TCONS_00069346 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069346
Unique NameTCONS_00069346
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1625

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069346 ID=TCONS_00069346|Name=TCONS_00069346|organism=Clytia hemisphaerica|type=transcript|length=1625bp
CTCGCCCGATTTCGTTTCCAAGAGCACTTCCGAAAACAATATGGCCGCcg
aaaagtttagaaaaaaatgaccggtGGAAACTCTTGAATCAAAGGGTCAA
AAGATCACTTCCTTATTCAATTGCTTGTCACTTCCATAAAGCagATGCTG
CTATGGAAACTATATCACCCGACCACCAGGTTATCGTAAGCACACCACCA
CCGCTAACCACTCCATTTAACTTATCAATCAACTCCAACACACACCAGCA
TATTCTGCCACCCATCAAAAGTCTACCATCTTGGAATCGCCATCGTATTG
GTTTAGCTAAACCTTGTAATCCAATAATCtctaaaaacattgaaaatttt
aatacaGGATCCATCAGAAGTGTACCTTTAACTAAACAGTCTGTACTCTC
AGAACAGTGTACTCAAACTTCAGCACAGTCCTCTCGGCAATCTTCCAGCT
CTTCTCTAAGTTCAAATAAGCAGACACCGCCGCGAACGTCTGGAAGCAGT
AGGAAACACGATCTAAAATCACTTTATGACAAGAAAATTGTCTTTCTCCA
AACGTCACATGGTGAAGTGCTTGGCAATTTGCAAGAAGAAGTTGATCAAT
TAAAACTAGAAAATAAAGGTTTACAATTTAATCTAGTTATGACGAAAGGC
AACTTGGATAAATTGAGTAAATCACTTTCAAACAGTCCTCATGGATCATC
AACTAATAATGATAACAATGAGTTGAAACTGGTGCGTAAAGTAAAATCTT
TGGAAAAAGAACTTCACAATGTCAAAACGGAATTGAATTTGGCGAGAGAC
CAGAATAAAGAACTAATGGAACTTGTACAGCAaagtcaaaatcatgaaat
tagGCCTAAATCGTCGATCAAGTTCAATAATaagaaaacgttgaaaaagA
GTGCCACTACATCACGTCTACCAGCAAACTATCATAAGAAGATCTCTCCA
CGTGCTAGTTACCAGACCTTTGAGAATGACTCAAAAGAAAACGAGGTTGG
TTGTCTTTCGGACAGGTGTAATCAAAACACCAATTTCACTTTACCCATTA
TTCAAAGCAATCGACGAAAACTGTCTGGTCgtaacaacaataacaaaaaa
tcaCGTGACTCCGATGAACCAATCACATTGCCCATTTTACAACCGTTTCC
ACATCCAAATAACAATTATTCGTTGAGATGTAAACGAACCAAAGCTGTTC
AAATGCAGAACAAACGGCCTCAAAAAGACCTCTCGTTGTCTCTTTTATCC
AAACAAAATTTTATGACGCAGTAACTTTGTTGGTCTCGTTCACTCGAATT
TCAACGATTCAACatgtatttgacgtcaatcattttctaaaaaaatttgt
CATAAACGTATTAAAAATGTGTGCTGGTATTATAAAATTGCAGATTATGA
CAAAAAAGACTATTGcaaaactttatagaaaaaaaacaatgaaattgaac
tgtattatttttttggtcCCCATATTTTACTTATCAcatttttaatttct
atttttaatatttttttacaaaacaatAACGTGTACATATTATACTAAAA
AATCATTAGAGAAATGAATTAATTTACAGaacaaaaaataactttaatga
GCTATATGGAAAATTCATCTTGCGT
Run BLAST on NCBI

protein sequence of TCONS_00069346-protein

>TCONS_00069346-protein ID=TCONS_00069346-protein|Name=TCONS_00069346-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
RPISFPRALPKTIWPPKSLEKNDRWKLLNQRVKRSLPYSIACHFHKADAA
METISPDHQVIVSTPPPLTTPFNLSINSNTHQHILPPIKSLPSWNRHRIG
LAKPCNPIISKNIENFNTGSIRSVPLTKQSVLSEQCTQTSAQSSRQSSSS
SLSSNKQTPPRTSGSSRKHDLKSLYDKKIVFLQTSHGEVLGNLQEEVDQL
KLENKGLQFNLVMTKGNLDKLSKSLSNSPHGSSTNNDNNELKLVRKVKSL
EKELHNVKTELNLARDQNKELMELVQQSQNHEIRPKSSIKFNNKKTLKKS
ATTSRLPANYHKKISPRASYQTFENDSKENEVGCLSDRCNQNTNFTLPII
QSNRRKLSGRNNNNKKSRDSDEPITLPILQPFPHPNNNYSLRCKRTKAVQ
MQNKRPQKDLSLSLLSKQNFMTQ
Run BLAST on NCBI

transcript from alignment at scaffold_498:118730..140038-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069346 ID=TCONS_00069346|Name=TCONS_00069346|organism=Clytia hemisphaerica|type=transcript|length=21309bp|location=Sequence derived from alignment at scaffold_498:118730..140038- (Clytia hemisphaerica)
