TCONS_00071064 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071064
Unique NameTCONS_00071064
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3661

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071064 ID=TCONS_00071064|Name=TCONS_00071064|organism=Clytia hemisphaerica|type=transcript|length=3661bp
ttttcgctttttttttgTGAGTTTATTGGATAATCTCCAATGATTTCACT
GAAagcaaaagttatttttcaatgttttggaTGTAAACGGCAACAACTTT
GCCGGACCAAAATATTTTACGACTGTTTTCTTTTTACAATGTAATGATTT
CcatgtttcaatattttccaGATCTATATTCTCCAGCTAACCATTATTat
gtgtatttttctttttttctcctcATTTCAGGTCAATCTACCACCAAAGA
TGTTATGATAACCAAATTGGTACCCCCTGAAGATATGGTTCCTAGGATAT
CTGGCTCTTGCCCACAAGAAGGGGAGGGgaattgaaaataatagaaatat
aaaattgAATTTACCAGCACTTGAACGGATAATTCCAGACTTAATTTGCT
CTTTGATGATCTGAAGGGCTtaagctttcaaaattttggcttATTTagtc
gattggtttcgattacgggcttttttggtgaaaaaatcGATATTTGACAA
GACATTTTTGGTCGAATAAGTTTTTTACGgcagccatctttaattttgtt
ttggtAGACTGCGTCGAGTTCAGACATGCGCACTCGATTATTGTGGTCAT
CTGACACTTTTCGGCGAGAGCTTGCATCGTTGTATAGATGATGTAAAATG
GAATTTTCGTAAGATGGATTTGGACAGAGATAAATGAAAACTCCCGCCTT
CTTGTGTATTATTGGGTACGAAGAAATTGTTAGGTTTACTTTtgtatttc
aataaattttaacTGGATCATACACACCCTTGAAAAATTGTTGGATATTT
ACTTCTTTGAAagattgttttcaattttaCGCGCTCTCATAACAACAAAG
ACTCGGTGTGGTGTGGTTCGCGGCACGATGACTGGCGTTATAAAATGTGG
CTGCTTTCAATAACAACGTGTATGGCTAACGATTGTATTGATGGCTCCGG
CTTTGGTTGAGCTTTCTACTTCTAAGGAGAGGAACTCCAGTAGTAAGAAa
tacatagaaaatttttcttgcATGTCTCGTTTGAACCTTGAACTGGTTGA
CAAGATAAGATTTGTTGACTCTTCTCCCTTGTTTACATGTGACATTGACA
AAAAAgttaatgaaaatttgaattctaAAGAGTTCATTTCTCAAGTAATG
GTTTCACATGAAAGTGAAAAAACGCCAATCAGCAACAGAAATGGAAATCT
GCATAAAGTAATCAAAGAGGAAGTTATTTTGAACCTGAAAAGTGAATCat
tcaaaaaccaaaattctaATAACCACATCAAGCAAAATGGATGTGCTGAC
TTGATACCCCATGTCCAGAAAATTATTGATAAACCAACTTGCTGTGCAAC
TACGATTGATGTCAACCGGGAACCGCAACCAGTTGCTGAATTTAAGCCGA
CATCGCAAATCAAACAACTTCTCAAATCGAAAGAACAATCCATCAGCAAT
AATTTTTCCTATATTGACAATAATCTCAATTCATTGAATGAACGTCTGAA
AAGACTGACGTCAAAAAGTTTATCATCAAATGTTGCTTGTTTTGTcagta
aaagtaaaaaagtcttGAACTATCACGACAAGCCTAAAGAAAAGGATTAC
AAGAGTTGCAAGACTGATTTTAGCGAATCTAAGTCATTACCGCTTCCTTT
AAAACTTTCATATGACGTTCTTCCTGACCCAATCACTGATAATGAGGATG
ATCTAGACGTAAAGCAACATATTCCTTTTGGTGGAAAGCGACAAAAAAGC
TCTAGACCAGCCCCACCTTCAAATGTTCTTCATCAATGGAAACAAAATCG
TGCCAAGATTGGGTCCCAATGCTCCTGGTTAACACTCAAGATGGCCGCGC
TTGATGACAAGATTTCATCCTTGAATAAAGTTCatacaaaccttaaaacc
agcAGAACTGTGAGAAACCATACATTTGACGAAGCAGCAAAAAGACAAGT
GCAATTGAATAACAGAAATGGACTAAACGACACGTCTCAGGCAGATTGTG
