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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068700 ID=TCONS_00068700|Name=TCONS_00068700|organism=Clytia hemisphaerica|type=transcript|length=3005bp
atagaaaacacgaaaattacaaaaacagAAAATGCAGATATCCGAGGTGC
TGAAACTATTCGATGCATCGCTCAGCCAGGAGCAGTGCTGGAGTATCGCT
TATGGTGTTTGTAAATCATTGCTGCTGAAGAAACGTGAAGACATTCAACG
TAAAGAAAGAATCAGATATATCCTAAGTCTGGATTCTCTAATCCTGACAC
AACGTGGTGAAATTGAGATTCTCCATTCTGAACCAAATCTCCATGAAATC
CAAAAAGAATCAGAATTGATTTTCTCTATTGGGAATTTGATTTGCAGATG
TCTTGATTTTGGATTAGATGAAGTGGATATCTGTGAAGTTCGCTTTCAAG
ATGACATGGCTGAGCTCATCGGAGGAATGGTGCTACAGAGCAATGAATTC
GATGAAGGAATAGGTGATACTGACAGCCTCGGTGAAAATTggagtgaaaa
caaaaaatccgATTCTTTACGAAGTTTCAAATCGTTGGTTGAAGTTTTAC
GATTCTGTGAAGCACGATTATTACGAAAGAATATCGAATGCATAGGAAAT
CATTACTCGAACGTATCGCAAGCTCTTTACTTAGAAGCATCTGAACTAAA
AGCATTCTTAGGGCATGTTTTGCACGATTTAGACACTTCCGAAAAACCGA
CAACTTATAGTTTCCAGACTAAAACGTACATAAAAGAGTGGGCTAAACTG
TGGATCGAAGTTATGGGTGAGGTAAGGCAGAAAACGAAAGAGATCAAAAC
ACAAACTGATGAATCAGCAGAAATTATCGCTCCAGAGACTGAATATTACA
AATGTACACCATTCACTAGAGAAAACTTAGAGAACACTGAAGAATTACAA
GCTTCGATCAAATCTTCGAAATCGCTTGATGATCTTGAAACACTCCCTGA
AGACGCTGAAAGCCGAatctttgattttctgaaaTCTAGAGTCTCAAGTC
ACGATGAGTTAAACACTTCACGATCCATGACTCCAGATAGCCTGGATGAC
CTAGATGATCTAGACTTTGAACCACAAACCAAAGTTCcgtcaaagaaaaa
gaaactcgGTGTCCATGATAAGTTAGTTAGAAAAATCTCCGATTGGGACC
AATATAGCTTGGATGACACNGGCATGTTTTGCACGATTTAGACACTTCCG
AAAAACCGACAACTTATAGTTTCCAGACTAAAACGTATATTAAAGAGTGG
GCTAAACTGTGGATTGAAGTTATGGGTGAGGTAAGGCAGAAAACGAAAGA
GATCAAAACACAAACTGATGAATCAGCAGAAATTATCGCTCCAGAGACTG
AATATTACAAATGTACACCATTCACTAGAGAAAACTTAGAGAACACTGAA
GAATTACAAGCTTCGATCAAATCTTCGAAATCGCTTGATGATCTTGAAAC
ACTCCCTGAAGACGCTGAAAGCCGAatctttgattttctgaaaTCTAGAG
TCTCAAGTCACGATGAGTTAAACACTTCACGATCCATGACTCCAGATAGC
CTGGATGACCTAGATGATCTAGACTTTGAACCACAAACCAAAGTTCcgtc
aaagaaaaagaaactcgGTGTCCATGATAAGTTAGTTAGAAAAATCTCCG
ATTGGGACCAATATAGCTTGGATGACACTTTAGAGAAAGACTTTTTGGAT
GGAAACTTCGAAACTAGTGATGATAAAAACACTGACAATAAAATTGATAC
TGAACTTGAGTTAGACGATTTTTCAGATTCAATGTCATCATTGAGAAGAT
