TCONS_00070890 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070890
Unique NameTCONS_00070890
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1457

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070890 ID=TCONS_00070890|Name=TCONS_00070890|organism=Clytia hemisphaerica|type=transcript|length=1457bp
ATGATGTTGAACATCCAGACTGTGATTGACTGCAATAATCTTGTTTGTat
atatAGGGATCTGATTCAAGCAGACCTGAGTTCGACGCAAGACTTGAAGA
CGTTCGCCCCAACCTCCTTTTTCATGGCAACTTGGAATGAAGTTGAATTT
TATaGCAACGCAAAGAGTTCATTCCAAGTAGTGTTGGTGACCAACGGTAC
GTCTACCATCGCCATTATCAAAATCGTGGATATGCAAATCCCATCATGGC
AATTGTTGTTTTACCCTGAGCTGGATGTTCGATATGCATACGACCAAGGG
ACAACATTCAAACGGAGTCGCttcttacaaaaacaaaccaatGGGCCCAA
ATCAGGGACAATACAAACAGCACCTGCTTCCAATGCTTACAGTAACACAA
ACCTCAATGGACGATGGATTATCAACCTTTCAATCGATCCTGACAAACAA
CAAGGAGGAGGGAGCCAAATCAATGCAACATTTGCACCAGTTGTCGATGA
GCGTGTCAAACGTGGTTCTCAGATTGCTGAAGTGGGTGTTGCTGGGAAGT
TTGTTTTCGATAAATTGACCTTGGATGGGAACGTGGTCACACAACCAGGA
GATAATAACGAAATCAGTGTCATCTTGTCCAAGAAAGACAAACGGTTCAA
TACAATGGACACCAACATCATCAACTGGCTATCAACAGTATATGCGAAAG
CCTCAGGAAATGTTTCTCCAGCCAAAGTCACCATCATCGACTACAAACCT
GGAAGTTTGGTGGTGGAGTATTCCGTTGAAATACCGGAAGAAGTCTGCGG
AACAAAATCCAGACCGGAATGCATCAAAACAGTGGAAACAACAGTTACTA
AAGAAGCGAATAATATCACTGAGAGCAACATAGAAGCCACGCTCGATCAA
AAGCGAACTGAATTCACAGATTTGGATGAATGCTCAGTTGATTCTTCGCG
GGGtgacaaacttttttgtgaTCAAAATGCGTACTGTTACAATTTCCCTG
GTGAAGGATCGTATGCTTGTATCTGCAAAGATGGCTACGAAGGATCTGGT
AGAGTTGGACAGTGCAATCTTATAAAGGATACAGCAAAAAAGACGATCGG
TATTATAGCCGGGGTGATCATCGCTCTTCTTCTCCTCATCTTTGTCTTCG
TTTTCGTCATCAAACGCGAGCAGAATGAACGCTTGCGCGAGAAACAAATC
GAAGCAGAGCGCATTATCCCGCGTGACATGAGACCGAGGAAAAGCATGAT
GAAACCTAAAGACAGGTCAACGAGGCGGGTCTTGGTTCGAGCTGGTGAAT
TTGGTTCTGACTTCGACGTTTATCATCGCACGTAACATATcataaaatga
aataatatTAATTTTTAAATCGTAAGAACTTGCTATATTTTAAGAAGAGC
AGTTTTGGAATTATTTCTTCTACCCTTTTTTCTGCAGCCCTTATTATTAT
ATTTCGA
Run BLAST on NCBI

protein sequence of TCONS_00070890-protein

>TCONS_00070890-protein ID=TCONS_00070890-protein|Name=TCONS_00070890-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MMLNIQTVIDCNNLVCIYRDLIQADLSSTQDLKTFAPTSFFMATWNEVEF
YSNAKSSFQVVLVTNGTSTIAIIKIVDMQIPSWQLLFYPELDVRYAYDQG
TTFKRSRFLQKQTNGPKSGTIQTAPASNAYSNTNLNGRWIINLSIDPDKQ
QGGGSQINATFAPVVDERVKRGSQIAEVGVAGKFVFDKLTLDGNVVTQPG
DNNEISVILSKKDKRFNTMDTNIINWLSTVYAKASGNVSPAKVTIIDYKP
GSLVVEYSVEIPEEVCGTKSRPECIKTVETTVTKEANNITESNIEATLDQ
KRTEFTDLDECSVDSSRGDKLFCDQNAYCYNFPGEGSYACICKDGYEGSG
RVGQCNLIKDTAKKTIGIIAGVIIALLLLIFVFVFVIKREQNERLREKQI
EAERIIPRDMRPRKSMMKPKDRSTRRVLVRAGEFGSDFDVYHRT
Run BLAST on NCBI

transcript from alignment at scaffold_58:1423371..1437409+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070890 ID=TCONS_00070890|Name=TCONS_00070890|organism=Clytia hemisphaerica|type=transcript|length=14039bp|location=Sequence derived from alignment at scaffold_58:1423371..1437409+ (Clytia hemisphaerica)
ATGATGTTGAACATCCAGACTGTGATTGACTGCAATAATCTTGTTTGTat
atatgtaatttttttatgaatttcagAATTAAGTtctacaaaaacaaaga