GTTGTAGTAGAACAAGACCATTACTTAATAGTCAATATCACAAATATTTA
CGACAAAACAAATATATCCCACAGACTAGCAATCAAGACTCGTATTCTTG
TCATTGCATTGGAGGAAGCGCTGGCTGTCGATTTTGTACAAAACGTTTCA
GAATGGATATGTGCTCTCAAACGAAAGTTGAACTTGATCAAAATTATCAT
CCAATTCTATCACAACAAAGTGacgtTTCGCTGTCCTACCTGCTCGAAGA
AACGCTTCGGAAGCAAAGAATCAACACCAAAGTGACAATcaccaaatcaa
aaaagaaaaaGAAACGACCTCAATCACTGACGACTCATTCACCCATCGGA
GAAAAAGTTGAAAAAGCATTGAAAGCGAAGAGTAAATCGGAGCGCTCTAA
ATCAGACGAATATTCAAGAAAACGTTACGCGGCATCTGACATTTCGAGCA
AACTAAAGAAGTTTCGTAAGCTTTCCGAATCTTGTGATAGCGCATCCAAG
CCTTCGACACCGACCAACGAGCTCGCGAGTCCTTTATCACAAAGTCTTCC
GTCGACCGGTTTGTCTGGTCTTAAGAAGAAGAAGGGAGCGAGCGCCAACT
ACGACATTGATAATATCGTCATCCCCTACTCGATCGCGTCATCTACTCGT
GTCGAACGCATTCAATACAAAGAAATCCCCACGCCTGGATGGAGAGCAGC
TAACGATCTGCTGAACAATGACGAAATAGATTTAGAAGACGAATTGACGG
ACGACGAAACGTTTAGAGAAAGACATTCGCGTTGTGAAGTCACAGAACAG
AAGCGATTCACGGATTATTTCCAACCAGTTCGACGACAACGCTCCGTTCG
AACGATCAGCGAAGGACCAAACTCAGAACCTCCTTCTCCGCACATGATCG
ACGAGCGTTCTCTTGTCAACACGCCCGTCGAATCGCCCAACCCTCTGAAA
ATTCTCCAGAATCGATTAGCAAATGTTTGCGAATGCACGGAGGCTGAGCG
TGACTTGCCTTGGTTACCTCGGAAATTCCCCTTATCAGAACTTGAAACTG
TGAAGTTGGAGGTGTTCAGTGCACCGCCTTCTCCTTGTTTTGGGGAGCCA
CCGAAACGAATACCTAAGCCCTCGTCTTTATCCCGATCTTCTTCGTACAC
ACACCTCGCGAACATTACGCCACGAAATTCACCTATACCTTCAATGTCAC
CTCTCGCCAGCCCTCCTACGCCTGAATCTAATTGGACAGTCAAAGTTTTG
AACAATGCGGACAATCAAGACATGCCTACGGTGCATGCGCCGACGTTGAA
TGATAAGCAGCAACGAAAAGGCATTGTTTTGAAACTTGCCAAAAAATGAC
ATTTGgcatttttaagaaattttctcggaattttttttctcgatagtTCA
TATTATctgatcttttctttttttctgaaagatttttCCTTTGTAcaatt
ttgtaaatactttatTCCAGTTatgttttctctctcttttcCGAACTGAC
TTATATATTCTACAAATAAGCTATTAAAAGATAAGACCAGAGAGatgtga
agaagaagaaaaaacataaaaaaatctaataacagaaagaaaataaagaa
aaatgaacacAAGATTTTTATTCGGTTTCATTCTTATCTTATTTCGTAAT
TATTATGTCCA
Run BLAST on NCBI

protein sequence of TCONS_00071064-protein

>TCONS_00071064-protein ID=TCONS_00071064-protein|Name=TCONS_00071064-protein|organism=Clytia hemisphaerica|type=polypeptide|length=802bp
MAPALVELSTSKERNSSSKKYIENFSCMSRLNLELVDKIRFVDSSPLFTC
DIDKKVNENLNSKEFISQVMVSHESEKTPISNRNGNLHKVIKEEVILNLK
SESFKNQNSNNHIKQNGCADLIPHVQKIIDKPTCCATTIDVNREPQPVAE
FKPTSQIKQLLKSKEQSISNNFSYIDNNLNSLNERLKRLTSKSLSSNVAC
FVSKSKKVLNYHDKPKEKDYKSCKTDFSESKSLPLPLKLSYDVLPDPITD
NEDDLDVKQHIPFGGKRQKSSRPAPPSNVLHQWKQNRAKIGSQCSWLTLK
MAALDDKISSLNKVHTNLKTSRTVRNHTFDEAAKRQVQLNNRNGLNDTSQ
ADCGCSRTRPLLNSQYHKYLRQNKYIPQTSNQDSYSCHCIGGSAGCRFCT
KRFRMDMCSQTKVELDQNYHPILSQQSDVSLSYLLEETLRKQRINTKVTI
