGggttttttataagtttgtcGCTACTGATACAAAGAAAGTTGT GTGTCCGTTCATTTGCTTtgctaaaaaattgaaacaaatcgATTGTAAAG ATTTAAGTGCTTGAGTCCTGTTATGGAGGGTGTTTGAGCTAGAATATGta tttctcaacttcagttgagttagaaNgattttttcactgttccgcgtcgc acccaagactcgttttttcactgttccgcgtcgcacccaagactcgtttg ttcactgttccgcgtcgcacccaagactagtttgttcactgttccgcgtc gcacccaagactcgtttgttaactgttccgcgtcgcacccaagaccgatt ttttcactgttccgcgtcgcacccaagactgattttttcactgttccgcN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttatttttca aaaattttgatttttggggcctggggacgagttttcgccaaaacgaggct aaaactttggggcagcctggagacttcaaagattgttcgatttggctgaa attttgcacacttgttccttgggtgaatatctgggggtgtttttttcatt ttttttNTGTTCCGCGTCatacccaagaccgattttttcactgttccgcg tcgcacccaagactgttttattcactgttccgcgtcgcacccaagactgg tTTTTTCACTATTCcgcttcgcacccaagactgattttttcactgttccg cgtcgcacccaagactgatttttttacTGTTCCACGTCGTActcaagact cgtttgttcactgttccacgtcgcacccaagacttgtttgttcactgttc cgcgttgcacccaagaccaattttttcactgttccgcgtcgcacccaaga ctgattttttcactgttccgcgtcgcacccaagactcgttttttcactgt tccNaaaacgaggctaaaactttggggcagcctggagacttcaaaaattg ttcgatttggctgaaattttgcacacttgttccttgggtgaatatctggg tgtggttttttgcatttttcagaaattttgttttttggggcatggggacg agttttttgccaaaacgaggctaaaactttggagcagcctacaggcctcc aaattggtcggatttggttgaaatttggcacatttgttcattgggtgaat atctgggtgtggttttttgcatttttcagaaatttttttttccggtggaa aaatgcctgaaatatgccggaaaaactggttttttggcattttctcgaga ttttatcattagttttttctgattttttactcAAAGATGCGTGTTAACAA TGCcctaaacatggccgagtccgatttttcagaaatttttttttccggtg gaaaaatgcctgaaatatgccggaaatcgccttTTTTCGNggtgaatatc tgggggtctacaattgggcctatgaataatttgaagccactgaagttgag cccagtgcgttgcgcacgttcgactattttgtttttttcttcattagatT GATGAGGGTATTTTGTGGACGCTTGATGGAAAGTATGATAATGTATCACT TTCTGAACAACTTGCTCAAAATTATGGTGAAGATGTTTTGAATGGCAAAG ATCATCAAGTAATTTCTTGTTTGGCAAGAGCTAACGAGTTACTGAGTACG TAGTATATCAATGTCATGATAGTGTAAAGGTCTTGTTAGACGATAACATT CGGtaacatttttgtgtaacattttctaaaaatagcaaatgtTGTACAAA GTGTTACCGTGTAACATCGATTAACATTCAGAAACATTCAAATGTTAACG AATGNATGTTGTACAAAATGTTACCGTGTAACATCGATTAACATTCAGAA ACATTCAAATGTTAACGAATGTTACGCGCAGAtagcaaatcaaaaaaaaa tgatttgctCTACATGGTTAACATTTTGAATCAAAGGATGCCGCcattta aagggaatttaaaaggATACTTCAAGTGCGCACGTGTTTTTTCGccgatt tttctctctttttctctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTACGCACAAAATGTTTGCGTGTAACATATGTTAAC ATTTCTTGagcacatttttgaaatcttctatttttagaaatgttagcaaa tgttacacaaaaatgttaCTGTCTAACAAGACCTTAAGCtcttcttttga aaattatgcTTCTAGTAATATCATTATGTATCAAgtttgtttgatttgat tttgaaataagctGTGCTTTAAGCAAGAAAAATCTAATTGAATCTGAAGC AGGATGATATCGACAAACAAATTTACATCAAATccttttttatcaatttc