TCONS_00069353 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069353
Unique NameTCONS_00069353
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2035

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069353 ID=TCONS_00069353|Name=TCONS_00069353|organism=Clytia hemisphaerica|type=transcript|length=2035bp
GTTTCCTATCGATGAAGAGGAGGAGGAGAACTGTTCATGTACCGTTAATA
TTGTATTTGCCATCGTCAACATTTTCAATCAACAAAAATCAATCAAGGAA
GGAAAGAGACatgaaaatgatatatttgagAAGATCAAACAAGGGATCGG
CTATGGCAGTATGGTTATGGAAAAAGATCTGCTCGACAAAGTGGGATATG
TTGTCGATGACTCCCTGTATCTACACTTGGAACTTAGGCTAGTCAAAACT
TTGTTCCATTCACAATTCGAATTGCCATTTGATGATCAGATTAACCTAAT
CGGTGGATACGACTTCCACAACGCACATTGGGCGTTTACTTTCTACCCTG
AGGGAGATGAAGAAATAGACCGCTTATTGGACCAAGAAAGAGAAGATCAG
ATTCAGTACTCATCATTATATTTACAACGGATAGACGATAAAGGAGTTGA
AAGCCAGCGTCATAATGTAAGATTCCGTATCATAGTACCAGGTCGAAAAG
AAGTATCCCTTGATAAACATTTTTGTGCAGAGGAATCAAACTGGTATGGA
ACGTGTAAATTCATGACCACCGAAGAGCTTCGAGAAATGGAATCCCTTAA
TTTGTCTTTAATATTTGAACACGTGGTACCTTATTTTTACTTCGCTCTTA
ACCAACAATTTATTAATgaagaaacatttttgaaaattcatttcTTGAGG
CTGTTTCCGCATGAACGTGGAATGTTTTTAGAGTTCCAGTTATTGAAAGA
TCCGGATAATGCTAGCGTCACAAAATGCCGATTGGTATTGGTGAACTATA
ATGCAAAAAAAGGTTCTAAGAATAAGCCAATTAAGCGGGGTAGAAAAATA
CAAGTATGTTGGTTTGTGGAGATCCTGTGTCCTCGAGACGTCGAGGAAAG
CATTGGTGTTGAATGTAATAGTAAAAGAATGGTGCAGGATTATATTGTTG
ATCGATGTGGAGAAGAAATTGATTACGAATTCCCAATACCGTTTGAGAAG
TTATTTGAAGAGGATTCACGATTTGTTGATGAAGAAGGAAACATATCTAT
CCGTATATCGGTTTATTGTTGTAATATAGTATCGGAAGATAGTCGAAGGG
TGGTCTCACTTGATGAAACATTCAATTTCTATGAAGAACTTCGAAGATCA
TTAACTCCACCTCCCTGTCAGGTCATCGAGAAATACATAGAGCCACCGCC
AGCAGAGCCTTTGGTAATAGAGgaccaacaacaacaaaatcgATTCGATC
CGACTGATACAGAAGATGATTTAGAGAAAGACTTGATGATCAAATCACTA
AGTGAACATTTAAATTCATCATACGACTATATTCAAAAACTTGAGCGACA
CCCTGTTAAAGCGAAATCTATCCGTCAAACACAGAGTCTTGCATCACTCA
TCCAATTTTCACGACCTTCCGATGAAGAAATCAAACATCTTGCACTTATG
GCTAAAAAAATAGAGAACATTTTATACggACTACCAGTTGGAGTTGAAAA
AGTGTTGCATTCTGGTCCTTTGGCGCAAGGCACTCTGGTAGCCACGAATA
TATGTTTGGATTTTGTATTGTACTTAGAAGaATACAGGAAATACCAAGGC
TCGTTACCACTATTTATGCAACTAATCATTGAAGCCATTAAACAACATGC
TTCAAAAAGTCCATCAGATCTCAGGCTAAATCGATGGGACAAAGATTACA
GGCTACCCTTCATATCAAACGTCTATCACGCTTCTGATAATTGCGTCATC
TTCCGATGTGGTGACGTCAATGTTAGCTTGTTGATTTCCCAGGGTTTCCG
TGGATTCCGGAATGCGACTAGTATTTACAAGAAAGCTGGAAGAGTTAAAA
ACACAGGCCTTTATCAatatatTGTTATGATGAGCTACCTTCAAGTCAAA
TTCGTCGCCTTGCAACCTTTTCGGTGTAAAGAATTGATCTGTGTGGTGAA
GTCATGGAGTGATGGCGTGTTATGGAGAACATCCGAATGTCGACCTGGTT
CTTATCTTCTCACATTGTTGGTGATCCATGCTTAC
Run BLAST on NCBI

protein sequence of TCONS_00069353-protein