atCCATTAGCATTATATAATTTTCAAGCCAGCACATTATAATGAGGTTTC
TGCAACCTCTTACTTGAAGCATGACCTTTGTTTGATGTGTTTGTACCCTT
CATGTGTATCCTGTTGATATCGAGCCTATCAGTCCTCAGGTTGATTTTAT
AAAGATAATGTCCAATGTTCAACCAggccaaaaccaaaacaaagccaagt
gagcaactatcaaaagaaatctcctGATGGTCAACGTCCTGGTTGTTGGG
GTTTCGATTATTTATTTACTGTTCTTTTTCTCCATAGCTTTTTTCTTGAA
ACTGGTAAAATTCCAGATAAAAAATCCAGCATATCTTCTCTGTGACTTCT
TTTCAATGCTTGTTTATGCTTGTTCACAACAAGCAAGCCAAAGCAACCGG
TCGAATTCCCAAGTTTCTTATGACATAAATCTAAAATCAGGACTCACTAA
AACTGAAAATGTTATGAAACAGAACAAGGCTATTTTTCGAGTCTTGCTTT
TAGATCTTTAGTGcctaatttcttcaaaaatcccGGGAAGCATGCAAATC
GACCTCGATGGACTTACTTTTGCAAAAGTTTGCATGTTGCATGGTACTCA
AACTGTTAGTAccacaaaattaaaaacaaagactCGAATTCACAGACCCG
CTAACTTTTCGGCAAAAactttaagtcagtaaaataaatctcAAAACCCT
AAGGAATGATGATCAAATACCGTAAAGCTTGACTCCGGATAAAAACACAG
GTGGAGTATATTACTTAACGCTCTATCTgcactaaaaaaaaaaattctat
aaagCATCGAATACATTTTCCGCCCCCAATCTTTATTCACTCTATGGTTA
GCTTACCATGCAGTCGTGAGTTAtgcaggggtgtcgcaccgccccTGTTT
TTGGCCATCGataccttatgttcttatatagtttgttctgtAAAAAAAGA
CTTGTATTAAATTATCAAAGAAGTGAAGATTGAGCACgaattaaaacaat
tttgccCTAGAATTAAGAAGCAAGATGATAACAAATTGAGGCTTAAAGtg
ctaagaaaaaagaaaagacgatactcaacaaaattttactggatcttata
aaaaaagtgtataggGGCATATCAGTGCTTCCTTTGATTTTTCACTTTAT
AATGTTTTGAGAGTTGTTTTCTTTCTAATACACAGAGGGATCTGATTCAA
GCAGACCTGAGTTCGACGCAAGACTTGAAGACGTTCGCCCCAACCTCCTT
TTTCATGGCAACTTGGAATGAAGTTGAATTTTATGTAAGTTTCTTGATGT
AGTCAGTATTTTATGCGACTGTCAAAATATTGATGGACTTGTTCAAATAT
CTCGTAAGTCTCTCCGTCTTGCTTCTGTAATAACTGGACGCGTTGAATCA
TAAATGCTGTATGTATATATGCTCTTAAAATTTTAGTCTGAAATATTTAG
TCcagaaaatataaacatttgCGTCATTTGAGTCttttttccagaatttt
ttGAGTATGTATGCCTCTTCCTTATGTTTTCAATCTTAACTGGGATTTTT
TCACTGTATTTTTGTCTGGCAATTTTAAGCAGCCTCAAGcataatattta
aatttttctttcaacagaGCAACGCAAAGAGTTCATTCCAAGTAGTGTTG
GTGACCAACGGTACGTCTACCATCGCCATTATCAAAATCGTGGATATGCA
AATCCCATCATGGCAATTGTTGTTTTACCCTGAGGTAGTTTTCACTTATT
CTATTAGAACGTCTTGATTCGGTCCGAGCTCGGATGTGCtaattttgagc
ctaaaaagTTCTTATTGACGTTCTTGACGTTCTCGATGTACAAAATTACC
TAGGGTTATAAAAATTGACCCTCAGGTTGAACAAATCTGCTCTAATTTAA
ACTGCACAAATACGAAATTTCCTTATTAATTAGataattttaagcaaatt
tcttcaATCTCTTTAATTCTCAGACTGGTCatattcttacgatgttctta
tcCCCCCCAATTTACAGCCTAAATGTTCTCATAAACTGGGTTCTGATACA
AAAAGTTTATTGGCATACACGCATTCTTCCAATCCTGTCTATTTCCCATT
TGGAGAATATTTTATTTAATAATGAGGCCGGCGTTCCAATAAACATGATA
ATCATTGTCTTTCTTCTTNCCCATTTGGAGAATATTTTATTTAGTAATGA
GGCCGGCGTTCCAATAAACATGATAATCATTGTCTTTCTTCTTTCACTCA
GCTGGATGTTCGATATGCATACGACCAAGGGACAACATTCAAACGGAGTC
GCttcttacaaaaacaaaccaatGGGCCCAAATCAGGGACAATACAAACA
GCACCTGCTTCCAATGCTTACAGTAACACAAACCTCAATGGACGATGGAT
TATCAACCTTTCAATCGATCCTGACAGTAAGTCTTTGCTCATTTGTTTTA
TGGTTTAAAAGTATACTTTTGTTAGTAGGCTCAATcatagcccggggtcc
acttaaagctaattttatagactggatggcgcgattaagtggcccggtag
tatatggtaatatgcctTTGCTTagaacagtccgccagattttagttgat
tttggaaggtaaaaacgttatgaagcaatgtttttatttgggaATAAGGG
ATttcaaatctgttattgatgtttgtttctcatttttgattaactccaaa
tagttttattgttatttggatttttaagattttctctcaaaatgNaatta
tatctttcaactccaagtagttttattgttatttggatttttaagatttt