CTCGCCCGATTTCGTTTCCAAGAGCACTTCCGAAAACAATATGGCCGCCG
AAAAGTTTAGAAAAAAATGACCGGTGGAAACTCTTGAATCAAAGGGTCAA
AAGATCACTTCCTTATTCAATTGCTTGTCACTTCCATAAAGCAGGTTGTT
ATTTTTTGTTTTACATCTGATTATTTCACTTTAGTACTATATATTAGGGT
ATATAGCTGTACTGTACTATTAAAGCTAAAAAAAATCATCATGATCAGAT
AGAGATGGGTCTGAAATAAAAGTTTATTCGTACAGACTGACAGACTGTCG
TCTCTAAAAAAAGATTTGGTTTTTGGGTACATCTCCAAAATCTATTAAGA
AATTGCCATCCATTTTTCTCTCTTTTTAAAGAAAAGGCAGAAAAAAGTTT
GTAGCTACTACAGTACAGTACAGGAAGATTTATTATTAAAACACCTTGCT
TAGGATCAAGCCTTTTAGTGTTCTCATTTGGATCTGTGCATAGTTTCCTG
TTTGTTTTATTTTGTGGGTAAAATCTAGTCAGTTTATTATAGGAACAGGT
AACCTGAGCTGAGCTGAGATCAGATTATTGTGAATATGTTTGTTGTGTGC
ATGCAGCTCTGAAGGGACGTGTGAAAACAAACAATCTGACGGCTAGTTCG
AAACGCAGGTCACAGGTCACAGGTCAACAGGTCACAGGTCACAGGTCAAC
AAAGTGCAGACCGGAAAAAAGATAATAAGATCATAANNNNNNNNNNNNNN
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NNNNNTAAATTACAAAAAAGTAATACATGTTATTTAGATATTATAAAATG
ACAATTGAATAAAATAACAACCTAGTGACACTTACTTACAAAAATAATGA
CAAAATCTTAAAATATGATGCCTAACGAGACAAAAACACGAAAAATATTT
ATAATACAGAATGTGATGTTGATAGTGTGAATGGATATAAAACGGCACCA
ATCAGAAGCTTGTGAGGTCNAACATCACTGACCTGTGACCTGTGACCTGT
TGACCTGTGACCTGTGACCTGCGTTTCGAACTAGCCGACAATCTGACGAA
TATGCAATTTCAAAATCGTATGGACCACGTTCGTCTTAAAGGACTTTGAA
TGACAACAAAGTTGCGTGATTGTGTTTATGTATGACGGGAGGACTATTTT
CCAGATGTTTAATTTTCAAGCGCCTTTAGGAGGTTTACCATGCACATGAG
AAAATTATGAAGAACAGTTGTTACCATTAACTGCTCTAACTCGGGACTAT
CTAATCTGACAAAACATGGGACTGCAATTCGGCCACCATTTCACCAAACC
TCCAAAGTCATTTGATTTGAGTTATGAACGGCGTATTAAAAAATACACAA
TTTCTCTTGGGTAACGTGTATCAGTGCAAACATGCATAGCCCTCAAATGA
ATGACCTGTCTTATCATTAAAATACAAAGTTAAATTAAAACAAAAATGGT
TGAGTAGAGCTGCGAGGGGAGCAGTTGTATTTTAATGACCAGACAAGTCA
TTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCAAT
CTCACGGTAGGATGAGGATGCATCTAATCAGATCCTAGTATTTTTCCTGC
AGTCAAAACGACAATTTGTCGTTTCTGCAATTTGTTTGATAAAATAATGC
GTTCCAAACAAAGAGAAAAAGTTTACGATTTAAATAAGGTATATACTTTT
AAAAATACTTTTATTGTCTTGGGAATACCTTAAGGGAAGAAATTTTCACG
GGAACTTAATTTCGTGGTTGGTCAAATTATTTTTTTTCGCGGGAATTTAA
TTTCGCGGTTCAGCGATTTTTGAAAAATTCGCGGGAATTTAATTTCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNTAAAATTTCGCGGGAACTTAATTT
CGCGGTTTTAGGCAAAATCCGCGAAAACCGCGAAATTTTCTTCCCGCGAA
AATTTCTTCCCTTAAGGTACAAAAAGTCTTTGGCAAAGGCAAGCATGTTT
GTACCAAGTTTGTTTGCAACTAAAATAAAACTCATAGTATACATCTTTTT
TAAAGTCAAAATTATACAATTATCTTAGGGGCCGTCCACATAGTACGTAC
GCATTAAGAAGGGGAGGGGGAGTCTTCTCAAAAGCATATGCTTGCATACA
GGGGGAGGGGAGGGGTCAAAGGAAAATGTACGCACGCAGAGAAAAATTGT
TTTTTTGTTGATTTTTACGCTTCTTGTACGCATCAAGGAAAAGAAAAAGT
TTCTTAATAAAAATTGAGTTTCGTGTATGAAATAAAGGTTCGAACCAAAC
GATTTGAATCCAAAAATTTCTTCAACCAAGGGGGGGGGGGGTGAAAAATA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCGATTTTCGACATTT
TAGTGCGTACGTACTATGTGGACGGCCCCTTAGAACCTTGGCTAGCGCCT
TACTGGATTTTGTCGAATCAGTCTATTTCAAGAAATTGTCAACCACAATC
AGAATAGCAGCCTGGAGATCCATGCTATGATTTCTTATTTTATATACTGA
TGGCAAAATATATAGCATGGTAAAAATAGGGGGTATAACAACCTTTGGTC
AAAATATCTATCATATTTATATATTGATTTAGATATTTGGTGTGGGACAA
CTAAAAAACAAGTGTAGATAGCTAAATTTTTGCCTGTGGCACCATGTTAA
ACTCTTTTTTCATATAATTTTTAATACAAATTTCAATGATTTTGGTTTTG
AATGACTGGTGGACTGCTGCTGTCAATAGCACAGGTTCGAACATTTTTTA
