TCONS_00070704 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070704
Unique NameTCONS_00070704
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3914

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070704 ID=TCONS_00070704|Name=TCONS_00070704|organism=Clytia hemisphaerica|type=transcript|length=3914bp
GTAATATTTACAGTAATTAGTGTGATTCAATTTGGTGGAATTATATACCT
ATATGTTAGCCATGTAAAGAAGTGATTGGATTTGAAACGGTGCAACCATG
ATACCGATCAACCTTCTGGTAAAGCTCATAACCACCTTCATCATCTTACA
ACATTTCGAGTGCATTAAACACCATGTCAGCAGAAAATCAGTTGAAGGGC
GCCACAAGATACCTACAGTTTCAAAAAACAGTAAAAGTAATCTCCTaaaa
attgtcaataaaactaaaattgttaACGAAACACTTTCAAATAAAGAATT
TAACAATACGAAACGATGGTTAGAGTCTAGTTATTCACGTGGATTTCATT
CATCCAACAGTCTAGAAGATTCGAGCCTGGATTCCAACTCACTCTATGAG
TATAAGACAGATTCACGACAGAATTTTCTAACGGGAAATAATGATGAATC
TTATGGGAGCGATATTGATGCGTTTTTGAAACCAGGAATTGGTGATTACC
CATCTGACATGGATGGTCTCGATGACTCCTTAAAAATGTACGGCGCTGAA
ACATCACATCACCAAACACCCTCCAACACAGCTGCTTTTTCATCAAGCTC
ATTGCACTCCACTGGTACATCTTCGCTAGACGACACAATGCTCACAGACC
TATTAAGTAAAAATATAGAACCGTCAGAAGGAAGCAAAacagaaaaaggg
gaaaacctaCAGAAATTCGCTTCCCCGTTAGAGAGTAATTCAAACTCAGC
CTCCATCGTTTCTGACGCAATCAACCAAGATGAGGTCTCCCCCGCAAAGG
TTATTGATAATGCTTTAACGAACATCGAGCAAGAAGCTGCAAAACTTATA
AAGGAGAGCAAAAATACACATGGCTCGGGGTCTGGGGATACTGAGGAAAC
GACGTCATCTTTGACTGTTgatttatcaaaaacaaaagGTGAAACGAAGG
AGGGTGATGTGACATCAGCGATGCTTTCCCACTCAGACGATGCAAGTAAA
GCTTTAAAAGAAGCCACCCAGAATGCACCAGAGGATGATTCAGTGACACT
TCTTAGTGATTCGAAAGAAGTAGCTTCGGGAAGTGGAGTTGGTGATCTCT
CTTCAGAAACTAACACCAAACAGgGAAAAGAAGTAAAGATCTCCAAAATG
TTCAAAGCTGAGGAGAAAGACAAACATAAAACAAACGTTAAACATGTCAA
AGGTACTAGACGCCAGGAGGATAGTATCTATCAAATCGATCCAATGTATT
CGGAAGGCTATGATGTAGACTCCGCTGTCAAAACATACCAAGTCAGTCCA
AAACTTGTATCTTCTATCAGTCAAGCTATCAAAGGGATGGATGAAGAGGA
GACTGGAGTCAAGCTTGGAAACGAGGCTGTCTCTATGGAAGCTGAAAAAG
GCGCCATGTTGCCAAGTGAACAACAGAATACAAAGAGTTTCAATGgaatt
caacaacaacaaaatgaaaTACATACTAACCCATCTAAACAGTCTCGTTT
TGAAGAGAATGAGAATAAGATGTATGCAAACGAGGCTCCTATACATGGAA
AAGAGGCTGGTGAAGtgaaatttgttcaaaaagaaCATGGTAAAGAGTca
gaaacaaaggaaaaagaaagTGAATCTGAGGACGAGGCTAataaaaaaca
caacaaaaagcAAACCAAATTTCAcgagaagaagaaagaagaagaagaca
cgtcaaaaatgaaaaatgaaaaaggacaCAAAGTGACAAAAGCGACAAAA
GCAAGTAAAGAACAacatcatcaaaaagaaaaaaaggtatcTGAAGAAGA
TAATTTTAATCATCAATCACCCAGCGAGCCTGTGGAGGAGAATCAAAAAT
CAAAGGAGGGGGAGAGCAGTGCTGAAAACAATGACGGAGGAGATCTACTT
GAGGATAACCTCATGAAAATGGATAAGAAAAAGTTGGTAAAGCTTTTAGC
GAAATTCATGAGAGACAGTAAGAAAAAAACAGATGATTCGGAGAAAAACC
ATCAAACACCTGCTGGCGGTAACGGTGGCGGAATGCAAGCGACCCTTGGC
TTACACCCTTTATTGTTAGGTGCTATGGGAGGCGGTGGTCATAAAGCAAG
TGGTGATAAAGGATCACAGTTTGTCTATATGAATGAATTACCGTCAAAAG
CTATCAAAGTTGACCAACCGAGCGAAGAAGAGTTGACTGAGAAATCTACT
TCTAGTAAAGTCGATCATGATCCGTATGTTGATATTGGATCCAGTGATCC
TACAGATGGTGACAAGGCTGTGCAGTCACATAATCGACAAAAAGTGACGT
CATCTAAAgatgaaaaatccgggggtagtgatgataaagaagaaaaagag
gAGAAGGGCTCAAAGGAAGATGAGAAGGAGAAAGAAACAACGGAAGTAGG
AAAGGAGAAAAACGAtgcaaaattttccaaagaggATTCCAAGGAAGATG
