TCONS_00070166 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070166
Unique NameTCONS_00070166
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2931

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070166 ID=TCONS_00070166|Name=TCONS_00070166|organism=Clytia hemisphaerica|type=transcript|length=2931bp
aggaccatttggtaacgtgatcaaaaactgagcaaatggatttttatctt
ttgatattgacaaaggaaaaagctacCAGAAAGTTagaacaataagcttc
cagaccagggttttttatatgGACTATGGTGTAAGAGAATATTCTGGGTT
TTTTTATTCGCATGATTTGAAGGACTTCGAAGATAAAGATAACAATCCAA
GACAGACGAAACTTAAACAAAGGCATATCCCTAAAGTTTTTATCAACAAT
CTCGAACTCTACTTTCCGCCTGAGCAATAACAGTTAAATTTGATTTCTAA
AttcaaatcaacaaaaaaatggaacttttttgtttcaaaatgatTCTATT
GCCGTGTATTCTGCTGACTGGTTTTTTCTTCGGTGACATCAAAACGAACA
CTATAGAAGTGAACCGAAAAAATGGTTTATCCTTTGGAGATAATTATGTT
CCACCAGGTGGTATTGCAGAATGTTCGAGATACGGTGGTGTTGAGTTTTT
TTCGACTTCTTGCCAATGCAAAAATGCTCAAGGGATCTTGGGAACGTTCA
CAGATCAATGTGACTATGACTTGAAAGCTAGCTCAGgGTGCGGGTGGCAG
ATTCATCAAAGCAATTCACCATTTTACATGGATAGTGCGACTGACATTCT
GAATCAAGTTTTTATTGGCACTGATAAAACAACATTCGTAACAAATTGCA
AGGATATCGCATACTTAGGAGCTAAGATATTGGAAAATGGGGAATGGAAT
TCTTTTGCAGCTGATCATTTTGATACGGTGAAAATCGGTAATCGATACCA
ACTGAAGTGGGTAAATGGCCAGCAGCCAAATACTCAAACCTGGACTGCAA
ATTATGTTGGACAATTGTTTAAGATCAATCTAGGATGTGTACCATTGGAA
GGAGGTCAACCTCAACCGAGCTGTTTATTGgttaaaataaaaggaaaaag
agAATATACTATTGGAGATCTACCGACCACAACACCCATAATACCCACCA
CCACAACACCACAAAACACCACACCAGGATTAACAGATCAACCAACCAGT
CCAACGACAACTACACCAAAGGATGGAACGACCCCATTTATCGACCCCCC
GATTACCACAACAACGATAACCGGTgaagaagatgatgatgatCCGGCTG
GCGTTGTTATTGGTGTTCTCTTTGGAATAATCTTTTTCATTATATTGGTT
TTGTTAATCATATGCTGCTTGCACAAAAACGAGAAAATTGATGCAAGTAT
AATGGTCAATAAAATACCTGTTAAAAAAGCTCGCTTATATTTTCAAGATC
ATGAAACGAACAACAATACGAAATGGTTCGGAAAGGGAGTTGAAAGGCAG
CCTACAGCTCAACCTAATCATTACACCAATCCAGCCGTCACTTTGAATAG
AGACACCGTGGATGCTCCCGGTAATCCGCCGAGGAAGTTGAGCTTTGTAC
AAAATgcgaaaaataagatttttgggAAGAAAACACAGGATACAAGCGTT
GTTATCGAGAATGACAATACTTATGAGGAAATCgaacaatttcaaaaaga
cAGACCATCATATGTAGATATTACAGAACCTCCTCGAACACCCACAAATC
CATCATCACCCGGAAATGAATTGACAGTACCAGGGCTTGGAGGTCTGAGT
ATTGAAGAAGACATTTACGCAACGCCAGATAAAAGCCCTGCTCTTCCCTT
AAAGGGTGATACACTCTCATTAGCGAATGGCCATTATAAAATTCCAACAG
GGAGATATGACAAAGCCTCCTTGAAAAAGTCGAACAGCAATGCGTCATCT
TTGGACGGATGGAGTGAAGACGAGTTTGATGACCACGAGGAAGATCTTGA
agtagaagaagaaaagaaagatcGATATCTCCAAGCTGAAGGCGAAAATG
ATAGCTATTTAGGTGATGAAGATCTGGAAGTATCTAGCCAAGAACCCATA
GAGGACTGCAAACAACCAACCAACATTCCACCTCCAAAGAAACCGTCTAC
TGCCTCCAACGATTACAGAGAACTTGAGTTACCTCCTGTTCCTCCACAGG
CCCAAGAGTCAATCCCTGGTAGTAAGCGACCATCGATAGGTGGGCTACCT
CCCATCCCAGATCAAGCTCCTTCCCCACCTCAAGGGACCAATAGACCTCC
AATACCAGGAAACCGTCCAAATATACCAGCAGGCAGACAACGACCTTCCT
TAGGTAGCTTACCACGCCAACAAACGCTACCAGATGGCACAAATACAAGA
CAACCCTCGGTACCAGATTACAAAGATAATGAACTACCATCACCTCCAAC
AAGCCAGAACCAACAGCCTCGTTCTCGAAAAGCTTCTCTACCAGCCTTCC