AAATAGGGGGATGTACATACAGACACATATAGGGGGAGACAAAATAAAAA
TGGGGGGTTTAGACCCCTCTGCACACTATAGGAATGGGCATTTTTAAAGG
TTGGTGGGATACCAAGAGGGGAGGTCAGACCCCTTTCTGCAATATGTCAT
GTGAGAGAATAAATTGTACAGTAATGCGAATCAATTGATCGACAAGATAA
AAGATTTGTTCCTATTTTTGGAAAAACAGGGTCTGCTCAGCCCTGTAGAA
GAATAAATTAATTTGCTCTCGTTTTACTCAAATCGCTTGTTTCATTGGAG
AAGGGAAAGCAAAAGTAGAAACCCAGGGGGTACTATGTTTGCAGGATGAC
AGGTATGTTGTGACCTTAGGGGGACTGGAATTAGATTATGTCTAACCTCA
CTCTTGCCATTATAGAATTCTGCATTGCTGAAATGTCAGATAATACATGA
TTGAAAGTGTAGCTTGAGCAGAGCCAACGACTAAACTTAAGAATATAGAA
TAACTTAGGAATGCAGGCCTCCCATTTGTCATAAATTCCTAAATTTTTAC
AAATTTTCACCTATTTGGTAAAAATAGCCTCTCATACCGTCATTAGCAAA
GTTCCTTTGAAGCTCGTAATCGTGCTGACGTCGTGGTCGTGTTCGAGGAG
TAAATTTCTCTGATCTTATAGACTCGTCATAAATGTGGAGGTTCTTGAAA
ACTTCCACCATATCACCAACTTGCCGCCTGGTCTTTAGGCTAGGCAGATT
GATGAGTTGTAGCTGATCTTCGTATGAGTAGTTTCTATAGCAACTAACTA
GCCTTGTAGCTCTTCGTTGGACGCCCTCGATTGCATTGATATGTTTGATT
AGCCTTGGAGACCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNCCTAAAATCTTTTTGCAGTGATGGTCTTCTGGAA
ATATTCCAGGGAAATCAAAATCATTTGGTTTTAGGATTTGGGTATATCCG
GCCTTAATGGGATTGAAATTCCTGCTGAAACAGGCTAAAATGCAACATTT
CGAGCAAAAACCCAATTTTTGACTAAAAACCTCTCTAGAATGGCAATAGT
TTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATAGTG
TACACATCCGGCCCAGCCGGGGGTTTTCAGTGGTTTTGATACCATTTACA
GTAGGTACAATCTTTTCCATCACCTTCCAGACGTACATTATTCTATAGCG
TTCTCTTCGCCTTTGAAGTGAGTAAACTTTTGTCTGTTTTAGACACTCCC
AATAATTCTTTGGGGTGCCATTTATCTTTCGTAAGAAGGACTTTTGAATA
TCTTCAAGTCTCTGAATGAGACCAACTGCGTTTGGGCTCCACAGAACGGA
GCAATATTCTAATATTGGTATTACCAATGATTTATATAGTACGATCATAC
AATTCAAAGATCGTGAAGAAAATGTTCTCAGGATCCAAGATGTTAAGTTT
TTAGCCTTTTCGATTACTGCAGTAATTTGCTTCTGAAATGTGCAATTACT
GTCCATCAGGATTCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NCCATTCACTAGCACTGATTGTTTTCTCTCTGTTAGGAAGGACATTAGCC
ACTGTAATAATTTTCCTTCTATTCCTAGTTTCTTTATTTTTCGTAGGACA
ATTGAATGGTCTACTTTGTCAAAAGCCTTTGAAAAATCTAGGTACACAAC
ATCCGCATTAGCATCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CCCAGATGACTTTGATTTTCCTGCATTATTTCCAGAATACTATCACTGCA
AGAAAATTCGGGCCCATGTCTATTGTCATTTTAGAGATTTTTTCCGTCCA
AATTTGGGTTTTTGCCTGAAAAATGGCTCTTAGCAGGGATTTTATTTCCA
AAATGGCGGACATAGACGCATCCCAGAACCAAATGATTTTGATTTTCCTG
GAGTATCTCCAGAACACTATCAATGCAAAAAAAATGTCTGTCAATATTTA
AACTCAGTTTGTCGAAGCTTGCCTTAAAAAATGCTATTTTTTGATAAATA
TAATTTTTTTTTGCTAAAAAGCGATTTTTGAAAACGCCATTATGAATTTT
TGAAAAAAGTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGATTA
TTTTGTTGCTTCTTCATAAAATTTAGTACAACAAATGAAAAAAATAAGAT
TTGAAATAGTTTTGACAAATTTACAGGCCTGAAAAGTCCAGAAAATGCCA
TTTTTTCCAATTTTTGCCGGTAGTGCGAATCAGTACCCCCAGGGGGGTTC
GGCCAATTTTGGACTTCTGACCTTAAAAATTGCGCAGAATGCCTCACAAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTGCGCAGAATGCCT
CACAATAGGTTAAATTTTCATAAAAAAACACTACATCTTGAATTTTCTGA
CTTTGACATTTGACGCCCCACCCTAATAATAGTCTATCTAGTAAAAAAAC
ATCTACCAGATGTTTCATAATTTGGTCCCTTAACGCTCTTTCCATCAGTC
TGCAAGCGATGGATGTAAGACTGACTGGTCTGTAATTTTCAGCTAGATTC
TTGCTGCCTTTTTTATATATTGGTGACACATGTGCAACTTTCCATCCGTC
TGGCAGAGTACTTTCATTAAATGATTTAGTCATGATTGTGTGGAGCGGGA
CAGCTATGTAGTCCGCTAGCTCCTTCAACATAATTGGATGAATTTCGTCC
