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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071047 ID=TCONS_00071047|Name=TCONS_00071047|organism=Clytia hemisphaerica|type=transcript|length=3532bp
CATCAACTGCTGTAGCAGGAACTACTGAAGCTCCATCTGAGACTACTCCA
GGAGAAACCACTCAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATC
AACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAAACTACTCCAGGAG
AAACAACTCAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACT
GCTGTAGCAGGAACAACTGAAGCTCCATCTGAGACTACTCTAGGAGAAAC
AACTCAAGGACCACTTGCCAGTACTGAAGGTAAAGGACCATCAACTGCTG
TAGCAGGAACTACTGAAGCTCCATCTGAAACTACTCCAGGAGAAACAACT
CAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGC
AGGAACAACTGAAGCTCCATCTGAAACTACTCTAGGAGAAACAACTCAAG
GACCACTTGCCAGTACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGA
ACTACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACC
ACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGAACTA
CTGAAGCTCCAGTAGAAACAACTCAAGGACCACTTGTCAGCACTGATGGT
AAAGGACCATCCACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAGAC
TACTCCAGGAGAAACAACTCAAGGACCACTTGTCAGCACTGAAGGTAAAG
GACCATCAACTGCTGTAGCAGGAACTACTGAAGCTCCAGTAGAAACAACT
CAAGGACCACTTGTCAGCACTGATGGTAAAGGACCATCCACTGCTGTAGC
AGGAACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAG
GACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGA
ACTACTGAAGCTCCAGTAGAAACAACTCAAGGACCACTTGTCAGCACTGA
AGGTAAAGGACCATCAACTGCTGTAGCAGGAACAACTGAAGCTCCATCTG
AGACTACTCCAGGAGAAACAACTCAAGGACCACTTGTCAGCACTGACGGT
AAACGACCATCCACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAGAC
TACTCCCGGAGAAACAACTCAAGGACCACTTGTCAGTACTGAAGGTAAAC
GACCATCCACTGCTGTAGCAGGAACTACTGAAGCTCCAGGAGAAACAACT
CAAGGACCATTTGTCAGCACTGAAGGTAAAGGACCAACAACTGCTGTAGC
AGGAACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAG
GACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGA
ACTACTGAAGCTCCATCTGAGACTACTCCAGGAGAAATTACTCAAGGACC
ACTTGTCAGTACTGAAGGTAAAGGACCATCAACTGCTGTGGCAGGAACTA
CTGAAGCTCCATCTGAGACTACTCCAGGAGAAACTACTCAAGGACCACTT
GTCAGCACTGAAGGTAAAGGACCATCCACTGCTGTAGCAGGAACTACTGA
AGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCATTTGTCA
GCACTGACGGTAAAGGACCATCAACTGCTGTAGCAGGAACTACTGAAGCA
CCAGGAGAACTAACTCAAGGACCATTTGTCAGTACTGAAGGTAAAGGACC
AACAACTGAAGGTGCACTCATCCAAAGATCCTCTTCACTTTCTCCAAAAC
AAACGACTGACCGAATTAGCGTGACCATTGCACCAACAGCAGATGTGCTG
AATTTCGTCGAAGACTGTCCAATGTCGATCACTTGCTCCACCGATAACAT