TTACAGCACCTGTGCTATCCAGCCATAAGAaaaggatttcgaaaagtgaa
atGTGTTTACATCAAATAGACATTGATGAGATAACCACAGAGAATTTCGA
GCAAGAAGATTTATGCAAAGTTGGTGCAAGCTTGACTGAGATCTTCAAAA
TCAGACAAGAACTGACCAGAGCGGAGTTACAGTTCAGTCAAGATCAGGAT
GtgttaaaacagaaaaaatgtttcgGTTGCCACAAAAACAAATTCACATT
TTTCCAACGAGCTAGAATGTGCGCTGTATGTAAGAAGAAATACTGCATCA
ACTGTTTGACAGAAAACGTTCCAATTCCGCCATCTTTAACCGAAACTCTT
CCTCCCAATGTTGACGTCACATATAATGCAAATCAACCGTCTTCCAACCT
TGTACGGTCTAAAAGTATGCTCCATGTTGGACCCTCTACAACAATCAAAC
AGTTACCATGGCAAAGAGACGCTAAAGTGAAAGGTGTTCGACTGAGCATG
TGCAATGAATGTCATGTGTTTGTGGACAGTATTAAGAAAGAGCGAGAAAG
AATCGAGTGGAAAGTCCAACTGGACTTAGATTTGTAAACTTttgtttttc
actttctttaGAAAGTAATAACTCACCCTTTTTTCCCAGCTgtaacacaa
cgttgtttcaacgttcctctaacgtcaaatggacgttgtgaacattacat
ggacgttgaaacaacattgtgtgccagctgggatgggatagttacttgat
tttttttgaagatttgaatAACAGGCTGGTACTGTTTTGTAAATTGCAAA
TCTTCTATGTTTCAGTAAAGGGGCCGGGGATGGACTTTATTAACCCCCAT
CAATCTTGAACTTGAGTATTGTGTTCTTCATTTGAGCCATATCATTCTTT
GTGTGTTTACCCTTTTGTAAATAGCTTAGTTtcgtgaaatttttaaaatg
catattttttatttcattcataTTCGAATTATTTATGACGCATGACAAAA
GATGAATTTATCccattattttaattttgaagatttatcaaaataaataa
tttgaaaaaaataatgaaaatattattCTTTCTTCGAAAAATCCTCGAAA
AAATCCATCCTCCAAACAGGCTAAAAGAAGAATCGCTTTAACTTCAGTCA
GGATGTTGTAATGGAGGTATTCTTATAGTGCCCAAACCTGATTTCTATCC
ATTTTGATCCATGTTGATTCCCTCAGACCCTTTATGTTGAGTTTTCCCAA
TCTCA Run BLAST on NCBI protein sequence of TCONS_00068700-protein >TCONS_00068700-protein ID=TCONS_00068700-protein|Name=TCONS_00068700-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
MGEVRQKTKEIKTQTDESAEIIAPETEYYKCTPFTRENLENTEELQASIK
SSKSLDDLETLPEDAESRIFDFLKSRVSSHDELNTSRSMTPDSLDDLDDL
DFEPQTKVPSKKKKLGVHDKLVRKISDWDQYSLDDTLEKDFLDGNFETSD
DKNTDNKIDTELELDDFSDSMSSLRRFTAPVLSSHKKRISKSEMCLHQID
IDEITTENFEQEDLCKVGASLTEIFKIRQELTRAELQFSQDQDVLKQKKC
FGCHKNKFTFFQRARMCAVCKKKYCINCLTENVPIPPSLTETLPPNVDVT
YNANQPSSNLVRSKSMLHVGPSTTIKQLPWQRDAKVKGVRLSMCNECHVF