GGACCAATTGACTTATTTGGGCTGAGACCTTTAAGTTCTTTTTTGACCAT
TTCCAAAGTGAGATTAAACTCTACTTTAGAATCGGTACGTGATTGAAACT
CCGGAAGACTATCATCGGGCTCTTTCGTGAATACACTACAGAACTGATCC
TGTAGTATATCAGCTTTGTCTTCGACCGTATAGTGAAGAGAAGATTTATC
CTTTGGGTTGCGCAGGAGAGGGAGATCCCAGATTTTGTTTTCATGGAGTT
ACGAACATGTCTCCAAAATCTTTTTGGACTCCTCTTTGCTTGCCCACGTA
TCCGTTTTCAAGTTCCCTTTTTACTTGTGTTATCTTTCTGTTAGCTTCGT
TCCGTGCAATCACATACTCAACTCTAGACAGTTCCTCTCTACTTGTACCA
ATCGATCGTATCCACTTCCGATGAAGACGCCGCTTTTCTTTAAGATATTG
TTGGATTTGCTGGTTTATTGCAAATCTTCCTCTTTTCCCATAGACTCGTT
TCGTTGCTGAAAGTGGGACAAATTCGGCCCTTAGTTCCAGTAGTTTTTCT
TGAAACATCTTCCAGCAACCATTCACTTGATGGTTTTTAGCTCGGACCTT
GAAATCGTCTACCCATCCTGAAGACTCCAGGTGTCTTTTCATCGCCGCAA
AATCTGCTTTATTATAATTAAACTTCTCAGTTAACACTTCTGGGTCGAGA
TAGCATTCAAATGAAAATGAGAGTACGCTATGGTCACTTTTGCAAAGAGG
AGCTAAGTAGTTGATTTTATTGACTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNTTCCTTTGTTTCGTCGTGGGGTGTCGACCAATACTCCCAGTTGATGT
CTTTGTAATTGAAATCTCCAACAATGCATTTATGAGTATACTTATTATTC
ATGCCCATTTCCCTAAGTAGTAGGTTGAGCATTATTTTTGGCAGATGTCT
CTGTGTTGGTAGGACTTCTATACATGCACCCAAATAACAAAGTGTCATTA
CCTTGTAACTTAATTTCGACCATGCAAGCTTCTTGGAATTCAGTCTCGAA
TCTTATTTCGACAACAAGATCTTTTATCGATTCATGTGTTAGAATGACGA
TTCCATGGCCAACTTTATTTAGTGCATTCGTTTCGAAAGGTGCTGAATAT
CCCTGAATGGAAAAGTCCTCAATGAGACGTTCTCTCTTCCAATTTTTCGG
TTTTACTTCGTATATTGCTATGATGTGAGGTTTTGATTTGGTCACTATCT
CAACAAGCTCTTTCTTACTTTTCTTTGTGAGCTGATCNTCTTCGTGAGCT
GATCAGCGTTCGTGTAAATGATGTCTAGGTTTTTTCGAACGTTCTGTAAC
TTCTTTTTAGGTTTTTCCGTATTTTCAATATTTTTTTTTGTTTTTTTGTT
TGTGATTACGGGATTTAGTGGTTTTGATTTCGTGGGAACTTCTTGAGATA
ATACCCGTTTTTTGAATCCCCTCTAACGCCCCAAACCCACTCAGGATCAT
CCAAGTTGAGTTTTTTTGCTTTATCTGCCCATTCTTTGAGCAGTAGCCTC
TCTGTTTGTGTAAGGTCTTCAGTCACACTGACTCCTTTGTATTTTTGGTT
ATCTTTTAAAGGAGCCAAATTACGAAGGAAAGTCATTTTTTCTTTTTCCG
ATCCAAGGACAACTTTTATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTCTTAATACTTGGTGTTTGAATCTTGATCGTTTTGAC
AAGTGCGTCTAAGAATTTTTTGTCTCCATCACTGGTTCCTTCGTCCTCTT
GCTCGTCTACACCATGGATTACAATATTCTTTTGACGTTGGTCATGGTCT
TTTTTTTCTTTGATCTCCTCATATCTGGCTTCCTTGACGATGGATTTTAA
GCCACTCGTTAACATCGGAGTGTTTGAAGCTTTTGTTACATTGGCATACG
ATTTCTCAACTTGCGACTCAACCTTCGTTAGGGAAGATTGAATTTCTTCC
AAGATAGATGATTTGATGGTCTCCCCGAGTTCACTGATCTGCGATTCGAT
CCTTTTGTTTAAGTTATCAAGTAAATGTTTCTCAAGTCCTCTTTCTCTCA
TGAGCTTCTTCATGGTTTTATTGTTTTCGCTTAGTTTGGTTTTACTTTTT
TCGATTTTCTCGATTTTTTGATCACGTCTTTGGATGATCTTTTTGAGATC
TTCTTCTTCGTTACTACATAAGGAGGAAACATCTTTCGAAACTTCAACAC
AGTTGACGCAAATGAAGGTACCTTTAACTTTGGTGGAAGCGCGCTTAGTT
TGATTATTTAGATGGATCTGGACTTGGTTGGCTGGTAGCTTGGTACACTT
GAAATGAACAAGCCGTAAACATTTTGTGTTGGTACATTTTAGCGAAGAAT
TTTCTTCTGGGTCGTAGCAATTGTTGACAGTACAAGTTGGCAGTGTTTCG
ACTGTAGATATGTCAATCGACGAAATATCGCTGTTTGGTATGTCGTCATC
CATCGGTGTTGATTTGGACGGTGTGTAATTCTTTCTAAATTGTCCTAAAT
TTTAAAGATTTGTCATAAATTTCATAAATTTCTTACAAACTTTCCCATCA
ATCACTCTAGTTTGACTAACTCATTCTTTAGAAAAGACTTTTTATTGATC
TTCAGCCAGCTCTAACCATGATGATAGAATTTTTACATAGATTTCACAAC
ACTTTAACCCATATCTTATTGTATTGTAACTTTTGGTCAACCAACATGAT
GTTGTATTAGAAGATTTGTTGTTAACCCTATTGGCCCCAAGCTTTTTTGA
CTTTGGTATCCCCAGGGGGGGGGTAGAATCTACCACCCTCGATTATTTTT
GATCTAGAAGAGCTATGGTCATGAAATTTGGTACAGATGTTCCCCATCAT
