TCONS_00070530 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070530
Unique NameTCONS_00070530
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3033

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070530 ID=TCONS_00070530|Name=TCONS_00070530|organism=Clytia hemisphaerica|type=transcript|length=3033bp
GAAAGATTTAGATACAGAAAGGAGGAAATAAGTAACTATCAAAcgaacat
ttcaaaaaaatataacatggCAAGCATAGCCATAACGGCTGTTTTACTAC
AGCTTTTAATCATCCGGGTATGGTGTATACCGGACCTGATCAAAAAGTCT
CCGAATGGAGACTCGGAAGCACAATACGGTAAAAGTCTTTTCGATGATAG
GAAATATAACGATAATGATCCGACAAAGGAGTTTGTTACAGATCAACTAA
GTATATCAATTAAGAAAGCTGGTATCAATTGGaatggttttaaatttttt
ggccTTGATTTCAATCAACCGGATCAAATTGGAGGCGATGTCAAGATTCA
TTTTAATGGATTCCTTACATTTGGTTCTGAATCAACAAAAGAAGCCACAG
CTGGAAAATGTATCCGTGTTGGATTTGAATCGAATTTCTTGGCTCCTTAC
TGGATGCGCTATTTCAAAGGATCAGTACGTGTGTTTGAGCTCGGCAAAAC
CGGTCAAGCAAAGACAGATCGAGAAAATATCATAAAGGATCTCTTCAAAG
CAGGGATTCTGGCCAACCCTAGCAAAAAGGCCACAAGTGAAGCGAGAATC
ATTGTTTTGACTTGGCTCAAAATGAGATCTAGTGGAACATATGATCCTTC
CTTACAAAAATGGGGTAAAGGATTCAAGAACACATTTCAAATGTTTGTCA
TTCTCCACGCAGGAGAGACATACATCAAATACTATTACCGATCGTTGGAT
ACCAACAAGATTTTTGTCGGTGGGATAGTGCCTTGCTATGGAAGGattGG
TATTTCAAGATACAGGCAAAACGTAGATCCAAAATCTTGTAAACTGGAAA
GGAACTCTTTCGGAATTGACAACTTATCtggaaaattgaataaaattccG
CAAAAGATCGAATATTATTCAAATGAAGGGAACGATGGCGATATGGGAAG
TTGGAGTTTCCGTGTCAGCCCAAAGCAATGTAAGCAAAAGCTTGATGTTG
GCGAGTACTGTACAAAACGTGACAAAACGCATTTCAAATGTGATTATCGA
CAAAAGGCGATTGGTTGTTTAGAAGTGGAAGAGGGCGGTGGGCGTTGTGT
GTTAAAGAAGAGCCCGGGGAGAGGTAGACGGTCTCTCTCTTCAGCGCAAA
TACAAAAGAACGTTGACCGGTTTTGTGAGTTTCGTGACGATGGGGATTTC
GTGTTTCCGTTGAAATGCCGTATTTACATCAACTGTTTTGAAGGGAAAGC
ATCGTTTGCGTCGTGTGCTGACGGGGAGCGTTTTCATCCTGAACTCAGGA
AATGTGTAAAAGCTGCGGATGTTGATTGTGAAACACCTGGATTGAAAACA
CAAGAagTATTTCAAGTCAAGACCGAAATCAAACGTTCAAAGCTTCGAGA
AATAATCCCCATAGTGCACAAATTTTACTCCGTCACTCTCGATATTAAAC
CTAAAACACCTGCTCGTGGTGGGTGGAATAGTGTTTTCCACGCTACTATC
AAGTCAAGTTGGACATACTACGGTGATAGAACGCCCAGTATAGTTATGCA
CAAAGATACTACAAAGTTACAgttttgTGGACCTCTCAACTATCCAAATC
CAATTCTATGTCAAAGTCCTGCTCCACCAATACCTCTTAACAAATTTACC
AAGATTAAGATCCAACAAATTCCCAACGGAGATGATTCCAAATTCATTGT
TTACATCAATGGAAAAACTGTTTGGACAGCTACACCAAACTATCCAACCA
TGTTTTCGAACGTGAAAGTTTATGAAGGGGATCCATATTTCCCTGCTGCT
AACATTGAAACCAAGAATTATAAGTTTCAATCAGGGATCACTGCAGGTCA
CGTCCTTGAAACTGTCAAGAAACTGCAAAACATGTGGACACTCAAACTCG
CCATCATTCCCGTCAAAACACAAAACGGTGACACAAGCATTCTCCACGCT
ACACCTTACTTCGATAGCCGTACAGTGGGAGAACTAAAAATCGATTTCCT
TGATAAAACAACCAGGCTTCGTATCTGTGTACCGTCGCTCTCGACATCTT
ATACACCCTACTGCATCACATTCCCACGCTCCTTACCACTAAGCAAGTTG
GCAAAGATCCAGATTCGCCGTCGACCAGCAGTCTCTGGAACTGATTACAT
TATCCATTTGAACGGGGAACAGAAATACAAGTTTAACGATCCAACACCAA
ATAAAGTTGATGATGTAAATATGTATCTCTCTGATCCTTTCATGGCGCCC
GCTAATGCTGTTCTGGAAGCATACCAATTCAATAATGGCGTTCAGAAAGG
TCACGTCATAGATGAAAAATCCAGTCTCGGCCCAGCCTGGAAACTCAATC
TTAAGATCACCATAACCAACACACAGCATACGGGCTGGATCAACATTCTA