>TCONS_00069353-protein ID=TCONS_00069353-protein|Name=TCONS_00069353-protein|organism=Clytia hemisphaerica|type=polypeptide|length=678bp
FPIDEEEEENCSCTVNIVFAIVNIFNQQKSIKEGKRHENDIFEKIKQGIG
YGSMVMEKDLLDKVGYVVDDSLYLHLELRLVKTLFHSQFELPFDDQINLI
GGYDFHNAHWAFTFYPEGDEEIDRLLDQEREDQIQYSSLYLQRIDDKGVE
SQRHNVRFRIIVPGRKEVSLDKHFCAEESNWYGTCKFMTTEELREMESLN
LSLIFEHVVPYFYFALNQQFINEETFLKIHFLRLFPHERGMFLEFQLLKD
PDNASVTKCRLVLVNYNAKKGSKNKPIKRGRKIQVCWFVEILCPRDVEES
IGVECNSKRMVQDYIVDRCGEEIDYEFPIPFEKLFEEDSRFVDEEGNISI
RISVYCCNIVSEDSRRVVSLDETFNFYEELRRSLTPPPCQVIEKYIEPPP
AEPLVIEDQQQQNRFDPTDTEDDLEKDLMIKSLSEHLNSSYDYIQKLERH
PVKAKSIRQTQSLASLIQFSRPSDEEIKHLALMAKKIENILYGLPVGVEK
VLHSGPLAQGTLVATNICLDFVLYLEEYRKYQGSLPLFMQLIIEAIKQHA
SKSPSDLRLNRWDKDYRLPFISNVYHASDNCVIFRCGDVNVSLLISQGFR
GFRNATSIYKKAGRVKNTGLYQYIVMMSYLQVKFVALQPFRCKELICVVK
SWSDGVLWRTSECRPGSYLLTLLVIHAY
Run BLAST on NCBI

transcript from alignment at scaffold_498:255604..266349-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069353 ID=TCONS_00069353|Name=TCONS_00069353|organism=Clytia hemisphaerica|type=transcript|length=10746bp|location=Sequence derived from alignment at scaffold_498:255604..266349- (Clytia hemisphaerica)
GTTTCCTATCGATGAAGAGGAGGAGGAGAACTGTTCATGTACCGTTAATA
TTGTATTTGCCATCGTCAACATTTTCAATCAACAAAAATCAATCAAGGAA
GGAAAGAGACATGAAAATGATATATTTGAGAAGGTAAGTTCTGAATGCTT
TCCTAGAGTAGAATCTTCTGACAACTGGAATGTTCTTTCTAAAGATTTTA
GAATAAAGTGATGCCCGGGGTGGGGGTCACTCAAGCAAAAATTGAGTACG
AGCGACGTGTCACTGTTGGTCACTTTTTGAAACTCTAAAAATGATTACTA
TATTTGAAAAGGTTTCTTACAGCTGTAACCTCCATTTTTTGAACTCCAGC
AGCACAACCCGTCGGCCGCCAGTGCTAGTGATTCCCTCGGAACAAAGGTG
TGTCAGACATCCTGAAAGTGCTTCAAAATTAAAAAAATTGACACCTTGAG
TATGATGACATTTCTGACAGTAAGAAATCACAAAAATTTAAACATTTCCA
ATACAAATTTATTTTTTATGTTAACCCTTTAAGCCCTCCTGTAATTCCCA
GTTTGAGTTAGAAATCGTCATTTTTGGTCTAACTCGTAGGAATTGGATTC
GGCTCTATGGTCAAGCAAAAATAAAATCAAAACTGAGTCTTTCCAGCGAG
ATTTTAAGCCAAAAAGTCAAAAAAATGCAAACAATTGACAAAAATCCACT
CTTTTAAGATTTTGACCACTTTTGGTCAAAGAGTGATCCAAATTTGGCCC
TGCTTTACTTGATTCTGTCTTCCAGCGAATTGATTTGAAGTTTTACCACT
GGGTAAAACCTTTTTATCATTCAGGTAGGTCTATGCAGCGGGTCTGACTG
CTTTAATTCCCCTTACCTGCCCCCCTTTACCACCACCGAAGCCGCCTTTC
GTAAATCGAGCGGCGCTAAAGGCGTCTAAAAGAAAGAGGAGACTCTAAGC
TATCCAACGAACTATAAACGAGCTTCTAACTCCTTCTAGATCCGGAGATA
TAAGCCTTTAAAGTTTGAACTAGCGATTTTCTTTAAAAGACCCACAAGAT
CAAAAGTTGGGTGGTACAGGAACAGCCACCCCTAGTTTTGAACCGTCCCT
AAAAGCCTAATATGAATAGGGTTAAAGATTTGAAGTACGAAGAAACTTCA
GAAAAGCTGATGTTTTAACTGCTAGGATCAAAAGCTAGTTCCTTTGTGAC
TGGAATTTTAATAAAGTCAACCTTCCTATCTCACAAGCTTGCTCATCAAA
AAATTATTATCTTATTATCTCAGATCAAACAAGGGATCGGCTATGGCAGT
ATGGTTATGGAAAAAGATCTGCTCGACAAAGTGGGATATGTTGTCGATGA
CTCCCTGTATCTACACTTGGAACTTAGGCTAGTCAAAACTTTGTTCCATT