aaattcagtCGATGAGAAGAAGTACGAGTTTCATTTGCTGGAAATTCAAC GAGCTTTGGATGAAGAAGGGAGCTTCCGTGGAGAAGGAGAAAGCAGAACT TTCAGAGGTTCGTAATCCGAAGGCTTCCACCTTCTCCGTTTTTTCGTTGT ATATTTTCTAAAGTCAAATGCTATATTTTTTACTCGATGATTAATATTAT TGCATTTCTCCTAGCTATTGGCTTTATCTTCTAATGGTGTTTATAATCTT CTCCtcttcttttttgtcttttcttttaGTTGTGCTGAATTCTAGCTTCG AATCTCTCGCACTAACTAAAAGCTCTCTCATTTCACTCTAAAGTTAAGAC TGGGGTCAGTTAAAAATCGAGCTAGCCTATGTCCTGCTGTGTCTCATAAA AAGGTTGAAACTTTTGGCAGTTAGAGAGACAGTGCTGTGTCTCAAAATGG TAGCCAGAGCCTGTAGATAATGATTAATTTCAATATCAATCTTTGTTCAT AGGAAATATGGATTACACAGAAGATCACATCAAAATCTTTTCTTCACGTG AATTGTCAACTGGTGaaatgaagtatgatttcaaAAACCTTCTCATCCAA CCTGAATACCATTTACTTGATTTCGAAGAGAAATTCAATGGAAGTTTGAA TGAATTTTGGGGACAGTGTGACGATGAGAAAATCAACGAAGGTGAGCGTG AACACACTGAATCATTTTACGGTGGCATGTATTGGGATCCCTATAGATGT GATATGAGAGAACGAAAGCATTATCAAACTTACCGAGAAAAATACACCAA ACGGGtgagaaaatattcaaagtATCTATTGTTTGCTTTCCCAAAATCTC AAAAAGCTCACATCCTTTCGAAATGTGGAATCAAAGAATCATTTAAGTTC CTCGTTGAAGAGTATGAAGCTGGCTCCTCAATGTTCAAAGAATATTCCAA CACCTTTCTAGAGGAAGTTCCCATTGAGGAATTTTTCGAAAGTTGTGAAA CGTTGGAGGAGGTAATTGATGAAAGATTGAATGTTACCATGGTTATGCAG TTTCTTTTGAAAGTCGGCGACGTTGAGTTAACAAAATCTTTTATCGATAA GGTTATGGGAGCTGAAAAATATTCAGGTAAATATTACGGcatcgaagaag aagaaatgataaaacctttaattaatTTGTTGAAGGCTTTTCCATGGCAA CCCCTTAGTGAGTCGGTTGAGACAGTTATTAGTCATTGTCCAAAAGAACA GTATGAATTTTGGCTAGATGTGTTTTCATCTACCGGTATCACTGAGATTG CACATAAAGTTCTTGCGATCAGTTTGCAGAAAATGATGGATGATAAAAGA TTCCTTCCGTTATGgttgaaaatattcaagcttgtttttgaaaacgaagA ATTTGGTAATCGTTGGTGGGATAAGATCATCTCCTGTGAAGATCTTGTCA ACAAAGAATTCGATATCATTTCTCATATTTGTTTGAATCTACCCATTGAA ACAAACCCAGTAAAGTTTCCTTCTCTTTTAACCGCTTTGGTGACTTCAAT GACAACCGAGGACAACCCATATTGTGTTAAGAGGTATGCGGAAAAGTTAC TTGATGTTATCGCCAAAATCAAAGGGAGTGAATTTTTCGAAAGTGCTCTC ACTAATTTAAGTAATCAGCTTGTTTCTGAAGGTCGTATCTCAACCTTGAT AAAACTAGCAGAACTCTGTGCACCGAAAGATCAACATTCTCGCCACAATG AAGAAGTTGTTAAACTATTTCTGGAAGGGTGTTTTGATTGGTTATCAAAA GCAACTTTCGAAAGGAAACATATACAAAGTGTTGTCGATATAGTTGTCCT TTTGAACCAGCACAAACAATTGTATAATGGTCCTATGATTGAGAAATACA TAGAGTCGTGTCAGAAAATATCCGATCCTGATTTTATTTGTAATGTTGTC AACAAGTTATTTACCATGTCATGTTCGTTTTACTTTCTCAAGCCGTTACT TCAATCACTTGCCAATTTGTTAAGCACCAAAACATTCACCGATCACAAAG CAATGTCTTCAACTATCAACCACATGTTCATCCAAGGACCTGAGTTTGAT CATCTATTGACTCTTCTGTTGACTAACGAAAAAATTCTCTCTTCCATTGA TCTTCTCAATGAAATTCTACATTCACTTCTCAGCAAGGACGACAACATCG AACAATTGAAAACCAGTATCAATTTCCATGGATTGTTGACCAGCTTCGTC TCTCTAATGCAACAACCGAATAACACAAACAAAGAATTTTCATCTCTCCG TCTGGTTCATGAATTTCTACTCAGCTTAAGCGACGAATCTCCTTTACATC