GAGAGTTGTTCTTAACAAAGCTGATTTGAAAGGTTTCTCTATGAGTTCTC
TGCATGTTATTGATCAAAGTGCTCAATGCCAACCTTTCATCAATGCTACA
CATATCATTTTCAATGTTCCTTTGTATGGTTGTGGAACTACAAGGAAGTA
TTTGGAAAATGCAATCTTATATGAAAATAAGCTCTTGAGTAGCACTGCAG
ATTTGATCACAAGATCGAGACAGCTTCGAGTCAATTTCTCCTGTGCTTTC
CCAACCACTTCCAAAGTATCTGCGAACGGTTACGACATTAAGGACATCAT
CCCAGACGTTTTAAAGGAGGAGCAAGGCTTTGGTGAATTCGCTGTCCTCA
TCAATCTTTACCAAGACGAGAAATTCACGCAACGTTTGGATAACGGTGAA
GCTCCTGTTGAAGTTTCAGTTCAAGATCGAATCTTCTTTGAAGTCAAGTT
GGATTCTATCGATCAACGCTTGACGGTTTTTGCGGAGAATTGCTCCGTCA
CTCCGACCGCAAACAAAGACGACCCACGCCGTTATTACCTTCTCAAGAAA
GGTTGTAAAACTGATCCCACGTTACGTAGCTACGCATCCCCGCCTAACGC
GCACCGCATGAGTTACGAATCTTTCACGTTTGTCGGAGTGGAAGACCCAG
TGACGTATCTGCAGTGTGATGTCTCCATTTGCGATAACCAAGCTAAAGAT
CGAAGATGCCGTGACCGAAAATGCGCGGCTGATGATAGTGACCGCAAGCG
ACGAAGTTTATCTCACGGATACATCATGGAAAAGGAGCATCCACACTCAG
GTTTTGTCATCCATAGTAAAGCGATTGTCACGCACGAGTTACACCGACAT
TCACGCAAAGCTCGAAGCATACGTCCTCAAACCGACTTAACTGCCAACGA
AAATAAAGGATTTTATGAATCTAACTTAGGAATTGTGATGGTTGCGCTGA
TGGTCAGCCTGTCTGCCTGTTTGACGCTCGGAATAATTATCTACACCAGA
TATCAACAAAAACAGTCACCAACCACGTTTCCATAGAAACTTAATGCAAA
GCAATACAAACATATAGATAACCGTTAAAAAATATAcgatttatttattt
ctaagAGACGTCacgcaaaatttacaaaaatgcgACAGGGCTCGTCCTCC
ATTTGACGGTGACGTATTTGTAAAGAAGACGAAATACGGTCAAGGCTCGT
TCATGCCGATGGTCCAAAGATCAAGAGGGTCCAGTACCTGGCCCATGACA
TCGCTATGACGACGATACCCTTGCCCAAAAAATGATGCACAATTTCCGAG
acaaaaattttggttttaagagtacaattttatttttatttttcgacatt
ttgaaagagtttattgttattttttgattgaattgacGAAAGCTTTAGAG
AGACAAGTTTAATGGtaccaaattaaacatttttaggtttcatTTGCAAA
ATAAGATCGCCTGATTTCCCGGTCCTTTGCATCTTGTACTGAATATTGAG
CCTAAATCTCGCATTGAATCATTTTAGTAGTCAACAGTTATagaatcatt
gtttttttttaaatatttttctcctaaCATAATTATTGTTGTTAAAAGAA
AACGTTAAAGATATTATTTATGTAAATACAGA Run BLAST on NCBI protein sequence of TCONS_00071047-protein >TCONS_00071047-protein ID=TCONS_00071047-protein|Name=TCONS_00071047-protein|organism=Clytia hemisphaerica|type=polypeptide|length=977bp
STAVAGTTEAPSETTPGETTQGPLVSTEGKGPSTAVAGTTEAPSETTPGE
TTQGPLVSTEGKGPSTAVAGTTEAPSETTLGETTQGPLASTEGKGPSTAV
AGTTEAPSETTPGETTQGPLVSTEGKGPSTAVAGTTEAPSETTLGETTQG
PLASTEGKGPSTAVAGTTEAPSETTPGETTQGPLVSTEGKGPSTAVAGTT
EAPVETTQGPLVSTDGKGPSTAVAGTTEAPSETTPGETTQGPLVSTEGKG
PSTAVAGTTEAPVETTQGPLVSTDGKGPSTAVAGTTEAPSETTPGETTQG
PLVSTEGKGPSTAVAGTTEAPVETTQGPLVSTEGKGPSTAVAGTTEAPSE
TTPGETTQGPLVSTDGKRPSTAVAGTTEAPSETTPGETTQGPLVSTEGKR
PSTAVAGTTEAPGETTQGPFVSTEGKGPTTAVAGTTEAPSETTPGETTQG
