TCONS_00070080 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070080
Unique NameTCONS_00070080
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1862

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070080 ID=TCONS_00070080|Name=TCONS_00070080|organism=Clytia hemisphaerica|type=transcript|length=1862bp
TAACCcttgaattgaaagaaaaacagaTTAAATATCAAATATGAAAACCA
ATAAGAACAAAGAGCTAAATGTACTACCTCTTGCTATCCTCTCTTGGACT
CAAAAGATCAGATATTTTGTAAACAGTGTgccagtaaaattggtcctctT
CGgtcgccattttgtttgtttgNCTACCTCTTGTTATCCTCTCTTGGACT
CAAAAGATCAGATATTTTGTAAACAGTGTgccagtaaaattggtcctctT
CGgtcgccattttgtttgtttgctgGATGAAAATGCGGGACAAGTTTGCA
GGGCCATCACAACACGAATTCCACGAATTTCGTGCATGCTTTTAAGAACG
TGATCAGgaagtcaaaaacattttcaaaatggcgggaAAAAAAGCAGTGA
AATTCAGTTTTTTGATCGAAGACCCCAAAATTTGGAAACAATACAAAGAA
TCGTACGCTGTTGTCTTCCAAAAATTCTGTCTCAACCCGAAAAAGAGGAA
CTTGAAAGGTTTGGACGAGTGgTTTCAAAATGAGTTTGGCAATGAAATAC
ATGAAAGAAATCCTCATTCTTTGGTTAAAGAAGATTTGAAGAAATTGATG
GAATGGAAGTTAACAAGGGGGAAGTTTCGACCAAGACTAACGCAGATGAT
TGCTGAAAACAAGGAGGAAGACATACGAACTTTTTCAGAAGAAGCCTTCA
AGAATATTGACGACCCCAAGAAATGTATTGAAAGATTGTGCAAATTGAGA
GCTGTCGGCCCTGCTACTGCATCAGCCATTTTGACAGCTTATAAACCAGA
GAAATATGCTTTCATGGCAGACGAGGCCGTACAAAGTGTTTTATCTGGCA
AGATCGATTACACCCTCAAATATTACTTGAAATTTCTGGACGAGGTTCGG
TTGAAAGCAAAACAATTGTCAGCGACAGATGATACCACATGGACACCTCA
TCAGATCGAGATTTGTTTATGGACCGCTGCCATGGCAACTAAACTAGACG
TCAATATCTCGAACGAAGTCAACGAAGAGAAGACTGGTAGCAAACGTAAA
TCAACCGACCAATTGGAAACgtctaaaaaagcaaaaaaagtgaaatctaa
atattgaaaggttttttttcttcttcttgtgGTATAAGAGAATATTTGTT
TTTTAAGTGGACTTACTAGAGTTCAAGTTTCAAGTAGGTTGTCATTCGTT
TTAATTGATAACTTTGGGATTGATACCAGATATGGGAACACATAAAGACA
ATTTGGTTTTGAAAATCACattgaacaattttaaaaactacAAAAACTCA
ACAAAAAAAACCTTCTacgaaaattattttgatgaagaaTTGGAACTGCA
AATCTTCGAAAGTTGCCAAATTATTTTACAACAAGATTAAATTAAGATGG
ATTATGTGTTGTATATGGAAATTGTTTAaatttattattgtattcgtACT
TCCTAGTTCGTTCATAGAGACAAGGAACGCCCTACCGATGTAAGTGATAA
TCGAGTACAATTTGTAAATAACATTCATTCAAATAGTTACTCAAGTACTG
TATAATTGTTGTCAATTTTGGAAGAATCTTCAATAATGTGAAAACTCTTC
ACGCAGCTCAAGCTGAAATAAAGAATCATTTTGATTAAATCAAGTCACGG
TACGGTTATTGGAAAgggttttgttatttttcgttttgttgatcaagaaa
ccattttgttgaaaatttttcacgGATCCATCTTTTTGGTGCAACCttgg
gtttttttctttggtttgttccataacttttttatttcaagggataataa
gatggtttgagatatttaaccTGTCATATACCTTCTTCGGTTTTTCTTCA
GTGATTTCAgac
Run BLAST on NCBI

protein sequence of TCONS_00070080-protein

>TCONS_00070080-protein ID=TCONS_00070080-protein|Name=TCONS_00070080-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MAGKKAVKFSFLIEDPKIWKQYKESYAVVFQKFCLNPKKRNLKGLDEWFQ
NEFGNEIHERNPHSLVKEDLKKLMEWKLTRGKFRPRLTQMIAENKEEDIR
TFSEEAFKNIDDPKKCIERLCKLRAVGPATASAILTAYKPEKYAFMADEA
VQSVLSGKIDYTLKYYLKFLDEVRLKAKQLSATDDTTWTPHQIEICLWTA
AMATKLDVNISNEVNEEKTGSKRKSTDQLETSKKAKKVKSKY