GCGGAAAAACAAACGAGGCTAAAGTAAACGAGTCGAAAGAAGACGATGAG
AAGGAAGCGAGCGAGACAAAAGAAGATACAAAAGTGAGCGAGTCAAAGGA
AGATGCAAAGGTTAGCGAGGCAAAGGAAGATGCCAAGGTTGGCGAGACAA
AAGAAGAAGACAAATCAAGCGAATCGAAAGAGGATGACAAGGCAAGCGAG
GCAAAAGAGGATGCGAAAGTAAGCGAGACAGAACAAGATGAGCAGGAAAA
AGCACAACATCTTATTTCAGGTCAAACTTTACTAAAGgatgaaaaggaaa
aagaagaaagtgaaaaatcagAAGGAGACGATCAAGTCGTGGCTTCACTT
TCTAAGAGTAAAGAGGAAGACTCAAAAGACGAACACGACCTTGTCAATAA
AATCATGGAAAAAGAGAAAACGTATACTAGCAAACTAGCCGCTGATATTC
ACCAACATTTATCAAGTGACAGCTCAGACCCTAATAATGAGGATGACAGT
GCTGGAAATAAAGGAGCAGAAAAAAATTCTGAAGCATTGAGCGCTGATGA
AGCGGAGCAACTGAGTTCATCTAAGGAcgaaaatattaagaaattgattc
aaaaaattaaagagAAACTTGAATCaaagaaaactaaaaaacatCATGGT
CAAACGGCAAATCATTACGATGATGTTTACGCAGAGATTGGATCGTTTGG
TAAGCGTGACCATGGAATcgtgaaaaaatcatttaaacGTCATCGCCACG
TGTTTTAAATCGTatcattgttttaaaaagaactGTAAACTGTAActttt
gaaagctattttacGGTTTTGAGTATAATGACGCTCCTTCGAATTTTAAG
AGATCAATTTTGTTCATTTTGGAGGTTAATACTTTGCAAATTGCAATCAA
GGAGATCAAGAAAATGAGCTTATTTGGATTAAGTTTTGTTTTATATGCAA
TCAAGGATTCACGGTACTATTTTCCAAGTTTCATAACGCTTGGTTGTGAC
GCTAGAGTAATACATgcaaattttactaaaaaaccAAGAAATATGGAAAG
ATTATTGCTTGATACCATGGAACTTGTTTATtaccaaaatatacataata
TACATAATTGACATACACAGTTTTCAGAGCAATGGAATGTTATGTTAGCG
TATAAAATAGTCTggatcgcagacctctacaaaaccccatgtagtatagg
agcacgaatccgttagtggatgcctgCAGTCTACGTATAACACTGATCAA
TAGTCGTTTTGGACGCCTTGAGTCTCTGTACATTCATAACTACACCCCTG
TCTAGcagccctggtggaactttttttcctcAGTGTGGATAAGAATTCTT
ATTAAAATCCCAGtaaagatagaaattttattgttccaaggttaaaataT
CAAGGGGGGAgattttgaagtgcaattttttacatcgAATggagataaaa
tcaaagtcaatttc
Run BLAST on NCBI

protein sequence of TCONS_00070704-protein

>TCONS_00070704-protein ID=TCONS_00070704-protein|Name=TCONS_00070704-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1036bp
MIPINLLVKLITTFIILQHFECIKHHVSRKSVEGRHKIPTVSKNSKSNLL
KIVNKTKIVNETLSNKEFNNTKRWLESSYSRGFHSSNSLEDSSLDSNSLY
EYKTDSRQNFLTGNNDESYGSDIDAFLKPGIGDYPSDMDGLDDSLKMYGA
ETSHHQTPSNTAAFSSSSLHSTGTSSLDDTMLTDLLSKNIEPSEGSKTEK
GENLQKFASPLESNSNSASIVSDAINQDEVSPAKVIDNALTNIEQEAAKL
IKESKNTHGSGSGDTEETTSSLTVDLSKTKGETKEGDVTSAMLSHSDDAS
KALKEATQNAPEDDSVTLLSDSKEVASGSGVGDLSSETNTKQGKEVKISK
MFKAEEKDKHKTNVKHVKGTRRQEDSIYQIDPMYSEGYDVDSAVKTYQVS
PKLVSSISQAIKGMDEEETGVKLGNEAVSMEAEKGAMLPSEQQNTKSFNG
IQQQQNEIHTNPSKQSRFEENENKMYANEAPIHGKEAGEVKFVQKEHGKE
SETKEKESESEDEANKKHNKKQTKFHEKKKEEEDTSKMKNEKGHKVTKAT
KASKEQHHQKEKKVSEEDNFNHQSPSEPVEENQKSKEGESSAENNDGGDL
LEDNLMKMDKKKLVKLLAKFMRDSKKKTDDSEKNHQTPAGGNGGGMQATL
GLHPLLLGAMGGGGHKASGDKGSQFVYMNELPSKAIKVDQPSEEELTEKS
TSSKVDHDPYVDIGSSDPTDGDKAVQSHNRQKVTSSKDEKSGGSDDKEEK
EEKGSKEDEKEKETTEVGKEKNDAKFSKEDSKEDGGKTNEAKVNESKEDD
EKEASETKEDTKVSESKEDAKVSEAKEDAKVGETKEEDKSSESKEDDKAS
EAKEDAKVSETEQDEQEKAQHLISGQTLLKDEKEKEESEKSEGDDQVVAS
LSKSKEEDSKDEHDLVNKIMEKEKTYTSKLAADIHQHLSSDSSDPNNEDD
SAGNKGAEKNSEALSADEAEQLSSSKDENIKKLIQKIKEKLESKKTKKHH
GQTANHYDDVYAEIGSFGKRDHGIVKKSFKRHRHVF
Run BLAST on NCBI