TKSKKKKKRPQSLTTHSPIGEKVEKALKAKSKSERSKSDEYSRKRYAASD
ISSKLKKFRKLSESCDSASKPSTPTNELASPLSQSLPSTGLSGLKKKKGA
SANYDIDNIVIPYSIASSTRVERIQYKEIPTPGWRAANDLLNNDEIDLED
ELTDDETFRERHSRCEVTEQKRFTDYFQPVRRQRSVRTISEGPNSEPPSP
HMIDERSLVNTPVESPNPLKILQNRLANVCECTEAERDLPWLPRKFPLSE
LETVKLEVFSAPPSPCFGEPPKRIPKPSSLSRSSSYTHLANITPRNSPIP
SMSPLASPPTPESNWTVKVLNNADNQDMPTVHAPTLNDKQQRKGIVLKLA
KK
Run BLAST on NCBI

transcript from alignment at scaffold_58:1439163..1449946-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071064 ID=TCONS_00071064|Name=TCONS_00071064|organism=Clytia hemisphaerica|type=transcript|length=10784bp|location=Sequence derived from alignment at scaffold_58:1439163..1449946- (Clytia hemisphaerica)
TTTTCGCTTTTTTTTTGTGAGTTTATTGGATAATCTCCAATGATTTCACT
GAAAGCAAAAGTTATTTTTCAATGTTTTGGATGTAAACGGCAACAACTTT
GCCGGACCAAAATATTTTACGACTGTTTTCTTTTTACAATGTAATGATTT
CCATGTTTCAATATTTTCCAGATCTATATTCTCCAGCTAACCATTATTAT
GTGTATTTTTCTTTTTTTCTCCTCATTTCAGGTCAATCTACCACCAAAGA
TGTTATGATAACCAAATTGGTACCCCCTGAAGATATGGTTCCTAGGATAT
CTGGCTCTTGCCCACAAGAAGGGGAGGGGAATTGAAAATAATAGAAATAT
AAAATTGTAATTTTTTTTTGCTTTTATCCCAAAATTGGGCCAATCCTTTG
ACATATAAAGATTAAGTTTCATTCAACATTGAATAAAAGAAGTAAAATAT
CAATCCAAGCAACTTTGAAAGCGGTGAAATGCAGAGTTTTGGTTTTTCCC
CAGATTTCTCAGATTTCTTATAGTTTGAAGGCCTCAATATATAATTTTCT
TTATTTCTATTTTTCAGGAATTTACCAGCACTTGAACGGATAATTCCAGA
CTTAATTTGCTCTTTGATGATCTGAAGGGCTTAAGCTTTCAAAATTTTGG
CTTATTTAGTCGATTGGTTTCGATTACGGGCTTTTTTGGTGAAAAAATCG
ATATTTGACAAGACATTTTTGGTCGAATAAGTTTTTTACGGCAGCCATCT
TTAATTTTGTTTTGGTAGACTGCGTCGAGTTCAGACATGCGCACTCGATT
ATTGTGGTCATCTGACACTTTTCGGCGAGAGCTTGCATCGTTGTATAGAT
GATGTAAAATGGAATTTTCGTAAGATGGATTTGGACAGAGATAAATGAAA
ACTCCCGCCTTCTTGTGTATTATTGGGTACGAAGAAATTGTTAGGTTTAC
TTTTGTATTTCAATAAATTTTAACTGGATCATACACACCCTTGAAAAATT
GTTGGATATTTACTTCTTTGAAAGATTGTTTTCAATTTTACGCGCTCTCA
TAACAACAAAGACTCGGTGTGGTGTGGTTCGCGGCACGATGACTGGCGTT
ATAAAATGTGGCTGCTTTCAATAACAACGTGTATGGCTAACGATTGTATT
GATGGCTCCGGCTTTGGTTGAGCTTTCTACTTCTAAGGAGAGGAACTCCA
GTAGTAAGAAATACATAGAAAATTTTTCTTGCATGTCTCGTTTGAACCTT
GAACTGGTTGACAAGATAAGATTTGTTGACTCTTCTCCCTTGTTTACATG
TGACATTGACAAAAAAGTTAATGAAAATTTGAATTCTAAAGAGTTCATTT
CTCAAGTAATGGTTTCACATGAAAGTGAAAAAACGCCAATCAGCAACAGA
AATGGAAATCTGCATAAAGTAATCAAAGAGGAAGTTATTTTGAACCTGAA
AAGTGAATCATTCAAAAACCAAAATTCTAATAACCACATCAAGCAAAATG
GATGTGCTGACTTGATACCCCATGTCCAGAAAATTATTGATAAACCAACT
TGCTGTGCAACTACGATTGATGTCAACCGGGAACCGCAACCAGTTGCTGA
ATTTAAGCCGACATCGCAAATCAAACAACTTCTCAAATCGAAAGAACAAT