TCTCTAAAACCAAAAGCAACGAGCCACGCTCCAGAAAGCAATCCTTACCA
CCTCCAGCTATAAGCAACCCAGTCAGGAAACCATCATTCCAGGATTACAA
GAATAACATTGTTCCGATTCCTGAACCACCAACAGAGGAGACAAGATATC
CTGGCCAAGACATCTATATAGCAGATAGTGATATTAATAGAAGTTTGAAA
CAGagAAAACCAGGACTGCCTGTGGTATCAACGACAGCAACTCCGAATAA
GGAAGAATCCCCGAAAGAAGACACTAATGGCGACAAAGATGATGATGtat
ttgaagatgaaaatgatgacAGATATCAAGAATTAGGTAATGATGGGAAC
AACCAAGATATATATGTGGATCTCAAAGAAGCCGGACAAGAATGATTATA
TAATATCAATCTTACATAATCATTTcataacattatatataaaatttttt
gatattcaataagtaaaactttaaatattattaaaaatatTGGGTAAAAG
TGATAAGAAAAGACTAATCTAAGCCGTTTCTGCAATTTTGTTGGTATCTG
AACCCTTTCAAAAAAGAACATTATTTTCAAT
Run BLAST on NCBI

protein sequence of TCONS_00070166-protein

>TCONS_00070166-protein ID=TCONS_00070166-protein|Name=TCONS_00070166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=808bp
MELFCFKMILLPCILLTGFFFGDIKTNTIEVNRKNGLSFGDNYVPPGGIA
ECSRYGGVEFFSTSCQCKNAQGILGTFTDQCDYDLKASSGCGWQIHQSNS
PFYMDSATDILNQVFIGTDKTTFVTNCKDIAYLGAKILENGEWNSFAADH
FDTVKIGNRYQLKWVNGQQPNTQTWTANYVGQLFKINLGCVPLEGGQPQP
SCLLVKIKGKREYTIGDLPTTTPIIPTTTTPQNTTPGLTDQPTSPTTTTP
KDGTTPFIDPPITTTTITGEEDDDDPAGVVIGVLFGIIFFIILVLLIICC
LHKNEKIDASIMVNKIPVKKARLYFQDHETNNNTKWFGKGVERQPTAQPN
HYTNPAVTLNRDTVDAPGNPPRKLSFVQNAKNKIFGKKTQDTSVVIENDN
TYEEIEQFQKDRPSYVDITEPPRTPTNPSSPGNELTVPGLGGLSIEEDIY
ATPDKSPALPLKGDTLSLANGHYKIPTGRYDKASLKKSNSNASSLDGWSE
DEFDDHEEDLEVEEEKKDRYLQAEGENDSYLGDEDLEVSSQEPIEDCKQP
TNIPPPKKPSTASNDYRELELPPVPPQAQESIPGSKRPSIGGLPPIPDQA
PSPPQGTNRPPIPGNRPNIPAGRQRPSLGSLPRQQTLPDGTNTRQPSVPD
YKDNELPSPPTSQNQQPRSRKASLPAFLSKTKSNEPRSRKQSLPPPAISN
PVRKPSFQDYKNNIVPIPEPPTEETRYPGQDIYIADSDINRSLKQRKPGL
PVVSTTATPNKEESPKEDTNGDKDDDVFEDENDDRYQELGNDGNNQDIYV
DLKEAGQE
Run BLAST on NCBI

transcript from alignment at scaffold_514:146172..154796+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070166 ID=TCONS_00070166|Name=TCONS_00070166|organism=Clytia hemisphaerica|type=transcript|length=8625bp|location=Sequence derived from alignment at scaffold_514:146172..154796+ (Clytia hemisphaerica)
aggaccatttggtaacgtgatcaaaaactgagcaaatggatttttatctt
ttgatattgacaaaggaaaaagctacCAGAAAGTTagaacaataagcttc
cagaccagggttttttatatgGACTATGGTGTAAGAGAATATTCTGGGTT
TTTTTATTCGCATGATTTGAAGGACTTCGAAGATAAAGATAACAATCCAA
GACAGACGAAACTTAAACAAAGGCATATCCCTAAAGTTTTTATCAACAAT
CTCGAACTCTACTTTCCGCCTGAGCAATAACAGTTAAATTTGATTTCTAA
AttcaaatcaacaaaaaaatggaacttttttgtttcaaaatgatTCTATT
GCCGTGTATTCTGCTGACTGGTTTTTTCTTCGGTGACATCAAAACGAACA
CTATAGAAGTGAACCGAAAAAATGGTTTATCCTTTGGAGATAATTATGTT
CCACCAGGTGGTATTGCAGAATGTTCGAGATACGGTGGTGTTGAGTTTTT
TTCGACTTCTTGCCAATGCAAAAATGCTCAAGGGATCTTGGGAACGTTCA
CAGATCAATGTGACTATGACTTGAAAGCTAGCTCAGGTATGTATTATTAG
TTACACGGACTTCTTGAGGTAGGATACAGTATATCGAGTTAttaaaaacc
gtattggtggtGAGGCTTGCCAAGGTTAGTGGAATTTTCATGTTCGTTGA
ATCTTCAACGGACTGTGTGATCCTTTTCTCGTCCTATTTCAATTAAAGGT
TaacaaaacttaaatttttattgtttttaaggGTGCGGGTGGCAGATTCA