AAAACAAATTTCCAGGAAGAAAAAAAAAATTAATGACGTCATTCAAAAAC
CGATGACGTCATCACAAAATTTCCACCTGTCGGAAAAAAGCCCAAATATA
AGGTTTACTAAACTTTCTATTACAATCGAACCAATAAAGATATTTAGATT
CTGTTTAAAGATTCAGAAAGATAAAAGGTTGTTCTTTAACATAATTGCCG
GTTTTGAAATTTCCATGAACACTTTTTCTTAAAATCTATGCTGAAGATGA
GTAAAATTTTCAAAATTTGATGACGTCATAAATGATGACGTCATCATTTT
CAATTTTTTTTTTCAATTCTTCAAATTTATATTGTCAATGCCTATCACGT
GTCAAAATTTGAAAATGATTGAATAAATAGTTCAGAAGTTATCAGCACTT
TTAAATTTGGAGTTTTAAGCGGTTTTAGCTGGGTTTTATGTCATGTTTCA
CAATAAAGTCATAAGACCTGATCTGAACAACCTATGACCCTAAAATTTTG
CACAAGTACTCTTAATAAGATTTCGTTTAAAGTCAGAAAGTTTCAAGTCG
TTTAAAAAATTTTTCTCAGAGATATTTACAAAAGAACTCCAGCGTGGTAG
ATTCTACCCCCCCCCCTGGGGCTAATAGGGTTAATCCTGGAATTCGGCTG
AGGCTGAGCCAATATCATGAAAGATTCATTTTGAATTTAATGAAAATGAG
TTGGAATAATCAATTTATTTGTGTACATATAATCAATCTATTTTGATGTT
AGGCTTTAGTTTCATTCTTTAGTTTTCCTTGTTTAAAGTTTAAAGACTGA
AGTGTTTGAGTTTTTCTGAACCAGACGATGTCAGTCGAACCATCGAACAA
TCGAACTAATCGAATTTCATCAAACTAATCGAACGATAACTGTTCAATTA
CCGAACCTCATCGAACAGTTATCGAACCGAGAAATCCCAGTTTGTGTTCG
ATAACTGTTCGATGTGTTCGATTTCAATTCCATAGACCTTGACCTCCACT
TGTTCTCCACTCGTTCTCACAAATGCACCATCAGGGTGAGGCAGAAGTAG
TTGGCGCCCGCCCCGTAAAACAAACAGCATTGTTTAAGATCTACAATTAC
AAACTAATAGAACTCTATTTGAACTCTAAACGAACTTAATCTAAGAATAT
ATTATTATCAAACTATAATCGAACAGTAATTTCCGGTAGAGTTTGATTAC
TTTTCGATTTGGTTCGGTAATCAAACAGTTATCGTTCACTTAGTTTGATG
AAATTCGATTGTTCGATTACGAAAATTGGTTCGATAACGTTCGGTTGACA
TCGTTTGGTCTGAACCCAAGTTTTGCATTTTATGCTTTTATGTTATTGTT
CATTTAGTTATTTTGATTAAACAGATAATGAATACACAGTGATTACAGTG
TCACAATTGCCAGAGTGCCTTGATTTACATAATTTCTATTCCGCTTTTAT
TGGACTTGAATTCATATCATAGCGCTTAAAACCCGTTAAACAATAATTTG
AAAGAGGGCAAGAATTTTTGTCATAAAAATGTCCTAACTTTTGTTGAAAT
GTCATAAATTGTCATAAATTTTACACCCAAAAATGTCATAAAATGTCCTA
AAAAAGCATTAAAAACTGTCATAAATTCATAAAAAAAATAGCTAAATCAA
GAGTGGGAGACCTGATATAGTTGCCAGAATTTAAAATTTGGGCAAAGTGG
GCATCAATTTTTGGCATCCCCTTAAACTAAATATCTTAGTAAAAATTACA
GGAGGGAAGTGAGAGCATGAAAATTTTCGGGTATTCTCTCTCTTTTTGGC
TTAAAACAGGCATCTTTTTGGCTTAAAACAGGCATCTTTTTAAGCCCTTT
GTATTTTGGCTCCCCCCCCCAAAAAAAAAATTGGCCGCTGGTGCCCCCCA
GCCACCATTGTACTGGAGCCTTTGTAGCAAAAATCTTTTACAGGAATTAA
TCGATGTATCCTCTTAAAACCATATTTTCCAAGTTATTGAAAGTCTTGTA
TTGTGTTCTACAAATCCACAAGATAACCCAAAAATATTTTTTGGCCATAT
TATGCTCTTCCATAAAGATAAAAGAAACGGTGTATTTCTTCTCAATACTT
AAAGTTTCTTGCTTACGCATTCATCAGTTGATTAGAAATAACTATCAAAA
CAAAATTCTACGTTTATTTTTAAAAACTTCAGTACATCACAGTGTCTTCA
TATAAAAATTATATTTTTCTTCAATATTTGGGTGATGTCTTTACAGGGAA
TTTTTCATCTCATTATATTATATAACCATGAAACGTTTTTTTTTGTAAAG
CTTTCTTACGCTGTAAGCAACTTTAAAATCTATCAAAAGTTAAAATTATT
CTTTAGATGCTGCTATGGAAACTATATCACCCGACCACCAGGTTATCGTA
AGCACACCACCACCGCTAACCACTCCATTTAACTTATCAATCAACTCCAA
CACACACCAGCATATTCTGCCACCCATCAAAAGTCTACCATCTTGGAATC
GCCATCGTATTGGTTTAGCTAAACCTTGTAATCCAATAATCTCTAAAAAC
ATTGAAAATTTTAATACAGGATCCATCAGAAGTGTACCTTTAACTAAACA
GTCTGTACTCTCAGAACAGTGTACTCAAACTTCAGCACAGTCCTCTCGGC
AATCTTCCAGCTCTTCTCTAAGTTCAAATAAGCAGACACCGCCGCGAACG
TCTGGAAGCAGTAGGAAACACGATCTAAAATCACTTTATGACAAGAAAAT
TGTCTTTCTCCAAACGTCACATGGTGAAGTGCTTGGCAATTTGCAAGAAG
AAGTTGATCAATTAAAACTAGAAAATAAAGGTTGGTTATTTTATATTTTT