CCATCAGCAATAATTTTTCCTATATTGACAATAATCTCAATTCATTGAAT
GAACGTCTGAAAAGACTGACGTCAAAAAGTTTATCATCAAATGTTGCTTG
TTTTGTCAGTAAAAGTAAAAAAGTCTTGAACTATCACGACAAGCCTAAAG
AAAAGGATTACAAGAGTTGCAAGACTGATTTTAGCGAATCTAAGTCATTA
CCGCTTCCTTTAAAACTTTCATATGACGTTCTTCCTGACCCAATCACTGA
TAATGAGGATGATCTAGACGTAAAGCAACATATTCCTTTTGGTGGAAAGC
GACAAAAAAGCTCTAGGTGGGTATAGCTTTTATATATCATCAAAAGAATT
TGAGAGGGGGAAAAATTTGCCCAAAAAAATACAGGTGGACTTATTTTCGT
AGTATTTGTCAGTCAATCTGTTGCATTTGACAGTATATACTGAGTGAATT
TTAGAAGTTCTGAAAAAGTTCAAAATTGAAGAGGATGAAATTTTCTTTGA
CTACTTTAATGGGATAAACTTTTGCGGGATTAAATTTCGCGGTTGGGCCT
GTACGTGAAATTCAAAAATTTCGCGCGGACTTAATTTCGCGGATGGCACT
ATTGGGTGGCAATATTTTCACAATTTTGTGACTTTAGCTGTCAAATCGTG
CATGTTGGTTGTTGAAATACACATTATTAGCGCCTCTTTGATGCAAGTAA
CAATTCAAATAGTATTTATTTGACATATTTTGAGTTTTATTTAGAAATAT
TTCGCGAATGAGGCCCTTCCAAATTTCCATTGGGACTTAATTTCGCAGAT
TTTCGCGGATGACACTCAAATCCGCGAAGTCCGCATAATTTAATCCCCGC
AAAAGTTTATCCCATTAAAGTATATTGACAGTCAAGGATTATGACAAATA
AGGAAACCTGTTGACAATCTCCCATTTAGGAGATTCAGGTATGCTTAATA
GGAGAGTAGACACATTGACATAGATTTTTGTGGTTTTATTACATTGATCC
GCATTCCCAAAACTACCTTAAAGGAAGAAATTTTGGCGGAAAGAAAATTT
GGCGGATTTGGCCAGAATCCGCCAAATTAAGTTCCCGCTAAAATTTCTTT
TTTTCGCCGTCCGCCAAAATAAATTCTCGCCAAATTAAACTTTTTGAAAA
TATGATCTCTTTTAAGGTGTTTTTGCATTTTTTTGCGTATTTGCATATTT
TTACGCCATTTTCAGGATAGATTTTTTCGTCCAACTGCCAAATTAAATTC
CCTCTAAAAAACTTTTTCGGCCATCCGCCAAATTGAATTCCCGCCAAAAT
TTCTTCCTTTAAGGTATACAAACCTTTTCTACATCCAGAATTGCATCACT
GACCATAATTTCAAGTTGTTTCTCTGATGGGCTCCTCAAAAATTAACACC
ATTAAAAATCTGGCGTACAGAGCCTGACACTAACACAGGCTAAAATCTTA
TATTTTTCTTTTTACAAAACAACCTGCTGGGTCCTACATTTTAAAATTTC
TAGAAAGTGTCTGGGTACTTTTCTTTGCAGATAAAAAGTGCTCGGTGCAA
AAGTCTTTTTTTAATACCAATCCCTTTTTGCTTGATATGGAATAATTAAG
GATAATTCCAGATTTTCAGGTTTTTCTGATTGATAGGAAGAATATAACAA
TAGCGTTCAGTTTGAGGGGCAGAATTAATGACAACAACAAACAAAAACTT
AACGCTATTACTATTACTATCCATATTGGACATTCAAACAACGTTTTTTT
CTAGTGTCAGCCAAGTTATCTCGCTTCAATGCAATGTCTTCAACGAGTTT
TTAGCACCTTGCAAGCGGGCCGTAAATAACCAAGAAGTGTTTTTTTCCGA
CGTTAGCTTAAGTGGATAAATTTTGCCGTGGAATTATAAATACAATTTTT
GGCAGAAATTTAATTTGGCGACAGATCAATTTCGTAAAATTTGGCGGGGA
TTTAATTTGGCAAATTGGAAATTTTGTCACATTGAAGTGGGTGAAAATTA
CTCAAAAATATACTAAAAATTTGTGATTTTTCACATAATTCTCTTTTTGT
TAAATTTGGCGGGGATTTAATTTGGTGAATTCCCGAATTTGGCAAAATTC
GGCAAAATTTGCCAAATTTAATCCCCGCCAAAATTTATCCACTTAAGGTA
GTTTAGTGCAACGACTTCAATCCAATTCCAAGCAGGCCGCAAATGATGTT
AACCTGGGCCCTCTGAAGCCTGGCACTTTAGTTTCCTCAGCGCGGGTATG
ACAATTTGAGTCACAAAACCTTTCAATACCACCCGCCGATTGAACCTTTA
ATGACCGCTATATGGATAGTAATAATTAATAAGGCCCTCTGTAAGTATTG
