TCONS_00069574 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069574
Unique NameTCONS_00069574
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2669

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069574 ID=TCONS_00069574|Name=TCONS_00069574|organism=Clytia hemisphaerica|type=transcript|length=2669bp
tacaATGCAAGTTATATCACTTTATTCCCAATGTCTGGACACTCTTGTCA
AGTGCTTTTACTCCAAAGAAGATTGCAAGATTGTTTTGGAAACACTTAGT
GCATCAGGAATTGTTCAAGTGTTTACAAGCAGATTTATTGGACATCTCAT
AGAATGGGATTCTTTGTTAGTTACTGATCAAGTTGTCGATACTGTTTCAA
GTTCTGGTTTACGCAGTTTTGGCCTCAATGGATGCACAAAGGTTACTGCA
GAATGTGTTTCAAAGCTTTTGAACAGATGCCAAAACATTTACAACCTTGA
CATCTCAAATTGTGATCAATTGCTTGAGCCAGAGTTCTTTGACTGTCTCT
ttattcagaatttgaagaaattgaaaatcaatGGATGCAATAGACTAAAT
GGTTCTATGTTTGAGaaaatcatcAGTCAATGTCCTACTCTGGAGAATCT
CTCACTAGACGAATGTTGTAACTTGGGTGGCTTTTCTTCAACGTGTTTAC
GATTTCAAACTTTTGGCTCTTCCCTGACCTCTATTTCCATGTCCGGATGT
AAATCGGTTGATAATAAATTCGTCAGGAACTTGTGTAGTGTTACTAGGTC
AAATTTAAAATGGCTGGACATTTCGTATACCTCAGCTGATTGCCTCGCAT
TAATCTACCTTGCAGGGTTTACTTTGAAAATGGCTTGCCAAATTACTAAT
CTTAAAGAATTAGGAGGTACCATTCTTAGAGATGTTGAGCTCAACGAAGA
ACTAAATGATTTATTTGAGTACGATCAAAATATGAAGTGTGCTAGTCCTG
AAATAAAATGTAAAGATTGTCTTGAAAGACAAAGAGAAGCAACATTACTT
GAGGACTATTATAAAATAGGGAATATTATTCCATGTAATTCTAAAACTAA
TTATGAAGATTGGGATGTCATTTCTTTATCACaagaagaaaatcttttgt
caTGCACCTGTAAGGACCTTCAGCAGAACAAGATGACAACAATACCTATT
GATCCAGGTTTAGAAAAGGGGCAGCTGTTTGAACCGAAATTGATATACTT
GGATATAAACAATCTTGAATTTTATTACAATGAATTTGGGCGCAAGTGCC
TGGAATTGTTTATGGACTCCAATAAATGTCTTGAACATTTCTTCATTTCT
TGGAATAATCTTGATAATGAAATGTTAAAATGTATTTCGAAGAATGATAT
TAACCTAAAAACATTTCATCTGGATAATTGTAGTGGCTTGATAGGTTTGA
ACTGGGATGGGTTTGGTCAATATTGTCATTCATTGGTTGATTTGAATTTG
ACTGGTGCCTCATTTTTAACAGATCGTGCAATCATCCAGTTgattcaaaa
caatcaaaatataAGGAAACTTGGACTTTCAGAAGCATCGATATCAGATG
AAGTTGTTCATTTTATTACTGATTTATTAAGCGAAAAGCTCGAATTGATA
GATTTGTCTTGGTGTGAAAACATAACCAATGCTGCTACTATCAATCTGAT
TACAAAATGTACTAAATTGGATTGTGTGAACTTGCGACAGGGTCAAGTTT
CTTCATCTACGGTTGAAGCTATTGGAAAATATCAAACAAATCTTTCTTCC
ATTGGACTAAGTGGTTTGAAAGGACTCCATCAAGACTTGGCTTCTCAGAA
CCCTTCTTTATTACACCTTACATCTCTTCAAAAATTGACATCAATAGATC
TTAGTTGGAATTGTATGGTTTCAGATGACACAATTATAGCCCTCTTCGGT
AACATGCCAGTACTTGAAGAAGCAGTTCTGATCGGCTTAAAATGTCTTAG
TTCCAACCCATTCCTACCAATGATCTATAATTACAAAGAATGGTACAGAT
TGAAAACAGACATAACGAAGAAGATATTGGCTGAAAAATCTGACTTGGAA
GAAAGTGAGAAAAAATTGCTCAggaaaaatatacataaacACCAGTTCAT