PLVSTEGKGPSTAVAGTTEAPSETTPGEITQGPLVSTEGKGPSTAVAGTT
EAPSETTPGETTQGPLVSTEGKGPSTAVAGTTEAPSETTPGETTQGPFVS
TDGKGPSTAVAGTTEAPGELTQGPFVSTEGKGPTTEGALIQRSSSLSPKQ
TTDRISVTIAPTADVLNFVEDCPMSITCSTDNMRVVLNKADLKGFSMSSL
HVIDQSAQCQPFINATHIIFNVPLYGCGTTRKYLENAILYENKLLSSTAD
LITRSRQLRVNFSCAFPTTSKVSANGYDIKDIIPDVLKEEQGFGEFAVLI
NLYQDEKFTQRLDNGEAPVEVSVQDRIFFEVKLDSIDQRLTVFAENCSVT
PTANKDDPRRYYLLKKGCKTDPTLRSYASPPNAHRMSYESFTFVGVEDPV
TYLQCDVSICDNQAKDRRCRDRKCAADDSDRKRRSLSHGYIMEKEHPHSG
FVIHSKAIVTHELHRHSRKARSIRPQTDLTANENKGFYESNLGIVMVALM
VSLSACLTLGIIIYTRYQQKQSPTTFP Run BLAST on NCBI transcript from alignment at scaffold_58:1244321..1250421- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071047 ID=TCONS_00071047|Name=TCONS_00071047|organism=Clytia hemisphaerica|type=transcript|length=6101bp|location=Sequence derived from alignment at scaffold_58:1244321..1250421- (Clytia hemisphaerica)
CATCAACTGCTGTAGCAGGAACTACTGAAGCTCCATCTGAGACTACTCCA
GGAGAAACCACTCAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATC
AACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAAACTACTCCAGGAG
AAACAACTCAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACT
GCTGTAGCAGGAACAACTGAAGCTCCATCTGAGACTACTCTAGGAGAAAC
AACTCAAGGACCACTTGCCAGTACTGAAGGTAAAGGACCATCAACTGCTG
TAGCAGGAACTACTGAAGCTCCATCTGAAACTACTCCAGGAGAAACAACT
CAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGC
AGGAACAACTGAAGCTCCATCTGAAACTACTCTAGGAGAAACAACTCAAG
GACCACTTGCCAGTACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGA
ACTACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACC
ACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGAACTA
CTGAAGCTCCAGTAGAAACAACTCAAGGACCACTTGTCAGCACTGATGGT
AAAGGACCATCCACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAGAC
TACTCCAGGAGAAACAACTCAAGGACCACTTGTCAGCACTGAAGGTAAAG
GACCATCAACTGCTGTAGCAGGAACTACTGAAGCTCCAGTAGAAACAACT
CAAGGACCACTTGTCAGCACTGATGGTAAAGGACCATCCACTGCTGTAGC
AGGAACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAG
GACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGA
ACTACTGAAGCTCCAGTAGAAACAACTCAAGGACCACTTGTCAGCACTGA
AGGTAAAGGACCATCAACTGCTGTAGCAGGAACAACTGAAGCTCCATCTG
AGACTACTCCAGGAGAAACAACTCAAGGACCACTTGTCAGCACTGACGGT
AAACGACCATCCACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAGAC
TACTCCCGGAGAAACAACTCAAGGACCACTTGTCAGTACTGAAGGTAAAC
GACCATCCACTGCTGTAGCAGGAACTACTGAAGCTCCAGGAGAAACAACT