AACTGGTTCCTCAAATAATTGACACAAGTTTGCTGAAAAACGATTTCCCT AAGTGTATACAATATCTATCCAAACTTTCCATCCGTGAAACTGAGACATT CAAAACCTTCCTCACAACGACAATTCATGCTTTGGGAATCTTCCTCCGCC GATATAATACAATCATCGATGCTGAATACCAACTTATTTATGACTTCATA AAACTATTGCTTAAGAACGACCACTTCACGCCCTTTGCTTTACAGCTTGC TTCGTTGAAAGACCTTACCAACAACGATTATAGAAACTTATATCATAACA ATAAAGAAAGGTCCGTTCTGGAAAATCTTCTGGCTGCTTTCAAAAATCAC CGCAACACCGATTTCTTTGCCGCCCTCCAGCTCTCTCGCTCAAGGAGTTT GCAAATCTTGAAAGATTATGGTCCCCCTAAATTCACCTGGGAGCAACCTG ATGCGAATATCGATCACGCCAAAGTTCAGGAGTTTCTCCGAAGTAAACGC GAAACAATCATATTGCGAACTTTCCGATCCTATAAAAGCGCTAATAACCG GATCAAAAAGCATAGTGGATATAACAAAGACGGGAAATACAGTTTTACCG CCCAAATTCGTACCGCCAAAAACGGGTGGAAGAGTTTAGTGGATGTTAAG AAAGGGCGTCACATTCACGAAGATAGAGAGGAAAGATTTCAGAATCTTAT AAATGAATTGGAAGAAAttcttgaaagtttgaaaatatcaaACGTTGAAA ATCCATTAGCTGCGTAATTTGAATCAATTTCTTTAGGGTTATCTTCATAT TCATTTAATCTTTA

Coding sequence (CDS) from alignment at scaffold_476:184504..191167+

>TCONS_00067803 ID=TCONS_00067803|Name=TCONS_00067803|organism=Clytia hemisphaerica|type=CDS|length=2991bp|location=Sequence derived from alignment at scaffold_476:184504..191167+ (Clytia hemisphaerica)
ATGACATCATTAAAAGAAGGGTATCGAATTGTTTTGATGTATGATTTGTT
ATGGATTGGTGATTGTCAACCTCCCAATGACCAAATGTTTCAGCAAAGTA
TCCAGAAGGCCTCCTTTCTTCTTGAAAAGatTGATGAGGGTATTTTGTGG
ACGCTTGATGGAAAGTATGATAATGTATCACTTTCTGAACAACTTGCTCA
AAATTATGGTGAAGATGTTTTGAATGGCAAAGATCATCAAGTAATTTCTT
GTTTGGCAAGAGCTAACGAGTTACTGAtCGATGAGAAGAAGTACGAGTTT
CATTTGCTGGAAATTCAACGAGCTTTGGATGAAGAAGGGAGCTTCCGTGG
AGAAGGAGAAAGCAGAACTTTCAGAGGAAATATGGATTACACAGAAGATC
ACATCAAAATCTTTTCTTCACGTGAATTGTCAACTGGTGaaatgaagtat
gatttcaaAAACCTTCTCATCCAACCTGAATACCATTTACTTGATTTCGA
AGAGAAATTCAATGGAAGTTTGAATGAATTTTGGGGACAGTGTGACGATG
AGAAAATCAACGAAGGTGAGCGTGAACACACTGAATCATTTTACGGTGGC
ATGTATTGGGATCCCTATAGATGTGATATGAGAGAACGAAAGCATTATCA
AACTTACCGAGAAAAATACACCAAACGGGtgagaaaatattcaaagtATC
TATTGTTTGCTTTCCCAAAATCTCAAAAAGCTCACATCCTTTCGAAATGT
GGAATCAAAGAATCATTTAAGTTCCTCGTTGAAGAGTATGAAGCTGGCTC
CTCAATGTTCAAAGAATATTCCAACACCTTTCTAGAGGAAGTTCCCATTG
AGGAATTTTTCGAAAGTTGTGAAACGTTGGAGGAGGTAATTGATGAAAGA
TTGAATGTTACCATGGTTATGCAGTTTCTTTTGAAAGTCGGCGACGTTGA
GTTAACAAAATCTTTTATCGATAAGGTTATGGGAGCTGAAAAATATTCAG
GTAAATATTACGGcatcgaagaagaagaaatgataaaacctttaattaat
TTGTTGAAGGCTTTTCCATGGCAACCCCTTAGTGAGTCGGTTGAGACAGT
TATTAGTCATTGTCCAAAAGAACAGTATGAATTTTGGCTAGATGTGTTTT
CATCTACCGGTATCACTGAGATTGCACATAAAGTTCTTGCGATCAGTTTG
CAGAAAATGATGGATGATAAAAGATTCCTTCCGTTATGgttgaaaatatt
caagcttgtttttgaaaacgaagAATTTGGTAATCGTTGGTGGGATAAGA
TCATCTCCTGTGAAGATCTTGTCAACAAAGAATTCGATATCATTTCTCAT