CACGCTGTCAACAATGGTGTCTCAAGTGATttattgttttatgttttcat
tCAACCGAGAACAACACGCCCATACATCTGTACCGCCCTCAAACAAGGTG
GCGCCAACCTATGTACATCCACGTCATCGCTATCCTTGAATAGACCAACT
TTGATTGAAATAGATCATTTTCAATCTTCTGGGAAATATTACTATCAGAT
GACTGTTGGTGGACAAGCAGTGTATTTGGATGCGAGCAAAAGGCGACCAA
AACCCATTCTGAATGCAAATCCAAGGACATTTGAAAATGTGGTTGTTTAT
GCGTCAAGCCCTTACTATAACGAACCTTCTGACAATGTAGAAATTAGTGG
ATATAGTTTAGTGCAAAACGTTGATCGgttttaatcggattaattttcgt
gaaccaaaaaaacaaaaaaagaaaagatttattttcgcgaattggCATTA
AGAAAAATTCGAATCAGTCGAAATAACGAAACTGGCCCCGAAAACGCCCA
AATGAGCACGAAAATAAGTGCGATTAAAGTAGAACATTTTAACCAATATT
CGAACCAGAGTTGTACTTTCTCTTTATATTTCTTATGTATATGTTTCTTA
TGTATCTTTTTGCATTATAGTACGATTGTGTAA
Run BLAST on NCBI

protein sequence of TCONS_00070530-protein

>TCONS_00070530-protein ID=TCONS_00070530-protein|Name=TCONS_00070530-protein|organism=Clytia hemisphaerica|type=polypeptide|length=927bp
ERFRYRKEEISNYQTNISKKYNMASIAITAVLLQLLIIRVWCIPDLIKKS
PNGDSEAQYGKSLFDDRKYNDNDPTKEFVTDQLSISIKKAGINWNGFKFF
GLDFNQPDQIGGDVKIHFNGFLTFGSESTKEATAGKCIRVGFESNFLAPY
WMRYFKGSVRVFELGKTGQAKTDRENIIKDLFKAGILANPSKKATSEARI
IVLTWLKMRSSGTYDPSLQKWGKGFKNTFQMFVILHAGETYIKYYYRSLD
TNKIFVGGIVPCYGRIGISRYRQNVDPKSCKLERNSFGIDNLSGKLNKIP
QKIEYYSNEGNDGDMGSWSFRVSPKQCKQKLDVGEYCTKRDKTHFKCDYR
QKAIGCLEVEEGGGRCVLKKSPGRGRRSLSSAQIQKNVDRFCEFRDDGDF
VFPLKCRIYINCFEGKASFASCADGERFHPELRKCVKAADVDCETPGLKT
QEVFQVKTEIKRSKLREIIPIVHKFYSVTLDIKPKTPARGGWNSVFHATI
KSSWTYYGDRTPSIVMHKDTTKLQFCGPLNYPNPILCQSPAPPIPLNKFT
KIKIQQIPNGDDSKFIVYINGKTVWTATPNYPTMFSNVKVYEGDPYFPAA
NIETKNYKFQSGITAGHVLETVKKLQNMWTLKLAIIPVKTQNGDTSILHA
TPYFDSRTVGELKIDFLDKTTRLRICVPSLSTSYTPYCITFPRSLPLSKL
AKIQIRRRPAVSGTDYIIHLNGEQKYKFNDPTPNKVDDVNMYLSDPFMAP
ANAVLEAYQFNNGVQKGHVIDEKSSLGPAWKLNLKITITNTQHTGWINIL
HAVNNGVSSDLLFYVFIQPRTTRPYICTALKQGGANLCTSTSSLSLNRPT
LIEIDHFQSSGKYYYQMTVGGQAVYLDASKRRPKPILNANPRTFENVVVY
ASSPYYNEPSDNVEISGYSLVQNVDRF
Run BLAST on NCBI

transcript from alignment at scaffold_56:556644..565993-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070530 ID=TCONS_00070530|Name=TCONS_00070530|organism=Clytia hemisphaerica|type=transcript|length=9350bp|location=Sequence derived from alignment at scaffold_56:556644..565993- (Clytia hemisphaerica)
GAAAGATTTAGATACAGAAAGGAGGAAATAAGTAACTATCAAACGAACAT
TTCAAAAAAATATAACATGGCAAGCATAGCCATAACGGCTGTTTTACTAC
AGCTTTTAATCATCCGGGTATGGTGTATACCGGACCTGATCAAAAAGTCT
CCGAATGGAGACTCGGAAGCACAATACGGTAAAAGTCTTTTCGATGATAG
GAAATATAACGATAATGATCCGACAAAGGAGTTTGTTACAGATCAACTAA
GTATATCAATTAAGAAAGCTGGTATCAATTGGAATGGTTTTAAATTTTTT
GGCCTTGATTTCAATCAACCGGATCAAATTGGAGGCGATGTCAAGGTAAA
AAGCATTCTTATCCATTTACGAAAACGCTTTTCTTGTTACTACCTTATTA
CACGAATATTACTAGGCAAGTATTCAACGGCCTTGAAATTAACACGCAAA
AAATTAACACGAATTTTACTTGCTTTTTCAAGGACACCACGGCTGGTTTT
AATTAAAGGGATTTTAATTAACACGAAATTTCTTAATTCGTGTTAATTAC
ATGTCTACTCATTTCCATGTCTACTTATTTCCATGTAATAGGGTAATTCC
ATGCGCTTCCCTACTAACGGTTTTACGTACTCTGAACTTTATTTTCAAAA
CGCTTTTTATCTTTCCCTCACGGTACTTATTCGTTCTTGTACCCATTTTA