CACAATTCGAATTGCCATTTGATGATCAGGTAAGTTGTCCTGTACGGTAT
ATTTATAATTTTCAATTCTTTTAGAGCAAAATTTAGAGCTGAATTTGGTG
AAACCTCCACCCTTACAGTGTATTTATCAAAGCCTTACAGTGCATCACTG
CTATCTTGAAAAGCATACCCTTAACCGCTGCACAAACACTTTGCCATCAT
TTTGCCTAACCTTCCTCCCAGGTCACCGGTTTTATATATTTGGTAAATCT
GATATTCCACTTACCACTTTTCAATGAAAAAGAACCACAACTATGGCTCG
TTGATTAAATAAAATTAAGTCACATACTCGTCATTCCAATACCTTTGGGA
GCAATCTTCTACTACTCTGTGAAGGTTGAGCCAAGCTAAAGTAACGGAAA
CATCCCGGAAAAGCTGTCATAGCTAGCCCTGGATAAGGAAACCTAATGGA
AAACATCCCGGAAAAGCTGTCATAGCTAGCCCTGGATAGTGAAACTTAAT
CAGATTATTGAAGGTTCCATGGAATTTCCCTGGAAAAATATCCCCACTCC
TTGTTTGGAGGTCCAACCATTCATCACTTTAAATTGTCACCCGTTTAAAT
TTCAAGAAAGTTTAAGTCCTTATTTTCCTGGAGTTGTCAGAACTTTTGTA
GTTCTGAAACTTATTCCAATTTTCATAGATTAACCTAATCGGTGGATACG
ACTTCCACAACGCACATTGGGCGTTTACTTTCTACCCTGAGGGAGATGAA
GAAATAGACCGCTTATTGGACCAAGAAAGAGAAGATCAGATTCAGTACTC
ATCATTATATTTACAACGGATAGACGATAAAGGAGTTGAAAGCCAGCGTC
ATAATGTAAGATTCCGTATCATAGTACCAGGTCGAAAAGAAGTATCCCTT
GATAAACATTTTTGTGCAGAGGAATCAAACTGGTATGGAACGTGTAAATT
CATGACCACCGAAGAGCTTCGAGAAATGGAATCCCTTAATTTGTCTTTAA
TATTTGAACACGTGGTACCTTATTTTTACTTCGCTCTTAACCAACAATTT
ATTAATGAAGAAACATTTTTGAAAATTCATTTCTTGAGGCTGTTTCCGCA
TGAACGTGGAATGTTTTTAGAGTTCCAGTTATTGAAAGATCCGGATAATG
CTAGCGTCACAAAATGCCGATTGGTATTGGTGAACTATAATGCAAAAAAA
GGTTCTAAGAATAAGCCAATTAAGCGGGGTAGAAAAATACAAGTATGTTG
GTTTGTGGAGATCCTGTGTCCTCGAGACGTCGAGGAAAGCATTGGTGTTG
AATGTAATAGTAAAAGAATGGTGCAGGATTATATTGTTGATCGATGTGGA
GAAGAAATTGATTACGAATTCCCAATACCGTTTGAGAAGGTAAGTTTTGC
TTATAATCTTTTGTCCAGTCTAGTGTATTGTCCTTTCTTAATACTGTTGA
TAGCACATGGGATTTTTACCATACAGTACCAGCTTCATGAGAAAATTCAG
CGGTTTCGCACAAAACTATATTCATTTTCTGTAACATTGGCGATTAATAA
GCAAAGAATGCGAGGCAGAAAAACTGGTGTCTTTCTACTATAGAGACGGT
TAAATTTTGATTTGCTGAATCCTGACCAACTGAGGACTACGGTAAATCAG
AGCACTTTTACCGTCTTTGATTTAGTGGGTTAGTACTGCAGATTGTTTCA
AATCGTCTCAGTCACTCCACCAACCTCAAAAGCGTAGATACATAAACTCG
CTAAAAAGTCTGGGAGAGCTACTACATTATTTATAAGAACAATTTTATAA
GAACAACGAGGCTCGAAATTGCCAAAAAATAAGAACAATTTAAGAAAAAT
AAGCGCGAAATTACTCAATTTCATGCAGTTAAAGGGTCAAAATAGTAAAA
ATTTGGTAAACCGCCTAAAATACAACATTTATACACTATAAATAAGAATA
GGATAATAATAATTTGAGGCTCAAAGTACCAAAAAATAAGAACAACCAAC
CAAAGTCTCAGCAAAATTCTACTGGCTCTTTAAAAAAAGTGTAATTTAGT
GCTGTTCTGTTGACTATATCTCATTCTATCTTTATATCATTTCGTTATCA
GTTATTTGAAGAGGATTCACGATTTGTTGATGAAGAAGGAAACATATCTA
TCCGTATATCGGTTTATTGTTGTAATATAGTATCGGAAGATAGTCGAAGG
GTGGTCTCACTTGATGAAACATTCAATTTCTATGAAGAACTTCGAAGATC
ATTAACTCCACCTCCCTGTCAGGTATTCATGATTCATAGGCCATTTCACA
GTCGAAATGGATCATGGGTAATCAGGGATGATTGCGCCCCGATAACGGTT
TCCCATTGGTTAGGCGCAAAAGTCTTCAAAATTTTTCAAAACATTGGACC
AATAGTAAGTCGCTATTAGGGCGTAATGGTCCTGATTGCCCATTACGCTT