CGAAGCAGATTTTCATGTACCTTTCCGATCCAAAGTGTATCAGCCAAGAC
TAAAGAACCTTTCTTTAAGCTACTGCGACAAAGTAGACGATGACCAGCTA
TCTGACATTGTCTCGGTATGTAGAGGAACCTTGGTTATAACAGGCTATTT
TGGAGAAGCTATCGAGCCAAAATGGAGGTATGATCAATATGTTGAGACCT
TTATTGTTAATTAACCATAATATTAGCACAAGCTTTTTTATCTTCCCTGC
TGATTTTAACTCAACCAACTCACATATGCATCGTATTGGTTGAAATTCAC
ACCTGGTTCACAAGGTATTTTAACTATTTTTAAATAAACTTTatactttt
taaagttttaattaTATCACAGCACTCAAAAAGGGAAGCAGAGACACTTT
CCCCCTAGCATGACTTTCTGATTTGTGCTTTCATGCTTTTAGAACAAATC
ACACCTAAAAAGCGTAAATGGTCCAGTATTATTTATAATGAGTGAGCATG
AGTGAGATCTGAGCGATGTTTATTTCATCAAATTGATAATTGAACTttgc
ttaaccctttaagtgccaatgtcgagtTTATtggacatgggctatatagg
agggcgtcctgtaatgcccagtttgagttagaaatcgtcattttttgtcG
AACTCGTAGAATTGGATTGTGTTTAATGGTTAAGCGAACAAAAGTgtgtc
tttccagcgagattttgag
Run BLAST on NCBI

protein sequence of TCONS_00069574-protein

>TCONS_00069574-protein ID=TCONS_00069574-protein|Name=TCONS_00069574-protein|organism=Clytia hemisphaerica|type=polypeptide|length=720bp
TMQVISLYSQCLDTLVKCFYSKEDCKIVLETLSASGIVQVFTSRFIGHLI
EWDSLLVTDQVVDTVSSSGLRSFGLNGCTKVTAECVSKLLNRCQNIYNLD
ISNCDQLLEPEFFDCLFIQNLKKLKINGCNRLNGSMFEKIISQCPTLENL
SLDECCNLGGFSSTCLRFQTFGSSLTSISMSGCKSVDNKFVRNLCSVTRS
NLKWLDISYTSADCLALIYLAGFTLKMACQITNLKELGGTILRDVELNEE
LNDLFEYDQNMKCASPEIKCKDCLERQREATLLEDYYKIGNIIPCNSKTN
YEDWDVISLSQEENLLSCTCKDLQQNKMTTIPIDPGLEKGQLFEPKLIYL
DINNLEFYYNEFGRKCLELFMDSNKCLEHFFISWNNLDNEMLKCISKNDI
NLKTFHLDNCSGLIGLNWDGFGQYCHSLVDLNLTGASFLTDRAIIQLIQN
NQNIRKLGLSEASISDEVVHFITDLLSEKLELIDLSWCENITNAATINLI
TKCTKLDCVNLRQGQVSSSTVEAIGKYQTNLSSIGLSGLKGLHQDLASQN
PSLLHLTSLQKLTSIDLSWNCMVSDDTIIALFGNMPVLEEAVLIGLKCLS
SNPFLPMIYNYKEWYRLKTDITKKILAEKSDLEESEKKLLRKNIHKHQFI
EADFHVPFRSKVYQPRLKNLSLSYCDKVDDDQLSDIVSVCRGTLVITGYF
GEAIEPKWRYDQYVETFIVN
Run BLAST on NCBI

transcript from alignment at scaffold_502:101278..106888-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069574 ID=TCONS_00069574|Name=TCONS_00069574|organism=Clytia hemisphaerica|type=transcript|length=5611bp|location=Sequence derived from alignment at scaffold_502:101278..106888- (Clytia hemisphaerica)
TACAATGCAAGTTATATCACTTTATTCCCAATGTCTGGACACTCTTGTCA
AGTGCTTTTACTCCAAAGAAGATTGCAAGATTGTTTTGGAAACACTTAGT
GCATCAGGAATTGTTCAAGTGTTTACAAGCAGATTTATTGGACATCTCAT
AGAATGGGATTCTTTGTTAGTTACTGATCAAGTTGTCGATACTGTTTCAA
GTTCTGGTTTACGCAGTTTTGGCCTCAATGGATGCACAAAGGTTACTGCA
GAATGTGTTTCAAAGCTTTTGAACAGGTGAATATGTTCATTATTTATAAA