AGCATTACTTTTAAGAGTCTCCTCCAGCTATTTTTCCATTGCATGAATTT
AGTCTCTTGTTGATAACTCGAGCGCATGAAATACAAATTTATTTGGATGG
GTAGGTGTTCTCTAGTCTCGAAAGTTAGGGGCAAATAAATGTGGCGACAA
CTGAGTTCAAGATTCGAGAATGGCTCTGCCGAATGAATGTACTGCAGTAA
ATCCATCTTAATTCTTTCTTTTGTATCTGATCTTAGATTCATTTTAATGG
ATTCCTTACATTTGGTTCTGAATCAACAAAAGAAGCCACAGCTGGAAAAT
GTATCCGTGTTGGATTTGAATCGAATTTCTTGGCTCCTTACTGGATGCGC
TATTTCAAAGGATCAGTACGTGTGTTTGAGCTCGGCAAAACCGGTCAAGC
AAAGACAGATCGAGAAAATATCATAAAGGATCTCTTCAAAGCAGGGATTC
TGGCCAACCCTAGCAAAAAGGCCACAAGTGAAGCGAGAATCATTGTTTTG
ACTTGGCTCAAAATGAGATCTAGTGGAACATATGATCCTTCCTTACAAAA
ATGGGGTGTAAGTTATTTATAAATGATAAGCTTATTCTGAGACTTTGGTT
AGGTTACAGTGTTAAAACTTCTTCCATCTTAGGCGGATTTCCGTCTCAGT
GAAGTATATAATATATCCGTCTCAAAATTAACATATTCCACCAATATTTT
AAGGATATGTCCTAATTTGCAGCAATATTTTAAGGATATGTCCTAATTTG
CAGCAATATTTTAAGGATATGTCCTAATTTGCAGCAAAATCCATTTTCCG
TCTCAGACCAAAAAACTTTGCTTTGACAACTGGAGTTAAGAATAGATTTA
GATTTTTAAGCCTCTCGCGATAAGACGTTAATAACCAAAAAATTCGTAAG
TATTTTCTTATAAGGAAATTGACACCGAAATGATCTTCCAACAACGAGGA
CCTAAAGCTGAGAAACTTGACACCAAAATGATTTTCTAACGAGGACCTTA
AGCTGCTATTGGACCGCATTGGTCTGATAGGTTATAGGTGTAGTCAATCT
TATATAAACGCTTTTATCTTCTTTCTTTAGAAAGGATTCAAGAACACATT
TCAAATGTTTGTCATTCTCCACGCAGGAGAGACATACATCAAATACTATT
ACCGATCGTTGGATACCAACAAGATTTTTGTCGGTGGGATAGTGCCTTGC
TATGGAAGGGTAAGTTTATTTGCCATCTACACGTTTTTTATATAAGAACA
TCCAAAATTTTTGAAGCCTTCGGATGTTCTTAACTTTTTGAGATTTAAGC
CTAAAAATGTTCTTAACATGTTCTTATTTTCACCATTTTGCAAGTATTTT
TGCCCATTTCCTAAAAATTGGGTGTTCTAAGGTCTGCAAAGCCTTAATAT
GCTATTAACTTTTTGGCCATCGAAGCATTTTCCTAAGAAATTGGCTGTCC
TCAAAGCCTTAAAATGTTCTAAACTTGTTCTTAATATTTTGGCCATCGAA
GCCTTATGCTCTTATATGGTTTGTTCTTATAAAAGAACGTGTATTCTTTA
AATGTTATACACACTATGAGAACAACGAGGCTCGAAATCTTCAAAAATAG
GAAAAGTACAAGAACAATTCTGAGCCTGGAATTACTGAATTTCAATCAAT
TTAGGATAGTCAAAGTAGTAAAAATTTAGAATTATGCTTAAAATACCCCA
ATCTCACCTTATAAATTTCGTCTCTGACAAAAGCCCTGCTTTGACAACTT
TAGAACCCTTTAGAAGCCCAGTGTCGATTTGCATTTAATTTTTCTTTTTT
CTGAGTTCCCCGGTGGCACAGCTCCTCAGACTAAATTTGTAAACTGTTTT
AAATAAATTTTTTAGATTGGTATTTCAAGATACAGGCAAAACGTAGATCC
AAAATCTTGTAAACTGGAAAGGAACTCTTTCGGAATTGACAACTTATCTG
GAAAATTGAATAAAATTCCGCAAAAGGTATTTTTCTTAAAGTGATTTTTA
CACGTTCTTTTTACGCATTAAAAAAGAACCCTTTATGTAATTTTGGGTCC
GGGATGGTGCCCGACCTAGGTAGGTAGGCTATGTAATTTTATCGGATCAT
TTGAAATCGTGGATATTTTCTAAACTTATCGACAAATTCTCGCCTTATAT
TCACTTCGCTTTATTTTATCGTACATTAGTGTCCAGAGCCCATTCGCTTC
AAGTGTGCAATAATCTTGTTCTTGCCTTCTTTTTCCCAACCCGAGGTTCA
ATTTTAACATATNTGTGCAATAATCTTGTTCTTGCCTTCTTTTTCCCAAC
CCATGGTTCAATTTTAACATATTATATAGGTACCGCAGTTTCGGAGGAAA
ATAATTCACTGTATTAAAAAAAAAAAAGAAATGAAATGAATCTTATCCTT
TAGGTACCTGAAGTCCCTAATTTCAGATATACAATCTTTTGTTCCTTAAT
AGATCGAATATTATTCAAATGAAGGGAACGATGGCGATATGGGAAGTTGG
AGTTTCCGTGTCAGCCCAAAGCAATGTGAGTAAATAATGTAGATGTCTTC
CAGTTTTGCTAAGATTGTGTAGTAAGTCTGCGACCGTAGTCGGAAGCGAC
CCGAAGGCTCCTCTTTTGATAGCTATCTACCCGAAGGTAGGGGAGGGCGG
CGCTCTTTCTCACTGGATTGCTCCACTTACCCTTGATCCTTCTCTTAATT