Run BLAST on NCBI

transcript from alignment at scaffold_513:533272..545377+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070080 ID=TCONS_00070080|Name=TCONS_00070080|organism=Clytia hemisphaerica|type=transcript|length=12106bp|location=Sequence derived from alignment at scaffold_513:533272..545377+ (Clytia hemisphaerica)
TAACCcttgaattgaaagaaaaacagaTTAAATATCAAATATGAAAACCA
ATAAGAACAAAGAGCTAAATGTACTACCTCTTGCTATCCTCTCTTGGACT
CAAAAGATCAGATATTTTGTAAACAGTGTgccagtaaaattggtcctctT
CGgtcgccattttgtttgtttgNCTACCTCTTGTTATCCTCTCTTGGACT
CAAAAGATCAGATATTTTGTAAACAGTGTgccagtaaaattggtcctctT
CGgtcgccattttgtttgtttgctgGATGAAAATGCGGGACAAGTTTGCA
GGGCCATCACAACACGAATTCCACGAATTTCGTGCATGCTTTTAAGAACG
TGATCAGgaagtcaaaaacattttcaaaatggcgggaAAAAAAGCAGTGA
AATTCAGTTTTTTGATCGAAGACCCCAAAATTTGGAAACAATACAAAGAA
TCGTACGCTGTTGTCTTCCAAAAATTCTGTCTCAACCCGAAAAAGAGGAA
CTTGAAAGGTTTGGACGAGTGGTGAGTATATATTTTTGGTTATGTTATTT
TAATTAGAAGTTCTGAAGTTACACAAACAAAAGGCACACTAACACACCAG
TGTCACCTCACCCAAAGCAAAGCACCAAGAAGTGTCAAGAGATTCACTCA
ATTTCATTAATTGCAGTAGAATTTGTTACCACAATTTTATTGTAAACACC
CCTTTTATATTTTGAGTAAACCACCATTGCAGCCCAAGGGGTACTTGGCA
AAAAGGGGTACACCGATAATGGTCAGgacagggtaccttttttcacctcc
atGACCACCATGACCATGAGTCCTAGTTAGGgtcacaaaaacacaaaaat
agaaaaataagaccCTCACAGGGTACTTAGGTAAAATAGggaagattttg
agaaaattttggaatagacctttccagacgatctcaataccaatagacct
tttttcaaagaggacgtcctgttgttgaataattatgtagtccagccata
aaaacaatgatagagccatgcataattactgtatcatgcatattgtaata
attatgcatggttttatcattgtttttctgctggactacataattattca
acagggtggcctctttgaaaaaaggtctatcgaacggaatcaacgattga
accagtcgaacaacaatcgaaccaatcgaatattacccagaattttgacg
ttcgattgagattcgattgcgttcgacaatcaaatttcaatcggcCGATT
TCGTtcaatttggttcgactggttcgatcgtcgattccgttcgattgaga
ccGTCttgaccttttcgcctttccatccgcccatattgaattgtatgcaa
aaaatatgaaaaatcatcagcaaaggtaaaaaataatccttattcggctg
acagtaaattattctcctgggaatagagtcGCCAAATGACAATGATCAAG
TCAAAACATTGATACtgtatgacgtcataattactgcttttcagttttcc
gtgttttgaaagtttgatatgatgtgtgtactccgtcttcgtggcatttc
tttttaatggcatgaaaacagaatatgctatgtctttaagaacaaatttc
taaaaggcttttgttgttctgttaatattttttttttggattgagaaatt
ccatcttttattgttctaatgattataatatttatttataagatgctttg
ttgtctttttaatctttgtgtaaacttgcatgcgttttgcatactttcca
actaaatccaaccacggctttagtgttcctctatttttgcatacaattca
agataacggatggaaaggcgaaaaggtcaaTATGCCCTCCCCCTGTGCTG
TCTGATTTAATGTAAGATTATTTTGGTGTTTGGTGTCACTTCTATTGAAT
TAAAtttaaatcttcaattttagccTGTTTTCAACTTTTTAGTTGACTTT
AAGGGATTTAACATTTGGTTGCATTAAacccagttacagatttggcgtat
tttGCGATCAAAGTtctctacaggaggtgctagagattttcggggaaaat
tttggagactcaatttgattttttctgattccctacaaaaagttcttgaa
atccactgtaaatcagcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtaaaaattcattggctttcaaaatctg
ctccccacaagagttcatgatttttaggggtcaattttcgcttagtagcc