VDSIKKERERIEWKVQLDLDL Run BLAST on NCBI transcript from alignment at scaffold_487:48772..54683- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068700 ID=TCONS_00068700|Name=TCONS_00068700|organism=Clytia hemisphaerica|type=transcript|length=5912bp|location=Sequence derived from alignment at scaffold_487:48772..54683- (Clytia hemisphaerica)
ATAGAAAACACGAAAATTACAAAAACAGAAAATGCAGATATCCGAGGTGC
TGAAACTATTCGATGCATCGCTCAGCCAGGAGCAGTGCTGGAGTATCGCT
TATGGTGTTTGTAAATCATTGCTGCTGAAGAAACGTGAAGACATTCAACG
TAAAGAAAGAATCAGATATATCCTAAGTCTGGATTCTCTAATCCTGACAC
AACGTGGTGAAATTGAGATTCTCCATTCTGAACCAAATCTCCATGAAATC
CAAAAAGAATCAGAATTGATTTTCTCTATTGGGAATTTGATTTGCAGATG
TCTTGATTTTGGATTAGATGAAGTGGATATCTGTGAAGTTCGCTTTCAAG
ATGACATGGCTGAGCTCATCGGAGGTAAGGCTGAAAAAATTCATTTTATT
ATTTTCTTAGAGTTCTTTAGAATTGAGTTAGTACGCCCTAGCTGCCACAT
GACGTCAAAAAAAACGACCATATAGCGTCAGTTAAACGCCAGATGAACGT
CGTGTGTCAGTCTTTTTGGAATGCGCTTGAGCTTGAAGTAAAACTTTTTA
CTAAACACCCCTATATCAAATACCGCATTCTAGTAAATCAAACATGATTA
GTACTAAGGCTGGAGTAGGAAGCTTGCATACAATGGTATGTAATGATAAA
GGCGACCCATTTTCTCAAATTTTTGTATTGACAGTGGCTGCCAAACGGTT
GGAAAGTCTAATCAAATAATGTATTGTGGAGATCAATGGGTTACCAATGT
TATATGTGATTAGATTACTCCTACTTATAATCACTCCTAATGGACTTTAT
AAACAAATTTAATTGAACAGCCATAGAATTAAATATTTCTTGATAAATTT
TGATTGAAACAGTACTAGTTATTTTGTATCTGCATAGAGTTCACAAATTT
CCTCAAAATTCAATTAAAAGTGAAACGATAATTTCTTTATTTTTGATTTT
CTTTCGATATACTTCGTTTGCATTTGAATACTTTGTTTGAATACTAGGCC
ATAGAATCAAAACCTTAATCGATAGGAGAACAACAGATTTGCAGGATCAA
GTCCAGGACGACCTTTCATAATTTGGATTGTCAAGAAAAAAAATTCTTTC
GAATTCACTCGAAATTTGCTCAAACTGAAAAGTCTATTCTGAACCTTGAA
GTTGTAGATTTAAGAAGTTCGAATTAGAGAGGTTTGACTACTCTACAACA
CACCTCATTACAGCGGAAGGTGGGCGAGAAATCTCGTTCCAATTCAATCA
TTGTCCTCTTTAAAACCAACTTAAGGTTCATTACATAATTTCCGTTTGCT
GACCAACTTGTCAATTCCACTGGACATTCTTCACAAATAGTTAGAGATGC
TTTTTTCACAGAAATAATCCTGTTTGTTAATCCATTTTGAATTGGTAAAA
AGGAAATCGAATGTAACGGTCTTCATCCTGTTTACTTGTCAATTAAAATG
CTGTATTTAGCCGGCCGGGTGGGATGGGTTCTGTCAAGATAATCGAAGGC
TATCCTATTTGTAAAGATTCAAGAATTTTTAACCAACATTCAGTGCCTTT
CTGCCTTTTACTCCTTTTCCAGTAAAAACCTATTTTCTTATTCTCAATAC
CGTCGATTTTAAATAGCTTTGACTATCTTATAATTTCGAAATTTTAATAC
AGTTAAGGAAAGGTTTGCCCGAAGATTCCCTGCTTTTATGGAAAGTCGGC
TTACTGAGTGAAAAATGAAACCGTAAAAATCAATTCCTAGTGAAAATTAT