AAATGTAAAAAATAATGTAAAAAATAATTGAGGCTTGGAATTGGTACACT
CTTATTTTATAACAAGCAGAAAAATTTTGATGAGGCTTCACTGTTCTTAT
ATTTTGGCACTTTGAGCCTCAGAGAAATTGCTCTCATCCTTGTAGGATGA
AATTGAGGTATTTTAAGGCTTTATACCCAATTTTTACTACTTAGACTACT
TTGACCCCTAAATTGCTTGTAATTCTGTGTAATTGAGTAATTCCAGCCTC
AACATTTTTCTTGAATTGTTCTTATTTTTTGGCAATTTTGAGCCCTCATT
GCTCTTATAAAATTGTTCTTACAAAAAAAGAGTTAATGTTAGAAAAAAAT
TGTTACTTTAGAAATAAACTTTGGTTTTACAGCATAAAAAAAGTTAGTGA
TATAAAAAAAGTTGGTATTGAAAGCCTTTTGGGGCCATAACAGTGTTCCA
TATTCTAACACACTTCAGTGGCTATAAGGCTAAAGCTTTGCGTTTGCAGG
TTTTCCTTAGTTTCCAGACCAGAGTTCCTGGCACAGTTCCTCTCAGCAAT
TTCTCAGTGATTCATATTATTAGAAATTTTCAAAAGCCTGGCATACACCA
TTTAAACTCTTTGATGGGAAATCGCTCTTATCTTTTTTAATCCACTCAAA
AAACATATCTTACTTGGAATACCATAAGAATATCTTAATTATGAAGATAA
ACTTTGAGAAAAAATCACAACAGGTCTCTGATTTGAATTCAACTTTTGAC
ACCTTGTACCTTATGCAGCCTTATGTCTGGAGATGGGTCTCTTACCTTTT
TACAATTTTGAAAAACTTGTCCTCATGAAAAAATTGATTTTGCCAAAGCC
ACAAGAAAAGAGACAGGTCTAAAACGCATTATACCTACAACGTAATACCT
AATGTTCTTGGTAAGCCTTTAGGATCAAAATATACTGATATATACTTGGA
CAAACGCTGGTATTTTCGTTTTAATTGTTCCTCCTTGTGTCCTTTTTTTT
CTGGATAAGGGCTCAAACTGACAGTGCAGTTGAGTGTTGGAAAGAGTCGG
ACCCAAAAATCATAATTTTCAAGCTAATAAAGCAACCCCAATCAGATATT
TTGTCAGACTCACTCGAAATTGTTATGTGGATTCTGTCTGTAATCAATAA
CACCATATGATAATTTTTGAACTTATTTCTTTCAGACCAGCCCCACCTTC
AAATGTTCTTCATCAATGGAAACAAAATCGTGCCAAGATTGGGTCCCAAT
GCTCCTGGTTAACACTCAAGATGGCCGCGCTTGATGACAAGATTTCATCC
TTGAATAAAGTTCATACAAACCTTAAAACCAGCAGAACTGTGAGAAACCA
TACATTTGACGAAGCAGCAAAAAGACAAGTGCAATTGAATAACAGAAATG
GACTAAACGACACGTCTCAGGCAGATTGTGGTTGTAGTAGAACAAGACCA
TTACTTAATAGTCAATATCACAAATATTTACGACAAAACAAATATATCCC
ACAGACTAGCAATCAAGACTCGTATTCTTGTCATTGCATTGGAGGAAGCG
CTGGCTGTCGATTTTGTACAAAACGTTTCAGAATGGATATGTGCTCTCAA
ACGAAAGTTGAACTTGATCAAAATTATCATCCAATTCTATCACAACAAAG
TGGTAGGTTGTTTGTTATTGTAGATCTTACTATTCGGTTCTTTCTGAACG
ATTCTTTATCAGANTTTGTTATTGTAGATCTTACTATTCGGTTCTTTTTG
AACGATTCTTTATCAGACTGACTGCAATGCAAAAAGGATATGGCATGAAA
ATATTTTCAGATTGAAGAACAACACCTATTCATTCTATGCTTGGTATGTG
AGGCCTTGCATTTAGTTGCAATCTGCCATTTAAACTTGCTTTTTTATTTG
GATACATTAATACTTTTTAAGCAAATCTGGAAGCGGTAATCTAATTAAAT
CTTCCAATTGCTTGATCAAACTCTCGCAGACTGTCTCATTATTTTGATAG
GAATGCACACTCCCAATAGAGATTTCCAAATTTATATGATTTATTCCATT
TCAATAAGGGATGCTAACTTTTCTGGGGGCTTGTGTAGGTGAGGTACCAG
GATTTTTCAAAAGAAATTGGGAATTTAGGGGGGGAGGTCAAATAATAAAA
GGGGGTTTGGAAATTTGATCATATACAAATAGGCACAATCTGTGATGGCT
TGGCTTGTGATGGTGTATGCTTTGTACTCTTTGGTCAGTTTGGTTGTGCA
TGGGGGGGGGGGGGAAAAAAACATTTACAAAGGGGGGGGGGGGAAAATAT