tatctttgagacactATATCTgcaaactacttgagatatcaaggtgagat
tttcagagtcttattttcttgtgtgatagatcatttggtcaaaatttcat
caaaatttaagagggtgaggtatcagactttctttattctgaagatttta
aaaaaaaatggctctttaaaaaaatcatttatctgaaacaaaactttcaa
tttcaatctattttcaacatttttagttgaCTTTAAGGCCTTTGTATTTG
CTTCCATTGAAGCTTTAGTTCCGTTTAAGATTTGGTGTTTCTTTCTCTTA
GAGTCGCCAAACCCACTACTGGcttaatttaataaaaaaaattttaggtt
ttttttttatgaaataaatcTTCAATTAGAAGCTATTTTGAACATTACTG
TTTGAATTTTAGGCATTCTTAATAGGTTCCATTGAAGTTTTAGCGCTGat
acagatttggcgtattttGCGATAAAAAACGCCGATTCTGTTTTTGGCAT
AAtttaataaaagttcattttgggatTACTGCTATTGAATTTTTAgccta
ttttcaactttttagtcGACTTTAAGGGCTTTTAGCATTTGGTTGTATTG
AAACTATagcccagttacagatttggcgtattttGCGATCAAAGTCAATG
AATTAGCTTTTGtcctattttgataaaagaccATTTTGAGACTATTTGTC
TTGAACAAAATTTTCCAATCCAATctattttcaagcaatttataATCATT
TTTGGTTTGTATATTTTGAattaaatcttcaatttttgtctatttttaac
attttggttGACTTTCAAGCTTTATAATTTGGTTTCATTGAAGCTCTAGC
TCAGTTACAGATTTCGCATATTTTACGATAAAAGTCACCGAATttgtttt
tggcctattttgatGAAAGgccattttgagattttttgtcttaaacaaaa
ttttccaatccaatctattttcaacattttagttGACTTTAAGGCCTTTG
CACTTGTTTCAATTGATGCTTTCGTTTTGTTACATATTATTTGgtgtatt
tttagataaaagttgccgaatttgtttttggcctattttgataaaagacT
ATTTAGGGattatttattttaaacaaaatattcaactttaatctattttc
aacattttagttGACTTTAAGGCCTTTGTACTTGTTTCAATTGATGCTTT
CGTACACTATTGGCctgatttgataaaaaaaacattttggttTTGTTTCT
TGTGACAAAGATCTTCAGTTTGAAGCTATTTtaatatttcaaacattttt
agtTGAGTTTTAGGCCTTCCCAATAGTTTCAATGGAAGTTTTAGGGCTAA
TACAGATATGGCGTATTTTGCGATATAAGTCGCTGAATTTGTATTtggtt
tattttgataaaagataattttgagattattcGTCTTGAATAAAATCTTC
AAATCCaatctattttcaacatttttactTGACTTTAAAACCTTAACttt
ttgtttcattaaaactatAGCCCAGTTACAGGTTTGGCGTATTTTGCGTA
ACCGATTTTGTTTTTGGCTTGATTTAATAAAATATCATTTGGGATTACTT
AaagtgacattttctttcataAAGGAAAGTTGAATTTCAGCTAAAGGAAG
GAAATTTGttagaaaatgtcaaaaattttggcAAGATTCATAAAAATGCA
TCAAATAATGGGAAAGGGGATAAATCCAGCCTTACAttgactttatccag
tctagaacaaaaaatctgaagaaaagctcggtaaaaacaaatgaaaatta
tattataAAGGTTTTAAACCTCTTCTAGGCTTAAGTTTCaaagagaaaaa
cttttttgtggtgcacccggtacaTAGATGTGAAGGAAGCGAGCTTAAAA
TTATCATTGCAAAGAGGCCTGAAGCCAGGACGGCTAATTGTTCTAGAGAC
TGACCAAAAAAAGAATGTAAGATTAGATTAGATTAGCTTGAGAATAAGAC
AACTAAAATTTGTATAATAGCACCCTAATGTAACTCTGTCTGCTTGCAGA
GAGGTGTTGGAATTTTGGGCCGGAAAATCCATCCAAAGAGTAAAAGTGGG
TTGCTAAACTGTTTCAAAATGGCTAGCATAGCTACTTTGCAAGGCTGTAA
CTTAACAAGTTTACGAAAATTTGATTACATACTTCAAATAAGCAAGCTTT
ATGAACTAGTGTACAGAGATATAAACCATATCATATCATGTTTTTTAAAC
cagtaaaataaattttgagttttggacctaccgggaggtcctttaatttg
acctttgtccgttcgtctgttacaagcttttctcaggatcggctcattag
tttttttatttttggcacaatgatgcaaaatggtgattcccaaaaagtga
cggagcccgattttcgaaaaaaaaattttgggcaaaggcaaatttaggcc
aaaaagtgcctaaaaatggggttttttggaattgtgtgaaattgcttcat
tattttttttctgattttatgcataaagatggggccaaggttctctaaaa