TATTCTAAGAATTTCGGAATTTTGGACTTTCAGAACCTTGGGTCGTGAAC
ATTAAAATGAAACAGAGGTGTCGATAAAATTTCTACAAACCAATTTTCAC
AAAATGTTGTTTTTTTTCAAACTGTGTTTTGACAGACGATAACAATCCTT
AGAAAATTACAGTAGGTATTAAGTATCATTGATATTGTTTAATTTGTTTA
TCATTAAAAACGCGTGGGAAGGGATCATGATCAATTTCTACAAAACGAGG
GATTTCCGGAATATGGACAGACCGATAGACGAAATATGCTACTCCGGATA
AAACACCGGATTAATGACTTTTCGATGTTTGTCACCTGTGCTCAGCTTAA
TTAAGTGGCATATCAAGCAAGCTATTTCTCCTGACTTCAATAACAAGAAT
TACTAGTAATAAAGAACATCGTAGCTTCATTCACTTACTAATAAGCATCG
TATTCTTTTACCTACTTGGCCTTCTTTAAACGCGTTATTCAAAGGGCAAA
CTTATTTTACAAGATCGAATTTAAGCTCTGTCTGTTGGAATACTGTTTAT
GTCTGTCAGTCCGTAGATAGCAATATATAAATAAATAGTTTGCATACGAT
AAATCATTTTACTGCATTACTTAGCAGAAAGCTATGCAGCTCACTCAGCA
AGTCAAATGACACAAAAGAGGACAATCATCCTGCTGTCTCGTTGAGACTG
AGAAATAAATAAAATGGAGAAAACCCACATAATTTCGATCCTATATTACT
CATTTTTGACAACAACTTCGTAGTTAATCCAATTTTCACAAAAGAGAAAT
AGGAGGATTCAAACATTATTGCACATCCCGTTAAATCGAATGCTAATTAA
TGAAATGTCACAGATTTTTCATAAGAAATATTAAAATTCAAACACTCATA
CCAACACAACAAATTTTTCTCAGACTCGGAAATATAGATTCCAAAAGCTC
TATTGTTCTTGAAATCTGTCCTAGTTTATNCACCACATTACTTAGCAGAA
AGCTATGCAGCTCACTCAGCAAGTCAAATGACACAAAAAGAGGACAATCA
CCCTGCTGTCTCGTTAAGACTGAGAAATAAATAAAATGGAGAAAACCCAC
ATAATTTCGATCCTATATTACTCATTTTTGACAACAACTTTGTAGTTAAT
CCAATTTTCACAAAAGAGAAATAGGAGGATTCAAACATTTTCAGTAAAAG
GATTCAAACATGATTACACATCCCATTAAATCAAATGCTAATTAATAAAA
TGTCACAGATTTTTCATAAGAAATATTAAAATTCAAACACTCATACCAAC
ACAACAAATTTTTCTCAGACTCGGGAATATAGATTCCAAAAGCTCTATTG
TTCTTGAAATCTGTCCTAGTTTAACATCTTGCTTTAACGAGGAATTTCAT
ATAAGAACTATTGCCAAACTTTTTATCGTGATGAAAAACTGTTGTCAAAA
TTTCCTAATAGAACTTTAAAGCCAATTCTTTTAACTAACTCTATTGATCC
TTTATATAATTTTCTCTTTCGTTTAATTCAGGAATGGTGCTACAGAGCAA
TGAATTCGATGAAGGAATAGGTGATACTGACAGCCTCGGTGAAAATTGGA
GTGAAAACAAAAAATCCGATTCTTTACGAAGTTTCAAATCGTTGGTTGAA
GTTTTACGATTCTGTGAAGCACGATTATTACGAAAGAATATCGAATGCAT
AGGAAATCATTACTCGAACGTATCGCAAGCTCTTTACTTAGAAGCATCTG
AACTAAAAGCATTCTTAGGGCATGTTTTGCACGATTTAGACACTTCCGAA
AAACCGACAACTTATAGTTTCCAGACTAAAACGTACATAAAAGAGTGGGC
TAAACTGTGGATCGAAGTTATGGGTGAGGTAAGGCAGAAAACGAAAGAGA
TCAAAACACAAACTGATGAATCAGCAGAAATTATCGCTCCAGAGACTGAA