ctctcaaaatggcgacatgccaaacgctcctagtctacttcactggactc
agcgtcataaaaaaattatcaaaaagcaaagttcagccaaaagtagactc
tagtctagctCAATCACAGCTTTAACTTTTATGAACGCTTTGTTTCCTTT
CCTTGCAAACCTATGAATCTTTGGTCCATAAAAAACGAGATGAGAAACGA
GACTTTACAGTTAAGCGATATCATATTATCATGATTATGTTTCTAAGAAA
TATTGATGAGCCCAAATCTGCTTTAAAAGCCAAGTAttatacagcacctg
accccaagaatgtagtaaaccctgagaatgtaggtttctcattttttaac
attgtagccctaacgatagttcaacttcataaaaagttgtttcagagcat
actgttacaatgctggacaaaaggttgtagacaaaatgaaatttcagtga
aaaatgatgagaaatagagcaaaatgactcttcaatgtgtctgaaagggg
atggaagttaagaaaaagaCTTTCGAAGTCGTTgtattgcttttgaattg
cttttgagggaaccgcaagcaaaaaatcagcgttttgatactggtgtaag
ccagttaataaAGCCCTATTATGGTTAGCCCTtttggttagactgcagtg
ggtgactttgaaagacctTGAACAGctttaggctgctggcatccactaac
agattcgtgctccttatagaggatgcttaataagctatatttcctttgtc
cagagatttgccgcttttagccgatatacggctaaagacatttttagctg
gcgagtgtctacaaatataacattacgtaatgtttaaattttatgtgagg
caccaaatcatagattggaaaatatatttggatttcgaaaaaaaagtagg
cggaaggaagtttgcttgtttttcttcctcctttcttgtttaaTGTGGAG
ATTTTGTAAAAGATGAGAAATTAGATTTATTGAATTTAAGTGCCgtgatg
tatcttctgtgtgcaccaacaaaattttgcttcataaaatgtataaaact
acattttgatacttgaatttggacttgtatgagtgtataattttttacca
cactggattcgttgatcactttggctccagataattgttttgtcagttct
acagatatgttgcagattatttcaaggtattctagttatgtatttacagt
acattttgggggtcatactgaatatttctgacattagttctttatgattc
tacaaaatgtagtgttgttgtttcttcaacaagggcctttaaatgttaaa
acaaacaaagaacttttcttcagctttggcatttcactttttaataatac
tgtggcctttgtatctttttaggtacttagcttcaattctttgaaaagat
tggagtgtttctggttgttttctttcacttttgtgtccataccttattgg
tatatattttcgcgtgttacaaattttcgcgggtacttaatttggcgagt
tttttggtcaattttcgcgaaatttaatactgtttaaatttttcaaaatt
acaaaatcgcgaaattaaatacactggtttaaaatatttcgctctctctt
agagcatcttcagtttttttgaataacaaagaCGTTTAACAATTATATTT
AACGACGCTAGAACGGCATTACAATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCTTCTTCGTCAAAACTTCAACATCGTCAAAAACGACATCACC
TTATCGACCGTCTTCCCTTCAACTCCAACAGTCGCCTTCCGCCGCCGAAA
AACAATCTTGGAAAAACCACCACGTCAAAACACCACGAAACCGTGTGGTA
AATGCAAGCTATGCCCGAACATTGTCACCCAGTCTGAAATCACTCACAAT
GGTATCACTAAACGTGTAACCAATGGTGGTAGCTGCAAAACGAAGAACGT
TGTGTATGCAGCCAGATGCAAGATCCATGACAAGTTGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcaaa
aaaactgaagatgctctaagagagagcgaaatattttaaaccagtatgtt
tttattctgaaattaaatacacgcgaaaaacttttcttagtatttttttA
GTATctttacatcaaaaacgttgtgtttcaagcaaaatcagtcttttttt
tgctttatattcccactttctgaaaatacctagtttagtgaatcgcgaaa
tttaatacacgcgaaacacgttttttcagaaaaaattttgcgaaacacgc
gaaaatatataccaataaggtatttgtattttttgagcttcgaccgaaga
gctgatggaaaagttttgataaatttacagaccagatatcttataaaagc
aaaagtcaaaaataaatctacagactgtacataatgcgcgcatcagattg
ttttttatattttttctgttttgtttttctggtctgggattcgaatttcg
aatgtaaacattccattgaaaacattcgaaacgatcgtttttacGTACAC
ATCAATgccaatcaaattattaactcgccaagatttcctttgcgaaccgg
aaagcgcttggtagatcattaagcagacctatacttcctggggttttgta
gaggtctgcgattcagactagaacagctttggatgggtttggaaagcacc
cagagcctcttgggaacttgtttttgatcgatattgaagaattttgcaaa