TCAAAGCAATTCACCATTTTACATGGATAGTGCGACTGACATTCTGAATC
AAGTTTTTATTGGCACTGATAAAACAACATTCGTAACAAATTGCAAGGAT
ATCGCATACTTAGGAGCTAAGATATTGGAAAATGGGGAATGGAATTCTTT
TGCAGCTGATCATTTTGATACGGTGAAAATCGGTAATCGATACCAACTGA
AGGTAAGAGCAGACAGTCACGAATACATCAATTTGTATTAaaggttaaag
gttttatttttacataagtgaatccgtttcatatcagacacatatttcat
atcaggacagtgtctgtctattgttatattatgctgatataagcaaaata
atgtttttcttttcttctttttgaccgTTCTTGCTCCACAATCGTGTCAA
TCTAATGTGAAAAAGCGTGTGAAGTAAAATTGACGAGtaggcaaacgata
tcacttttatttaaaatcaaaacctttAGCGCACATTTATTCGACGTCCT
ATATTcaatacgctccattattcgataatattgagaCTTATTGTCAACAG
GAAAATCTCATAGACGACGCTCTTCTATATTCCACATGCTTCCTTCTCCG
ATGAAAATCAAATCccctttgaaaattgaataagacAGCTTGAAATGTAT
CACCCTGATTGTgactcaaatatcttaaacaATAGGAAAAGTATACTAAT
ATCGATTTTCTTTCTGAGCGTTTAACCCTTATAGGATACGGATAATTTAT
GCCCAAAAAAGTGTTCAACTTTTAATCGAGTGACTGTAACCATTGATCTC
AAAGCGCCAGAGGGGCTAAACGCCTGGATGTGAAATGAAGTCGCTCATTT
TCCATTCAGAACAGTGACCCGTGTGTTTTCCAAAGATTTCTTTAGTGCGG
GGTAAACTTAACGCTTCACTTTCTCTTGCTTGAGAaaagttgaagattcc
tctctagtcCCTTCGGGGCTTCAAGCTCAATGACCATAACTCAATACATT
AACAGTATCAGTTGAAAGTGGGTTAGAAAGAAAGTCAGCGTACTAAAATC
ACCTTAAAGAACACAATTGAGCCTGATCATATAATGTTCGTAGGGAAAAT
ACAACTTGTTCTTAGAATAATGATTTTCATCCATTCTATTAAAGTGGGTA
AATGGCCAGCAGCCAAATACTCAAACCTGGACTGCAAATTATGTTGGACA
ATTGTTTAAGATCAATCTAGGATGTGTACCATTGGAAGGAGGTCAACCTC
AACCGAGCTGTTTATTGgttaaaataaaaggaaaaagagGTACTTATTTa
tatatacacccctgtgtcacagaagCGCTGAgagcccagccccactggaa
aatttggcaaaagtttcatccccggtgggaaaataccctggaatttcaac
cccactgggaattttgatttcatccccatggagatttcaataaaaaattt
taattccaCTGAGGAAAAATTTCGACCGAGgctctgagacaggggtgtat
atatAATATATCAGTCAAATTTAGGGGCAGCGGTACCAAATAGTAATTAC
TAACTTTGAATATAAAGACACTCTCCTCTTGGTAATTAAACCTGTGaaca
tattataataacattgtATTGCAAATTAAAGATTTGGTCATTAAATTAAT
TCAGCAAAATTGCATAATATCTTTGCATCACTACAATGGGTACGGGGGCA
GATTTAGCTTTTtacaattaaaattatttttcaaatatttcgaaCCGATG
TACtgtgaaattttgatttctagAATATACTATTGGAGATCTACCGACCA
CAACACCCATAATACCCACCACCACAACACCACAAAACACCACACCAGGA
TTAACAGATCAACCAACCAGTCCAACGACAACTACACCAAAGGATGGAAC
GACCCCATTTATCGACCCCCCGATTACCACAACAACGATAACCGTAAGTT
TTATCATATCTTTACCGTCATTAACAATGGATAAAGCTTTTAGAAGATCT
TCTTCAGGCAAAACTTGTCCAAACATTCTTGACTTTCAATCACGATTCTA
CTTTTTACAGGGTgaagaagatgatgatgatCCGGCTGGCGTTGTTATTG
GTGTTCTCTTTGGAATAATCTTTTTCATTATATTGGTTTTGTTAATCATA
TGCTGCTTGCACAAAAAGTAAGTTTGTTATTCGATACCGTACTAACCTAC
GACAATCCAAAAAGCTCCGTAAACAATCAAATTGATCTGATTGGTCTTAA
TCTCAAAATTATGGTGTAATTGAGCTAAATAAACCAATCAATGCTCAGAA
AAAGCGTTTGATTGTTTAGGGAACTTTTGGATTGCTATAGGTAAGTACGG
TACTTTTGAGTATACTCTCGGGGTGGGGGTATTTTTCGGAACGTCTGCCA
CTAacaatgaaatttttattgacACTAGAGAAAGATAAGATGTATGAAAA
AACCTTTAGGTATAAAAGAAGTACCGTTATCTATCGCAAATACTTAGTAT
CAAGTTTTACCTAAGCACCCTTGTATCGGAATCATTTTCACTGGCTTGAT
ATCCTCCGGATCTGAGAGAAAGAAGTGCCTTCCCGGGGAATTACAAAACA
GTGAGGAATTAGCACCGAAAGTGGAGCGATCTGAGGAACCAATAATAaca
ctgaattttaaaaatattttttggccaTATAGGGACCAATTTAGTAGATC