CAAGGACCATTTGTCAGCACTGAAGGTAAAGGACCAACAACTGCTGTAGC
AGGAACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAG
GACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGA
ACTACTGAAGCTCCATCTGAGACTACTCCAGGAGAAATTACTCAAGGACC
ACTTGTCAGTACTGAAGGTAAAGGACCATCAACTGCTGTGGCAGGAACTA
CTGAAGCTCCATCTGAGACTACTCCAGGAGAAACTACTCAAGGACCACTT
GTCAGCACTGAAGGTAAAGGACCATCCACTGCTGTAGCAGGAACTACTGA
AGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCATTTGTCA
GCACTGACGGTAAAGGACCATCAACTGCTGTAGCAGGAACTACTGAAGCT
CCATCAGAGACAACTCCAGGAGCAACAACTCAAGGACCACTTGTCAGTAC
TGATGGTAAAGGACCATCAACTGCTGTAGCAGGAACTACTGAAGCTTCAT
CTGAGACTACTCCAGGAGAAACAACTCAAGGACCACTTGTCAGCACTGAC
GGTAAAGGACCAACAACTGCTGTAGCAGGAACTACTGAAGCTCCAGGAGA
AATAACTCCCGGAGAAACAACTCAAGGACCACTTGTCAGCACTGAAGGTA
AAGGACCATCAACTGCTGTAGCAGGAACTACTGAAGCTCCATCTGAGACT
ACTCCAGGAAAAACAACTCAAGGACCATTTGTTAGCACTGACGGTAAAGG
ATCATCAACTGCTGTAGCAGGAACTACTGAAGATCCATCTGAGACTACTC
CAGGAAAAACAACTCAAGGACCATTTGTCAGCACTGACGGTAAAGGACCA
TCAACTGCTGTAGCAGGATCTACTGAAGCTCCATCAGAGACTACTCCAGG
AGCAACAACTCAAGGACCACTTGTCAGTACTGATGGTAAAGGACCATCAA
CTGCTGTAGCAGGAACTACTGAAGCTCCATCTGAGACTACTCCAGGAGAA
ACAACTCAAGGACCATTTGTCAGCACTGAAGGGAAAGGACCATCAACTGC
TGTAGCAGGATCTACTGAAGCTCCATCAGAGACTACTCCAGGAGCAACAA
CTCAAGGACCACTTGTCAGTACTGATGGTAAAGGACCATCAACTGTTGTA
GCAGGAACTACTGAAGCTCCAGGAGAAATAACTCCCGGAGAAACAACTCA
AGGACCACTTGTCAGCACTGACGGTAAACGACCATCCACTGCTATAGCAG
GAACTACTGAAGATCCATCTGAGACTACTCCAGGAGAAACTACTCAAGGA
CCATTTGTCAGCACTGACGGTAAAGGACCATCAACTGCTGTAGCAGGAAC
TACTGAAGATCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCAC
TTGTCAGCACTGACGGTAAACGACCATCCACTGCTGTAGCAGGAACTACT
GAAGATCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCATTTGT
CAGCACTGAAGGGAAAGGACCATCAACTGCTGTAGCAGGAACTACTGAAG
CTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCATTTGTCAGC
ACTGAAGGGAAAGGACCATCAACTGCTGTAGCAGGAACTACTGAAGCTCC
ATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCACTTGTCAGTACTG
ATGGTAAACGACCATCCACTGCTGTAGCAGGAACTACTGAAGCACCAGGA
GAACTAACTCAAGGACCATTTGTTAGCACTGAAGGTAAAGGACCATCAAC
TGCTGTAGCAGGAACTACTGAAGCTCCATATGAGACTACTCCAGGAGAAA
CAACTCAAGGACCACTTGCCAGTACTGAAGGTAAACGACCATCCACTGCT
GTAGCAGGAACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAAC
TCAAGGACCATTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAG
CAGGAACTACTGAAGATCCATCTGAGACTACTCCAGGAGAAACAACTCAA
GGAGCACTTGCCAGTACTGAAGGTAAACGACCATCCACTGCTGTAGCAGG
AACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGAC
CACTTGTCAGTACTGATGGTAAACGACCATCCACTGCTGTAGCAGGAACA
ACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCACT
TGTCAGTACTGATGGTAAACGACCATCCACTGCTGTAGCAGGAACTACTG
AAGCTCCCGGAGAAACAACTCAAGGACCATTTGTCAGTACTGAAGGTAAA
AGAACAACAACTGCTGTAGCGGGAACTACTGAAGCTCCATCTGAGACTAC
TCCAGGAGAAACAACTCAAGGACCACTTGTCAGTACTGAAGGTAAAGGAC
CATCAACTGCTGTAGCAGGAACTACTGAAGCACCAGGAGAACTAACTCAA
GGACCATTTGTCAGTACTGAAGGTAAAGGACCAACAACTGAAGGTGCACT
CATCCAAAGATCCTCTTCACTTTCTCCAAAACAAACGACTGACCGAATTA
GCGTGACCATTGCACCAACAGCAGATGTGCTGAATTTCGTCGAAGACTGT
CCAATGTCGATCACTTGCTCCACCGATAACATGAGAGTTGTTCTTAACAA
AGCTGATTTGAAAGGTTTCTCTATGAGTTCTCTGCATGTTATTGATCAAA
GTGCTCAATGCCAACCTTTCATCAATGCTACACATATCATTTTCAATGTT
CCTTTGTATGGTTGTGGAACTACAAGGAAGTATTTGGAAAATGCAATCTT
ATATGAAAATAAGGTGAGTTGGTTGCCTAAGTTTTTAGACTCGACCTTAT
CAATTCTTTTTCGTTTGTATGTACGATCACATAAAGGCAAGAACATAACG
TAAGTGCTTTATAATCTGATCTGAAATATTATAACAAGTTCCTTTATATC
AATAACCTAAATTCAAGCAATGAAAATTTCTCAAAAACTTTTGTGTTTGC
TTTATATTTCTATCACTTGTCAAAGTTTTTTTCATCGGGTTCATCTATTT
GATAACATTGTTGTTTCTTCCATCTCAAAGTTTCAAAGGCTAAATTTATT
TATTCATTGGCAATCCGTAAATCGCTTGATCTCTTATTTTACAGCTCTTG
AGTAGCACTGCAGATTTGATCACAAGATCGAGACAGCTTCGAGTCAATTT
CTCCTGTGCTTTCCCAACCACTTCCAAAGTATCTGCGAACGGTTACGACA
TTAAGGACATCATCCCAGACGTTTTAAAGGAGGAGCAAGGCTTTGGTGAA
TTCGCTGTCCTCATCAATCTTTACCAAGACGAGAAATTCACGCAACGTTT
GGATAACGGTGAAGCTCCTGTTGAAGTTTCAGTTCAAGATCGAATCTTCT
TTGAAGTCAAGTTGGATTCTATCGATCAACGCTTGACGGTTTTTGCGGAG
AATTGCTCCGTCACTCCGACCGCAAACAAAGACGACCCACGCCGTTATTA
CCTTCTCAAGAAAGGTTGTAAAACTGATCCCACGTTACGTAGCTACGCAT
CCCCGCCTAACGCGCACCGCATGAGTTACGAATCTTTCACGTTTGTCGGA
GTGGAAGACCCAGTGACGTATCTGCAGTGTGATGTCTCCATTTGCGATAA
CCAAGCTAAAGATCGAAGATGCCGTGACCGAAAATGCGCGGCTGATGATA
GTGACCGCAAGCGACGAAGTTTATCTCACGGATACATCATGGAAAAGGAG
CATCCACACTCAGGTTTTGTCATCCATAGTAAAGCGATTGTCACGCACGA
GTTACACCGACATTCACGCAAAGCTCGAAGCATACGTCCTCAAACCGACT
TAACTGCCAACGAAAATAAAGGATTTTATGAATCTAACTTAGGTAAGAAT
CTTTTATCATTTTTCAGAATCTTTTCAATCTGTTAATCGATAGCTACGTT
AGAAATATTTCATTTATATTTCCAGAAATTTTGAAGTTTGTTATGAATCT
TTTTTTTGGAAATGGATGCTCATTTTTCTTTTAATTTTCCTCTTATAGGA
ATTGTGATGGTTGCGCTGATGGTCAGCCTGTCTGCCTGTTTGACGCTCGG
AATAATTATCTACACCAGATATCAACAAAAACAGTCACCAACCACGTTTC
CATAGAAACTTAATGCAAAGCAATACAAACATATAGATAACCGTTAAAAA
ATATACGATTTATTTATTTCTAAGAGACGTCACGCAAAATTTACAAAAAT
GCGACAGGGCTCGTCCTCCATTTGACGGTGACGTATTTGTAAAGAAGACG
AAATACGGTCAAGGCTCGTTCATGCCGATGGTCCAAAGATCAAGAGGGTC