transcript from alignment at scaffold_57:754967..765228-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070704 ID=TCONS_00070704|Name=TCONS_00070704|organism=Clytia hemisphaerica|type=transcript|length=10262bp|location=Sequence derived from alignment at scaffold_57:754967..765228- (Clytia hemisphaerica)
GTAATATTTACAGTAATTAGTGTGATTCAATTTGGTGGAATTATATACCT
ATATGTTAGCCATGTAAAGAAGTGATTGGATTTGAAACGGTAAGATTTTG
AGATAGTGTCGGATACTCTATGAAAATTGGCTTGTGGGTTACTCTCGGAT
GCCTAATAAGCGGGGGGTGGGTGGAAAAATTCTCAAAACTTAATAAGTGG
GGGGAGAGGGTTGGAATAAAACTGTCCTGGGTGGAAAATTTTTGAAAAGG
AGGCTAATACAGCAAATTAGGGCAATAGAAGGAGCTTTCAAAAACATTTT
CCCAAAAATCAATAAGCGTGGGGTTGGAATAAGAATGTCCTGGGTGGAAA
ATTTTCGAAAAAATTAATTAGCAGCCCCCCCCTGCTTATTATTAGTACCC
GAGAGTAGGGGGTTTATAATTCAATATATATAAAAGTCTTTGACAGTTAA
TTGAAATAAATATCGAGAATGCTGAGAAACTCTCCTAAAGGTGAATGTCT
GGTTCCTCCATCTTCAAAGACTGGAGGATTTGATACATATACTCTTGTTT
TACTTCATGTAGCTGTTCCAATAAAAAACCAGACAGGATGATGTACGAAC
CTTTTCAAATCAGAAAAAAATTCTTAGAAATGCGTGCATACCCAATGGAA
AATGGAGAAAGTTTGCAAAGAAACCTTTAGAATGAGCTCTTCCAGAAAAT
TTTTGTACATGGGGCTAAAATCTGCAAAATTTGCTTTGTTTTAGGGGCAA
ACTTGCTCTGATTAGGGGTGATTTGAATGTCCGGGGGAAAAAACAATTAA
AAAGTCAATTTTTTTTCTGGAAGAGCCCAATAATCTTTTTCATATCTTTA
AATTGACGGTTTGGACAACCTGAAACCATTCTTTTACCCCCTGGAAATTT
TAAAATAACTTTTTACACCCTGCAATTTTCTCTACTTTATTTTCATTACA
GCAGGTGCAACCATGATACCGATCAACCTTCTGGTAAAGCTCATAACCAC
CTTCATCATCTTACAACATTTCGAGTGCATTAAACACCATGTCAGCAGAA
AATCAGTTGAAGGGCGCCACAAGATACCTACAGTTTCAAAAAACAGTAAA
AGTAATCTCCTAAAAATTGTCAATAAAACTAAAATTGTTAACGAAACACT
TTCAAATAAAGAATTTAACAATACGAAACGATGGTTAGAGTCTAGTTATT
CACGTGGATTTCATTCATCCAACAGTCTAGAAGATTCGAGCCTGGATTCC
AACTCACTCTATGAGTATAAGACAGATTCACGACAGAATTTTCTAACGGG
AAATAATGATGAATCTTATGGGAGCGATATTGATGCGTTTTTGAAACCAG
GTAATTTATCTTTATTTTTGCCACCGTCTAAGTAGCTTCAAACCCACATA
TATCTTATAACACTAGATAGAGCTACTCCATCCCTTGCTGAATCAAAATA
ATCCGCCATCTTTGATAATCTTTGGTGCCGACAATTTGATTGATCAAGTC
TATCTTTCACCTGGTCGCCCCGGGGGGGGGGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCTCTAGTTTTTCCGACCCTTACAGTGCATTTGAGGTG
CCTTGAAAAAGACACCCTTAGTGCCCGCACATACCCGTCGGTCCTTTTGC
CCAGCTGCCCCCCCGGGCTGGTCGCTTTGCGCTATTCAGGTTTCTTTTCT
TTTGCTTGGTTGAACAAATTGCAGGTGCTGAGCTGTGACCTATTTTAACC
AAAGATGGTGCATTATTTTGATTCAGCTGCCATCGTTGGGAAATGCAGAG
TAGCTCTATCTAGTGTTTTATACAAGATATCGCCTATGTTCAAACCTACG
ACCCAGGATAAAAACTTAGTTACTGTAAGTCAAGATCTCATAATTGAAGT
TAGATTCTGGCTTTTCATGTACTTATTGGTATGTCCTCTTACCAAATCCA
TGGCCTGCAAATTTAGTTGCAAGTTTGCACATAACATTGTTTCTACCTTC
GTTTAACAATATACACGCTTTTTTTATAAGAATAACGTACTTATGGTTGA
GTGCGCATTATTGTTATTTTTCCTTTTGTTCTAAACAATACATGATATGC
ACCACTGCAATGTCTTCCATTCCACCCAATAGCTCATTGGTTGTAAGTGA
CGTAAAATCAGTTAATACGTCACTTTCAACCAATTAGCTATTGGGTGGAA
TGGAAGACATTGCAATGGTGCATATCATGAATAGGCCTATTGTTCTAACA
TGAAAAACGAAATCTCACCCTAATATTCTTATAGAAAAAAAAGCGTGTAT
GTACGTTTTGTTCCCACATTTACAGGAAGCGTGTCCAGCTTTAGAGCTGA
CTAGATAACATAACCCCCGTTTTTAGTAATAAGTTGGAGATTTGATATTT
CACAGAAAAGTGCTACCAAGGGGGATTTCGGGTCCCATATCTTCCGAAGG