TATTACAAATGTACACCATTCACTAGAGAAAACTTAGAGAACACTGAAGA
ATTACAAGCTTCGATCAAATCTTCGAAATCGCTTGATGATCTTGAAACAC
TCCCTGAAGACGCTGAAAGCCGAATCTTTGATTTTCTGAAATCTAGAGTC
TCAAGTCACGATGAGTTAAACACTTCACGATCCATGACTCCAGATAGCCT
GGATGACCTAGATGATCTAGACTTTGAACCACAAACCAAAGTTCCGTCAA
AGAAAAAGAAACTCGGTGTCCATGATAAGTTAGTTAGAAAAATCTCCGAT
TGGGACCAATATAGCTTGGATGACACNGGCATGTTTTGCACGATTTAGAC
ACTTCCGAAAAACCGACAACTTATAGTTTCCAGACTAAAACGTATATTAA
AGAGTGGGCTAAACTGTGGATTGAAGTTATGGGTGAGGTAAGGCAGAAAA
CGAAAGAGATCAAAACACAAACTGATGAATCAGCAGAAATTATCGCTCCA
GAGACTGAATATTACAAATGTACACCATTCACTAGAGAAAACTTAGAGAA
CACTGAAGAATTACAAGCTTCGATCAAATCTTCGAAATCGCTTGATGATC
TTGAAACACTCCCTGAAGACGCTGAAAGCCGAATCTTTGATTTTCTGAAA
TCTAGAGTCTCAAGTCACGATGAGTTAAACACTTCACGATCCATGACTCC
AGATAGCCTGGATGACCTAGATGATCTAGACTTTGAACCACAAACCAAAG
TTCCGTCAAAGAAAAAGAAACTCGGTGTCCATGATAAGTTAGTTAGAAAA
ATCTCCGATTGGGACCAATATAGCTTGGATGACACTTTAGAGAAAGACTT
TTTGGATGGAAACTTCGAAACTAGTGATGATAAAAACACTGACAATAAAA
TTGATACTGAACTTGAGTTAGACGATTTTTCAGATTCAATGTCATCATTG
AGAAGATTTACAGCACCTGTGCTATCCAGCCATAAGAAAAGGATTTCGAA
AAGTGAAATGTGTTTACATCAAATAGACATTGATGAGATAACCACAGAGA
ATTTCGAGCAAGAAGATTTATGCAAAGTTGGTGCAAGCTTGACTGAGATC
TTCAAAATCAGACAAGAACTGACCAGAGCGGAGTTACAGTTCAGTCAAGA
TCAGGATGTGTTAAAACAGAAAAAATGTTTCGGTTGCCACAAAAACAAAT
TCACATTTTTCCAACGAGCTAGAATGTGCGCTGTATGTAAGAAGAAATAC
TGCATCAACTGTTTGACAGAAAACGTTCCAATTCCGCCATCTTTAACCGA
AACTCTTCCTCCCAATGTTGACGTCACATATAATGCAAATCAACCGTCTT
CCAACCTTGTACGGTCTAAAAGTATGCTCCATGTTGGACCCTCTACAACA
ATCAAACAGTTACCATGGCAAAGAGACGCTAAAGTGAAAGGTGTTCGACT
GAGCATGTGCAATGAATGTCATGTGTTTGTGGACAGTATTAAGAAAGAGC
GAGAAAGAATCGAGTGGAAAGTCCAACTGGACTTAGATTTGTAAACTTTT
GTTTTTCACTTTCTTTAGAAAGTAATAACTCACCCTTTTTTCCCAGCTGT
AACACAACGTTGTTTCAACGTTCCTCTAACGTCAAATGGACGTTGTGAAC
ATTACATGGACGTTGAAACAACATTGTGTGCCAGCTGGGATGGGATAGTT
ACTTGATTTTTTTTGAAGATTTGAATAACAGGCTGGTACTGTTTTGTAAA
TTGCAAATCTTCTATGTTTCAGTAAAGGGGCCGGGGATGGACTTTATTAA
CCCCCATCAATCTTGAACTTGAGTATTGTGTTCTTCATTTGAGCCATATC
ATTCTTTGTGTGTTTACCCTTTTGTAAATAGCTTAGTTTCGTGAAATTTT
TAAAATGCATATTTTTTATTTCATTCATATTCGAATTATTTATGACGCAT