GCTGAGCATCAAGCAGAGATGCATTAAGTATCATTTTGATAATCTTTGGT
ATGACTCGGCTGGGGGTTGAACCCACAACCTTGCGAACCGTAGTNATATC
ATTTTGAGAATCTTTGGTATGACTTGGCTGGGGGTTGAACCCACAACCTT
GCGAACCGTAGTGCAGTGGTAGAGCATCCGGCTACGGACTTAGCGGGAAA
TGAATAATTGTAGAAAAGATTCGAATTTGAAGAAGGGATTTTAGAATAGT
TTTCTTTTGATACAAATCACGCAAATTGGCTAAACCTGAAAGACCTCTCT
TTAGAATAGATCGCGTGCTCATACCAGAAGGATTTGAATGTGTTACTTTT
AAAGTCGTTGCATTGATGTTTTCACATATACATACAGGGATATTTAGGGT
CATTCAACTCAAGTGAACTCAAAACTGATTCACTTTTGGCGTTAATTTTA
GTAGGTTTAATCAACTCGATGAGTTATTTGGGTCCTTGTTTCTGGTCTTT
TCGCTATTTATATCCTTATAATTTCAAGTGTGACTTAAAAATTCAGACTG
TTTTTTTTGGAGGGCTAATCAATCAGTTTAAAGGTTTTGTTTTTAAATAA
GAGTGATATCGTTTGCTTACTCATCAATTTTAATTTACAAGCTTTTTGAT
ATTGAATTAACACGGATGCGGAGCAAGATTGGTGAGAGGAAGGAAAAACA
ATTTTTTTTGTTTATTCAGCACAATATAACAATACAAAGACACTGTCCTG
GTATGAAACATGTGCTTGATATGAAACAGGAACACTTATGTAAAAATGAA
ATCTTTAAAATACATCTCATTATTTCTATACATTTCAACCTTAGGTAAGC
AAAAGCTTGATGTTGGCGAGTACTGTACAAAACGTGACAAAACGCATTTC
AAATGTGATTATCGACAAAAGGCGATTGGTTGTTTAGAAGTGGAAGAGGG
CGGTGGGCGTTGTGTGTTAAAGAAGAGCCCGGGGAGAGGTAGACGGTCTC
TCTCTTCAGCGCAAATACAAAAGAACGTTGACCGGTTTTGTGAGTTTCGT
GACGATGGGGATTTCGTGTTTCCGTTGAAATGCCGTATTTACATCAACTG
TTTTGAAGGGAAAGCATCGTTTGCGTCGTGTGCTGACGGGGAGCGTTTTC
ATCCTGAACTCAGGAAATGTGTAAAAGCTGCGGATGTTGATTGTGAAACA
CCTGGATTGAAAACACAAGAAGGTATTTGAAATTTTTTATAACTTAAGTT
GCACTAGGATACAATAATGACATAAGATTCTAACCCAATAACCTTCTTTT
ATCAGAATGTATTTGTGCGCCATTTAAATTACTTTGAATTGGTTGCCCTA
TAACTCGTGACAAGATTTCCGACTTTTTTGACTTGCTTCAAAATATAAAA
GGGAACTCAGATAATACCAATAATATTCCATTTTCCAAACAAGATTAAAG
GTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTACTCATCAATTTTAA
TTCACAAGCTTTTTCACATTGGATTGACACGAATGTGGAGCAAGATTTGT
CAAAAAGAGGAAAAGAAAAACATTTTTTTGCTTATATCAGCATAACATAA
CAATAGGTAGACACTGTCCTGGTATGAAATATGTCTGATATGAAACGGAA
ACACTTACGTAAAAATAAAACCTTTAAGCTGCTCTACTACTTTTCAATAT
TTTCCTTTTTGTAGTATTTCAAGTCAAGACCGAAATCAAACGTTCAAAGC
TTCGAGAAATAATCCCCATAGTGCACAAATTTTACTCCGTCACTCTCGAT
ATTAAACCTAAAACACCTGCTCGTGGTGGGTGGAATAGTGTTTTCCACGC
TACTATCAAGTCAAGTTGGACATACTACGGTGATAGAACGCCCAGTATAG
TTATGCACAAAGATACTACAAAGTTACAGGTAATTTGAATTTTTTACTAG
TGATATTTTGTATGCCGTTTTTTAGGAACCTGCGATGAAATATAGACGTT
ATTGCCGCTGCAAATACGAGAGAGTATTTTGAACTAGAATTTTCACTTAA
GTCCGCGTAATGGTTTAACATAGTCTTTTTGAAAGCTTTTTTTTTAAGAT
CATTTTTATAATTTTACACTCCTGATTATCTTTCAACACCACGAAACAAC
TATCTTTATTGGAATTATAGTAAAAGTTGCCTTTTTCGAGACAAATTTAT
AATCGCGTAACCTAGTATCAAGTGTAAAAAGTTATTCCGTCTAGGACGGG
TTTCCGTCTCAGAGAAAAATAAAAGGTCACTAATAAATTCTGCGTATTTC
ACCAAAATTTCAAGAAAATGTGCTAATTTGCTGTGTAAGATTTATTCTAT
CTCAGAAAAAGACAAATAACCTTGCTTTGACCATGGAGTATTGCTTTTTA
CCATTGTGTTTTTTGATTTTCAGTTTTGTGGACCTCTCAACTATCCAAAT
CCAATTCTATGTCAAAGTCCTGCTCCACCAATACCTCTTAACAAATTTAC
CAAGATTAAGATCCAACAAATTCCCAACGGAGATGATTCCAAATTCATTG
TTTACATCAATGGAAAAACTGTTTGGACAGCTACACCAAACTATCCAACC
ATGTTTTCGAACGTGAAAGTTTATGAAGGGGATCCATATTTCCCTGCTGC
TAACATTGAAACCAAGAACTATAAATTTCAATCAGGTAGCTAACTCTCTA
GTTTTTGGGTGTGCTTCCAGCACGTGTCGAAAATTCTATTTTTTTTTAAT