TATCATATTGCTTAGGAATCTTTCTTTCGTTGCCAGGCTTGATCTTATTT
TGTAGAACTAATGGTTTATTGTAGCTCAGAGCCCAAAATACAAAAATAAG
TTCAGAATAACTTTGAGTTTTTACCGAAAAAAGTATTAAAAGTTTCCAGT
TACAATGGAAATCTTACATGCACTACTGAAGTGTACATCAAATCTCTTAT
AAATGTCTTTTTTTTCCAGGTTTACAATTTAATCTAGTTATGACGAAAGG
CAACTTGGATAAATTGAGTAAATCACTTTCAAACAGTCCTCATGGATCAT
CAACTAATAGTAAGTGATATTCTTACTTATTGCTCAGACCATGTTCGCAG
GTAACAGTTCCGTTTTGCTCTGAAATGAAATGAATGAAGCCATTCTATTG
GTTCAAAGGCGATGTACAAATTAAATTTAACCAATAGAATGGTTTCATTT
CATTTTGAAACCATAGAGTGTGAACATGGACTTTTGCTAAATTAGGCTTT
TTTAGAAATGCCCTGTTGAAAATAAGAGTGCATTTGCCAAATCTCTATGG
CGTTATTTCCAGAAAGTTCATATATAATGGGATAGTGGGAGAAAGAAAGT
TGAATGTTGAAGTAATGCCGAGTAAATTTCATAGGGTAATAAAAAGAAGT
TTATTGTTAAAGGATATCAAATATCTAAGGCTGTAAATTATAACCCATTT
TCTTTCAAAGTGGATATCCTGGGGAGTCGAACTGTCGAAAAATCTTACTA
TAAACTCTAGAGTAGTTTTCATAAACATCTAAAGTTCATTCACTTTGAAT
GTGCGATCTGCGTTGCAACAATATGGAAACCACTTTCAAAGGAATAAGTC
TAACTAATTACGCTGAGTTGGTTTCCTCATTGTATCAAAAGCGAGTGCAC
ACTTAAAACAAATAGACTTTAATCTTCATTATGAAATCAAGGCTTTGGAT
GAATTCAGCTCTTTAAAAGCTTGATTTTAATATGACCCAGACTAAAGAAT
ACATCGTGTAATGTTTTGCCTACAATTCTTCGCTGCACTTTCATTTGGAA
CCTTTTAAATCTCAAATTTGTCTTGTCTTCGTAGATGATAACAATGAGTT
GAAACTGGTGCGTAAAGTAAAATCTTTGGAAAAAGAACTTCACAATGTCA
AAACGGAATTGAATTTGGCGAGAGACCAGAATAAAGAACTAATGGAACTT
GTACAGCAAAGTCAAAATCATGAAATTAGGTAAATCAAAAGGGCATTATT
TTTTTAAACAATACAAGTTAATTACAAGATCCCTGCCTTGTTTCTACAAG
CATCAACTCTTGATATTCATTTTGAATCAGTAAGGGCCCGTCTGAAATAG
CGTATCAGCCCACCATCTCCTAAATTTTGTACACTGAATACAAGTGCAAT
ATGTACAAAGCGTCCCTCAAATTGTTACTTTGGCTTATTAAAAGTGTCTC
TTTGACACAAAGCCTGTCTTAATATAATCTGCAGTGGAGACAAATAAGAC
TTTATATCTGTTAAGAACTCAAACAGATAGTGGTTCATAGTTAATCATTA
GTGGGATATCATTAAGTAGGCAAATCCCTAAAGATTTCTGAAAATGAAGA
TGTAAAATGTATTCTTGTAGAATTGTGCCATGATCACCATTTTCATATAT
TAGACTGTTATCACTGGGGAATTTTTGTTTTATTTTACAGGCCTAAATCG
TCGATCAAGTTCAATAATAAGAAAACGTTGAAAAAGAGTGCCACTACATC
ACGTCTACCAGCAAACTATCATAAGAAGATCTCTCCACGTGCTAGTTACC
AGACCTTTGAGAATGACTCAAAAGAAAACGAGGTATGGTTTCACTTAAAG
TTGTTTGTATGGTCATGGTGCTCACCCCCATCTTTAAAAGGAAGGAATTG
CACATATCTTAGGGGGCATTTAAAAACAAGTTTGGTAAAAATCCGGGCCT
TGGAACTTGGGAAGGGAGATTTTCTCACACTATGCAGTGAGAAAATGGAT
GCTTAGAAATTCCAAATCCGAAAAGGATTGCGCGACGCACTTAAGACGCT
TATGTTTAATCACCATCAAAGGTTTTCGATAATGAACACAACGTTAATTT
AATGTTCATCATCTGCGGCCGTAGCCATGAAGATAGACCATTCAGATACG
CTGCGCAAGGTTGTATGTTCGACCCCCAGCCGGTTCATACCCAATATTCC
CAAAATGGTACCTGGATATCTCTCTGCTGATGCTTGGCAATTGAAGAGAC
AGATCAATCAAGGTATATGGAGAAATCCATGAAAAGGATTGGCGCCCCCT
CCCCTTACTTTGGGTAGAAAGCTCAAGAAAAGGGAGCCTTTGGTCGCCCT
GATCGATTCAACGTATTCATAACTTTTCCATTGCAGGTTGGTTGTCTTTC
GGACAGGTGTAATCAAAACACCAATTTCACTTTACCCATTATTCAAAGCA
ATCGACGAAAACTGTAAGTTCACTCTTATTCTTTTATTTCTTCTTTTCGT
GGATGTGTGTTTACTTTAACATTTAACAAGAACATGGGCTTGAAATTTAT
TAAAATTATTCTCAGCTTCATGAATAAACCTTTCAACCCTAACGTCCCAA
GGGGTTTTGGTTCGAGTAAATTTCCAGGGTGTTTCTTATCAAATGTATGG
ATCTCATGATGACCATCAATGTGATATTTTTAATCATTATACGTCACTCG
TAAACCTGGTCAAGTCAAAACGCCAAGTCACCTTGTGTTGTTGGGGTTGA
TTCGTAGGGGTCTTACAAGTGAAAGAATTTAATAATTGATAATGCACTGT
TCTCAGTGGAGGATCAAATCAGGACATTTTTAATCGAGACCCGGCTGATC
TTATTTTTTTTCAGGCTTTTCAGACTCCAATTGCTCTCATTTCTAGGGAA