CATTACAGAAGGGGGGGGGGGGAAAATATCATTACAGAAGGGGGGGGGGG
GAAAATATCATTACAGAAGGGGGGGGGGGGGTAAAATATCATTACAGAAG
GAGAGGGTGAGATAAGCCTCGAAGGTTTATACACCCCCTCTGCAAACTAT
GCAGATTTCATTTCCCACGAGACAGATTTTAATCAATACCAATAGCCCTC
AGTTCTTTTTGTCTAATTTTCATAAACCTTTTTAAATTATTGTCAATAAA
TACTGTCCAAAACCCAGGTCTCTCTCAAACACAATATGACAATATGAGAG
TATCATTGAACAGTGTTTTTAGTTTTTAGGGTGATTGGCTCTTGGTAAAA
ATCATTTAAGTGATGACTGCGTATTGATATTAAGCAGATATGCGACAAGA
ACCAGCTAAATATTTTCGATATCCGAATCTTTCGCGTTGAATATTTATCG
TTCACTCATCTACAGAAAAATATTTCCTACTTTCGTTTCCTTCGTCTCTT
TCTCAAAAGACTCTTCTTTTCGAACGTTTCACTTTCTCATTACTATCATT
GTTTTTCTTTTATTACAAATAAATCAAATTACTTTTTTTAATTCCACATC
ACCTGTTGTTTATTTATAAAAAGAACAAACACTTCAGTTATTTATTTGGC
ATTTTATATTTTTTGACGAGCTCGCAAAGAGATACTTTAAAAGATGGGAT
GATGTGGCTCAATTAAATTTGAAGGAATAGTTTAACAAGTATATTGCAAA
ATATATGCTAGGGGACCTGTCAAATGTTTAACCCAAACTTGGTTAAACCC
AATACATGGATTTAATAATTTTTATTTTTCAGACGTTTCGCTGTCCTACC
TGCTCGAAGAAACGCTTCGGAAGCAAAGAATCAACACCAAAGTGACAATC
ACCAAATCAAAAAAGAAAAAGTAAGAACCCTGGAGTTTTTTTAGCTCTAT
CAGTCGTTATACGGTATCTATGAAAAGCTATTTCTCTTTTTCTTAGCGAT
TTTTTGTCCTGCTTCGTGAACTTTGATAAAAAAACATTGGAAAGTTACAC
TTCGGAACTTTTATTAGACCCCTAAATGTCAGAAAGCCGAATCACAAGTC
GAACATTCGTCAAATTATTAGAAACTCGTTTTTTTTGTCATAGGAAACGA
CCTCAATCACTGACGACTCATTCACCCATCGGAGAAAGTAAGTTTTATCG
TTTTATGTTTTTTGACAAACGACGATATGTATAATTTGCGAGTTAACATA
TGATAACCTTAAAGTATAGTATACGAGTTGATAAATAGTACGGTCTATTG
GACAGGTGCTTTTACTGTTCACCGAATAAGCTGGAAAACATATTCGCATA
TCGTTTCGTATGTTGGGTATCTGTTTTACTGTCTTGCTTTTCTCTTTTCT
AGAAGTTGAAAAAGCATTGAAAGCGAAGAGTAAATCGNGTCTTGCTTTTC
ACTTTTCTAGAAGTTGAAAAAGCATTGAAAGCGAAGAGTAAATCGGAGCG
CTCTAAATCAGACGAATATTCAAGAAAACGTTACGCGGCATCTGACATTT
CGAGTAAGTTTGCTTGTTGCTCTATATTAGATACTACAAATAAAAATTTT
CCGTCTGTTAAAGCCTTATGAATAGACAGGATAACATCTATTTTTGTCTG
TGAAAATAATCACTCAAAAACAGAAGGTCCTTGCACTAAAACCCCCTTCT
TTGTTTTTCTTTATCCTCCCGTGGAGTGATTTGTAGATGCTTTGCTTTTG
AAAATATCATATTTTACTTTAAACCTAGACTAGTAAATTAGTCGTTGAAA
ACAGACCAATATACAAAAAATTCAAGCTCCAAATAAAAAGAATCAAAGAG
GTGAGGTTGCGTGTCTTTTCTGAATTTCAACGACTAGAAGCTTCTTCCCT
CAAAAAACGTTGTTTAATTTTACAACTATTTTTAGGTTTTTGAGATCCAT
CCTAACTTTTTTGACTAAATGATATTTCATAGTAACATAAAACATGGGAA
CATATAAATAAATGAGCATTTCCAAAAATGAAATAAACAGAAAGAAAAAT
GAATGCAATCCCGCACGGGTCAGACAGTATGTCTCACCTTACGATTTTAG
GTGAAGAAAAAAAGGCGTTGGAAGCATTGAGTTTAAAGCCCGAAGGGCTA
GAGTTCAATCTCTAACCTTTCTCAGGCAAGAAAAAGTGAAGCCTTAAATG
ACGACAGATTGAATCTAGCAATTCCTTTGTTTACGATTGATATTTTTTTC
GAAATTTAGCGGTAAATTCTAGTTTCAATCTGTCATTTGTGGAAAAACCA
GGCGACCCGCTCAAGGCCGCGCAACTTTGGTAGGATTTGTTGGCTTCAAA