GACAAAAGATGAATTTATCCCATTATTTTAATTTTGAAGATTTATCAAAA
TAAATAATTTGAAAAAAATAATGAAAATATTATTCTTTCTTCGAAAAATC
CTCGAAAAAATCCATCCTCCAAACAGGCTAAAAGAAGAATCGCTTTAACT
TCAGTCAGGATGTTGTAATGGAGGTATTCTTATAGTGCCCAAACCTGATT
TCTATCCATTTTGATCCATGTTGATTCCCTCAGACCCTTTATGTTGAGTT
TTCCCAATCTCA Coding sequence (CDS) from alignment at scaffold_487:48772..54683- >TCONS_00068700 ID=TCONS_00068700|Name=TCONS_00068700|organism=Clytia hemisphaerica|type=CDS|length=1116bp|location=Sequence derived from alignment at scaffold_487:48772..54683- (Clytia hemisphaerica)
ATGGGTGAGGTAAGGCAGAAAACGAAAGAGATCAAAACACAAACTGATGA
ATCAGCAGAAATTATCGCTCCAGAGACTGAATATTACAAATGTACACCAT
TCACTAGAGAAAACTTAGAGAACACTGAAGAATTACAAGCTTCGATCAAA
TCTTCGAAATCGCTTGATGATCTTGAAACACTCCCTGAAGACGCTGAAAG
CCGAATCTTTGATTTTCTGAAATCTAGAGTCTCAAGTCACGATGAGTTAA
ACACTTCACGATCCATGACTCCAGATAGCCTGGATGACCTAGATGATCTA
GACTTTGAACCACAAACCAAAGTTCCGTCAAAGAAAAAGAAACTCGGTGT
CCATGATAAGTTAGTTAGAAAAATCTCCGATTGGGACCAATATAGCTTGG
ATGACACTTTAGAGAAAGACTTTTTGGATGGAAACTTCGAAACTAGTGAT
GATAAAAACACTGACAATAAAATTGATACTGAACTTGAGTTAGACGATTT
TTCAGATTCAATGTCATCATTGAGAAGATTTACAGCACCTGTGCTATCCA
GCCATAAGAAAAGGATTTCGAAAAGTGAAATGTGTTTACATCAAATAGAC
ATTGATGAGATAACCACAGAGAATTTCGAGCAAGAAGATTTATGCAAAGT
TGGTGCAAGCTTGACTGAGATCTTCAAAATCAGACAAGAACTGACCAGAG
CGGAGTTACAGTTCAGTCAAGATCAGGATGTGTTAAAACAGAAAAAATGT
TTCGGTTGCCACAAAAACAAATTCACATTTTTCCAACGAGCTAGAATGTG
CGCTGTATGTAAGAAGAAATACTGCATCAACTGTTTGACAGAAAACGTTC
CAATTCCGCCATCTTTAACCGAAACTCTTCCTCCCAATGTTGACGTCACA
TATAATGCAAATCAACCGTCTTCCAACCTTGTACGGTCTAAAAGTATGCT
CCATGTTGGACCCTCTACAACAATCAAACAGTTACCATGGCAAAGAGACG
CTAAAGTGAAAGGTGTTCGACTGAGCATGTGCAATGAATGTCATGTGTTT
GTGGACAGTATTAAGAAAGAGCGAGAAAGAATCGAGTGGAAAGTCCAACT
GGACTTAGATTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068700-exon-scaffold_487-1575043694:54310..54683 | TCONS_00068700-exon-scaffold_487-1575043694:54310..54683 | Clytia hemisphaerica | exon |
| TCONS_00068700-exon-scaffold_487-1575043694:48772..51402 | TCONS_00068700-exon-scaffold_487-1575043694:48772..51402 | Clytia hemisphaerica | exon |