GGTGAATAATGCCTACGAAAGGTTGAAATTTCCTTATTTCCCTGCTGCTA
ACATTGAAACCAAGAATTATAAGTTTCAATCAGGTAACTCTCTAGTTTTT
GGGTGTGCTTCCAGCACGTGTCGAAAATTCTAAATTTTTTTAATGGTGAA
TAATGCCTACGAAAGGTTGAAATTTCCTTATTTCCCTGCTGGTAACATTG
AAACCAAGAATTATAAGTTTCAATCAGGTAACTCTCTAGTTTTTGGGTGT
GCTTCCAGCACGTGTCGAAAATTCGAACTTCTTTTAGTGGTGAATAATGC
CTACGAAAGGTTGAAATATCCTTATTTCCCTGCTGCTAACATTGAAACCA
AGAATTATAAGTTTCAATCAGGTAACTCTCTGTTTTTTGGGTGTGCTTCC
AGCACGTGTCGAAAATTCGAATTTTTTTTAATGGTGAATAATGCCTACGA
AAGGTTGAAATATCCTTATTTCCCTGCTGCTAACACATTGAAACCAAGAA
TTATAAGTTTCAATCAGGTAACTCTCTGTTTTTTGGTGTGTCTCCAGCAC
GTGTAAATTTCAGTCAGGTAATTCTAACTTCTGAGAAACTGAACTTCAAC
TTTTGTTCAAACAAGTCAAATAACTACAAAAAAAGGATTTCTATAGGAAA
GTTTTTTATTTCATTCCAAAAGACTTCATTCAGATGTTATAATAATATTA
AGCCGCCGTTTCAAACCAATAATTTTTTGTCCGCTTAGTTTTAGTTTAAT
AGAGATCTAAAAAGAGTGTTCTCTAGTATACGGTAAAAAAAATAATATTG
AACACTATTCTTTAAACTTCTACAATTCTTCATCTTAGGGATCACTGCAG
GTCACGTCCTTGAAACTGTCAAGAAACTGCAAAACATGTGGACACTCAAA
CTCGCCATCATTCCCGTCAAAACACAAAACGGTGACACAAGCATTCTCCA
CGCTACACCTTACTTCGATAGCCGTACAGTGGGAGAACTAAAAATCGATT
TCCTTGATAAAACAACCAGGCTTCGTATCTGTGTACCGTCGCTCTCGACA
TCTTATACACCCTACTGCATCACATTCCCACGCTCCTTACCACTAAGCAA
GTTGGCAAAGATCCAGATTCGCCGTCGACCAGCAGTCTCTGGAACTGATT
ACATTATCCATTTGAACGGGGAACAGAAATACAAGTTTAACGATCCAACA
CCAAATAAAGTTGATGATGTAAATATGTATCTCTCTGATCCTTTCATGGC
GCCCGCTAATGCTGTTCTGGAAGCATACCAATTCAATAATGGTAAGTATA
AGAGGATGACCCTTCAAGAATTGTGGAGACTCTAAGTTTAACTTGAATCT
CTATAACTGGAATGTTCTTAACTCGAACAGGTTTTATTGTCCATTAAGTT
AACAATGCCTTCAATAAACCTTACTCCTTACTCGAAATTTCCTTATATAA
CTTGATATACTTGCTCCTTGCGAGCTCCGTAAGTGAATACCTGAGTTGTT
TTTTCGTTTTTTTTTGGAAAAAAATATTTTTTGGGAACGAGATTTTTACT
GCTATGAGATATTGAGCAATCCTTCACTTATAAATCCGTTTAAATCTTTA
CATTGTTGTCAACTTCTCTCTCCAGGCGTTCAGAAAGGTCACGTCATAGA
TGAAAAATCCAGTCTCGGCCCAGCCTGGAAACTCAATCTTAAGATCACCA
TAACCAACACACAGCATACGGGCTGGATCAACATTCTACACGCTGTCAAC
AATGGTGTCTCAAGTGATTTATTGTTTTATGTTTTCATTCAACCGAGAAC
AACACGCCCATACATCTGTACCGCCCTCAAACAAGGTGGCGCCAACCTAT
GTACATCCACGTCATCGCTATCCTTGAATAGACCAACTTTGATTGAAATA
GATCATTTTCAATCTTCTGGGAAATATTACTATCAGATGACTGTTGGTGG
ACAAGCAGTGTATTTGGATGCGAGCAAAAGGCGACCAAAACCCATTCTGA
ATGCAAATCCAAGGACATTTGAAAATGTGGTTGTTTATGCGTCAAGCCCT
TACTATAACAAACCTTCTGACAATGTAGAAATTAGTGGATATAGTTTAGT
GCAAAACGTTGATCGGTTTTAATCGGATTAATTTTCGTGAACCAAAAAAA
CAAAAAAAGAAAAGATTTATTTTCGCGAATTGGCATTAAGAAAAATTCGA
ATCAGTCGAAATAACGAAACTGGCCCCGAAAACGCCCAAATGAGCACGAA
AATAANTTCCTTACTCGAAATTTCCTTAACTTGATATACTTGCTCCTTGC
GAGCTCCGTAAGTGAATACCTGAGTTGTTTTTTCGTTTTTTTTTGGAAAA
AAATATTCTTTGGGAACGAGATTTTTACTGCTATGAGATATTGAGCAATC
CTTCACTTATAAATCCGTTTAAATCTTTACATTGTTGTCAACTTCTCTCT
CCAGGCGTTCAGAAAGGTCACGTCATAGATGAAAAATCCAGTCTCGGCCC
AGCCTGGAAACTCAATCTTAAGATCACCATAACCAACACACAGCATACGG
GCTGGATCAACATTCTACACGCTGTCAACAATGGTGTCTCAAGTGATTTA
TTGTTTTATGTTTTCATTCAACCGAGAACAACACGCCCATACATCTGTAC
CGCCCTCAAACAAGGTGGCGCCAACCTATGTACATCCACGTCATCGCTAT