agtggctcaaccagttttttttggaaaatttttttttggccataaaaatc
gattttcttatttggggaaattcctttgtgtcattttttgggaaaaagag
catttctcgcgattggattgatatttttttctgaatttttggacctaccc
cggtggaggtcctataaaattaaccgttgtatgttcgttcgttcgtgcgt
tcgttagttaccagcttttctcgagattggctcattatttttttctgatt
ttttgcacaaagatgcataactataaaccctcgaatgtgaaggagcccga
ttttcaagaaaaaaaattttttaggcaaatttgagccaaaaaacggctaa
aaaacggggtttttggactttgaaaaattggatcattaattttttctgat
tttttgtatgaaaggaGGGTAaaatcataggtaaaagatggcttaagcag
atttttgcaaaaaaaaatttttggctcaaaaaacgcatgtttatctataa
gaatcactattaataagcatacatcaatgNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ngtgttctgaatgattgtttaatggtcacgctcacgtagatatcaattat
atatgtgttaaatgcataaccaggtaggtccataaaagtatcacttgttg
cactttgatgtaaaatggtaatataTAAAATCTGATGAggccctttttca
aaaaatattttttgggtaaatttgggccaaaatatgcctaaaaatggggt
tttctggacttgtgaaattgtttcatttgttttttctaattttttggacG
AAGATAGAAagccgtaaaaatcggattttcttattttgggaaattccctt
ttgtcatatttagggggaaatgagcatttctcgtgATTGACTTGgtattt
tctcttattttttgCATCGTTGATATAAAATGGTGATATTTAATTTCTGA
ttgagcccgatttttgaaagaataattctttgggcaaatttgggctaaaa
agtgCCTAACATGGGTTTTTTCTGACTTTGGGGAAAATCGCACACTTTAT
CGTCAATAGGGAAACCAcggtaaaatatttattcactcCAGTATCTACGC
TTATAAGTCATACGACTTTAACTATAATTCACAGGTCGATATTAATTTGA
GATGTGATACTCGTGGTAATCTAATCTGTTCTGCTCACtacactttctta
ctctcttTCTATTTGtcttattttgatcaacaggtaggtccattcagcat
gttacTTGTTTAGTCTTTGTTTTTCCTGAATGCTATTTTTCAAAGACAGG
TTTAAAGAAGAATGGTGGTAGCTGGACTTGTCATCCATAGTTATCATACC
CAACTCAAATTTGATTTATGAAAGCTCTAAATTTAAAAAGCATTTGCttg
aatttttaaacaaatgCTCTTATCTTATTTCCATctctaaatagaccttt
tttcaaagaggccaccctgttgaataattatgtagtccagcagaaaaaca
atgataaaaccatgcataattattacaatatgcatgatacagtaattatg
catggctctatcattgtttttctgctggactacataattattcaacagga
cgtcctctttgaaaaaaggtctatttaagttACTCCTTCTTCTTTTTAAT
ACCAAAAAGCTTGGATTCATAGCGTGATCTGTTTTCTCTCAAACTCGATT
CAAACTTGtactgtaaaattttttttgaaacaccttGTATAATTCTACAT
TAGCTACTAATGCctgattttataaaaaaatatcaaatcgagaaaatttg
aattgaccAAAGAGCATGTTATATAAGAATTCCCTTTCTAATTTCAAGAA
TATCAGATCAAATTTTATGTATCTGTGAGTAGCGGGTGCAAAGTTCAATA
CAACTTTTCGACCGTattcgcgcggtcaggcgcgtgccacttaattattt
ctttattcccccaaactcgatccaatccttttttgacacatttttctatt
gtctataggtgcgaaaaaaggactgggacggttttattGGGATTAAGCGG
ACAAGAAAATGCCcgcacggcaattggcggctacggtcgaaaaggtgtat
tttgtgTATTGATTCCCTTATCTGTTCTTTCCAGGGTAGGACTCAGCTCT
GTTTAGCTGTAAGATCTTCTGTCAACAACattacaattttttatttcata
ggTTTCAAAATGAGTTTGGCAATGAAATACATGAAAGAAATCCTCATTCT
TTGGTTAAAGAAGATTTGAAGAAATTGATGGAATGGAAGTTAACAGTAAG
TGAATAGTGAGATTTTTATGATTAAGTCGTTTTGTATTCGAGTCCTTTCC
GAGTCTATATTTTAGCTTTCATTTCTGCTTTTAAAAATCCATTATTCAAT
TTAACTTTTTGTAAGAAACAATGTGCTTTTTCTTTGGCTACgtatttcta
taaaaactgGACTAAGAAAGTGTTGATTTTTAAATTAAGATCATAAGCCT
GAAAAATTACGAAATATTAAGAAGAGCCGAGCCTGGCCTGAAGAAGGGTT