ACTTTTCTGTTCGCCTTGAAAGTTTACAAACTTCTTAACCTAAGGTTGAA
CTACCACTGGTGTAAAAATGAACGTTATAGCATAATTAGAAAAAAAGCTC
AATTTTTACAATCGCAAATTTAACCGCTAAAAATCGCCAATTTTTACAAC
CAAAAATACATAGCGCTTTTGATTTTCTAAAACAAGCAAAAAAAATTTCC
ATAATCATATTTGACTATCAAAAGTTACAGGCATTCTTGTTTCCACTGCC
AATCATATCTGGACAGACTTTTAATATTTTTGCATGAGCTTTTTTCATTT
CTTCTTCATTTTCTCTTCTTCTTTCATTCTCTTCAAGGAATTGGTGATTA
CCCATCTGACATGGATGGTCTCGATGACTCCTTAAAAATGTACGGCGCTG
AAACATCACATCACCAAACACCCTCCAACACAGCTGCTTTTTCATCAAGC
TCATTGCACTCCACTGGTACATCTTCGCTAGACGACACAATGCTCACAGA
CCTATTAAGTAAAAATATAGAACCGTCAGAAGGAAGCAAAACAGAAAAAG
GGGAAAACCTACAGAAATTCGCTTCCCCGTTAGAGAGTAATTCAAACTCA
GCCTCCATCGTTTCTGACGCAATCAACCAAGATGAGGTCTCCCCCGCAAA
GGTTATTGATAATGCTTTAACGAACATCGAGCAAGAAGCTGCAAAACTTA
TAAAGGAGAGCAAAAATACACATGGCTCGGGGTCTGGGGATACTGAGGAA
ACGACGTCATCTTTGACTGTTGATTTATCAAAAACAAAAGGTGAAACGAA
GGAGGGTGATGTGACATCAGCGATGCTTTCCCACTCAGACGATGCAAGTA
AAGCTTTAAAAGAAGCCACCCAGAATGCACCAGAGGTATATTTTACATGT
TTGTTTTAGAATACAGTCAACTCTCTCTAATTCGAATATCTATTATTCGA
ATCCTTCTGTAATTCGAACTTATCGTCGTTCCTCTCCAAGGAAAACCTTT
AGTAAAACGAGTAAAACGCTTTCTATAATTCGAATCTTTCTATAATTCGA
ACAATTTAGATTCCCTCTTCGAGTTCGAATTAGAGAGAGTCAACTGTATT
GATCAAATTTAGGCATTCGCCTTAGAGATTTATTTTTAATCTGTTATTAT
ACTTAGCCGTTAAAGAGCAATACACTCTTCTCGAGATGCATAAATTTATT
GTTGTCCTCGTTTTCAAACAGATTTCATTGCTATGAAATTATACATTTAA
ACCAATTTAAATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCAACACAATTATCATTGTGAATATGTAATTTTATAGCAA
TGAAATCTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAGAA
GAGTGTATTGGAACTTCGATAAAAGTTTGAGTGAAACAAGGAACTTTGAG
TTATATTTTACCGAAATTTGATAAGTGGAGGGGTGCTGGTATTTCGAAGG
TCGAAAGGGAGTGAGTGGATTTCGAAATATTAATTTATGGGTAACAGCTA
CCTGGGGAAAGTAAAGCTCAAGTGTTTCCCTGTAGTTTGTTTACGATTTT
ATTTATATTTTCTTTTTTTTTGTTTATGTACAGGATGATTCAGTGACACT
TCTTAGTGATTCGAAAGAAGTAGCTTCGGGAAGTGGAGTTGGTGATCTCT
CTTCAGAAACTAACACCAAACAGGTATTATATCCCTATAGCTCTATTGGA
CTCTTCCAGAAAAAATTCGTTCATTGGGGGTGGAAGATATATTACTTTGT
CAATGCCCCTAGACATCGCAGATTTACCCCCTGGACAATGCAATTTTTAG
GACTTTTTTTGGGACCCCTTGACAATTCATCTTCCACGCCCCCCATGAAC
GGATTTTTTTCTGGAAGAGCCCATTTCTAGTATCTAATTGTCGTAAATAC
GATCCCGGCTTGAGGACCGGATATCATAGGGACTATTTTTATAGTAAATC
TAATTTGTTTAACTTATTGAATGTTTAAAGGTTAAAAAACCTATTTTCAG
TCACATATAAGTTAGTAATTTATAATATGGGTGACACGCTCATGAAGATC
ACTTAGTTCGAGTGGTACATCATGACAATCCTCTGTCGTGTGCACAGAAC
TGTATGTCGTGTGCATTGGGCAACGCTAAGAGTTCTCACTTAAAAGTATG
ACCCATCTCCCAATATCATCATATCATTTCAAGTTAGCTATAGTCCTGCT
GCTGAAGTCGGAAAAAGTTGGTAGAAAGATATTTTCGTGGCGAATGATAT
TATCACATCAAATTTTTTTGGATATGGACAAAATTTGCTGAACATTTTCA
GAATTTACCTATCTTTATTTTTTATCAGGGAAAAGAAGTAAAGATCTCCA
AAATGTTCAAAGCTGAGGAGAAAGACAAACATAAAACAAACGTTAAACAT
GTCAAAGGTCAGTTATCAATCCACTTTTCCGAACAGGCTACTACCGATTT
TTCTACGTTTTCAAACATCTCTTAACGCTAAGCAATTTTACTTTAAAATC
TTAAACGATTACTCTTAGGTGCAAATAAACGGGGGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCGTTTATTTGGAA
CCTAAGAGTAGCCTTTTACTCTCTTCCCTTAAACTCTATAGGTACTAGAC
GCCAGGAGGATAGTATCTATCAAATCGATCCAATGTATTCGGAAGGCTAT