GTGCGCACATTTTACCAAAAGAGATCAGCTATTATTGCATTGTTACTCTT
CTTTATTCTTATAGCGAGAAAATTGATGCAAGTATAATGGTCAATAAAAT
ACCTGTTAAAAAAGCTCGCTTATATTTTCAAGATCATGAAACGAACAACA
ATACGAAATGGTTCGGAAAGGTAAGTTTTTGAGTTTCAGGTTTTTCCCAG
CTTGGTATGAAATAATGCGAAGGGCTCTTTAAAGTCAGATATGAATGAGC
ACCtctgtctcgcagccccggtggaaaCTTTTCCCCATAGCTGAGAATGA
AAGCttctatcaaaatcccaatgggatggaaattctattgtgTCCTTCTC
AAAGAATCCAAGGTGGGATGGCTGTTACATTGAGTTTGAAACATGGGCGa
aacatagatttataaagcccaaagaGCTAGATGTTGTGCTTTGACAGAAA
AGTGTGctgaggttaggtaggaaatcctacctaagtcacatgacattaca
ataaaatttcagcgctTCACCAAACAAGCAATATtgttttgcgatattca
ctttttttgcttggaaaagtttaaagcacgatatctagcccttcgggctt
tacagaaatctgtgagtgaaatcaaagtcaattttccaaaattggcTGAC
GGATAATAGTAGCAGAAAATGAAATCGAGAGGGCATGCCAATCACAATAT
GATTTATGAAAACAACTGTAGGAAAGTGACCCTTTTTCTCGACCTTGATT
CTCGAGTCAGTAGGGGGTAAAACTAAAATCTGAATAGCTATGGAGAATTT
CAATGTTACATTTAAATGGGTATAAGAGTTCAGTGTAGCTTTCCATTGAG
CAATTTAAGATTATTTTCTCACATGGGATGCACGATATGATTTTCCAGTG
TTTtatgatacaggggtgtattctGACTTATTTTGACTTCAGGGAGTTGA
AAGGCAGCCTACAGCTCAACCTAATCATTACACCAATCCAGCCGTCACTT
TGAATAGAGACACCGTGGATGCTCCCGGTAAGATTTGGTTAATTTGTTCC
CATATTGTTTCTCCATTAcatttcttagtgagttccccACCTAACTACGT
TAAAAAGGCCAGTATACGCTAACTCAGTAGTGTAGCCAAGAGgtgcgcaa
aatttgtgtaggaaagcagatttttatgagacAGTAAtcatctttttata
ttatgaatagataattcaaaaaaatctgctctcctacataAATTTTGCGC
ctctcttggctacgctactgctAACTATACCGGCTAAGTTCAATTTTGTT
ATCTCTTTATAACACCAAATTAGTACCTCCTTTGTTTATGGTCatactga
tttttctatttgacGATTTCTAGGTAATCCGCCGAGGAAGTTGAGCTTTG
TACAAAATgcgaaaaataagatttttgggAAGAAAACACAGGATACAAGC
GTTGTTATCGAGAATGACAATACTTATGAGGAAGTAAGTTCTTTAATAAG
ATGTGATACTCATGGGAGGCAAATCAAAGGCGAATTTCATTAAATACTAA
ATTCTTAGAAATCACATTGTCACATTGGAGTCAACTGTATTTCATCTTTC
CTTATTTACAGATCgaacaatttcaaaaagacAGACCATCATATGTAGAT
ATTACAGAACCTCCTCGAACACCCACAAATCCATCATCACCCGGAAATGA
ATTGACAGTACCAGGGCTTGGAGGTCTGAGTATTGAAGAAGACATTTACG
CAACGCCAGATAAAAGCCCTGCTCTTCCCTTAAAGGTTGGTTTGAACGCT
TAATTTGTCTCTGTTTCATGTACACCAGTACTTGTTTCGATTATTACTTT
TGTTTTGGCAGTTTTGCCAAGTGACCGTGAGAAAGTttttgtcgatttag
agtagtctgctgaaaattgctaaaaaaataatcaCATCCAGgatcagcca
aattttaggtgttctaaNAAAagttaagaacgcatttaagaacattttag
gttgaaaattgctaaaaaaataatcaCATCCAGgatcagccaaattttag
gtgttctaatgaaagaaaaaacgtgtatcaggAAAATCAGTCAATTCTAT
CCAATGACTTCTCGTGGAAACAAGACAAGATGAGCTTTCCAATgaacaaa
gtttgaaaatcagcCTAAAATTCCTGATAACAAGAAGCTTGTTTTACCTA
GCTAGTCACCCCCGGTctacttttttctaaaatcttttCTTGTCCAGCAT
CGTATGGTAATAAATTAGCTTTGAGGCAATCTGCCTTGGTTCACCAAATA
AATAATTTCTTCTGGTCTTAATATTTGTTTGAGAAAATGGAGCACATTAG
AAAacagactttttttttaattcaacaaCCATTTTCTGTTTCAGGGTGAT
ACACTCTCATTAGCGAATGGCCATTATAAAATTCCAACAGGGAGATATGA
CGTAAGTGGGAGAATTCAAACGAGGTCAACTAATCTGACTAGGAATCGAG
ACTCAAAAATGTGATTAAAACTCACACCACTGCACATAGCtcttttttgt
ggtttgatgaGAATGTTTTATCCAGTGCCCAGGATCCAGTGATACCCCAG
CTGTCACTAAACGTCTAAAAAACGTCCAGCAAACATCcctaacgtccaaa