tattgcagaagtctacaaaccttttgtccagcattgtacaTCTTACTGAT
TATTTGTGGACATATAATTTTaacttaaattaattttttccaacgaaaat
tttaatggaagttgattggatactacccgaattgagacatttttaaaata
agtcctctctaaatcgaaatctattggagttaagttatgatgatagggta
ttttcttagtcctaatgaactaaggaaatgggaaaaataaattgttctaa
gttagatattttgacgaaaatgtttgacctaactTTTGGGattagttgac
ctacaatttgggggcctttataacccgacataaaaagtctgccaaattat
ataaaacttgtttgttgtactttcataacatgaaagtactacctgagaga
tgattaatgttgacattttgagcttttacggCGTGTCCCAGACCCAatgg
gaccccagcccaatcagaaaatttgcctaattttggaacaatagaatttc
tatcccaatttggacttaagtagaaatttttggacccgcattgggaaaaa
gttccaccggggctgtgaggcaggggtgtNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttcaacctac
aaaataaaaacaactttcttgtctcttgatttcgtcctttcttttacttt
ccctcatttgtagcacgataaaattaatatctttgttaattttttaccag
agtatatttctaaagtatgaatttcacttagagaacaataatttccgatg
aataTCGAATTTCCATTCTCAACAACCGTATCTTTTTACCTACATTCTGA
GGgttaaaaagggaaaaaaatccaatttttagaataacacaaagctcttt
agaatattgttttggcataaaatatttctaaaatttgctgttagagttaa
tccaattgaaaaaatatcaacattttactattactagatataaagccata
aaaccaaacctacattatgggggctataacgaaaatgggagtcaacttca
aagACCAAATAAATTGGGCTATctatcaaaaataatgaaactaacccctg
ggaaaggattttgggagttcaaaatttcgttgaaaacattcaatgttttc
taaaatgcaaatctacatctttcaggtatgattcaaatttcacctacatt
ctcggggtcacgTGCTGTAAGGAACGGAGGAAGATGGTATCTAAGGTCAA
TATATATTTTCTCCACTCTTCTTTTACAGAACAACAAGGAGGAGGGAGCC
AAATCAATGCAAGTAAGGAGATAATTTTTTGTTCTTCTTCAAACTATTAA
CTATTCTATTCtaacactacacgttttttttttataacaacaaactatat
aagaacataaggcttcgaggctcaaaaatttaagaacattctaagaacat
tctaaggctttggagacttaaaaacatgcattttcttaagaaattacatc
aaaatgctcaaaaaatgctgaaaataagaacattttaagaacatttttgg
cttcaaatccaaaaaactaagaacatccgaaggcttcgaaaatttttgac
gttcttataaaaaaaaacgtgtattctacTAATGTATGTTTTTACTAAAT
GTGCCAAAAATAGCGTGTGcgcagtgtttttatttttgaccatAACATAT
TTTCGACtcgtttgtttttcaaaattctttcaagaaaatgaagaaaaact
gaaaagaaaaaaatgaccatTTCGTAAAATAGCGCTATAATTACACAAGA
ATGAAACTTCAATATTATGTCAGTAACATagtgaaaaaattctaaaaatg
ttaatccaatcaaaagatttcaaacaaAGTGTTCAACTGATTGACCCCTA
AAATGCGTGTTTTAACAACCTTTACCTCAACCAGACTTGAAAAGACTTTG
GCGTAACCACGaattcattttcactttttcaactTCTTTCAACTAATTTT
CTCATTTTAGCATTTGCACCAGTTGTCGATGAGCGTGTCAAACGTGGTTC
TCAGATTGGTGAGTGGAAGTTTTCGTTTGGAAAAAAGAGGGACTTCCGAG
GGTACAATATACTGGATGCCGGTCATTTTTGCGTCAAATAACGAATCACC
GGCCAATACGGGATTCCtgaagcccccccccccgaaaaacACATTTGCGA
GACGTTACCAATATCTTTGATTGAAATGATGGAACCAGAGATCCTTACTG
AATTTAGCATTCCAGACAGTGAAATAGATTCATTCCCTTTATGACGAAAA
TATAGGAAGCTCATGGGTTCATTGTGTGATGTCTTGAGAAAACACAAAGA
GCATTCCCTCGTATACGTCGGGTTTAcgttaaaaaatctcaaaagatttt
gacaatttcgaatttttcaaccattgCCCTCAATTTTTAGCTGAAGTGGG
TGTTGCTGGGAAGTTTGTTTTCGATAAATTGACCTTGGATGGGAACGTGG
TCACACAACCAGGAGATAATAACGAAATCAGTGTCATCTTGTCCAAGAAA
GACAAACGGTTCAATACAATGGACACCAACATCATCAACTGGGTAATTCG
CATCCTCGTTCTTGTTGTTTCTGAAAAACACAAGTTcttctcttgatttt
ttttcttcaagccACTAAATCATGattcaaacaaataaacaacaccaaaa
ttttgattttattataacTCATCAGTAGGTTAAAACCAACATAAATCAGG
TTTTAACCCGATGATGAGTTAGTAAAGACTCGAACAGCATTGTTTAAAAT
GTTGGTGTTGTTTATTTCTTCTCTTGATTTCATCCCTCCAGTTCATAAAG