TGTGACTGTGAAATGGCCTATGATATGCACCATTACAATGTCTTCTAACA
TTACATCACGGACCCAATAGCTGATTGGTTGTAAATGACGTAAAATCAGT
CAATATGTCACTTGCAACCAATCATCTGTTGGTTCTTAAGTGCAATGTTG
ATATCATGAACAGAGGATTTAAATTACTCATTAAATGGATTCTTACTGGG
ACTTATCGACTTAAATATTCTATAATTCAAACTAATACGAACTTTTTTGA
TAGACGTCAAAAAAAACACAGAGCCTTAAAATGCTTCCAAAAGTGCGAAT
TGTACTGTTTATTGAGCAAATGTTGATTTTAGGCTATGGCAAACCGGTCA
TACATTTCATCAAACATGTCATTTTTAAATGTTGAAATGAAATGTTGGAT
CGGTTTAACCCTGGTCTTTCCCTGCTCCTCTAGTTATTAAGAAACATTTC
AAATTCATTGGAAACTCATTAAATCGAGTATCGTTAAATTCAATTTTAGG
TCATCGAGAAATACATAGAGCCACCGCCAGCAGAGCCTTTGGTAATAGAG
GACCAACAACAACAAAATCGATTCGATCCGACTGATACAGAAGATGATTT
AGAGAAAGACTTGATGATCAAATCACTAAGTGAACATTTAAATTCATCAT
ACGACTATATTCAAAAACTTGAGCGACACCCTGTTAAAGTAAGTACCTTG
CATGCCCCAAGACACTGGCCTCTAAACAATGGCACTTAAACACTATCCCC
CGAATGCTGGCCCTAAACACTGGTCCCTGAACACTGACCCGAGCGCTGAC
CCCTAAACACTGGCCCCTAAACACTGTCCCCCGAATGCTAGCCCTACCAC
TGTCCCTTAAACGTTTGCCCTTGAACACTTGAACCTAAACGCTGATCCTT
ACTCCAAATTAGATAAATAATAACGCAATAACGTAATAACGGGCCCAAGT
CAAAACAAACACTTAGAGAAAGGTCTATGGTAGATAAAAAAATCAAGTGT
TTCATAAAAGTCCTCGAATTTGGAAACGATAAGCACTTGCCCTTATACTT
TAGCCCTTGAACGCTGGAAGCTAAACACTGGTTTTTATTCCGATGTAGAC
AAAATAAAGCCATTAAGGACCCATGTCAAAAGGACTGGTAAAAAGATCAA
GTGTTGTAGCGTTTTGTTTTGGAATGTCAAAGTTACTGATATTCTACACT
TGACAGCTTTAGCATTAAAAAAAAAAAATCTTCAAGATTCAAATTTTTTC
CTGTTAGAAAGTTTAAAAGATTGATGATCACAGAATCTTTCAAATTTTTT
CATGTATGATTTATATTTTAGGCGAAATCTATCCGTCAAACACAGAGTCT
TGCATCACTCATCCAATTTTCACGACCTTCCGATGAAGAAATCAAACATC
TTGCACTTATGGCTAAAAAAATAGAGAACATTTTATACGTAAGTTAAAAA
AAGTCTATCAGTCAAACACAAAATCTTGCATCACTCATCCAACGCCTAGG
TAACACAATAAAAACCATCTTGTACCCAAATCCCAAAACGAGATGTAAAA
GTTAACTATAGGACTGGGTTCGAGTTTGCAGAGAGTAATCCTTACCGTCA
TTGCGACGAAATTTTCAGGCAACTTTTTTTTGAAGAAAAACTTTTCTGGT
CACCTTCGATGAAGTAGTGTTTTGGCGTTCTATATCTAAATGATTTAAAA
CGAAAAATGTTATCACAAAAGTGACGAGTTTTTCCCCGACTTTAATTTTA
TCTGGCGAAAAGTTTTGACATCAGCACTAAGTGTTCCTTATTATATTATA
ACGAAAATGTAGTTTTTGTATTTTGTTTTTTTCAGGGACTACCAGTTGGA
GTTGAAAAAGTGTTGCATTCTGGTCCTTTGGCGCAAGGCACTCTGGTAGC
CACGAATATATGTTTGGATTTTGTATTGTACTTAGAAGGTACGAAGGAGA
AAAGAATAATTCATTTAATTCAAAAACATTTTGATCGGGGTAATTGATAA
GAAGTTGAGTGAAAATATCAACGAATATGGAAAAGTCGGGTAAAATTTCA
ATTACTCTAAGGTACCAAATAAACGTCTGTAACTGGTTATCAATTTTCGA
AAATTTTTCGGATCCCCCCCCTGTTGTTATTTTTGATTTCTCTTTGTAGC
CTAACCGTTTTGTGAGTATTTTCTGCAATTTCCTAAGAGCTAGAGTACGT
GATTATTTCCACGAAAATTGTAAAGAAGGCTATTTAATAGAACCCACCAA
AATCACTGTGTTAATTAGGTACAAAGATCATCATGTAATGAAAAAACCTT
AAAATATATTTTCTAGAATACAGGAAATACCAAGGCTCGTTACCACTATT
TATGCAACTAATCATTGAAGCCATTAAACAACATGCTTCAAAAAGTCCAT
CAGATCTCAGGCTAAATCGATGGGACAAAGATTACAGGCTACCCTTCATA