taacgttgtaagaacgttaaaacaacgttgagTGCCAGCTAGGACCCAGG
GAGGATTCGATTCAATAATGACCTTGCGCGCAGCCCAAAACTAGGCCTTT
GAAATCTGTCCCTCAcaatgcagagaaaattttagaaattttttgagaat
tttgatgagaaatcgacccttacggtgcattttctttaaagttttgagCA
TTTAAGACAAAATatggtcaaatttttgcatttttttactttttggctta
aagtctcgctggaaagactcactttgattttttttgcttgaccatgaaac
ccaatccaattcctacgagttagaccaaaaatgacgatttctaactcaaa
ctgggcattacagaaGGGCTTTGTAGCCCATTTCTAGTATACTCGTCATT
GGTACTTAAAGCCGATCTGACATTATGTTTTCCAaggtctgaatcgctgc
ttcaaaataaaaagcaagTCATAAGTCACAATAGACTCACGAAGAgatta
acaaaattttcaaattttgtatcCAATCTTTTTCCTTAGAAAGCCTCCTT
GAAAAAGTCGAACAGCAATGCGTCATCTTTGGACGGATGGAGTGAAGACG
AGTTTGATGACCACGAGGAAGATCTTGAagtagaagaagaaaagaaagat
cGATATCTCCAAGCTGAAGGCGAAAATGATAGCTATTTAGGTTAGTATTT
ATATGTTAAAAATCAATATGGGTAGAAGATGGGTGAAAAAGTGAGTTGTG
AATGCGCTTCTAGAGCATCCGAAATAAAGACTTTGGAGCATTCTCTTATT
CTTTCTTCGTCAAAAATTCTTGCAGGCGCAATACTAGTATGATATAACTT
TTCAGTTAGATTTTCTACGCCTGCATAacttttttaaagtttgaaatata
tCTAGTAAGGTTAAAAGCAAGAATATATGATTTAAATTTCGAatgtattt
attgaatattgatgataataatttcttttatttagGTGATGAAGATCTGG
AAGTATCTAGCCAAGAACCCATAGAGGACTGCAAACAACCAACCAACATT
CCACCTCCAAAGAAACCGTCTACTGCCTCCAACGATTACAGAGAACTTGA
GTTACCTCCTGTTCCTCCACAGGCCCAAGAGTCAATCCCTGGTAGTAAGC
GACCATCGATAGGTGGGCTACCTCCCATCCCAGATCAAGCTCCTTCCCCA
CCTCAAGGGACCAATAGACCTCCAATACCAGGAAACCGTCCAAATATACC
AGCAGGCAGACAACGACCTTCCTTAGGTAGCTTACCACGCCAACAAACGC
TACCAGATGGCACAAATACAAGACAACCCTCGGTACCAGATTACAAAGAT
AATGAACTACCATCACCTCCAACAAGCCAGAACCAACAGCCTCGTTCTCG
AAAAGCTTCTCTACCAGCCTTCCTCTCTAAAACCAAAAGCAACGAGCCAC
GCTCCAGAAAGCAATCCTTACCACCTCCAGCTATAAGCAACCCAGTCAGG
AAACCATCATTCCAGGATTACAAGAATAACATTGTTCCGATTCCTGAACC
ACCAACAGAGGAGACAAGATATCCTGGCCAAGACATCTATATAGCAGATA
GTGATATTAATAGAAGTTTGAAACAGGTGTGTATCGGTCGTTAAAGATTT
TACTAAGAAATGCCTTGACCGATCAGAGTAACAAATGAAACATAGTAACA
TATAGTAAAAAGCATATCGGTTAATTCCACCAGTTcgattttcaattatt
ttgagagtttttaTCCTATTAGTCTGGTGCTGAAGCCGGGTAAAAAGAAC
AGTTATTTTATAAATCTTGAATATTTATGTTTGAGATAAACACTGGAAAA
GACAGATAAAACCCCTTTAAAGGTCCCAGGACGGCCATTGCACGACTTTC
TAATGCCCTTCACATCTAAGAGAAAAGGGGTGAAGGGCAGATGTCACTTT
TGTGTCACCGATAACATATTGGCCTTGGTTATTTCTTTCTCGTAGAGAAA
ACTATCAACAAATAACACTCAATATACTAGAATACTTATTGGTTGCTTGT
TGGGCAACCTACAACAGGtaatttcctttttatttttgttcttatagagA
AAACCAGGACTGCCTGTGGTATCAACGACAGCAACTCCGAATAAGGAAGA
ATCCCCGAAAGAAGACACTAATGGCGACAAAGATGATGATGtatttgaag
atgaaaatgatgacAGATATCAAGAATTAGGTAATGATGGGAACAACCAA
GATATATATGTGGATCTCAAAGAAGCCGGACAAGAATGATTATATAATAT
CAATCTTACATAATCATTTcataacattatatataaaattttttgatatt
caataagtaaaactttaaatattattaaaaatatTGGGTAAAAGTGATAA
GAAAAGACTAATCTAAGCCGTTTCTGCAATTTTGTTGGTATCTGAACCCT
TTCAAAAAAGAACATTATTTTCAAT

Coding sequence (CDS) from alignment at scaffold_514:146172..154796+

>TCONS_00070166 ID=TCONS_00070166|Name=TCONS_00070166|organism=Clytia hemisphaerica|type=CDS|length=2427bp|location=Sequence derived from alignment at scaffold_514:146172..154796+ (Clytia hemisphaerica)