ATTTGTTTGAATCTACCCATTGAAACAAACCCAGTAAAGTTTCCTTCTCT
TTTAACCGCTTTGGTGACTTCAATGACAACCGAGGACAACCCATATTGTG
TTAAGAGGTATGCGGAAAAGTTACTTGATGTTATCGCCAAAATCAAAGGG
AGTGAATTTTTCGAAAGTGCTCTCACTAATTTAAGTAATCAGCTTGTTTC
TGAAGGTCGTATCTCAACCTTGATAAAACTAGCAGAACTCTGTGCACCGA
AAGATCAACATTCTCGCCACAATGAAGAAGTTGTTAAACTATTTCTGGAA
GGGTGTTTTGATTGGTTATCAAAAGCAACTTTCGAAAGGAAACATATACA
AAGTGTTGTCGATATAGTTGTCCTTTTGAACCAGCACAAACAATTGTATA
ATGGTCCTATGATTGAGAAATACATAGAGTCGTGTCAGAAAATATCCGAT
CCTGATTTTATTTGTAATGTTGTCAACAAGTTATTTACCATGTCATGTTC
GTTTTACTTTCTCAAGCCGTTACTTCAATCACTTGCCAATTTGTTAAGCA
CCAAAACATTCACCGATCACAAAGCAATGTCTTCAACTATCAACCACATG
TTCATCCAAGGACCTGAGTTTGATCATCTATTGACTCTTCTGTTGACTAA
CGAAAAAATTCTCTCTTCCATTGATCTTCTCAATGAAATTCTACATTCAC
TTCTCAGCAAGGACGACAACATCGAACAATTGAAAACCAGTATCAATTTC
CATGGATTGTTGACCAGCTTCGTCTCTCTAATGCAACAACCGAATAACAC
AAACAAAGAATTTTCATCTCTCCGTCTGGTTCATGAATTTCTACTCAGCT
TAAGCGACGAATCTCCTTTACATCAACTGGTTCCTCAAATAATTGACACA
AGTTTGCTGAAAAACGATTTCCCTAAGTGTATACAATATCTATCCAAACT
TTCCATCCGTGAAACTGAGACATTCAAAACCTTCCTCACAACGACAATTC
ATGCTTTGGGAATCTTCCTCCGCCGATATAATACAATCATCGATGCTGAA
TACCAACTTATTTATGACTTCATAAAACTATTGCTTAAGAACGACCACTT
CACGCCCTTTGCTTTACAGCTTGCTTCGTTGAAAGACCTTACCAACAACG
ATTATAGAAACTTATATCATAACAATAAAGAAAGGTCCGTTCTGGAAAAT
CTTCTGGCTGCTTTCAAAAATCACCGCAACACCGATTTCTTTGCCGCCCT
CCAGCTCTCTCGCTCAAGGAGTTTGCAAATCTTGAAAGATTATGGTCCCC
CTAAATTCACCTGGGAGCAACCTGATGCGAATATCGATCACGCCAAAGTT
CAGGAGTTTCTCCGAAGTAAACGCGAAACAATCATATTGCGAACTTTCCG
ATCCTATAAAAGCGCTAATAACCGGATCAAAAAGCATAGTGGATATAACA
AAGACGGGAAATACAGTTTTACCGCCCAAATTCGTACCGCCAAAAACGGG
TGGAAGAGTTTAGTGGATGTTAAGAAAGGGCGTCACATTCACGAAGATAG
AGAGGAAAGATTTCAGAATCTTATAAATGAATTGGAAGAAAttcttgaaa
gtttgaaaatatcaaACGTTGAAAATCCATTAGCTGCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042346XLOC_042346Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067803-exon-scaffold_476-1491911889:184504..184614TCONS_00067803-exon-scaffold_476-1491911889:184504..184614Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1510915933:184504..184614TCONS_00067803-exon-scaffold_476-1510915933:184504..184614Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1575043694:184504..184614TCONS_00067803-exon-scaffold_476-1575043694:184504..184614Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1491911889:184771..185129TCONS_00067803-exon-scaffold_476-1491911889:184771..185129Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1510915933:184771..185129TCONS_00067803-exon-scaffold_476