TCCTACCAAGGAGATTGACTTCTAGCCCTTCGGGCTTATACTTCATTGGT
TGGAAGTAGCTTCTAGTCGGTTATTTTCCTTTTCTCTCACGCGCGCTGAA
TATTTACGACTAGTTCACTAGTCTACTTTAAAACGTGTTTCGTTTGTTAT
TAAAACCCATCAAGAACCACGAAGAAGCCGTTTTATTTACTCCCGCCGTG
TTTTAGTGTATCAGTGAATGGTCCTCTTTACAAACAACTTTGTTCAAGCT
GTTTCACTTAAGTGAATCAGTTCGATCGTTTTAATAACTGTTCATTTTTA
TCTCCAGGCAAACTAAAGAAGTTTCGTAAGCTTTCCGAATCTTGTGATAG
CGCATCCAAGCCTTCGACACCGACCAACGAGCTCGCGAGTCCTTTATCAC
AAAGTCTTCCGTCGACCGGTTTGTCTGGTCTTAAGAAGAAGAAGGGAGCG
AGCGCCAACTACGACATTGATAATATCGTCATCCCCTACTCGATCGCGTC
ATCTACTCGTGTCGAACGCATTCAATACAAAGAAATCCCCACGCCTGGAT
GGAGAGCAGCTAACGATCTGCTGAACAATGACGAAATAGATTTAGAAGTA
AGTTACCATAGCAACCATAAACTTTTTGATGTTATAAATGTGAAAAGGGG
AAGGCTGATGTAGAAGGCTTTATCGCTCTTTCGTGGCTGATTGAAAGAAA
TCGTTTTAATTCTTTCTACATTATTAATAAACCGATAAAACATGTTGTTT
TATTGTTCAGAGTTCGGTCTGCTCATAACAAGATAACAGTTATTGGTTTA
TCATTTTGTAGTTCGTGTACTGTACTTTCATATGAGAAAACAAAGCAAAC
AAAGACATGCCTTGAGTTTGTCACTTCCCAGTACACACGTCAAGTACCCC
TTTTAAAAAATACAGCCCAAAGTCTTCTGCAATCATCTGACCCTTTTCTG
ACGCCCTATCTTAAATTACACGTTACTTGAATTTCAAAAAGGCATTAAAA
TGTATTCTTTTGTCGAAATTTCGTGATACGGATAGGTTGTTTGTTGTAGT
GTTATACCTTCTATACTTCACGATTAACTGCTGTTGCCAGATAGCCTGGG
GAAGTTTACCTTGGGCTGATAACTTGTGCGTTTTCCAGCCCCTTTTCTCA
TACATGCAAGTTTCAAGACTTGCTTTAAGTAATTTTCACAAACATAACTT
TTCTCTTCAGGACGAATTGACGGACGACGAAACGTTTAGAGAAAGACATT
CGCGTTGTGAAGTCACAGAACAGAAGCGATTCACGGATTATTTCCAACCA
GTTCGACGACAACGCTCCGTTCGAACGATCAGCGAAGGACCAAACTCAGA
ACCTCCTTCTCCGCACATGATCGACGAGCGTTCTCTTGTCAACACGCCCG
TCGAATCGCCCAACCCTCTGAAAATTCTCCAGAATCGATTAGCAAATGTT
TGCGAATGCACGGAGGCTGAGCGTGACTTGCCTTGGTTACCTCGGAAATT
CCCCTTATCAGAACTTGAAACTGTGAAGTTGGAGGTGTTCAGTGCACCGC
CTTCTCCTTGTTTTGGGGAGCCACCGAAACGAATACCTAAGCCCTCGTCT
TTATCCCGATCTTCTTCGTACACACACCTCGCGAACATTACGCCACGAAA
TTCACCTATACCTTCAATGTCACCTCTCGCCAGCCCTCCTACGCCTGAAT
CTAATTGGACAGTCAAAGTTTTGAACAATGCGGACAATCAAGACATGCCT
ACGGTGCATGCGCCGACGTTGAATGATAAGCAGCAACGAAAAGGCATTGT
TTTGAAACTTGCCAAAAAATGACATTTGGCATTTTTAAGAAATTTTCTCG
GAATTTTTTTTCTCGATAGTTCATATTATCTGATCTTTTCTTTTTTTCTG
AAAGATTTTTCCTTTGTACAATTTTGTAAATACTTTATTCCAGTTATGTT
TTCTCTCTCTTTTCCGAACTGACTTATATATTCTACAAATAAGCTATTAA
AAGATAAGACCAGAGAGATGTGAAGAAGAAGAAAAAACATAAAAAAATCT
AATAACAGAAAGAAAATAAAGAAAAATGAACACAAGATTTTTATTCGGTT
TCATTCTTATCTTATTTCGTAATTATTATGTCCA

Coding sequence (CDS) from alignment at scaffold_58:1439163..1449946-

>TCONS_00071064 ID=TCONS_00071064|Name=TCONS_00071064|organism=Clytia hemisphaerica|type=CDS|length=2409bp|location=Sequence derived from alignment at scaffold_58:1439163..1449946- (Clytia hemisphaerica)