TCCAAAACACCCGCTGAAATTGATGCAAACAGATACAGATATTATTTGAA
CAACTCTAACAAATACACatgcaatttttttaaatattttgaaattgact
TTAGTATAGCCTGCTTTGAACCATTTCTCCATTAACTTTCTACATTGTAg
gtaaattacacgctttttttatataagaatgttattttttcaattcatca
agaatattcttaacttttttggggaaaatcatcttgAAACTCACTTAcca
taattttaatttttaggtcaatttgtactagtaatctcatggttataagg
gaaattcgggataaatttcccgaggtcaattttgaaattttttgaaattt
cccgagtgcaacgaggAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaatttaaaacatttcg
aaatttgaccgagggtaatttatccagaattttacgaaaacaagcatggg
attcctggttaatctcatggtttggattgaaattctaacgattctgaaag
acgtcaatttaacactggaaatcaatctgaaaatttaaaaagaggtctca
aaaaagtcatagaaacgcgaatcgagttttaattggatagtattccattt
acttaaactttgaagttagtaagaaagccgaaaaaggtgatgaatttcca
aacgatgaaaatttcacttttgcgggaaattacaaaagctaggagggaaa
ttataagttcgcgggaaattacaaattaacgtaagcaaaaacgtcaatcg
aatttcaatcaaccatgagattacatcataaatgttcttataaagtatat
tgtTATAAAAACTTTTATAAGTCACTTTTAATTTTGAGGTCATCCTAATA
TCAAATGTAGTGCAAACCTGTGAAAGTAAATAATTCAGCATATTAGTCAA
AAGCTGCTAGGTGGAGAATTGAATGCTTGATATTAATAGATGAACACTCA
ATCTAGCCTAGAAATCAAGGCTAGTTTGATTCGGTaactaggataaatct
gatggtatgtaagttgtgactgaataacagtattccaaggcaaactatct
tgaatccgtaaatataaaaatcttgtaaagcgccgaaaacgctatattgc
cataacCGGGTGCCCTAGCCTTGCGAacacgggcttagttaactaggcta
caCTCAGTCTAGCGCTTTCATTTCAACTTCGATTATCATTTTCAGCTATC
AACAGTATATGCGAAAGCCTCAGGAAATGTTTCTCCAGCCAAAGTCACCA
TCATCGACTACAAGTGAGATCATCTTTTTCATTGATATCTgttacttttc
aaaatttttgagagTCCCCATACACTTATCAACCAATTAGGTGCCATCgc
tttaaattttaaatatctTTCGATTTCAAATGCGCGTACACGCCCCAAGT
AAGCAAAAAATAACAATCTCGATTTGTCTCTTATTCGGGCAGCGTCAAAA
ACAAGGGTCATGGCACTCCCACGTTCAGACCTACCAGTTGAAAAGTTGAG
CGATCTCATATGAAGTCAGCAGCACTTAATGGGTTAGCAAGTAGGTATTT
GTGGATCCTTCAGACTTTCTGAAGGTCAATTGTAATTACAAAGTAACCGA
TGTGAAAATTATTGCgattatttttggtgttttaatGGAAATAAGAAGTC
TTTTTCTGTTCTCTGAAATTTGGAAAACTCTCTTTTCGTTCAGACCTGGA
AGTTTGGTGGTGGAGTATTCCGTTGAAATACCGGAAGAAGTCTGCGGAAC
AAAATCCAGACCGGAATGCATCAAAACAGTGGAAACAACAGTTACTAAAG
AAGCGAATAATATCACTGAGAGCAACATAGAAGCCACGCTCGATCAAAAG
CGAACTGAATTCACAGGTACAAAAGAGtaactcaaacctctataacgcga
atgtctccttaactcgaaaaagttctcaacttcagttgagttagaatctg
agaatgtgtgtctgtgtgtgtgtctgtgtgtctgtgtgtatgtcccaaaa
ctttggggcagcctggagacttcaaaaattgttcgatttggctgaaattt
ggcacacttgttggttgggtgaatatctgggggtgtttttttcatttttc
aaaaattttgatttttggggcctggggacgagttttcgccaaaattttgg
ggcagcctggagacttcaaaaattgttcgatttggctaaaattttgcaca
cttgttccttgggtgaatatctgggggtgttttttacANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNctttttcattttttgaaaattttgatt
tttggggcctggggacgagtttttcaccaaaacgaggctaaaactttggg
gcagcctggagacttcaaaaattgttcgatttggctaaaattttgcagac
ttgttccttgggtgaatatctgggggtgctttttgcatttttcaaaaatt
tagatttttggggcctagggacgagttttttgccaaaacgaggctaaagc
tttgaagcagcctacaggcctccaaaatggtcggatttggttgaaattta
gcacacttgttcattgggtaaatatctgggggtccacaattgggcctatg
aataatttgaagccactgaagttgagcccagtgcgttgcgcacgttcgac
tattttacagtcctttcagttaacaatgccttataaaccttactccataa
cttgaaATTCCCTTAACTGGTCAAGGTTATCTGTGTGCAGGTTTAAATTA