CAGTACCTGGCCCATGACATCGCTATGACGACGATACCCTTGCCCAAAAA
ATGATGCACAATTTCCGAGACAAAAATTTTGGTTTTAAGAGTACAATTTT
ATTTTTATTTTTCGACATTTTGAAAGAGTTTATTGTTATTTTTTGATTGA
ATTGACGAAAGCTTTAGAGAGACAAGTTTAATGGTACCAAATTAAACATT
TTTAGGTTTCATTTGCAAAATAAGATCGCCTGATTTCCCGGTCCTTTGCA
TCTTGTACTGAATATTGAGCCTAAATCTCGCATTGAATCATTTTAGTAGT
CAACAGTTATAGAATCATTGTTTTTTTTTAAATATTTTTCTCCTAACATA
ATTATTGTTGTTAAAAGAAAACGTTAAAGATATTATTTATGTAAATACAG
A Coding sequence (CDS) from alignment at scaffold_58:1244321..1250421- >TCONS_00071047 ID=TCONS_00071047|Name=TCONS_00071047|organism=Clytia hemisphaerica|type=CDS|length=2934bp|location=Sequence derived from alignment at scaffold_58:1244321..1250421- (Clytia hemisphaerica)
TCAACTGCTGTAGCAGGAACTACTGAAGCTCCATCTGAGACTACTCCAGG
AGAAACCACTCAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATCAA
CTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAAACTACTCCAGGAGAA
ACAACTCAAGGACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGC
TGTAGCAGGAACAACTGAAGCTCCATCTGAGACTACTCTAGGAGAAACAA
CTCAAGGACCACTTGCCAGTACTGAAGGTAAAGGACCATCAACTGCTGTA
GCAGGAACTACTGAAGCTCCATCTGAAACTACTCCAGGAGAAACAACTCA
AGGACCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAG
GAACAACTGAAGCTCCATCTGAAACTACTCTAGGAGAAACAACTCAAGGA
CCACTTGCCAGTACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGAAC
TACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCAC
TTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGAACTACT
GAAGCTCCAGTAGAAACAACTCAAGGACCACTTGTCAGCACTGATGGTAA
AGGACCATCCACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAGACTA
CTCCAGGAGAAACAACTCAAGGACCACTTGTCAGCACTGAAGGTAAAGGA
CCATCAACTGCTGTAGCAGGAACTACTGAAGCTCCAGTAGAAACAACTCA
AGGACCACTTGTCAGCACTGATGGTAAAGGACCATCCACTGCTGTAGCAG
GAACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGA
CCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGAAC
TACTGAAGCTCCAGTAGAAACAACTCAAGGACCACTTGTCAGCACTGAAG
GTAAAGGACCATCAACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAG
ACTACTCCAGGAGAAACAACTCAAGGACCACTTGTCAGCACTGACGGTAA
ACGACCATCCACTGCTGTAGCAGGAACAACTGAAGCTCCATCTGAGACTA
CTCCCGGAGAAACAACTCAAGGACCACTTGTCAGTACTGAAGGTAAACGA
CCATCCACTGCTGTAGCAGGAACTACTGAAGCTCCAGGAGAAACAACTCA
AGGACCATTTGTCAGCACTGAAGGTAAAGGACCAACAACTGCTGTAGCAG
GAACAACTGAAGCTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGA
CCACTTGTCAGCACTGAAGGTAAAGGACCATCAACTGCTGTAGCAGGAAC
TACTGAAGCTCCATCTGAGACTACTCCAGGAGAAATTACTCAAGGACCAC