TCAAACGTCTATCACGCTTCTGATAATTGCGTCATCTTCCGATGTGGTGA
CGTCAATGTTAGCTTGTTGATTTCCCAGGGTTTCCGTGGATTCCGGAATG
CGACTAGTATTTACAAGAAAGCTGGAAGAGTTAAAAACACAGGCCTTTAT
CAGTAAGTTAAACCTCTATTTGTGCTACTATCTGATATTATTTTTCGTTT
ATTNCTGCAATTTCCTAAGAGCTAGAGTACGTGATTATTTCCACGAAAAT
TGTAAAGAAGGCTATTTAATAGAACCCACCAAAATCACTGTGTTAATTAG
GTACAAAGGTCATCCTGTAATGAAAAAACCTTAAAATATATTTTCTAGAA
TATAGGAAATACCAAGGCTCGTTACCACTATTTATGCAACTAATCATTGA
AACCATTAAACAACATGCTTCAAAAAGTCCATCAGATCTCAGGCTAAATC
GATGGGACAAAGATTACAGGCTACCCTTCATATCAAACGTCTATCACGCT
TCTGATAATTGCGTCATCTTCCGATGTGGTGACGTCAATGTTAGCTTGTT
AATTTCCCAGGGTTTCCGTGGATTCCGGAATGCGACTAGTATTTACAAGA
AAGCTGGAAGAGTTAAGAACACAGGGCTTTATCAGTAAGTTAAACCTCTA
TTTGTGCTACTATCTGATATTATTTTTCGTTTATTAAGCACCATCCTCCG
TTGAGTACCCTCTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGCC
GTATTTAAAATGTGTTTTCTGACTGATGTAACCAACAAAACTATGGCATG
TTATACATTTTCTGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAAA
TTGCAATGAAATAATTTGATGAAGAAGAAAATGAAGACTTTTGCGAGGAA
GAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAAACATTATG
AAAAAATTTTCGAAGTAGATGGTTACCTAGCAATAAAAATTTTTGCGGAA
AATTTTTGTAAATGCTTCTTTCTCTCGAAATCTTCAAAATAGTGGTTTTT
CATCAATTTTTCATCTTGATTTTGCTTAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
AACTTAGCACTTTTTATAAAAGAAGGTGATTCAACATATTATTAACGTCT
TTTTAAAGTTCATAACGTCATTTTTGTAATTAAATTCTTAATTACTCTGA
AGGGATTTGATTAAAAAGCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAGGCAATTCTTTGTTGAAAGTGTTAAAGAAC
CTAAAACATAACTTTTATGTTCAAATACTAAAATCAATTTTCCGACTATG
GTCAGAGCCCTTAAAAGGGCCGCACCTAAAATAAGATATTTGAAAATAGC
GCTGATATAGATAAATTTAATAACCACAGAAACCGCGAACCGACTTTTAG
ATAGTGGTTTTTCCTATCGAACGGGTAACAAGAAAGTTAATGTCATTATA
ATAGAGAGCCTATACCACTGAAAAAAACAAGGCTGTTCAAACTTTTACTC
CTTAGTTAAAAACAAAGGTATTTTAATCAGAAAATGCTTTTTCAAAATTA
AAAAAAGCGCTGCACCACTTGAAATTTTAAGGAACGGCGAGGCGCTTACT
TGACAAAATATAGTACAGCCTTTTTTATATGAGAGTAGTATATCCTTCTG
ACTCTAAAGTTTTTCTTGCGTTATGGATCGCATTTTTTTATTTAAAGCTC
TACCACGGCAATTTTCTCAAACACTCGGCTGTAAACTCTACGCAAATATA
TTTTTATTTTTTTTTCAGATATATTGTTATGATGAGCTACCTTCAAGTCA
AATTCGTCGCCTTGCAACCTTTTCGGGTGAGTGAAAGTAAAAAACCATAT
GGTAAAAATTTTCATAAGCATGTACATCATTTTATCTCGAATCAGATTTA
GGGAGCATCCAGATGCGAAACCACGAAAAAAGGTAATACATATGAAAACT
CGAACTCAGTCCCTTTTAGTTCGCTTTTTTATAATTATTGAAGGGCCCAA
CGTGTCAGTAAAAATTAAAAGGTGCTGCAAGTGGTTCAGCATACAAGATT
GAATATATTTGCAAATCTGACAATAGAAAGTGCTCTATACCATCGGTAGA
GCGGTATATCAAGAATAGAGACAAATTTTTCCGATACTCGGAGTTTCGTG
CCGTTTCAGGCAGTCTTCACTAAAATCACGACTGACAGTTAGGGAAACCA
TCCAGGATCCTGCCATTCTATAAGCCAGCAAAAACTAAATGACACTTGTA
AACTTAAGTTTCTTACCATTTTCCATCGAAAACAACNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTATGATTTTTTTGATTGCG
GCCGCGTACAGGAACTCGCCAAATGTTCCTAACTGACTGAAGGCTGCCTG
AAACGGCACGAAACTCCAAGATTGAATATACATGCTCATAAGTCACTTGT
GGTGCTGAAACCTATTAGACCACTCTACGATCACTCATTTTTTCTATCGA
CATTTTTCTTTTCTTTATCTATATTCCAACTAAAGATCACGTGACCGCAA
GGGCGGTTATATTTACAAAATATCCATTGAGTAATATTTATCAATAAAAT
ACACAGTAATTATTGCTTATTCGAATCTTTCTACAATTCGAACTTGTTTC
CAGTCCCCGTTAAGGAGAAACCCTCTTAAATACTTTCTATAATTCGAATC
TCTCTGTTATTCATACAAGATTCCCCCTTCCAGTTCGAATTAGCGAGATT
CAATTGTACTACAGGTTTTTTTTCTTGCCCTTCAGTGTAAAGAATTGATC
TGTGTGGTGAAGTCATGGAGTGATGGCGTGTTATGGAGAACATCCGAATG
TCGACCTGGTTCTTATCTTCTCACATTGTTGGTGATCCATGCTTAC

Coding sequence (CDS) from alignment at scaffold_498:255604..266349-

>TCONS_00069353 ID=TCONS_00069353|Name=TCONS_00069353|organism=Clytia hemisphaerica|type=CDS|length=2034bp|location=Sequence derived from alignment at scaffold_498:255604..266349- (Clytia hemisphaerica)
TTTCCTATCGATGAAGAGGAGGAGGAGAACTGTTCATGTACCGTTAATAT
TGTATTTGCCATCGTCAACATTTTCAATCAACAAAAATCAATCAAGGAAG
GAAAGAGACATGAAAATGATATATTTGAGAAGATCAAACAAGGGATCGGC
TATGGCAGTATGGTTATGGAAAAAGATCTGCTCGACAAAGTGGGATATGT
TGTCGATGACTCCCTGTATCTACACTTGGAACTTAGGCTAGTCAAAACTT
TGTTCCATTCACAATTCGAATTGCCATTTGATGATCAGATTAACCTAATC
GGTGGATACGACTTCCACAACGCACATTGGGCGTTTACTTTCTACCCTGA
GGGAGATGAAGAAATAGACCGCTTATTGGACCAAGAAAGAGAAGATCAGA
TTCAGTACTCATCATTATATTTACAACGGATAGACGATAAAGGAGTTGAA
AGCCAGCGTCATAATGTAAGATTCCGTATCATAGTACCAGGTCGAAAAGA
AGTATCCCTTGATAAACATTTTTGTGCAGAGGAATCAAACTGGTATGGAA
CGTGTAAATTCATGACCACCGAAGAGCTTCGAGAAATGGAATCCCTTAAT
TTGTCTTTAATATTTGAACACGTGGTACCTTATTTTTACTTCGCTCTTAA
CCAACAATTTATTAATGAAGAAACATTTTTGAAAATTCATTTCTTGAGGC
TGTTTCCGCATGAACGTGGAATGTTTTTAGAGTTCCAGTTATTGAAAGAT
CCGGATAATGCTAGCGTCACAAAATGCCGATTGGTATTGGTGAACTATAA
TGCAAAAAAAGGTTCTAAGAATAAGCCAATTAAGCGGGGTAGAAAAATAC
AAGTATGTTGGTTTGTGGAGATCCTGTGTCCTCGAGACGTCGAGGAAAGC
ATTGGTGTTGAATGTAATAGTAAAAGAATGGTGCAGGATTATATTGTTGA
TCGATGTGGAGAAGAAATTGATTACGAATTCCCAATACCGTTTGAGAAGT
TATTTGAAGAGGATTCACGATTTGTTGATGAAGAAGGAAACATATCTATC
CGTATATCGGTTTATTGTTGTAATATAGTATCGGAAGATAGTCGAAGGGT
GGTCTCACTTGATGAAACATTCAATTTCTATGAAGAACTTCGAAGATCAT
TAACTCCACCTCCCTGTCAGGTCATCGAGAAATACATAGAGCCACCGCCA
GCAGAGCCTTTGGTAATAGAGGACCAACAACAACAAAATCGATTCGATCC
GACTGATACAGAAGATGATTTAGAGAAAGACTTGATGATCAAATCACTAA
GTGAACATTTAAATTCATCATACGACTATATTCAAAAACTTGAGCGACAC
CCTGTTAAAGCGAAATCTATCCGTCAAACACAGAGTCTTGCATCACTCAT
CCAATTTTCACGACCTTCCGATGAAGAAATCAAACATCTTGCACTTATGG
CTAAAAAAATAGAGAACATTTTATACGGACTACCAGTTGGAGTTGAAAAA
GTGTTGCATTCTGGTCCTTTGGCGCAAGGCACTCTGGTAGCCACGAATAT
ATGTTTGGATTTTGTATTGTACTTAGAAGAATACAGGAAATACCAAGGCT