ATTTCTTGATTTATCTAATTTGATTGACACCTTGTATTTTCCTTCTTTAT
AAAAACTTAATAAGGACCTGAAAAAATCATTGAGACTAATACAGTAGGCA
ATATTTTGTGTTTCAATTATGCTGATTACACGGGGCATTTGAAATTAATT
TAACGTCAAGTTGTTTTGATTCTAACAAAAATAGCACTTTGGTTCTTATT
CTCACTCTTTTCTTTTCAGATGCCAAAACATTTACAACCTTGACATCTCA
AATTGTGATCAATTGCTTGAGCCAGAGTTCTTTGACTGTCTCTTTATTCA
GAATTTGAAGAAATTGAAAATCAATGGATGCAATAGACTAAATGGTTCTA
TGTTTGAGGTGAGAAATTTGGATAAATTTCCTATAGAGGTTTGCATTTAT
ATCCCAATTAAGGTGTATTATATACGTAAATAAGTTTATGCTAATTGTTT
TTTTCCTTGAAGTATTTCACTTTCCTTTTTTAGAAAATCATCAGTCAATG
TCCTACTCTGGAGAATCTCTCACTAGACGAATGTTGTAACTTGGGTGGCT
TTTCTTCAACGTGTTTACGATTTCAAACTTTTGGCTCTTCCCTGACCTCT
ATTTCCATGTCCGGATGTAAATCGGTTGATAATAAATTCGTCAGGAACTT
GTGTAGTGTTACTAGGTCAAATTTAAAATGGCTGGACATTTCGTATACCT
CAGCTGATTGCCTCGCATTAATCTACCTTGCAGGGTTTACTTTGAAAATG
GCTTGCCAAATTACTAATCTTAAAGAATTAGGAGGTACCATTCTTAGAGA
TGTTGAGCTCAACGAAGAACTAAATGATTTATTTGAGTACGATCAAAATA
TGAAGTGTGCTAGTCCTGAAATAAAATGTAAAGATTGTCTTGAAAGACAA
AGAGAAGCAACATTACTTGAGGACTATTATAAAATAGGGAATATTATTCC
ATGTAATTCTAAAACTAATTATGAAGATTGGGATGTCATTTCTTTATCAC
AAGAAGAAAATCTTTTGTCATGCACCTGTAAGGACCTTCAGCAGAACAAG
ATGACAACAATACCTATTGATCCAGGTTTAGAAAAGGGGCAGCTGTTTGA
ACCGAAATTGATATACTTGGATATAAACAATCTTGAATTTTATTACAATG
AATTTGGGCGCAAGTGCCTGGAATTGTTTATGGACTCCAATAAATGTCTT
GAACATTTCTTCATTTCTTGGAATAATCTTGATAATGAAATGTTAAAATG
TATTTCGAAGAATGATATTAACCTAAAAACATTTCATCTGGTAAGTAATA
ACTCACTTATTTGAGATATATTTTCGGGTGCTAGTTTAGCAAGATGGAAG
GGTATGTCAGAGCCAAAGCTCCAAAATTGACCCATAGAGAGACTGAATTT
TGGAAATCTTGTCAAATTTTGGACGCTTTCGCAAACATTAAAAAATTTCC
AATTAACTTTGTTTATTGTAGGATAATTGTAGTGGCTTGATAGGTTTGAA
CTGGGATGGGTTTGGTCAATATTGTCATTCATTGGTTGATTTGAATTTGA
CTGGTGCCTCATTTTTAACAGATCGTGCAATCATCCAGTTGATTCAAAAC
AATCAAAATATAAGGAAACTTGGACTTTCAGAAGCATCGATATCAGATGA
AGTTGTTCATTTTATTACTGATTTATTAAGCGAAAAGGTACTTCCATTTG
ACGAGCTTCCTCATCTTTTAGATCTCTCAAGATTGGGATGCTGAATGTTT
GAGTTTCCCATAAATTTCAAACATTGTTGTCGCTGCTAATTTCTATTGTG
AACTTATATAAAACAGCAAACTTCAGCGATTATAGCGAAGTCCCTAATTA
GCTACCTGTTTGATTTTAGCTCGAATTGATAGATTTGTCTTGGTGTGAAA
ACATAACCAATGCTGCTACTATCAATCTGATTACAAAATGTACTAAATTG
GATTGTGTGAACTTGCGACAGGGTCAAGTTTCTTCATCTACGGTTGAAGC
TATTGGAAAATATCAAACAAATCTTTCTTCCATTGGACTAAGTGGTTTGA
AAGGTATGCTTAGATTTAAAATAGATTAAGAGCATAGAATGCACCCCCCT
GAGCTTAGGGGGGGGGGCTAAACCATTTTTGCTTGATTGGGGCTGTATTT
TTCAAAAAATACTGGGGGCTAGCTTGCTAGGGGGGGCTGAGTGTTGTGTA
ATAGAACTGGGGGCAGAGCTGATAGATTGAAGATATTTCAAATTATGTTA