GATGTAGACTCCGCTGTCAAAACATACCAAGTCAGTCCAAAACTTGTATC
TTCTATCAGTCAAGCTATCAAAGGGATGGATGAAGAGGAGACTGGAGTCA
AGCTTGGAAACGAGGCTGTCTCTATGGAAGCTGAAAAAGGCGCCATGTTG
CCAAGTGAACAACAGAATACAAAGAGTTTCAATGGAATTCAACAACAACA
AAATGAAATACATACTAACCCATCTAAACAGTCTCGTTTTGAAGAGAATG
AGAATAAGATGTATGCAAACGAGGCTCCTATACATGGAAAAGAGACTGGT
GAAGTGAATTTCGTTCAAAAAGAACATGGTAAAGAGTCAGAAACAAAGGA
AAAAGAAAGTGAATCTGAGGACGAGGCTAATAAAACACACAACAAAAAGC
AAACCAAATTTCACGAGAAGAAGAAAGAAGAAGAAGACACGTCAAAAATG
AAGAATGAAAAAGGACACAAAGTGACAAAAGCAAGTAAAGAACAACATCA
TCAAAAAGAAAAAAAGGTATCTGAAGAAGATAATTTTAATCATCAATCAC
CCAGCGAGCCTGTGGAGGAGAATCAAAAATCAAAGGAGGGGGAGAGCAGT
GCTGAAAACAATGACGGAGGAGATCTACTTGAGGATAACCTCATGAAAAT
GGATAAGAAAAAGTTGGTAAAGCTTTTAGCGAAATTCATGAGAGACAGTA
AGAAAAAAACAGATGATTCGGAGAAAAACCATCAAACACCTGCTGGCGGT
AACGGTGGCGGAATGCAAGCGACCCTTGGCTTACACCCTTTATTGTTAGG
TGCTATGGGAGGCGGTGGTCATAAAGCAAGTGGTGATAAAGGATCACAGT
TTGTCTATATGAATGAATTACCGTCAAAAGCTATCAAAGTTGACCAACCG
AGCGAAGAAGAGTTGACTGAGAAATCTACTTCTAGTAAAGTCGATCATGA
TCCGTATGTTGATATTGGATCCAGTGATCCTACAGATGGTGACAAGGCTG
TGCAGTCACATAATCGACAAAAAGTGACGTCATCTAAAGATGAAAAATCC
GGGGGTAGTGATGATAAAGAAGAAAAAGAGGAGAAGGGCTCAAAGGAAGA
TGAGAAGGAGAAAGAAACAACGGAAGTAGGAAAGGAGAAAAACGATGCAA
AATTTTCCAAAGAGGATTCCAAGGAAGATGGCGGAAAAACAAACGAGGCT
AAAGTAAACGAGTCGAAAGAAGACGATGAGAAGGAAGCGAGCGAGACAAA
AGAAGATACAAAAGTGAGCGAGTCAAAGGAAGATGCAAAGGTTAGCGAGG
CAAAGGAAGATGCCAAGGTTGGCGAGACAAAAGAAGAAGAAANGGGCGTT
TATTTGGAACCTAAGAGTAGCCTTTTACTCTCTTCCCTTAAACTCTATAG
GTACTAGACGCCAGGAGGATAGTATCTATCAAATCGATCCAATGTATTCG
GAAGGCTATGATGTAGACTCCGCTGTCAAAACATACCAAGTCAGTCCAAA
ACTTGTATCTTCTATCAGTCAAGCTATCAAAGGGATGGATGAAGAGGAGA
CTGGAGTCAAGCTTGGAAACGAGGCTGTCTCTATGGAAGCTGAAAAAGGC
GCCATGTTGCCAAGTGAACAACAGAATACAAAGAGTTTCAGTGGAATTCA
ACAACAACAAAATGAAATACATACTAACCCATCTAAACAGTCTCGTTTTG
AAGAGAATGAGAATAAGATGTATGCTAACGAGGCTCCTATACATGGAAAA
GAGGCTGGTGAAGTGAAATTTGTTCAAAAAGAACATGGTAAAGAGTCAGA
AACAAAGGAAAAAGAAAGTGAATCTGAGGACGAGGCTAATAAAAAACACA
ACAAAAAGCAAACCAAATTTCACGAGAAGAAGAAAGAAGAAGAAGACACG
TCAAAAATGAAAAATGAAAAAGGACACAAAGTGACAAAAGCGACAAAAGC
AAGTAAAGAACAACATCATCAAAAAGAAAAAAAGGTATCTGAAGAAGATA
ATTTTAATCATCAATCACCCAGCGAGCCTGTGGAGGAGAATCAAAAATCA
AAGGAGGGGGAGAGCAGTGCTGAAAACAATGACGGAGGAGATCTACTTGA
GGATAACCTCATGAAAATGGATAAGAAAAAGTTGGTAAAGCTTTTAGCGA
AATTCATGAGAGACAGTAAGAAAAAAACAGATGATTCGGAGAAAAACCAT
CAAACACCTGCTGGCGGTAACGGTGGCGGAATGCAAGCGACCCTTGGCTT
ACACCCTTTATTGTTAGGTGCTATGGGAGGCGGTGGTCATAAAGCAAGTG
GTGATAAAGGATCACAGTTTGTCTATATGAATGAATTACCGTCAAAAGCT
ATCAAAGTTGACCAACCGAGCGAAGAAGAGTTGACTGAGAAATCTACTTC
TAGTAAAGTCGATCATGATCCGTATGTTGATATTGGATCCAGTGATCCTA
CAGATGGTGACAAGGCTGTGCAGTCACATAATCGACAAAAAGTGACGTCA
TCTAAAGATGAAAAATCCGGGGGTAGTGATGATAAAGAAGAAAAAGAGGA
GAAGGGCTCAAAGGAAGATGAGAAGGAGAAAGAAACAACGGAAGTAGGAA
AGGAGAAAAACGATGCAAAATTTTCCAAAGAGGATTCCAAGGAAGATGGC
GGAAAAACAAACGAGGCTAAAGTAAACGAGTCGAAAGAAGACGATGAGAA
GGAAGCGAGCGAGACAAAAGAAGATACAAAAGTGAGCGAGTCAAAGGAAG