CCTTGAATAGACCAACTTTGATTGAAATAGATCATTTTCAATCTTCTGGG
AAATATTACTATCAGATGACTGTTGGTGGACAAGCAGTGTATTTGGATGC
GAGCAAAAGGCGACCAAAACCCATTCTGAATGCAAATCCAAGGACATTTG
AAAATGTGGTTGTTTATGCGTCAAGCCCTTACTATAACGAACCTTCTGAC
AATGTAGAAATTAGTGGATATAGTTTAGTGCAAAACGTTGATCGGTTTTA
ATCGGATTAATTTTCGTGAACCAAAAAAACAAAAAAAGAAAAGATTTATT
TTCGCGAATTGGCATTAAGAAAAATTCGAATCAGTCGAAATAACGAAACT
GGCCCCGAAAACGCCCAAATGAGCACGAAAATAAGTGCGATTAAAGTAGA
ACATTTTAACCAATATTCGAACCAGAGTTGTACTTTCTCTTTATATTTCT
TATGTATATGTTTCTTATGTATCTTTTTGCATTATAGTACGATTGTGTAA

Coding sequence (CDS) from alignment at scaffold_56:556644..565993-

>TCONS_00070530 ID=TCONS_00070530|Name=TCONS_00070530|organism=Clytia hemisphaerica|type=CDS|length=2784bp|location=Sequence derived from alignment at scaffold_56:556644..565993- (Clytia hemisphaerica)
GAAAGATTTAGATACAGAAAGGAGGAAATAAGTAACTATCAAACGAACAT
TTCAAAAAAATATAACATGGCAAGCATAGCCATAACGGCTGTTTTACTAC
AGCTTTTAATCATCCGGGTATGGTGTATACCGGACCTGATCAAAAAGTCT
CCGAATGGAGACTCGGAAGCACAATACGGTAAAAGTCTTTTCGATGATAG
GAAATATAACGATAATGATCCGACAAAGGAGTTTGTTACAGATCAACTAA
GTATATCAATTAAGAAAGCTGGTATCAATTGGAATGGTTTTAAATTTTTT
GGCCTTGATTTCAATCAACCGGATCAAATTGGAGGCGATGTCAAGATTCA
TTTTAATGGATTCCTTACATTTGGTTCTGAATCAACAAAAGAAGCCACAG
CTGGAAAATGTATCCGTGTTGGATTTGAATCGAATTTCTTGGCTCCTTAC
TGGATGCGCTATTTCAAAGGATCAGTACGTGTGTTTGAGCTCGGCAAAAC
CGGTCAAGCAAAGACAGATCGAGAAAATATCATAAAGGATCTCTTCAAAG
CAGGGATTCTGGCCAACCCTAGCAAAAAGGCCACAAGTGAAGCGAGAATC
ATTGTTTTGACTTGGCTCAAAATGAGATCTAGTGGAACATATGATCCTTC
CTTACAAAAATGGGGTAAAGGATTCAAGAACACATTTCAAATGTTTGTCA
TTCTCCACGCAGGAGAGACATACATCAAATACTATTACCGATCGTTGGAT
ACCAACAAGATTTTTGTCGGTGGGATAGTGCCTTGCTATGGAAGGATTGG
TATTTCAAGATACAGGCAAAACGTAGATCCAAAATCTTGTAAACTGGAAA
GGAACTCTTTCGGAATTGACAACTTATCTGGAAAATTGAATAAAATTCCG
CAAAAGATCGAATATTATTCAAATGAAGGGAACGATGGCGATATGGGAAG
TTGGAGTTTCCGTGTCAGCCCAAAGCAATGTAAGCAAAAGCTTGATGTTG
GCGAGTACTGTACAAAACGTGACAAAACGCATTTCAAATGTGATTATCGA
CAAAAGGCGATTGGTTGTTTAGAAGTGGAAGAGGGCGGTGGGCGTTGTGT
GTTAAAGAAGAGCCCGGGGAGAGGTAGACGGTCTCTCTCTTCAGCGCAAA
TACAAAAGAACGTTGACCGGTTTTGTGAGTTTCGTGACGATGGGGATTTC
GTGTTTCCGTTGAAATGCCGTATTTACATCAACTGTTTTGAAGGGAAAGC
ATCGTTTGCGTCGTGTGCTGACGGGGAGCGTTTTCATCCTGAACTCAGGA
AATGTGTAAAAGCTGCGGATGTTGATTGTGAAACACCTGGATTGAAAACA
CAAGAAGTATTTCAAGTCAAGACCGAAATCAAACGTTCAAAGCTTCGAGA
AATAATCCCCATAGTGCACAAATTTTACTCCGTCACTCTCGATATTAAAC
CTAAAACACCTGCTCGTGGTGGGTGGAATAGTGTTTTCCACGCTACTATC
AAGTCAAGTTGGACATACTACGGTGATAGAACGCCCAGTATAGTTATGCA
CAAAGATACTACAAAGTTACAGTTTTGTGGACCTCTCAACTATCCAAATC
CAATTCTATGTCAAAGTCCTGCTCCACCAATACCTCTTAACAAATTTACC
AAGATTAAGATCCAACAAATTCCCAACGGAGATGATTCCAAATTCATTGT
TTACATCAATGGAAAAACTGTTTGGACAGCTACACCAAACTATCCAACCA
TGTTTTCGAACGTGAAAGTTTATGAAGGGGATCCATATTTCCCTGCTGCT
AACATTGAAACCAAGAATTATAAGTTTCAATCAGGGATCACTGCAGGTCA
CGTCCTTGAAACTGTCAAGAAACTGCAAAACATGTGGACACTCAAACTCG
CCATCATTCCCGTCAAAACACAAAACGGTGACACAAGCATTCTCCACGCT
ACACCTTACTTCGATAGCCGTACAGTGGGAGAACTAAAAATCGATTTCCT