CATCAGTTTTCTTTATTTTTAAGCTTAGAATTCAGTTTTTCGACTTTTTT
AGGCAAAAAATTGTTCTTAAAAGTGTAATAATTGTTTGGCAATTTTGAAC
TTCATGGTTCTAATAAAAGATAAATGTAACATTAATTAGAGGGTCAACAC
AATCCTAGCTTAGCAATCCAAACATTTAATTATCTTCATTCTCAACAACT
CTTCAGGTCTGGTCGTAACAACAATAACAAAAAATCACGTGACTCCGATG
AACCAATCACATTGCCCATTTTACAACCGTTTCCACATCCAAATAACAAT
TATTCGTTGAGATGTAAACGAACCAAAGCTGTTCAAATGCAGAACAAACG
GCCTCAAAAAGACCTCTCGTTGTCTCTTTTATCCAAACAAAATTTTATGA
CGCAGTAACTTTGTTGGTCTCGTTCACTCGAATTTCAACGATTCAACATG
TATTTGACGTCAATCATTTTCTAAAAAAATTTGTCATAAACGTATTAAAA
ATGTGTGCTGGTATTATAAAATTGCAGATTATGACAAAAAAGACTATTGC
AAAACTTTATAGAAAAAAAACAATGAAATTGAACTGTATTATTTTTTTGG
TCCCCATATTTTACTTATCACATTTTTAATTTCTATTTTTAATATTTTTT
TACAAAACAATAACGTGTACATATTATACTAAAAAATCATTAGAGAAATG
AATTAATTTACAGAACAAAAAATAACTTTAATGAGCTATATGGAAAATTC
ATCTTGCGT

Coding sequence (CDS) from alignment at scaffold_498:118730..140038-

>TCONS_00069346 ID=TCONS_00069346|Name=TCONS_00069346|organism=Clytia hemisphaerica|type=CDS|length=1272bp|location=Sequence derived from alignment at scaffold_498:118730..140038- (Clytia hemisphaerica)
CGCCCGATTTCGTTTCCAAGAGCACTTCCGAAAACAATATGGCCGCCGAA
AAGTTTAGAAAAAAATGACCGGTGGAAACTCTTGAATCAAAGGGTCAAAA
GATCACTTCCTTATTCAATTGCTTGTCACTTCCATAAAGCAGATGCTGCT
ATGGAAACTATATCACCCGACCACCAGGTTATCGTAAGCACACCACCACC
GCTAACCACTCCATTTAACTTATCAATCAACTCCAACACACACCAGCATA
TTCTGCCACCCATCAAAAGTCTACCATCTTGGAATCGCCATCGTATTGGT
TTAGCTAAACCTTGTAATCCAATAATCTCTAAAAACATTGAAAATTTTAA
TACAGGATCCATCAGAAGTGTACCTTTAACTAAACAGTCTGTACTCTCAG
AACAGTGTACTCAAACTTCAGCACAGTCCTCTCGGCAATCTTCCAGCTCT
TCTCTAAGTTCAAATAAGCAGACACCGCCGCGAACGTCTGGAAGCAGTAG
GAAACACGATCTAAAATCACTTTATGACAAGAAAATTGTCTTTCTCCAAA
CGTCACATGGTGAAGTGCTTGGCAATTTGCAAGAAGAAGTTGATCAATTA
AAACTAGAAAATAAAGGTTTACAATTTAATCTAGTTATGACGAAAGGCAA
CTTGGATAAATTGAGTAAATCACTTTCAAACAGTCCTCATGGATCATCAA
CTAATAATGATAACAATGAGTTGAAACTGGTGCGTAAAGTAAAATCTTTG
GAAAAAGAACTTCACAATGTCAAAACGGAATTGAATTTGGCGAGAGACCA
GAATAAAGAACTAATGGAACTTGTACAGCAAAGTCAAAATCATGAAATTA
GGCCTAAATCGTCGATCAAGTTCAATAATAAGAAAACGTTGAAAAAGAGT
GCCACTACATCACGTCTACCAGCAAACTATCATAAGAAGATCTCTCCACG
TGCTAGTTACCAGACCTTTGAGAATGACTCAAAAGAAAACGAGGTTGGTT
GTCTTTCGGACAGGTGTAATCAAAACACCAATTTCACTTTACCCATTATT
CAAAGCAATCGACGAAAACTGTCTGGTCGTAACAACAATAACAAAAAATC
ACGTGACTCCGATGAACCAATCACATTGCCCATTTTACAACCGTTTCCAC
ATCCAAATAACAATTATTCGTTGAGATGTAAACGAACCAAAGCTGTTCAA
ATGCAGAACAAACGGCCTCAAAAAGACCTCTCGTTGTCTCTTTTATCCAA
ACAAAATTTTATGACGCAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043216XLOC_043216Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069346-proteinTCONS_00069346-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069346-exon-scaffold_498-1575043694:139895..140038TCONS_00069346-exon-scaffold_498-1575043694:139895..140038Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1575043694:122409..122882TCONS_00069346-exon-scaffold_498-1575043694:122409..122882Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1575043694:122080..122169TCONS_00069346-exon-scaffold_498-1575043694:122080..122169Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