ATGCAAAGGTTAGCGAGGCAAAGGAAGATGCCAAGGTTGGCGAGACAAAA
GAAGAAGACAAATCAAGCGAATCGAAAGAGGATGACAAGGCAAGCGAGGC
AAAAGAGGATGCGAAAGTAAGCGAGACAGAACAAGATGAGCAGGAAAAAG
CACAACATCTTATTTCAGGTCAAACTTTACTAAAGGATGAAAAGGAAAAA
GAAGAAAGTGAAAAATCAGAAGGAGACGATCAAGTCGTGGCTTCACTTTC
TAAGAGTAAAGAGGAAGACTCAAAAGACGAACACGACCTTGTCAATAAAA
TCATGGAAAAAGAGAAAACGTATACTAGCAAACTAGCCGCTGATATTCAC
CAACATTTATCAAGTGACAGCTCAGACCCTAATAATGAGGATGACAGTGC
TGGAAATAAAGGAGCAGAAAAAAATTCTGAAGCATTGAGCGCTGATGAAG
CGGAGCAACTGAGTTCATCTAAGGACGAAAATATTAAGAAATTGATTCAA
AAAATTAAAGAGAAACTTGAATCAAAGAAAACTAAAAAACATCATGGTCA
AACGGCAAATCATTACGATGATGTTTACGCAGAGATTGGATCGTTTGGTA
AGCGTGACCATGGAATCGTGAAAAAATCATTTAAACGTCATCGCCACGTG
TTTTAAATCGTATCATTGTTTTAAAAAGAACTGTAAACTGTAACTTTTGA
AAGCTATTTTACGGTTTTGAGTATAATGACGCTCCTTCGAATTTTAAGAG
ATCAATTTTGTTCATTTTGGAGGTTAATACTTTGCAAATTGCAATCAAGG
AGATCAAGAAAATGAGCTTATTTGGATTAAGTTTTGTTTTATATGCAATC
AAGGATTCACGGTACTATTTTCCAAGTTTCATAACGCTTGGTTGTGACGC
TAGAGTAATACATGCAAATTTTACTAAAAAACCAAGAAATATGGAAAGAT
TATTGCTTGATACCATGGAACTTGTTTATTACCAAAATATACATAATATA
CATAATTGACATACACAGTTTTCAGAGCAATGGAATGTTATGTTAGCGTA
TAAAATAGTCTGGATCGCAGACCTCTACAAAACCCCATGTAGTATAGGAG
CACGAATCCGTTAGTGGATGCCTGCAGTCTACGTATAACACTGATCAATA
GTCGTTTTGGACGCCTTGAGTCTCTGTACATTCATAACTACACCCCTGTC
TAGCAGCCCTGGTGGAACTTTTTTTCCTCAGTGTGGATAAGAATTCTTAT
TAAAATCCCAGTAAAGATAGAAATTTTATTGTTCCAAGGTTAAAATATCA
AGGGGGGAGATTTTGAAGTGCAATTTTTTACATCGAATGGAGATAAAATC
AAAGTCAATTTC

Coding sequence (CDS) from alignment at scaffold_57:754967..765228-

>TCONS_00070704 ID=TCONS_00070704|Name=TCONS_00070704|organism=Clytia hemisphaerica|type=CDS|length=3111bp|location=Sequence derived from alignment at scaffold_57:754967..765228- (Clytia hemisphaerica)
ATGATACCGATCAACCTTCTGGTAAAGCTCATAACCACCTTCATCATCTT
ACAACATTTCGAGTGCATTAAACACCATGTCAGCAGAAAATCAGTTGAAG
GGCGCCACAAGATACCTACAGTTTCAAAAAACAGTAAAAGTAATCTCCTA
AAAATTGTCAATAAAACTAAAATTGTTAACGAAACACTTTCAAATAAAGA
ATTTAACAATACGAAACGATGGTTAGAGTCTAGTTATTCACGTGGATTTC
ATTCATCCAACAGTCTAGAAGATTCGAGCCTGGATTCCAACTCACTCTAT
GAGTATAAGACAGATTCACGACAGAATTTTCTAACGGGAAATAATGATGA
ATCTTATGGGAGCGATATTGATGCGTTTTTGAAACCAGGAATTGGTGATT
ACCCATCTGACATGGATGGTCTCGATGACTCCTTAAAAATGTACGGCGCT
GAAACATCACATCACCAAACACCCTCCAACACAGCTGCTTTTTCATCAAG
CTCATTGCACTCCACTGGTACATCTTCGCTAGACGACACAATGCTCACAG
ACCTATTAAGTAAAAATATAGAACCGTCAGAAGGAAGCAAAACAGAAAAA
GGGGAAAACCTACAGAAATTCGCTTCCCCGTTAGAGAGTAATTCAAACTC
AGCCTCCATCGTTTCTGACGCAATCAACCAAGATGAGGTCTCCCCCGCAA
AGGTTATTGATAATGCTTTAACGAACATCGAGCAAGAAGCTGCAAAACTT
ATAAAGGAGAGCAAAAATACACATGGCTCGGGGTCTGGGGATACTGAGGA
AACGACGTCATCTTTGACTGTTGATTTATCAAAAACAAAAGGTGAAACGA
AGGAGGGTGATGTGACATCAGCGATGCTTTCCCACTCAGACGATGCAAGT
AAAGCTTTAAAAGAAGCCACCCAGAATGCACCAGAGGATGATTCAGTGAC
ACTTCTTAGTGATTCGAAAGAAGTAGCTTCGGGAAGTGGAGTTGGTGATC
TCTCTTCAGAAACTAACACCAAACAGGGAAAAGAAGTAAAGATCTCCAAA
ATGTTCAAAGCTGAGGAGAAAGACAAACATAAAACAAACGTTAAACATGT