TGATAAAACAACCAGGCTTCGTATCTGTGTACCGTCGCTCTCGACATCTT
ATACACCCTACTGCATCACATTCCCACGCTCCTTACCACTAAGCAAGTTG
GCAAAGATCCAGATTCGCCGTCGACCAGCAGTCTCTGGAACTGATTACAT
TATCCATTTGAACGGGGAACAGAAATACAAGTTTAACGATCCAACACCAA
ATAAAGTTGATGATGTAAATATGTATCTCTCTGATCCTTTCATGGCGCCC
GCTAATGCTGTTCTGGAAGCATACCAATTCAATAATGGCGTTCAGAAAGG
TCACGTCATAGATGAAAAATCCAGTCTCGGCCCAGCCTGGAAACTCAATC
TTAAGATCACCATAACCAACACACAGCATACGGGCTGGATCAACATTCTA
CACGCTGTCAACAATGGTGTCTCAAGTGATTTATTGTTTTATGTTTTCAT
TCAACCGAGAACAACACGCCCATACATCTGTACCGCCCTCAAACAAGGTG
GCGCCAACCTATGTACATCCACGTCATCGCTATCCTTGAATAGACCAACT
TTGATTGAAATAGATCATTTTCAATCTTCTGGGAAATATTACTATCAGAT
GACTGTTGGTGGACAAGCAGTGTATTTGGATGCGAGCAAAAGGCGACCAA
AACCCATTCTGAATGCAAATCCAAGGACATTTGAAAATGTGGTTGTTTAT
GCGTCAAGCCCTTACTATAACGAACCTTCTGACAATGTAGAAATTAGTGG
ATATAGTTTAGTGCAAAACGTTGATCGGTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043902XLOC_043902Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070530-exon-scaffold_56-1575043694:565649..565993TCONS_00070530-exon-scaffold_56-1575043694:565649..565993Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:564737..565057TCONS_00070530-exon-scaffold_56-1575043694:564737..565057Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:564085..564213TCONS_00070530-exon-scaffold_56-1575043694:564085..564213Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:563318..563428TCONS_00070530-exon-scaffold_56-1575043694:563318..563428Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:562769..562841TCONS_00070530-exon-scaffold_56-1575043694:562769..562841Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:561372..561749TCONS_00070530-exon-scaffold_56-1575043694:561372..561749Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:560665..560879TCONS_00070530-exon-scaffold_56-1575043694:560665..560879Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:559940..560170TCONS_00070530-exon-scaffold_56-1575043694:559940..560170Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:559327..559357TCONS_00070530-exon-scaffold_56-1575043694:559327..559357Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:558553..559005TCONS_00070530-exon-scaffold_56-1575043694:558553..559005Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1575043694:556644..557389TCONS_00070530-exon-scaffold_56-1575043694:556644..557389Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:565649..565993TCONS_00070530-exon-scaffold_56-1510915933:565649..565993Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:564737..565057TCONS_00070530-exon-scaffold_56-1510915933:564737..565057Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:564085..564213TCONS_00070530-exon-scaffold_56-1510915933:564085..564213Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:563318..563428TCONS_00070530-exon-scaffold_56-1510915933:563318..563428Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:562769..562841TCONS_00070530-exon-scaffold_56-1510915933:562769..562841Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:561372..561749TCONS_00070530-exon-scaffold_56-1510915933:561372..561749Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:560665..560879TCONS_00070530-exon-scaffold_56-1510915933:560665..560879Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:559940..560170TCONS_00070530-exon-scaffold_56-1510915933:559940..560170Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:559327..559357TCONS_00070530-exon-scaffold_56-1510915933:559327..559357Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:558553..559005TCONS_00070530-exon-scaffold_56-1510915933:558553..559005Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1510915933:556644..557389TCONS_00070530-exon-scaffold_56-1510915933:556644..557389Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:565649..565993TCONS_00070530-exon-scaffold_56-1491911889:565649..565993Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:564737..565057TCONS_00070530-exon-scaffold_56-1491911889:564737..565057Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:564085..564213TCONS_00070530-exon-scaffold_56-1491911889:564085..564213Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:563318..563428TCONS_00070530-exon-scaffold_56-1491911889:563318..563428Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:562769..562841TCONS_00070530-exon-scaffold_56-1491911889:562769..562841Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:561372..561749TCONS_00070530-exon-scaffold_56-1491911889:561372..561749Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:560665..560879TCONS_00070530-exon-scaffold_56-1491911889:560665..560879Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:559940..560170TCONS_00070530-exon-scaffold_56-1491911889:559940..560170Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:559327..559357TCONS_00070530-exon-scaffold_56-1491911889:559327..559357Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:558553..559005TCONS_00070530-exon-scaffold_56-1491911889:558553..559005Clytia hemisphaericaexon
TCONS_00070530-exon-scaffold_56-1491911889:556644..557389TCONS_00070530-exon-scaffold_56-1491911889:556644..557389Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070530-proteinTCONS_00070530-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:556644..565993 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0793495	0	0	0.0380921	0.0173425	0.020923	0	0	0	0	0	3.39352	7.63264	0.139779	0.00152297	0	0.603133	1.59835e-09	0.0461985	0	0	0.0856033	0.0339287	0	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070530 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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