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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068780 ID=TCONS_00068780|Name=TCONS_00068780|organism=Clytia hemisphaerica|type=transcript|length=610bp
AAGATTAGACTTACTTAGCAGCTTCACTGGATTAAACGAAGCAGATACGA
TTTGTCAACATCACAATCAATACGGACTGCTTTCACTAAACTCAAGAGGT
GAACAGCTGTGCCACCGCCAATGTTACCGATTGTTATCATTATGTATGAG
CTGTTCGGGGAGAGCGTGTTGCTTTAGAGTcacaaagaagaaaataagag
ccacttttttattaaatttaacaATGTATAAAATGATATATGCTACGGAA
TACATACGTCATTAATCAAAAAAGTGGCCAACAAATAAAAATGAGGCCAT
TGatcattaaaatcaaattaataaaatatAGAGTGTAACTTCGTTGGTCT
TTCTTTTTGGTTTCTCTTTCATTCTGGGCGTTGTTTTCATTCTCCCAAAC
ACACACACCACTGTCAATgccgccccggtggagctttttccTTCAGTGTA
GATGGAAATTTCTATCTAATCGTAGTCACAGTGATCTTGCGTTGGAACAT
ttgtaaaatcgggattattttggctaatatcccttgtatctccttaagta
gtgcttataaggagatgaaatttggtatataaagtctccttatagcaatg
taaaagtagg Run BLAST on NCBI transcript from alignment at scaffold_49:369511..370487+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068780 ID=TCONS_00068780|Name=TCONS_00068780|organism=Clytia hemisphaerica|type=transcript|length=977bp|location=Sequence derived from alignment at scaffold_49:369511..370487+ (Clytia hemisphaerica)
AAGATTAGACTTACTTAGCAGCTTCACTGGATTAAACGAAGCAGATACGA
TTTGTCAACATCACAATCAATACGGACTGCTTTCACTAAACTCAAGAGGT
GAACAGCGTAAGTTACATTGTTTGTATGAAACAATTATCTCATATGTTGA
AATCTAGATGGATTTTGTGCTTCCCATCAATTAGTGTGCGTTACTTGTCA
CCGTAACTTCGGCAATTTATCGACCGACTCTTGAGCGACGCTCAATTTGT
CTAGTTTCAAGCTTAACAAAATCTACCTTACCACTAGCCTcgatccctgc
gtattatcatcGTTTTGATTCTTACTGGTAGCGCTAGATagaccagggta
ttctctggcctCAATTTAGCAagaacgtaaataaagcctgggatacacag
gGACAATGTTGCCGTACCACCCACGGATCTTTACACTCATATAATAGtaa
ctttaattttcattatttatttAGTGTGCCACCGCCAATGTTACCGATTG
TTATCATTATGTATGAGCTGTTCGGGGAGAGCGTGTTGCTTTAGAGTcac
aaagaagaaaataagagccacttttttattaaatttaacaATGTATAAAA
TGATATATGCTACGGAATACATACGTCATTAATCAAAAAAGTGGCCAACA
AATAAAAATGAGGCCATTGatcattaaaatcaaattaataaaatatAGAG
TGTAACTTCGTTGGTCTTTCTTTTTGGTTTCTCTTTCATTCTGGGCGTTG
TTTTCATTCTCCCAAACACACACACCACTGTCAATgccgccccggtggag
ctttttccTTCAGTGTAGATGGAAATTTCTATCTAATCGTAGTCACAGTG
ATCTTGCGTTGGAACATttgtaaaatcgggattattttggctaatatccc
ttgtatctccttaagtagtgcttataaggagatgaaatttggtatataaa
gtctccttatagcaatgtaaaagtagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068780-exon-scaffold_49-1491911889:369511..369617 | TCONS_00068780-exon-scaffold_49-1491911889:369511..369617 | Clytia hemisphaerica | exon |
| TCONS_00068780-exon-scaffold_49-1510915933:369511..369617 | TCONS_00068780-exon-scaffold_49-1510915933:369511..369617 | Clytia hemisphaerica | exon |
| TCONS_00068780-exon-scaffold_49-1575043694:369511..369617 | TCONS_00068780-exon-scaffold_49-1575043694:369511..369617 | Clytia hemisphaerica | exon |
| TCONS_00068780-exon-scaffold_49-1491911889:369985..370487 | TCONS_00068780-exon-scaffold_49-1491911889:369985..370487 | Clytia hemisphaerica | exon |
| TCONS_00068780-exon-scaffold_49-1510915933:369985..370487 | TCONS_00068780-exon-scaffold_49-1510915933:369985..370487 | Clytia hemisphaerica | exon |
| TCONS_00068780-exon-scaffold_49-1575043694:369985..370487 | TCONS_00068780-exon-scaffold_49-1575043694:369985..370487 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:369511..370487 + |
Blast
The following BLAST results are available for this feature:
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