CAAAGGTACTAGACGCCAGGAGGATAGTATCTATCAAATCGATCCAATGT
ATTCGGAAGGCTATGATGTAGACTCCGCTGTCAAAACATACCAAGTCAGT
CCAAAACTTGTATCTTCTATCAGTCAAGCTATCAAAGGGATGGATGAAGA
GGAGACTGGAGTCAAGCTTGGAAACGAGGCTGTCTCTATGGAAGCTGAAA
AAGGCGCCATGTTGCCAAGTGAACAACAGAATACAAAGAGTTTCAATGGA
ATTCAACAACAACAAAATGAAATACATACTAACCCATCTAAACAGTCTCG
TTTTGAAGAGAATGAGAATAAGATGTATGCAAACGAGGCTCCTATACATG
GAAAAGAGGCTGGTGAAGTGAAATTTGTTCAAAAAGAACATGGTAAAGAG
TCAGAAACAAAGGAAAAAGAAAGTGAATCTGAGGACGAGGCTAATAAAAA
ACACAACAAAAAGCAAACCAAATTTCACGAGAAGAAGAAAGAAGAAGAAG
ACACGTCAAAAATGAAAAATGAAAAAGGACACAAAGTGACAAAAGCGACA
AAAGCAAGTAAAGAACAACATCATCAAAAAGAAAAAAAGGTATCTGAAGA
AGATAATTTTAATCATCAATCACCCAGCGAGCCTGTGGAGGAGAATCAAA
AATCAAAGGAGGGGGAGAGCAGTGCTGAAAACAATGACGGAGGAGATCTA
CTTGAGGATAACCTCATGAAAATGGATAAGAAAAAGTTGGTAAAGCTTTT
AGCGAAATTCATGAGAGACAGTAAGAAAAAAACAGATGATTCGGAGAAAA
ACCATCAAACACCTGCTGGCGGTAACGGTGGCGGAATGCAAGCGACCCTT
GGCTTACACCCTTTATTGTTAGGTGCTATGGGAGGCGGTGGTCATAAAGC
AAGTGGTGATAAAGGATCACAGTTTGTCTATATGAATGAATTACCGTCAA
AAGCTATCAAAGTTGACCAACCGAGCGAAGAAGAGTTGACTGAGAAATCT
ACTTCTAGTAAAGTCGATCATGATCCGTATGTTGATATTGGATCCAGTGA
TCCTACAGATGGTGACAAGGCTGTGCAGTCACATAATCGACAAAAAGTGA
CGTCATCTAAAGATGAAAAATCCGGGGGTAGTGATGATAAAGAAGAAAAA
GAGGAGAAGGGCTCAAAGGAAGATGAGAAGGAGAAAGAAACAACGGAAGT
AGGAAAGGAGAAAAACGATGCAAAATTTTCCAAAGAGGATTCCAAGGAAG
ATGGCGGAAAAACAAACGAGGCTAAAGTAAACGAGTCGAAAGAAGACGAT
GAGAAGGAAGCGAGCGAGACAAAAGAAGATACAAAAGTGAGCGAGTCAAA
GGAAGATGCAAAGGTTAGCGAGGCAAAGGAAGATGCCAAGGTTGGCGAGA
CAAAAGAAGAAGACAAATCAAGCGAATCGAAAGAGGATGACAAGGCAAGC
GAGGCAAAAGAGGATGCGAAAGTAAGCGAGACAGAACAAGATGAGCAGGA
AAAAGCACAACATCTTATTTCAGGTCAAACTTTACTAAAGGATGAAAAGG
AAAAAGAAGAAAGTGAAAAATCAGAAGGAGACGATCAAGTCGTGGCTTCA
CTTTCTAAGAGTAAAGAGGAAGACTCAAAAGACGAACACGACCTTGTCAA
TAAAATCATGGAAAAAGAGAAAACGTATACTAGCAAACTAGCCGCTGATA
TTCACCAACATTTATCAAGTGACAGCTCAGACCCTAATAATGAGGATGAC
AGTGCTGGAAATAAAGGAGCAGAAAAAAATTCTGAAGCATTGAGCGCTGA
TGAAGCGGAGCAACTGAGTTCATCTAAGGACGAAAATATTAAGAAATTGA
TTCAAAAAATTAAAGAGAAACTTGAATCAAAGAAAACTAAAAAACATCAT
GGTCAAACGGCAAATCATTACGATGATGTTTACGCAGAGATTGGATCGTT
TGGTAAGCGTGACCATGGAATCGTGAAAAAATCATTTAAACGTCATCGCC
ACGTGTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043984XLOC_043984Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070704-proteinTCONS_00070704-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070704-exon-scaffold_57-1575043694:765140..765228TCONS_00070704-exon-scaffold_57-1575043694:765140..765228Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1575043694:763879..764274TCONS_00070704-exon-scaffold_57-1575043694:763879..764274Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1575043694:761544..762091TCONS_00070704-exon-scaffold_57-1575043694:761544..762091Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1575043694:760556..760645TCONS_00070704-exon-scaffold_57-1575043694:760556..760645Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