TGGAGACTCGactgtagactggagtcgtttataatgcgtgtaatacagta
gtataggcgttatatgataatgcGTCATGTGTTTTTGAGATCTGGATTTT
TCAGGGCTTCGTTGAGCGAAACATTTTTCTGACAATACAaattcaattca
tgatatgaaccattgcaatgtcttctatggacccaacagctgattggttg
aaagtgacgtattgactgattttacttcatttacaaccaatcagttattg
ggtccgtgatgtaatgtcagaagacattgcaatggtgcatatcatgaata
cagtcAAAGCTAACCAGTAGTCCTTCTTGATATCATAATATTAACAATGA
TACTGGCGATCTATTGACTATTCATCTTTCTGTTTAGATTTGGATGAATG
CTCAGTTGATTCTTCGCGGGGtgacaaacttttttgtgaTCAAAATGCGT
ACTGTTACAATTTCCCTGGTGAAGGATCGTATGCTTGTATCTGCAAAGAT
GGCTACGAAGGATCTGGTAGAGTTGGACAGTGCAATCTTATAAAGGATAC
AGGTATGATAGTGTCATAAAATCCCTATTCTTTTTACTCACCGTGGAATC
GTAGATTATGATAAGATCTACCTCTCTTAAACACTTTTAGAATTTGTTTT
GTTCTTACCGACAGGGTGTCAAACATGTATTTATACGTTTCTGATTTTCA
GTAGGATTTTTGTATGGTGTTTCTTTTAGTGCCCCCGATAAGTATATCTA
CTTTTCCCTCATAGCAAAAAAGACGATCGGTATTATAGCCGGGGTGATCA
TCGCTCTTCTTCTCCTCATCTTTGTCTTCGTTTTCGTCATCAAACGCGAG
CAGAATGAACGCTTGCGCGAGAAACAAATCGAAGCAGAGCGCATTATCCC
GCGTGACATGAGACCGAGGAAAAGCATGATGAAACCTAAAGACAGGTAAT
CAGCTTGATTTTATTTATCATATTATAAAAGGAGATTCAGCTCTTATTTT
GGTTAGCTTTTCACGAAACCAATCATCGAGAAATTTCTCACTGGAAAAAT
GTTTGTTGATGTATAAATGTTTGAGTCCATTCGCTTTAATAAGTGTACAC
TCTGTTTTGCTAATCATGAAAAAAACCATTGGTTTCTCTATAAATGCTAC
CGATCATTTAGCCGACGAAAATCCCAACCTTTCTTTAGCCTGGTGTTAGG
CAGGGTGAGCATTTCTCTCAATAgcttgtttgcttttttttgttTAGGTC
AACGAGGCGGGTCTTGGTTCGAGCTGGTGAATTTGGTTCTGACTTCGACG
TTTATCATCGCACGTAACATATcataaaatgaaataatatTAATTTTTAA
ATCGTAAGAACTTGCTATATTTTAAGAAGAGCAGTTTTGGAATTATTTCT
TCTACCCTTTTTTCTGCAGCCCTTATTATTATATTTCGA

Coding sequence (CDS) from alignment at scaffold_58:1423371..1437409+

>TCONS_00070890 ID=TCONS_00070890|Name=TCONS_00070890|organism=Clytia hemisphaerica|type=CDS|length=1335bp|location=Sequence derived from alignment at scaffold_58:1423371..1437409+ (Clytia hemisphaerica)
ATGATGTTGAACATCCAGACTGTGATTGACTGCAATAATCTTGTTTGTat
atatAGGGATCTGATTCAAGCAGACCTGAGTTCGACGCAAGACTTGAAGA
CGTTCGCCCCAACCTCCTTTTTCATGGCAACTTGGAATGAAGTTGAATTT
TATaGCAACGCAAAGAGTTCATTCCAAGTAGTGTTGGTGACCAACGGTAC
GTCTACCATCGCCATTATCAAAATCGTGGATATGCAAATCCCATCATGGC
AATTGTTGTTTTACCCTGAGCTGGATGTTCGATATGCATACGACCAAGGG
ACAACATTCAAACGGAGTCGCttcttacaaaaacaaaccaatGGGCCCAA
ATCAGGGACAATACAAACAGCACCTGCTTCCAATGCTTACAGTAACACAA
ACCTCAATGGACGATGGATTATCAACCTTTCAATCGATCCTGACAAACAA
CAAGGAGGAGGGAGCCAAATCAATGCAACATTTGCACCAGTTGTCGATGA
GCGTGTCAAACGTGGTTCTCAGATTGCTGAAGTGGGTGTTGCTGGGAAGT
TTGTTTTCGATAAATTGACCTTGGATGGGAACGTGGTCACACAACCAGGA
GATAATAACGAAATCAGTGTCATCTTGTCCAAGAAAGACAAACGGTTCAA
TACAATGGACACCAACATCATCAACTGGCTATCAACAGTATATGCGAAAG
CCTCAGGAAATGTTTCTCCAGCCAAAGTCACCATCATCGACTACAAACCT
GGAAGTTTGGTGGTGGAGTATTCCGTTGAAATACCGGAAGAAGTCTGCGG
AACAAAATCCAGACCGGAATGCATCAAAACAGTGGAAACAACAGTTACTA
AAGAAGCGAATAATATCACTGAGAGCAACATAGAAGCCACGCTCGATCAA
AAGCGAACTGAATTCACAGATTTGGATGAATGCTCAGTTGATTCTTCGCG
GGGtgacaaacttttttgtgaTCAAAATGCGTACTGTTACAATTTCCCTG
GTGAAGGATCGTATGCTTGTATCTGCAAAGATGGCTACGAAGGATCTGGT