1575043694:121160..121304TCONS_00069346-exon-scaffold_498-1575043694:121160..121304Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1575043694:120557..120698TCONS_00069346-exon-scaffold_498-1575043694:120557..120698Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1575043694:119926..120002TCONS_00069346-exon-scaffold_498-1575043694:119926..120002Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1575043694:118730..119282TCONS_00069346-exon-scaffold_498-1575043694:118730..119282Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1510915933:139895..140038TCONS_00069346-exon-scaffold_498-1510915933:139895..140038Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1510915933:122409..122882TCONS_00069346-exon-scaffold_498-1510915933:122409..122882Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1510915933:122080..122169TCONS_00069346-exon-scaffold_498-1510915933:122080..122169Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1510915933:121160..121304TCONS_00069346-exon-scaffold_498-1510915933:121160..121304Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1510915933:120557..120698TCONS_00069346-exon-scaffold_498-1510915933:120557..120698Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1510915933:119926..120002TCONS_00069346-exon-scaffold_498-1510915933:119926..120002Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1510915933:118730..119282TCONS_00069346-exon-scaffold_498-1510915933:118730..119282Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1491911889:139895..140038TCONS_00069346-exon-scaffold_498-1491911889:139895..140038Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1491911889:122409..122882TCONS_00069346-exon-scaffold_498-1491911889:122409..122882Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1491911889:122080..122169TCONS_00069346-exon-scaffold_498-1491911889:122080..122169Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1491911889:121160..121304TCONS_00069346-exon-scaffold_498-1491911889:121160..121304Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1491911889:120557..120698TCONS_00069346-exon-scaffold_498-1491911889:120557..120698Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1491911889:119926..120002TCONS_00069346-exon-scaffold_498-1491911889:119926..120002Clytia hemisphaericaexon
TCONS_00069346-exon-scaffold_498-1491911889:118730..119282TCONS_00069346-exon-scaffold_498-1491911889:118730..119282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:118730..140038 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.2215	18.3244	4.90774	2.66439	210.702	157.555	79.2738	83.3224	58.9905	67.8911	55.8447	56.1165	8.01501	8.58324	11.9649	16.1075	18.1503	20.3771	7.75047	9.16939	16.8845	16.8022	31.8875	26.6398	147.01	97.4721	27.759	26.4354	18.5764	21.703
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069346 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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