TATAAAAACATACATGTTTTATTTAATATAagtataacgtttataagcat
actgagacctgaatttgtctaaaaaataagcatattactgAGCTTGCTTT
TGAGGTATGTtagtaaaaattctttaatttaattaatttaaaGAAATACA
AGCGTAAACGCAGCAATCGTTCACAACTTTCCTGAAAAATCTTTGTGTCA
TTACTTATTTCCCTATCCTCATGTATAGCAAcgacagattttggaaaaat
tggagactttttcggaaaaataagcatatgatGATAAACATACTTCGAGC
GTGAGTCTAAAATATCTCTAAGCATAACTGAGCTTGTTTCCCAAaaaaca
tatgcttataaaaaaaaacatgtatgtatGTAAATATGTATGTATATATA
TCGCCTTTCCTCatctaaacagacgacggtattttggtgttttaacCGTC
GTCGTGGACGGCGATTTTGGAAACATGTCAACTTTTGCTTTATACTGTCT
CCTTATACTCCgctattaccgagtttatgtatgtgcgTTCCTCtacgacg
gagacggtaaggttctcatttaactagatcctgaccaactgaggacgaca
gtAAATCCCCACTTTTACCGCCCTCGATTTTACGGGTCAAAaatgcgggt
tattccaaatcgcttcggtccgtcctcaaaagtgcaaatacataaactcg
ctacgaatttaccgtcgtcctcagtagGTCAGGATCTAGAAATATCAAAA
GCTAACCGTTTCCATCCGTACAGAGCAAATTAGagaacgacatgtcgcct
tcgGTGACGACCCGCATGAGCAGCCCCGCAActgtagccgtagaatatct
ccgatacataatctcgctactGTATTATTACAGAGGGGGAAGTTTCGACC
AAGACTAACGCAGATGATTGCTGAAAACAAGGAGGAAGACATACGAACTT
TTTCAGAAGAAGCCTTCAAGAATATTGACGACCCCAAGAAATGTATTGAA
AGATTGTGCAAATTGAGAGCTGTCGGCCCTGCTACTGCATCAGGTTAGCA
TTTTAACATACGTATCTACCTTTCTACCTTCTTGGTAGAAAATTTGTCTA
CAAAAAGTGACGTATAGTacctttttgatgattttagaTTCATTTGAGCA
TTACATCGTTTAAAACTGAATGCTACTTTAAAAGACGTTAATGATCGGAC
AGTTGATCGGTTGTGATCGGATAGCTGATAGAGGATCGTATTAAAGTACC
TGTCTATCCTGTGGCTCTTACAGATTTTTAGACGATGAATTGAGCAAATC
CACAAAAGAAACGCGCAATATTATTTtgtatattcatgatatgcaccatt
gcgaTGTCATCCACGGAACCAACATCTGGTTAGTTGTAAGTGAGGTAAAA
TTagccaatacgtcactttcaaccaatcagctgttgggtcagttgaagac
attgcaatggtgcatatcatgaatatacaAAATAATATTGCGCGTTTCTT
TTGTGGATTTGCTCATGGTCATCTTGATAAGATATTTCAATGGCTATCGC
GAAAGATTTGCTGCTTGAATCGAACTCTTTTAATGCTTTCTGTTATCATT
TACTCTTgactcccgaatagacgggggggggNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNgggggggggtccgaataagcaggg
ggttaggaaaattttctaaattctaataagcgggggggatggaataagag
ggggggatggaataagaggggggggtaGTTTGAAGACAGATTTTTTTCTA
ACTGGTATCAATTTATTAGCtatttctgaaatctgaaatcaagattgttc
ttaatttgttcttagttttttttgcgaaaattgaGTGTTCCTATGTTAAG
ATGTAAGTTTTGTTGTATAGTAGGGTccaacaaaaataataaaagaactA
ATTAAATTGATCTGGTCTTAATAAGGGGTTTTCGGTAAATTATTCAAATT
TCATTCTATTTTCACTTTCAGCCATTTTGACAGCTTATAAACCAGAGAAA
TATGCTTTCATGGCAGACGAGGCCGTACAAAGTGTTTTATCTGGCAAGAT
CGATTACACCCTCAAATATTACTTGAAATTTCTGGACGAGGTTCGGTTGA
AAGCAAAACAATTGTCAGCGACAGGTAAAAATAATACTTAATTCGAATTA
ATTTTCACGTTTAGTTAAGGCGCGTCCcaatttaggtgtcaatttaCAGT
TAACTCTGGCTATTCAAACTCGAACTCAAGCGGGGAttttaatttgttcg
aattagagaaagattcgaataatagaagttcgaattagcgagtcCACTGT
ATACTTACATAAAAAGAAGCTTGTATAGCATAATGTAGGACATTTTATGG
AAATGGCTGTGTCGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naaccccccccccccccggtaattaggtcccccccgtttatttaatttga
aaattttttccaaccccctccctTTATTTAGCACCTAAGAGTaattattt