TTGTCAGTACTGAAGGTAAAGGACCATCAACTGCTGTGGCAGGAACTACT
GAAGCTCCATCTGAGACTACTCCAGGAGAAACTACTCAAGGACCACTTGT
CAGCACTGAAGGTAAAGGACCATCCACTGCTGTAGCAGGAACTACTGAAG
CTCCATCTGAGACTACTCCAGGAGAAACAACTCAAGGACCATTTGTCAGC
ACTGACGGTAAAGGACCATCAACTGCTGTAGCAGGAACTACTGAAGCACC
AGGAGAACTAACTCAAGGACCATTTGTCAGTACTGAAGGTAAAGGACCAA
CAACTGAAGGTGCACTCATCCAAAGATCCTCTTCACTTTCTCCAAAACAA
ACGACTGACCGAATTAGCGTGACCATTGCACCAACAGCAGATGTGCTGAA
TTTCGTCGAAGACTGTCCAATGTCGATCACTTGCTCCACCGATAACATGA
GAGTTGTTCTTAACAAAGCTGATTTGAAAGGTTTCTCTATGAGTTCTCTG
CATGTTATTGATCAAAGTGCTCAATGCCAACCTTTCATCAATGCTACACA
TATCATTTTCAATGTTCCTTTGTATGGTTGTGGAACTACAAGGAAGTATT
TGGAAAATGCAATCTTATATGAAAATAAGCTCTTGAGTAGCACTGCAGAT
TTGATCACAAGATCGAGACAGCTTCGAGTCAATTTCTCCTGTGCTTTCCC
AACCACTTCCAAAGTATCTGCGAACGGTTACGACATTAAGGACATCATCC
CAGACGTTTTAAAGGAGGAGCAAGGCTTTGGTGAATTCGCTGTCCTCATC
AATCTTTACCAAGACGAGAAATTCACGCAACGTTTGGATAACGGTGAAGC
TCCTGTTGAAGTTTCAGTTCAAGATCGAATCTTCTTTGAAGTCAAGTTGG
ATTCTATCGATCAACGCTTGACGGTTTTTGCGGAGAATTGCTCCGTCACT
CCGACCGCAAACAAAGACGACCCACGCCGTTATTACCTTCTCAAGAAAGG
TTGTAAAACTGATCCCACGTTACGTAGCTACGCATCCCCGCCTAACGCGC
ACCGCATGAGTTACGAATCTTTCACGTTTGTCGGAGTGGAAGACCCAGTG
ACGTATCTGCAGTGTGATGTCTCCATTTGCGATAACCAAGCTAAAGATCG
AAGATGCCGTGACCGAAAATGCGCGGCTGATGATAGTGACCGCAAGCGAC
GAAGTTTATCTCACGGATACATCATGGAAAAGGAGCATCCACACTCAGGT
TTTGTCATCCATAGTAAAGCGATTGTCACGCACGAGTTACACCGACATTC
ACGCAAAGCTCGAAGCATACGTCCTCAAACCGACTTAACTGCCAACGAAA
ATAAAGGATTTTATGAATCTAACTTAGGAATTGTGATGGTTGCGCTGATG
GTCAGCCTGTCTGCCTGTTTGACGCTCGGAATAATTATCTACACCAGATA
TCAACAAAAACAGTCACCAACCACGTTTCCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071047-exon-scaffold_58-1575043694:1248763..1250421 | TCONS_00071047-exon-scaffold_58-1575043694:1248763..1250421 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1575043694:1246259..1246680 | TCONS_00071047-exon-scaffold_58-1575043694:1246259..1246680 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1575043694:1245180..1245927 | TCONS_00071047-exon-scaffold_58-1575043694:1245180..1245927 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1575043694:1244321..1245023 | TCONS_00071047-exon-scaffold_58-1575043694:1244321..1245023 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1510915933:1248763..1250421 | TCONS_00071047-exon-scaffold_58-1510915933:1248763..1250421 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1510915933:1246259..1246680 | TCONS_00071047-exon-scaffold_58-1510915933:1246259..1246680 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1510915933:1245180..1245927 | TCONS_00071047-exon-scaffold_58-1510915933:1245180..1245927 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1510915933:1244321..1245023 | TCONS_00071047-exon-scaffold_58-1510915933:1244321..1245023 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1491911889:1248763..1250421 | TCONS_00071047-exon-scaffold_58-1491911889:1248763..1250421 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1491911889:1246259..1246680 | TCONS_00071047-exon-scaffold_58-1491911889:1246259..1246680 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1491911889:1245180..1245927 | TCONS_00071047-exon-scaffold_58-1491911889:1245180..1245927 | Clytia hemisphaerica | exon |
| TCONS_00071047-exon-scaffold_58-1491911889:1244321..1245023 | TCONS_00071047-exon-scaffold_58-1491911889:1244321..1245023 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:1244321..1250421 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001507 | ZP_dom |
Blast
BLAST of TCONS_00071047 vs. Swiss-Prot (Human)
Match: CUZD1 (CUB and zona pellucida-like domain-containing protein 1 OS=Homo sapiens GN=CUZD1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.309e-28 Identity = 90/297 (30.30%), Postives = 151/297 (50.84%), Query Frame = 3
Query: 1746 GPTTEGALI-QRSSSLSPKQTTDRISVTIAPTADVLN------------FVEDC-PMSITCSTDNMRVVLNKADLKGFSMSSLHVIDQSAQCQPFINATHIIFNVPLYGCGTTRKYLENAILYENKL---LSSTADLITRSRQLRVNFSCAFPTTSKVSANGYDIKDIIPDVLKEEQGFGEFAVLINLYQDEKFTQRLDNGEAPVEVSVQDRIFFEVKLDSIDQRLTVFAENCSVTPTANKDDPRRYYLLKKGCKTDPTLRSYASPPNAHRMSYESFTFVGVEDPVTYLQCDVSICD 2585
GP+T LI Q ++P + S+T+ + D N + E+ S+TCS+D MRV+++K+ L+ F+ + ++ + C+P ++ + F+VPL GCGT RK + +I Y N + SST+++ITR +QL++ C S V Y +D DV++ + G++ + L++ F + + E+P V + +F +V L + D L VF + C +PT++ P Y L+K GC D T + Y + R + +F F+ V YLQC V ICD
Sbjct: 217 GPSTNSGLIGQVCGRVTPTFESSSNSLTVVLSTDYANSYRGFSASYTSIYAENINTTSLTCSSDRMRVIISKSYLEAFNSNGNNLQLKDPTCRPKLSNV-VEFSVPLNGCGTIRKVEDQSITYTNIITFSASSTSEVITRQKQLQIIVKCEMGHNSTVEI-IYITED---DVIQSQNALGKYNTSMALFESNSFEKTI--LESPYYVDLNQTLFVQVSLHTSDPNLVVFLDTCRASPTSDFASP-TYDLIKSGCSRDETCKVYPLFGHYGRFQFNAFKFLRSMSSV-YLQCKVLICD 504
The following BLAST results are available for this feature:
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