AGAGTTGGACAGTGCAATCTTATAAAGGATACAGCAAAAAAGACGATCGG
TATTATAGCCGGGGTGATCATCGCTCTTCTTCTCCTCATCTTTGTCTTCG
TTTTCGTCATCAAACGCGAGCAGAATGAACGCTTGCGCGAGAAACAAATC
GAAGCAGAGCGCATTATCCCGCGTGACATGAGACCGAGGAAAAGCATGAT
GAAACCTAAAGACAGGTCAACGAGGCGGGTCTTGGTTCGAGCTGGTGAAT
TTGGTTCTGACTTCGACGTTTATCATCGCACGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044082XLOC_044082Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070890-exon-scaffold_58-1491911889:1423371..1423424TCONS_00070890-exon-scaffold_58-1491911889:1423371..1423424Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1423371..1423424TCONS_00070890-exon-scaffold_58-1510915933:1423371..1423424Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1423371..1423424TCONS_00070890-exon-scaffold_58-1575043694:1423371..1423424Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1424656..1424754TCONS_00070890-exon-scaffold_58-1491911889:1424656..1424754Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1424656..1424754TCONS_00070890-exon-scaffold_58-1510915933:1424656..1424754Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1424656..1424754TCONS_00070890-exon-scaffold_58-1575043694:1424656..1424754Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1425088..1425204TCONS_00070890-exon-scaffold_58-1491911889:1425088..1425204Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1425088..1425204TCONS_00070890-exon-scaffold_58-1510915933:1425088..1425204Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1425088..1425204TCONS_00070890-exon-scaffold_58-1575043694:1425088..1425204Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1425722..1425896TCONS_00070890-exon-scaffold_58-1491911889:1425722..1425896Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1425722..1425896TCONS_00070890-exon-scaffold_58-1510915933:1425722..1425896Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1425722..1425896TCONS_00070890-exon-scaffold_58-1575043694:1425722..1425896Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1431350..1431382TCONS_00070890-exon-scaffold_58-1491911889:1431350..1431382Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1431350..1431382TCONS_00070890-exon-scaffold_58-1510915933:1431350..1431382Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1431350..1431382TCONS_00070890-exon-scaffold_58-1575043694:1431350..1431382Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1432081..1432128TCONS_00070890-exon-scaffold_58-1491911889:1432081..1432128Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1432081..1432128TCONS_00070890-exon-scaffold_58-1510915933:1432081..1432128Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1432081..1432128TCONS_00070890-exon-scaffold_58-1575043694:1432081..1432128Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1432511..1432662TCONS_00070890-exon-scaffold_58-1491911889:1432511..1432662Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1432