-1510915933:184771..185129Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1575043694:184771..185129TCONS_00067803-exon-scaffold_476-1575043694:184771..185129Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1491911889:185501..185521TCONS_00067803-exon-scaffold_476-1491911889:185501..185521Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1510915933:185501..185521TCONS_00067803-exon-scaffold_476-1510915933:185501..185521Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1575043694:185501..185521TCONS_00067803-exon-scaffold_476-1575043694:185501..185521Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1491911889:187101..187248TCONS_00067803-exon-scaffold_476-1491911889:187101..187248Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1510915933:187101..187248TCONS_00067803-exon-scaffold_476-1510915933:187101..187248Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1575043694:187101..187248TCONS_00067803-exon-scaffold_476-1575043694:187101..187248Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1491911889:188012..188110TCONS_00067803-exon-scaffold_476-1491911889:188012..188110Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1510915933:188012..188110TCONS_00067803-exon-scaffold_476-1510915933:188012..188110Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1575043694:188012..188110TCONS_00067803-exon-scaffold_476-1575043694:188012..188110Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1491911889:188506..191167TCONS_00067803-exon-scaffold_476-1491911889:188506..191167Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1510915933:188506..191167TCONS_00067803-exon-scaffold_476-1510915933:188506..191167Clytia hemisphaericaexon
TCONS_00067803-exon-scaffold_476-1575043694:188506..191167TCONS_00067803-exon-scaffold_476-1575043694:188506..191167Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067803-proteinTCONS_00067803-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_476supercontigscaffold_476:184504..191167 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.76333 4.58474 2.64565 2.68447 0.0066047 0.655432 1.08691 1.11171 0.00105184 0.561391 1.19207e-09 0.182872 0.673149 0 0.993484 0.401167 0.35977 1.22101 0.103022 0 6.60173e-09 0 2.29184 1.72686 0.435648 1.27139 8.39874e-06 0 0.00235871 1.45648
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067803 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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