aactttttgactgAAGGCAATGATTACATTTGAGAATGagaaatacagtt
gactctctccgATCTTCAAGGTTACAAAATTATATCTTCGAATTATATAA
AGATTCGGACTACGGGGAATATTTTATAAGACTTTCTAGCTGAGGtaacc
aatattttagttcgaatcaTAGAAAGTTCGAATAAGAGAAAGTTTACTGT
ATTCTCCTTTTTCCTGCAACAGATGATACCACATGGACACCTCATCAGAT
CGAGATTTGTTTATGGACCGCTGCCATGGCAACTAAACTAGACGTCAATA
TCTCGAACGAAGTCAACGAAGAGAAGACTGGTAGCAAACGTAAATCAACC
GACCAATTGGAAACgtctaaaaaagcaaaaaaagtgaaatctaaatattg
aaaggttttttttcttcttcttgtgGTATAAGAGAATATTTGTTTTTTAA
GTGGACTTACTAGAGTTCAAGTTTCAAGTAGGTTGTCATTCGTTTTAATT
GATAACTTTGGGATTGATACCAGATATGGGAACACATAAAGACAATTTGG
TTTTGAAAATCACattgaacaattttaaaaactacAAAAACTCAACAAAA
AAAACCTTCTacgaaaattattttgatgaagaaTTGGAACTGCAAATCTT
CGAAAGTTGCCAAATTATTTTACAACAAGATTAAATTAAGATGGATTATG
TGTTGTATATGGAAATTGTTTAaatttattattgtattcgtACTTCCTAG
TTCGTTCATAGAGACAAGGAACGCCCTACCGATGTAAGTGATAATCGAGT
ACAATTTGTAAATAACATTCATTCAAATAGTTACTCAAGTACTGTATAAT
TGTTGTCAATTTTGGAAGAATCTTCAATAATGTGAAAACTCTTCACGCAG
CTCAAGCTGAAATAAAGAATCATTTTGATTAAATCAAGTCACGGTACGGT
TATTGGAAAgggttttgttatttttcgttttgttgatcaagaaaccattt
tgttgaaaatttttcacgGATCCATCTTTTTGGTGCAACCttgggttttt
ttctttggtttgttccataacttttttatttcaagggataataagatggt
ttgagatatttaaccTGTCATATACCTTCTTCGGTTTTTCTTCAGTGATT
TCAgac

Coding sequence (CDS) from alignment at scaffold_513:533272..545377+

>TCONS_00070080 ID=TCONS_00070080|Name=TCONS_00070080|organism=Clytia hemisphaerica|type=CDS|length=3645bp|location=Sequence derived from alignment at scaffold_513:533272..545377+ (Clytia hemisphaerica)
atggcgggaAAAAAAGCAGTGAAATTCAGTTTTTTGATCGAAGACCCCAA
AATTTGGAAACAATACAAAGAATCGTACGCTGTTGTCTTCCAAAAATTCT
GTCTCAACCCGAAAAAGAGGAACTTGAAAGGTTTGGACGAGTGgTTTCAA
AATGAGTTTGGCAATGAAATACATGAAAGAAATCCTCATTCTTTGGTTAA
AGAAGATTTGAAGAAATTGATGGAATGGAAGTTAACAAGGGGGAAGTTTC
GACCAAGACTAACGCAGATGATTGCTGAAAACAAGGAGGAAGACATACGA
ACTTTTTCAGAAGAAGCCTTCAAGAATATTGACGACCCCAAGAAATGTAT
TGAAAGATTGTGCAAATTGAGAGCTGTCGGCCCTGCTACTGCATCAGCCA
TTTTGACAGCTTATAAACCAGAGAAATATGCTTTCATGGCAGACGAGGCC
GTACAAAGTGTTTTATCTGGCAAGATCGATTACACCCTCAAATATTACTT
GAAATTTCTGGACGAGGTTCGGTTGAAAGCAAAACAATTGTCAGCGACAG
ATGATACCACATGGACACCTCATCAGATCGAGATTTGTTTATGGACCGCT
GCCATGGCAACTAAACTAGACGTCAATATCTCGAACGAAGTCAACGAAGA
GAAGACTGGTAGCAAACGTAAATCAACCGACCAATTGGAAACgtctaaaa
aagcaaaaaaagtgaaatctaaatattgaatggcgggaAAAAAAGCAGTG
AAATTCAGTTTTTTGATCGAAGACCCCAAAATTTGGAAACAATACAAAGA
ATCGTACGCTGTTGTCTTCCAAAAATTCTGTCTCAACCCGAAAAAGAGGA
ACTTGAAAGGTTTGGACGAGTGgTTTCAAAATGAGTTTGGCAATGAAATA
CATGAAAGAAATCCTCATTCTTTGGTTAAAGAAGATTTGAAGAAATTGAT
GGAATGGAAGTTAACAAGGGGGAAGTTTCGACCAAGACTAACGCAGATGA
TTGCTGAAAACAAGGAGGAAGACATACGAACTTTTTCAGAAGAAGCCTTC
AAGAATATTGACGACCCCAAGAAATGTATTGAAAGATTGTGCAAATTGAG
AGCTGTCGGCCCTGCTACTGCATCAGCCATTTTGACAGCTTATAAACCAG
AGAAATATGCTTTCATGGCAGACGAGGCCGTACAAAGTGTTTTATCTGGC