1575043694:759822..759900TCONS_00070704-exon-scaffold_57-1575043694:759822..759900Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1575043694:758796..759137TCONS_00070704-exon-scaffold_57-1575043694:758796..759137Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1575043694:754967..757336TCONS_00070704-exon-scaffold_57-1575043694:754967..757336Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1510915933:765140..765228TCONS_00070704-exon-scaffold_57-1510915933:765140..765228Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1510915933:763879..764274TCONS_00070704-exon-scaffold_57-1510915933:763879..764274Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1510915933:761544..762091TCONS_00070704-exon-scaffold_57-1510915933:761544..762091Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1510915933:760556..760645TCONS_00070704-exon-scaffold_57-1510915933:760556..760645Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1510915933:759822..759900TCONS_00070704-exon-scaffold_57-1510915933:759822..759900Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1510915933:758796..759137TCONS_00070704-exon-scaffold_57-1510915933:758796..759137Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1510915933:754967..757336TCONS_00070704-exon-scaffold_57-1510915933:754967..757336Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1491911889:765140..765228TCONS_00070704-exon-scaffold_57-1491911889:765140..765228Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1491911889:763879..764274TCONS_00070704-exon-scaffold_57-1491911889:763879..764274Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1491911889:761544..762091TCONS_00070704-exon-scaffold_57-1491911889:761544..762091Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1491911889:760556..760645TCONS_00070704-exon-scaffold_57-1491911889:760556..760645Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1491911889:759822..759900TCONS_00070704-exon-scaffold_57-1491911889:759822..759900Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1491911889:758796..759137TCONS_00070704-exon-scaffold_57-1491911889:758796..759137Clytia hemisphaericaexon
TCONS_00070704-exon-scaffold_57-1491911889:754967..757336TCONS_00070704-exon-scaffold_57-1491911889:754967..757336Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:754967..765228 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.23002e-08	8.12506e-08	2.61213e-08	0.0742506	0.207136	0.502702	2.46499	2.92471	0.302806	0.448213	1.3746	1.12253	3.39344	2.8369	2.21476	7.71043	2.47619	2.72338	0.0653162	0.0580485	1.34983	1.95739	1.56692	2.21403	2.77262	3.26193	0.677011	0	0.0318846	3.38629e-07
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070704 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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