AAAATCTCTGCTGTGGGAAAGGGGAAAAATCTGTGGGAAAAAATCTATCG
AGAATTTGCATGCAAAATTTCTTTGATATTTTGCTTTGTGAAGGTGGGGG
CTATGTTTCTAGAATTTAGCCGGGGGCTATTATTCTTAGCTCCCCCTGAA
AAATGCTGTGGGCTGGACCCCTCTGCACACTATGAAGAGAAAAATTGCCG
AATTTTGACACGCATCCCTCTGATATTATTTGGTTATGGGATGTTCATCG
TTTATAAAATTCCCGTCGGATTTTTCTTTCTAAACCTTTTTAAGAAAACT
GAAACAGGTTAGTCCATTTGGGTAACTCTCTGACGGGGACCTTATACACG
ATTAGCATCCCCTAAGTCAAAACATTCAGAGGGGATGCTTGCACTCTGTT
AGTCGTTCTCAGATTTATCTCTAGTAGGGGGCCAATCCTTAGGATCCGTG
ACATCTTTTATGCGACACAACCGCGTGTAGTTAGTTCGAAAGTTAGGAAG
TTTTTTAAGACTTTTTTGAGAGGGGGGCGGCGAATAAGGCCCGACAAAAG
CTTTTATGACTAAAAAGCTGACGTTTACAGGCCTTCCTACTTTCGAACTA
ACCACATGCGGTTGCGTCGCTTAAAAGGTGTCACGGATCCTAAGGATTGG
TCCCCTACTACTCATCTTGCCAATGAAGTTTAATTTAAATACAGGAATAG
TTGAATCTATTATTTCTATCTTCTGTACAGGACTCCATCAAGACTTGGCT
TCTCAGAACCCTTCTTTATTACACCTTACATCTCTTCAAAAATTGACATC
AATAGATCTTAGTTGGAATTGTATGGTTTCAGATGACACAATTATAGCCC
TCTTCGGTAACATGCCAGTACTTGAAGAAGCAGTTCTGATCGGCTTAAAA
TGTCTTAGTTCCAACCCATTCCTACCAATGATCTATAATTACAAAGAATG
GTACAGATTGAAAACAGACATAACGAAGAAGATATTGGCTGAAAAATCTG
ACTTGGAAGAAAGTGAGAAAAAATTGCTCAGGAAAAATATACATAAACAC
CAGGTTAGTAAATAAGTAGGATTATTGTCACAAGGTTGTTCTTAAAAAAA
TGTTCTCAAACCTCGAGCTTCTCTTTACCATTTTATACTAGCAGGGGAGG
TGAGGTGAACCTGAGGTACTTGACATCTTTTCTCTCTCTCTTTTCTTTCT
CTACCTGTAGATGTACTCAATTACTCTATAAGAAATACGAGAATTTTTAA
AGTCCGAAATTTCAAAATACGATTGACGTCGACAATGATAAATAAGAATA
GTTACTAAAGTGTATCCAGATATAATTTGCAGTGGAAACAAGAATGCCTG
TAACTTTTGATAGTCCGATATAATTTTTTTGCTTCTTTTAGAGAATCAAA
AGCGCTATTTTTGAATTTATTTTTTGTTGAAAAATACGTGATTTTTAGCG
GTTAAATTTGCGATTGCAAAAATTGAGCTTTTTTTCTATTTTCGCTACAA
CGTTCATTTTACACTAGTGGTAGTTCAACCTTAGGTTAAGAAAATTGTCA
AATTTCAAGGCAAACGGAAAAGTCCTTCGGAAGATATGGGACCCGAAATA
CCCCTTGGTAGCACTTTTCTGTGAAACATCAAATCTCCAAATTTTTAATA
AAAACGGGGGATTATGATGGGATGATAAAACAGTTTTTCAATCATATATT
ATAACATATTTTACGATCTTTTTACAATAATGACCTCATAGCCAAACTGT
GCTTTAATGTTTTGGGAATTAGCAAAGTTCTTTTATTACTTAAAAATAAC
AAAGGCAATATCAGTTCAATATGCTTATCGTTTCAATAAAGACAATCAAA
TTGTGTATTCACTTTGTTTCGAAATGATCAATGATACCAATAACACCAAT
GCAACAAATAACACTTTCCAACTTTTAATTGCACTGTTCAAAAAAGATAA
CCCCCGTTTTTAGTAAAAATTTGGAGATTTGATATTTCACAGAAAAGTGC
TACCAAGGGGTACTTTGGGTCCCATATCTTCCGAAGGACTTTTCCGTTTG
CCTTGAAATTTAACAACCTTCTTTACCTAAGGTTGAACTACCACTAGTGT
AAAAATGAACGTTATAGCATAAAAAGAAAAAAAGCTCAATTTTTGAAATC
GCAAATTTAATCGCTAAAAATCGCGAATTTTTCAACAAAAAAGACATTCA
AATATAGCGCTTTTGATTCTCTAACATAAACAAAAAAAAATTTTGGAATT