CGTTACCACTATTTATGCAACTAATCATTGAAGCCATTAAACAACATGCT
TCAAAAAGTCCATCAGATCTCAGGCTAAATCGATGGGACAAAGATTACAG
GCTACCCTTCATATCAAACGTCTATCACGCTTCTGATAATTGCGTCATCT
TCCGATGTGGTGACGTCAATGTTAGCTTGTTGATTTCCCAGGGTTTCCGT
GGATTCCGGAATGCGACTAGTATTTACAAGAAAGCTGGAAGAGTTAAAAA
CACAGGCCTTTATCAATATATTGTTATGATGAGCTACCTTCAAGTCAAAT
TCGTCGCCTTGCAACCTTTTCGGTGTAAAGAATTGATCTGTGTGGTGAAG
TCATGGAGTGATGGCGTGTTATGGAGAACATCCGAATGTCGACCTGGTTC
TTATCTTCTCACATTGTTGGTGATCCATGCTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043218XLOC_043218Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069353-proteinTCONS_00069353-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069353-exon-scaffold_498-1575043694:266217..266349TCONS_00069353-exon-scaffold_498-1575043694:266217..266349Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:264921..265076TCONS_00069353-exon-scaffold_498-1575043694:264921..265076Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:263561..264271TCONS_00069353-exon-scaffold_498-1575043694:263561..264271Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:262678..262848TCONS_00069353-exon-scaffold_498-1575043694:262678..262848Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:261812..262000TCONS_00069353-exon-scaffold_498-1575043694:261812..262000Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:261062..261178TCONS_00069353-exon-scaffold_498-1575043694:261062..261178Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:260562..260664TCONS_00069353-exon-scaffold_498-1575043694:260562..260664Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:259898..260183TCONS_00069353-exon-scaffold_498-1575043694:259898..260183Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:257824..257881TCONS_00069353-exon-scaffold_498-1575043694:257824..257881Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1575043694:255604..255714TCONS_00069353-exon-scaffold_498-1575043694:255604..255714Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:266217..266349TCONS_00069353-exon-scaffold_498-1510915933:266217..266349Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:264921..265076TCONS_00069353-exon-scaffold_498-1510915933:264921..265076Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:263561..264271TCONS_00069353-exon-scaffold_498-1510915933:263561..264271Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:262678..262848TCONS_00069353-exon-scaffold_498-1510915933:262678..262848Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:261812..262000TCONS_00069353-exon-scaffold_498-1510915933:261812..262000Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:261062..261178TCONS_00069353-exon-scaffold_498-1510915933:261062..261178Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:260562..260664TCONS_00069353-exon-scaffold_498-1510915933:260562..260664Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:259898..260183TCONS_00069353-exon-scaffold_498-1510915933:259898..260183Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:257824..257881TCONS_00069353-exon-scaffold_498-1510915933:257824..257881Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1510915933:255604..255714TCONS_00069353-exon-scaffold_498-1510915933:255604..255714Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:266217..266349TCONS_00069353-exon-scaffold_498-1491911889:266217..266349Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:264921..265076TCONS_00069353-exon-scaffold_498-1491911889:264921..265076Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:263561..264271TCONS_00069353-exon-scaffold_498-1491911889:263561..264271Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:262678..262848TCONS_00069353-exon-scaffold_498-1491911889:262678..262848Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:261812..262000TCONS_00069353-exon-scaffold_498-1491911889:261812..262000Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:261062..261178TCONS_00069353-exon-scaffold_498-1491911889:261062..261178Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:260562..260664TCONS_00069353-exon-scaffold_498-1491911889:260562..260664Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:259898..260183TCONS_00069353-exon-scaffold_498-1491911889:259898..260183Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:257824..257881TCONS_00069353-exon-scaffold_498-1491911889:257824..257881Clytia hemisphaericaexon
TCONS_00069353-exon-scaffold_498-1491911889:255604..255714TCONS_00069353-exon-scaffold_498-1491911889:255604..255714Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:255604..266349 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0568396	0.0219988	0	0.0262014	0	0.299752	0.210468	0.25479	0.182521	0.196504	0.121509	2.80293	2.38918	1.21068	2.12959	0.913794	1.02677	0	0.0216126	0.865741	0.794348	0.559274	0.427663	1.36917	1.69331	0.133207	0.0291047	0.0215649	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR0189522-5-oligoAdlate_synth_1_dom2/C
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069353 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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