atggaacttttttgtttcaaaatgatTCTATTGCCGTGTATTCTGCTGAC
TGGTTTTTTCTTCGGTGACATCAAAACGAACACTATAGAAGTGAACCGAA
AAAATGGTTTATCCTTTGGAGATAATTATGTTCCACCAGGTGGTATTGCA
GAATGTTCGAGATACGGTGGTGTTGAGTTTTTTTCGACTTCTTGCCAATG
CAAAAATGCTCAAGGGATCTTGGGAACGTTCACAGATCAATGTGACTATG
ACTTGAAAGCTAGCTCAGgGTGCGGGTGGCAGATTCATCAAAGCAATTCA
CCATTTTACATGGATAGTGCGACTGACATTCTGAATCAAGTTTTTATTGG
CACTGATAAAACAACATTCGTAACAAATTGCAAGGATATCGCATACTTAG
GAGCTAAGATATTGGAAAATGGGGAATGGAATTCTTTTGCAGCTGATCAT
TTTGATACGGTGAAAATCGGTAATCGATACCAACTGAAGTGGGTAAATGG
CCAGCAGCCAAATACTCAAACCTGGACTGCAAATTATGTTGGACAATTGT
TTAAGATCAATCTAGGATGTGTACCATTGGAAGGAGGTCAACCTCAACCG
AGCTGTTTATTGgttaaaataaaaggaaaaagagAATATACTATTGGAGA
TCTACCGACCACAACACCCATAATACCCACCACCACAACACCACAAAACA
CCACACCAGGATTAACAGATCAACCAACCAGTCCAACGACAACTACACCA
AAGGATGGAACGACCCCATTTATCGACCCCCCGATTACCACAACAACGAT
AACCGGTgaagaagatgatgatgatCCGGCTGGCGTTGTTATTGGTGTTC
TCTTTGGAATAATCTTTTTCATTATATTGGTTTTGTTAATCATATGCTGC
TTGCACAAAAACGAGAAAATTGATGCAAGTATAATGGTCAATAAAATACC
TGTTAAAAAAGCTCGCTTATATTTTCAAGATCATGAAACGAACAACAATA
CGAAATGGTTCGGAAAGGGAGTTGAAAGGCAGCCTACAGCTCAACCTAAT
CATTACACCAATCCAGCCGTCACTTTGAATAGAGACACCGTGGATGCTCC
CGGTAATCCGCCGAGGAAGTTGAGCTTTGTACAAAATgcgaaaaataaga
tttttgggAAGAAAACACAGGATACAAGCGTTGTTATCGAGAATGACAAT
ACTTATGAGGAAATCgaacaatttcaaaaagacAGACCATCATATGTAGA
TATTACAGAACCTCCTCGAACACCCACAAATCCATCATCACCCGGAAATG
AATTGACAGTACCAGGGCTTGGAGGTCTGAGTATTGAAGAAGACATTTAC
GCAACGCCAGATAAAAGCCCTGCTCTTCCCTTAAAGGGTGATACACTCTC
ATTAGCGAATGGCCATTATAAAATTCCAACAGGGAGATATGACAAAGCCT
CCTTGAAAAAGTCGAACAGCAATGCGTCATCTTTGGACGGATGGAGTGAA
GACGAGTTTGATGACCACGAGGAAGATCTTGAagtagaagaagaaaagaa
agatcGATATCTCCAAGCTGAAGGCGAAAATGATAGCTATTTAGGTGATG
AAGATCTGGAAGTATCTAGCCAAGAACCCATAGAGGACTGCAAACAACCA
ACCAACATTCCACCTCCAAAGAAACCGTCTACTGCCTCCAACGATTACAG
AGAACTTGAGTTACCTCCTGTTCCTCCACAGGCCCAAGAGTCAATCCCTG
GTAGTAAGCGACCATCGATAGGTGGGCTACCTCCCATCCCAGATCAAGCT
CCTTCCCCACCTCAAGGGACCAATAGACCTCCAATACCAGGAAACCGTCC
AAATATACCAGCAGGCAGACAACGACCTTCCTTAGGTAGCTTACCACGCC
AACAAACGCTACCAGATGGCACAAATACAAGACAACCCTCGGTACCAGAT
TACAAAGATAATGAACTACCATCACCTCCAACAAGCCAGAACCAACAGCC
TCGTTCTCGAAAAGCTTCTCTACCAGCCTTCCTCTCTAAAACCAAAAGCA
ACGAGCCACGCTCCAGAAAGCAATCCTTACCACCTCCAGCTATAAGCAAC
CCAGTCAGGAAACCATCATTCCAGGATTACAAGAATAACATTGTTCCGAT
TCCTGAACCACCAACAGAGGAGACAAGATATCCTGGCCAAGACATCTATA
TAGCAGATAGTGATATTAATAGAAGTTTGAAACAGagAAAACCAGGACTG
CCTGTGGTATCAACGACAGCAACTCCGAATAAGGAAGAATCCCCGAAAGA
AGACACTAATGGCGACAAAGATGATGATGtatttgaagatgaaaatgatg
acAGATATCAAGAATTAGGTAATGATGGGAACAACCAAGATATATATGTG
GATCTCAAAGAAGCCGGACAAGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043697XLOC_043697Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070166-exon-scaffold_514-1491911889:146172..146757TCONS_00070166-exon-scaffold_514-1491911889:146172..146757Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:146172..146757TCONS_00070166-exon-scaffold_514-1510915933:146172..146757Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:146172..146757TCONS_00070166-exon-scaffold_514-1575043694:146172..146757Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:146953..147173TCONS_00070166-exon-scaffold_514-1491911889:146953..147173Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:146953..147173TCONS_00070166-exon-scaffold_514-1510915933:146953..147173Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:146953..147173TCONS_00070166-exon-scaffold_514-1575043694:146953..147173Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:148116..148260TCONS_00070166-exon-scaffold_514-1491911889:148116..148260Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:148116..148260TCONS_00070166-exon-scaffold_514-1510915933:148116..148260Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:148116..148260TCONS_00070166-exon-scaffold_514-1575043694:148116..148260Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:148745..148914TCONS_00070166-exon-scaffold_514-1491911889:148745..148914Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:148745..148914TCONS_00070166-exon-scaffold_514-1510915933:148745..148914Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:148745..148914TCONS_00070166-exon-scaffold_514-1575043694:148745..148914Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:149032..149138TCONS_00070166-exon-scaffold_514-1491911889:149032..149138Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:149032..149138TCONS_00070166-exon-scaffold_514-1510915933:149032..149138Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:149032..149138TCONS_00070166-exon-scaffold_514-1575043694:149032..149138Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:149736..149841TCONS_00070166-exon-scaffold_514-1491911889:149736..149841Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:149736..149841TCONS_00070166-exon-scaffold_514-1510915933:149736..149841Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:149736..149841TCONS_00070166-exon-scaffold_514-1575043694:149736..149841Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:150614..150698TCONS_00070166-exon-scaffold_514-1491911889:150614..150698Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:150614..150698TCONS_00070166-exon-scaffold_514-1510915933:150614..150698Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:150614..150698TCONS_00070166-exon-scaffold_514-1575043694:150614..150698Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:151045..151154TCONS_00070166-exon-scaffold_514-1491911889:151045..151154Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:151045..151154TCONS_00070166-exon-scaffold_514-1510915933:151045..151154Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:151045..151154TCONS_00070166-exon-scaffold_514-1575043694:151045..151154Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:151283..151456TCONS_00070166-exon-scaffold_514-1491911889:151283..151456Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:151283..151456TCONS_00070166-exon-scaffold_514-1510915933:151283..151456Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:151283..151456TCONS_00070166-exon-scaffold_514-1575043694:151283..151456Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:152066..152122TCONS_00070166-exon-scaffold_514-1491911889:152066..152122Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:152066..152122TCONS_00070166-exon-scaffold_514-1510915933:152066..152122Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:152066..152122TCONS_00070166-exon-scaffold_514-1575043694:152066..152122Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:152861..153011TCONS_00070166-exon-scaffold_514-1491911889:152861..153011Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:152861..153011TCONS_00070166-exon-scaffold_514-1510915933:152861..153011Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:152861..153011TCONS_00070166-exon-scaffold_514-1575043694:152861..153011Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:153307..153947TCONS_00070166-exon-scaffold_514-1491911889:153307..153947Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:153307..153947TCONS_00070166-exon-scaffold_514-1510915933:153307..153947Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:153307..153947TCONS_00070166-exon-scaffold_514-1575043694:153307..153947Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1491911889:154419..154796TCONS_00070166-exon-scaffold_514-1491911889:154419..154796Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1510915933:154419..154796TCONS_00070166-exon-scaffold_514-1510915933:154419..154796Clytia hemisphaericaexon
TCONS_00070166-exon-scaffold_514-1575043694:154419..154796TCONS_00070166-exon-scaffold_514-1575043694:154419..154796Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070166-proteinTCONS_00070166-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_514supercontigscaffold_514:146172..154796 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0127099	0.0147574	0	0.0878834	0.0277787	0.0670275	0.0156876	0.0219665	0.244882	0.0396147	0.0173607	26.279	19.7415	0.0148019	0.0476542	0.127197	0.0751688	53.9156	71.5487	0.297862	0.265312	0.0298884	0.0271729	0.097956	0.0374672	0	0.0190733	0.0433992	0.014739
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070166 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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