ATATTTGACTATTAAAAGTTACAGGCATTCTTGTTTCCGCTGCCAATTAT
ATCTGGATAGACTTTAATATAATACCTCTCTTTTTAGTTCATCGAAGCAG
ATTTTCATGTACCTTTCCGATCCAAAGTGTATCAGCCAAGACTAAAGAAC
CTTTCTTTAAGCTACTGCGACAAAGTAGACGATGACCAGCTATCTGACAT
TGTCTCGGTATGTAGAGGAACCTTGGTTATAACAGGCTATTTTGGAGAAG
CTATCGAGCCAAAATGGAGGTATGATCAATATGTTGAGACCTTTATTGTT
AATTAACCATAATATTAGCACAAGCTTTTTTATCTTCCCTGCTGATTTTA
ACTCAACCAACTCACATATGCATCGTATTGGTTGAAATTCACACCTGGTT
CACAAGGTATTTTAACTATTTTTAAATAAACTTTATACTTTTTAAAGTTT
TAATTATATCACAGCACTCAAAAAGGGAAGCAGAGACACTTTCCCCCTAG
CATGACTTTCTGATTTGTGCTTTCATGCTTTTAGAACAAATCACACCTAA
AAAGCGTAAATGGTCCAGTATTATTTATAATGAGTGAGCATGAGTGAGAT
CTGAGCGATGTTTATTTCATCAAATTGATAATTGAACTTTGCTTAACCCT
TTAAGTGCCAATGTCGAGTTTATTGGACATGGGCTATATAGGAGGGCGTC
CTGTAATGCCCAGTTTGAGTTAGAAATCGTCATTTTTTGTCGAACTCGTA
GAATTGGATTGTGTTTAATGGTTAAGCGAACAAAAGTGTGTCTTTCCAGC
GAGATTTTGAG

Coding sequence (CDS) from alignment at scaffold_502:101278..106888-

>TCONS_00069574 ID=TCONS_00069574|Name=TCONS_00069574|organism=Clytia hemisphaerica|type=CDS|length=2163bp|location=Sequence derived from alignment at scaffold_502:101278..106888- (Clytia hemisphaerica)
ACAATGCAAGTTATATCACTTTATTCCCAATGTCTGGACACTCTTGTCAA
GTGCTTTTACTCCAAAGAAGATTGCAAGATTGTTTTGGAAACACTTAGTG
CATCAGGAATTGTTCAAGTGTTTACAAGCAGATTTATTGGACATCTCATA
GAATGGGATTCTTTGTTAGTTACTGATCAAGTTGTCGATACTGTTTCAAG
TTCTGGTTTACGCAGTTTTGGCCTCAATGGATGCACAAAGGTTACTGCAG
AATGTGTTTCAAAGCTTTTGAACAGATGCCAAAACATTTACAACCTTGAC
ATCTCAAATTGTGATCAATTGCTTGAGCCAGAGTTCTTTGACTGTCTCTT
TATTCAGAATTTGAAGAAATTGAAAATCAATGGATGCAATAGACTAAATG
GTTCTATGTTTGAGAAAATCATCAGTCAATGTCCTACTCTGGAGAATCTC
TCACTAGACGAATGTTGTAACTTGGGTGGCTTTTCTTCAACGTGTTTACG
ATTTCAAACTTTTGGCTCTTCCCTGACCTCTATTTCCATGTCCGGATGTA
AATCGGTTGATAATAAATTCGTCAGGAACTTGTGTAGTGTTACTAGGTCA
AATTTAAAATGGCTGGACATTTCGTATACCTCAGCTGATTGCCTCGCATT
AATCTACCTTGCAGGGTTTACTTTGAAAATGGCTTGCCAAATTACTAATC
TTAAAGAATTAGGAGGTACCATTCTTAGAGATGTTGAGCTCAACGAAGAA
CTAAATGATTTATTTGAGTACGATCAAAATATGAAGTGTGCTAGTCCTGA
AATAAAATGTAAAGATTGTCTTGAAAGACAAAGAGAAGCAACATTACTTG
AGGACTATTATAAAATAGGGAATATTATTCCATGTAATTCTAAAACTAAT
TATGAAGATTGGGATGTCATTTCTTTATCACAAGAAGAAAATCTTTTGTC
ATGCACCTGTAAGGACCTTCAGCAGAACAAGATGACAACAATACCTATTG
ATCCAGGTTTAGAAAAGGGGCAGCTGTTTGAACCGAAATTGATATACTTG
GATATAAACAATCTTGAATTTTATTACAATGAATTTGGGCGCAAGTGCCT
GGAATTGTTTATGGACTCCAATAAATGTCTTGAACATTTCTTCATTTCTT