| TCONS_00068700-exon-scaffold_487-1510915933:54310..54683 | TCONS_00068700-exon-scaffold_487-1510915933:54310..54683 | Clytia hemisphaerica | exon |
| TCONS_00068700-exon-scaffold_487-1510915933:48772..51402 | TCONS_00068700-exon-scaffold_487-1510915933:48772..51402 | Clytia hemisphaerica | exon |
| TCONS_00068700-exon-scaffold_487-1491911889:54310..54683 | TCONS_00068700-exon-scaffold_487-1491911889:54310..54683 | Clytia hemisphaerica | exon |
| TCONS_00068700-exon-scaffold_487-1491911889:48772..51402 | TCONS_00068700-exon-scaffold_487-1491911889:48772..51402 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_487 | supercontig | scaffold_487:48772..54683 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00068700 vs. Swiss-Prot (Human)
Match: SPIR2 (Protein spire homolog 2 OS=Homo sapiens GN=SPIRE2 PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 9.326e-19 Identity = 92/324 (28.40%), Postives = 149/324 (45.99%), Query Frame = 2
Query: 32 MQISEVLKLFDASLSQEQCWSIAYGVCKSLLLKKREDIQRKERIRYILSLDSLILTQRGEIEILHSEPNLHE--------IQKESELIFSIGNLICRCLDFGLDEVDICEVRFQDDMAELIGGMVLQSNEFDEGIGDTDSLGENWSENKKSDSL-RSFKSLVEVLRFCEARLLRKNIECIGNHYSNVSQALYLEASELKAFLGHVLHDLDTSEKPTTYSFQTKTYIKE--------WAKLWIEVMGEVRQKTKEIKTQTDESAEIIAPETEYYKCTPFTRENLENTEELQA-SIKSSKSLDDLETLP---EDAESRIFDFLKSR 940
+ + EVLK ++ L++EQ W++ + C+ L R R+ R D+ L RG+ + EP E E++ + S+G I R LD+GLDE + E + LI M +E D G G D E ++++ + RS ++ + +R C ARL + HY V +AL++E EL+AFL V + +K +T E WA+LW+++M E+R+ K K Q E P ++ TPF E L ++++A + K K + D + P +DA I DF++SR
Sbjct: 22 LSLEEVLKAYEQPLNEEQAWAVCFQGCRGL----RGSPGRRLR-------DTGDLLLRGDGSVGAREPEAAEPATMVVPLASSEAQTVQSLGFAIYRALDWGLDESE--ERELSPQLERLIDLMANNDSE-DSGCGAADEGYGGPEEEEEAEGVPRSVRTFAQAMRLCAARL--TDPRGAQAHYQAVCRALFVETLELRAFLARVREAKEMLQKLREDEPHLETPRAELDSLGHTDWARLWVQLMRELRRGVKLKKVQEQE----FNPLPTEFQLTPF--EML--MQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSR 321
The following BLAST results are available for this feature:
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