511..1432662TCONS_00070890-exon-scaffold_58-1510915933:1432511..1432662Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1432511..1432662TCONS_00070890-exon-scaffold_58-1575043694:1432511..1432662Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1434166..1434233TCONS_00070890-exon-scaffold_58-1491911889:1434166..1434233Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1434166..1434233TCONS_00070890-exon-scaffold_58-1510915933:1434166..1434233Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1434166..1434233TCONS_00070890-exon-scaffold_58-1575043694:1434166..1434233Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1434664..1434836TCONS_00070890-exon-scaffold_58-1491911889:1434664..1434836Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1434664..1434836TCONS_00070890-exon-scaffold_58-1510915933:1434664..1434836Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1434664..1434836TCONS_00070890-exon-scaffold_58-1575043694:1434664..1434836Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1436358..1436522TCONS_00070890-exon-scaffold_58-1491911889:1436358..1436522Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1436358..1436522TCONS_00070890-exon-scaffold_58-1510915933:1436358..1436522Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1436358..1436522TCONS_00070890-exon-scaffold_58-1575043694:1436358..1436522Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1436735..1436915TCONS_00070890-exon-scaffold_58-1491911889:1436735..1436915Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1436735..1436915TCONS_00070890-exon-scaffold_58-1510915933:1436735..1436915Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1436735..1436915TCONS_00070890-exon-scaffold_58-1575043694:1436735..1436915Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1491911889:1437218..1437409TCONS_00070890-exon-scaffold_58-1491911889:1437218..1437409Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1510915933:1437218..1437409TCONS_00070890-exon-scaffold_58-1510915933:1437218..1437409Clytia hemisphaericaexon
TCONS_00070890-exon-scaffold_58-1575043694:1437218..1437409TCONS_00070890-exon-scaffold_58-1575043694:1437218..1437409Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070890-proteinTCONS_00070890-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1423371..1437409 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.795975	0.831644	0.643745	0.346392	8.28064	4.66526	2.66802	2.25826	1.96435	2.52218	3.16812	2.46125	59.6685	69.6041	1.32366	1.19529	2.66757	2.97478	135.05	192.042	2.58364	2.17185	1.69492	1.30386	1.95338	1.33475	0.89654	0.87361	0.473288	0.450058
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR013032EGF-like_CS
IPR000742EGF-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070890 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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