GGAATAATCTTGATAATGAAATGTTAAAATGTATTTCGAAGAATGATATT
AACCTAAAAACATTTCATCTGGATAATTGTAGTGGCTTGATAGGTTTGAA
CTGGGATGGGTTTGGTCAATATTGTCATTCATTGGTTGATTTGAATTTGA
CTGGTGCCTCATTTTTAACAGATCGTGCAATCATCCAGTTGATTCAAAAC
AATCAAAATATAAGGAAACTTGGACTTTCAGAAGCATCGATATCAGATGA
AGTTGTTCATTTTATTACTGATTTATTAAGCGAAAAGCTCGAATTGATAG
ATTTGTCTTGGTGTGAAAACATAACCAATGCTGCTACTATCAATCTGATT
ACAAAATGTACTAAATTGGATTGTGTGAACTTGCGACAGGGTCAAGTTTC
TTCATCTACGGTTGAAGCTATTGGAAAATATCAAACAAATCTTTCTTCCA
TTGGACTAAGTGGTTTGAAAGGACTCCATCAAGACTTGGCTTCTCAGAAC
CCTTCTTTATTACACCTTACATCTCTTCAAAAATTGACATCAATAGATCT
TAGTTGGAATTGTATGGTTTCAGATGACACAATTATAGCCCTCTTCGGTA
ACATGCCAGTACTTGAAGAAGCAGTTCTGATCGGCTTAAAATGTCTTAGT
TCCAACCCATTCCTACCAATGATCTATAATTACAAAGAATGGTACAGATT
GAAAACAGACATAACGAAGAAGATATTGGCTGAAAAATCTGACTTGGAAG
AAAGTGAGAAAAAATTGCTCAGGAAAAATATACATAAACACCAGTTCATC
GAAGCAGATTTTCATGTACCTTTCCGATCCAAAGTGTATCAGCCAAGACT
AAAGAACCTTTCTTTAAGCTACTGCGACAAAGTAGACGATGACCAGCTAT
CTGACATTGTCTCGGTATGTAGAGGAACCTTGGTTATAACAGGCTATTTT
GGAGAAGCTATCGAGCCAAAATGGAGGTATGATCAATATGTTGAGACCTT
TATTGTTAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043340XLOC_043340Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069574-proteinTCONS_00069574-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069574-exon-scaffold_502-1575043694:106613..106888TCONS_00069574-exon-scaffold_502-1575043694:106613..106888Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1575043694:106231..106369TCONS_00069574-exon-scaffold_502-1575043694:106231..106369Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1575043694:105299..106105TCONS_00069574-exon-scaffold_502-1575043694:105299..106105Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1575043694:104902..105117TCONS_00069574-exon-scaffold_502-1575043694:104902..105117Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1575043694:104536..104719TCONS_00069574-exon-scaffold_502-1575043694:104536..104719Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1575043694:103286..103608TCONS_00069574-exon-scaffold_502-1575043694:103286..103608Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1575043694:101278..102001TCONS_00069574-exon-scaffold_502-1575043694:101278..102001Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1510915933:106613..106888TCONS_00069574-exon-scaffold_502-1510915933:106613..106888Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