AAGATCGATTACACCCTCAAATATTACTTGAAATTTCTGGACGAGGTTCG
GTTGAAAGCAAAACAATTGTCAGCGACAGATGATACCACATGGACACCTC
ATCAGATCGAGATTTGTTTATGGACCGCTGCCATGGCAACTAAACTAGAC
GTCAATATCTCGAACGAAGTCAACGAAGAGAAGACTGGTAGCAAACGTAA
ATCAACCGACCAATTGGAAACgtctaaaaaagcaaaaaaagtgaaatcta
aatattgaatggcgggaAAAAAAGCAGTGAAATTCAGTTTTTTGATCGAA
GACCCCAAAATTTGGAAACAATACAAAGAATCGTACGCTGTTGTCTTCCA
AAAATTCTGTCTCAACCCGAAAAAGAGGAACTTGAAAGGTTTGGACGAGT
GgTTTCAAAATGAGTTTGGCAATGAAATACATGAAAGAAATCCTCATTCT
TTGGTTAAAGAAGATTTGAAGAAATTGATGGAATGGAAGTTAACAAGGGG
GAAGTTTCGACCAAGACTAACGCAGATGATTGCTGAAAACAAGGAGGAAG
ACATACGAACTTTTTCAGAAGAAGCCTTCAAGAATATTGACGACCCCAAG
AAATGTATTGAAAGATTGTGCAAATTGAGAGCTGTCGGCCCTGCTACTGC
ATCAGCCATTTTGACAGCTTATAAACCAGAGAAATATGCTTTCATGGCAG
ACGAGGCCGTACAAAGTGTTTTATCTGGCAAGATCGATTACACCCTCAAA
TATTACTTGAAATTTCTGGACGAGGTTCGGTTGAAAGCAAAACAATTGTC
AGCGACAGATGATACCACATGGACACCTCATCAGATCGAGATTTGTTTAT
GGACCGCTGCCATGGCAACTAAACTAGACGTCAATATCTCGAACGAAGTC
AACGAAGAGAAGACTGGTAGCAAACGTAAATCAACCGACCAATTGGAAAC
gtctaaaaaagcaaaaaaagtgaaatctaaatattgaatggcgggaAAAA
AAGCAGTGAAATTCAGTTTTTTGATCGAAGACCCCAAAATTTGGAAACAA
TACAAAGAATCGTACGCTGTTGTCTTCCAAAAATTCTGTCTCAACCCGAA
AAAGAGGAACTTGAAAGGTTTGGACGAGTGgTTTCAAAATGAGTTTGGCA
ATGAAATACATGAAAGAAATCCTCATTCTTTGGTTAAAGAAGATTTGAAG
AAATTGATGGAATGGAAGTTAACAAGGGGGAAGTTTCGACCAAGACTAAC
GCAGATGATTGCTGAAAACAAGGAGGAAGACATACGAACTTTTTCAGAAG
AAGCCTTCAAGAATATTGACGACCCCAAGAAATGTATTGAAAGATTGTGC
AAATTGAGAGCTGTCGGCCCTGCTACTGCATCAGCCATTTTGACAGCTTA
TAAACCAGAGAAATATGCTTTCATGGCAGACGAGGCCGTACAAAGTGTTT
TATCTGGCAAGATCGATTACACCCTCAAATATTACTTGAAATTTCTGGAC
GAGGTTCGGTTGAAAGCAAAACAATTGTCAGCGACAGATGATACCACATG
GACACCTCATCAGATCGAGATTTGTTTATGGACCGCTGCCATGGCAACTA
AACTAGACGTCAATATCTCGAACGAAGTCAACGAAGAGAAGACTGGTAGC
AAACGTAAATCAACCGACCAATTGGAAACgtctaaaaaagcaaaaaaagt
gaaatctaaatattgaatggcgggaAAAAAAGCAGTGAAATTCAGTTTTT
TGATCGAAGACCCCAAAATTTGGAAACAATACAAAGAATCGTACGCTGTT
GTCTTCCAAAAATTCTGTCTCAACCCGAAAAAGAGGAACTTGAAAGGTTT
GGACGAGTGgTTTCAAAATGAGTTTGGCAATGAAATACATGAAAGAAATC
CTCATTCTTTGGTTAAAGAAGATTTGAAGAAATTGATGGAATGGAAGTTA
ACAAGGGGGAAGTTTCGACCAAGACTAACGCAGATGATTGCTGAAAACAA
GGAGGAAGACATACGAACTTTTTCAGAAGAAGCCTTCAAGAATATTGACG
ACCCCAAGAAATGTATTGAAAGATTGTGCAAATTGAGAGCTGTCGGCCCT
GCTACTGCATCAGCCATTTTGACAGCTTATAAACCAGAGAAATATGCTTT
CATGGCAGACGAGGCCGTACAAAGTGTTTTATCTGGCAAGATCGATTACA
CCCTCAAATATTACTTGAAATTTCTGGACGAGGTTCGGTTGAAAGCAAAA
CAATTGTCAGCGACAGATGATACCACATGGACACCTCATCAGATCGAGAT
TTGTTTATGGACCGCTGCCATGGCAACTAAACTAGACGTCAATATCTCGA
ACGAAGTCAACGAAGAGAAGACTGGTAGCAAACGTAAATCAACCGACCAA
TTGGAAACgtctaaaaaagcaaaaaaagtgaaatctaaatattga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043635XLOC_043635Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070080-exon-scaffold_513-1491911889:533272..533792TCONS_00070080-exon-scaffold_513-1491911889:533272..533792Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1510915933:533272..533792TCONS_00070080-exon-scaffold_513-1510915933:533272..533792Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1575043694:533272..533792TCONS_00070080-exon-scaffold_513-1575043694:533272..533792Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1491911889:540873..540966TCONS_00070080-exon-scaffold_513-1491911889:540873..540966Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1510915933:540873..540966TCONS_00070080-exon-scaffold_513-1510915933:540873..540966Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1575043694:540873..540966TCONS_00070080-exon-scaffold_513-1575043694:540873..540966Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1491911889:542105..542264TCONS_00070080-exon-scaffold_513-1491911889:542105..542264Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1510915933:542105..542264TCONS_00070080-exon-scaffold_513-1510915933:542105..542264Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1575043694:542105..542264TCONS_00070080-exon-scaffold_513-1575043694:542105..542264Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1491911889:543593..543745TCONS_00070080-exon-scaffold_513-1491911889:543593..543745Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1510915933:543593..543745TCONS_00070080-exon-scaffold_513-1510915933:543593..543745Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1575043694:543593..543745TCONS_00070080-exon-scaffold_513-1575043694:543593..543745Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1491911889:544444..545377TCONS_00070080-exon-scaffold_513-1491911889:544444..545377Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1510915933:544444..545377TCONS_00070080-exon-scaffold_513-1510915933:544444..545377Clytia hemisphaericaexon
TCONS_00070080-exon-scaffold_513-1575043694:544444..545377TCONS_00070080-exon-scaffold_513-1575043694:544444..545377Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070080-proteinTCONS_00070080-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:533272..545377 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.309	30.6013	34.5446	33.1694	8.80866	6.25072	9.47328	9.4493	9.25324	7.52603	7.46128	6.74741	4.17517	3.84815	6.89035	7.28109	13.2242	9.83144	4.18883	4.23219	8.83656	8.22332	14.8807	13.2333	10.5121	9.24594	4.32134	2.82162	5.93046	7.09069
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070080 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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