1510915933:106231..106369TCONS_00069574-exon-scaffold_502-1510915933:106231..106369Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1510915933:105299..106105TCONS_00069574-exon-scaffold_502-1510915933:105299..106105Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1510915933:104902..105117TCONS_00069574-exon-scaffold_502-1510915933:104902..105117Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1510915933:104536..104719TCONS_00069574-exon-scaffold_502-1510915933:104536..104719Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1510915933:103286..103608TCONS_00069574-exon-scaffold_502-1510915933:103286..103608Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1510915933:101278..102001TCONS_00069574-exon-scaffold_502-1510915933:101278..102001Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1491911889:106613..106888TCONS_00069574-exon-scaffold_502-1491911889:106613..106888Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1491911889:106231..106369TCONS_00069574-exon-scaffold_502-1491911889:106231..106369Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1491911889:105299..106105TCONS_00069574-exon-scaffold_502-1491911889:105299..106105Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1491911889:104902..105117TCONS_00069574-exon-scaffold_502-1491911889:104902..105117Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1491911889:104536..104719TCONS_00069574-exon-scaffold_502-1491911889:104536..104719Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1491911889:103286..103608TCONS_00069574-exon-scaffold_502-1491911889:103286..103608Clytia hemisphaericaexon
TCONS_00069574-exon-scaffold_502-1491911889:101278..102001TCONS_00069574-exon-scaffold_502-1491911889:101278..102001Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_502supercontigscaffold_502:101278..106888 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.37008	1.2374	1.60679	1.67788	1.89673	1.0758	0.611885	0.729052	0.413208	0.370214	0	0	0.0767321	0	0	0.18463	0.26633	0	0	0	0.348596	0	0.406781	0.52626	0	0	0.316611	0.232205	0	0.401194
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675L_dom-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069574 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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