ATGGCTCCGGCTTTGGTTGAGCTTTCTACTTCTAAGGAGAGGAACTCCAG
TAGTAAGAAATACATAGAAAATTTTTCTTGCATGTCTCGTTTGAACCTTG
AACTGGTTGACAAGATAAGATTTGTTGACTCTTCTCCCTTGTTTACATGT
GACATTGACAAAAAAGTTAATGAAAATTTGAATTCTAAAGAGTTCATTTC
TCAAGTAATGGTTTCACATGAAAGTGAAAAAACGCCAATCAGCAACAGAA
ATGGAAATCTGCATAAAGTAATCAAAGAGGAAGTTATTTTGAACCTGAAA
AGTGAATCATTCAAAAACCAAAATTCTAATAACCACATCAAGCAAAATGG
ATGTGCTGACTTGATACCCCATGTCCAGAAAATTATTGATAAACCAACTT
GCTGTGCAACTACGATTGATGTCAACCGGGAACCGCAACCAGTTGCTGAA
TTTAAGCCGACATCGCAAATCAAACAACTTCTCAAATCGAAAGAACAATC
CATCAGCAATAATTTTTCCTATATTGACAATAATCTCAATTCATTGAATG
AACGTCTGAAAAGACTGACGTCAAAAAGTTTATCATCAAATGTTGCTTGT
TTTGTCAGTAAAAGTAAAAAAGTCTTGAACTATCACGACAAGCCTAAAGA
AAAGGATTACAAGAGTTGCAAGACTGATTTTAGCGAATCTAAGTCATTAC
CGCTTCCTTTAAAACTTTCATATGACGTTCTTCCTGACCCAATCACTGAT
AATGAGGATGATCTAGACGTAAAGCAACATATTCCTTTTGGTGGAAAGCG
ACAAAAAAGCTCTAGACCAGCCCCACCTTCAAATGTTCTTCATCAATGGA
AACAAAATCGTGCCAAGATTGGGTCCCAATGCTCCTGGTTAACACTCAAG
ATGGCCGCGCTTGATGACAAGATTTCATCCTTGAATAAAGTTCATACAAA
CCTTAAAACCAGCAGAACTGTGAGAAACCATACATTTGACGAAGCAGCAA
AAAGACAAGTGCAATTGAATAACAGAAATGGACTAAACGACACGTCTCAG
GCAGATTGTGGTTGTAGTAGAACAAGACCATTACTTAATAGTCAATATCA
CAAATATTTACGACAAAACAAATATATCCCACAGACTAGCAATCAAGACT
CGTATTCTTGTCATTGCATTGGAGGAAGCGCTGGCTGTCGATTTTGTACA
AAACGTTTCAGAATGGATATGTGCTCTCAAACGAAAGTTGAACTTGATCA
AAATTATCATCCAATTCTATCACAACAAAGTGACGTTTCGCTGTCCTACC
TGCTCGAAGAAACGCTTCGGAAGCAAAGAATCAACACCAAAGTGACAATC
ACCAAATCAAAAAAGAAAAAGAAACGACCTCAATCACTGACGACTCATTC
ACCCATCGGAGAAAAAGTTGAAAAAGCATTGAAAGCGAAGAGTAAATCGG
AGCGCTCTAAATCAGACGAATATTCAAGAAAACGTTACGCGGCATCTGAC
ATTTCGAGCAAACTAAAGAAGTTTCGTAAGCTTTCCGAATCTTGTGATAG
CGCATCCAAGCCTTCGACACCGACCAACGAGCTCGCGAGTCCTTTATCAC
AAAGTCTTCCGTCGACCGGTTTGTCTGGTCTTAAGAAGAAGAAGGGAGCG
AGCGCCAACTACGACATTGATAATATCGTCATCCCCTACTCGATCGCGTC
ATCTACTCGTGTCGAACGCATTCAATACAAAGAAATCCCCACGCCTGGAT
GGAGAGCAGCTAACGATCTGCTGAACAATGACGAAATAGATTTAGAAGAC
GAATTGACGGACGACGAAACGTTTAGAGAAAGACATTCGCGTTGTGAAGT
CACAGAACAGAAGCGATTCACGGATTATTTCCAACCAGTTCGACGACAAC
GCTCCGTTCGAACGATCAGCGAAGGACCAAACTCAGAACCTCCTTCTCCG
CACATGATCGACGAGCGTTCTCTTGTCAACACGCCCGTCGAATCGCCCAA
CCCTCTGAAAATTCTCCAGAATCGATTAGCAAATGTTTGCGAATGCACGG
AGGCTGAGCGTGACTTGCCTTGGTTACCTCGGAAATTCCCCTTATCAGAA
CTTGAAACTGTGAAGTTGGAGGTGTTCAGTGCACCGCCTTCTCCTTGTTT
TGGGGAGCCACCGAAACGAATACCTAAGCCCTCGTCTTTATCCCGATCTT
CTTCGTACACACACCTCGCGAACATTACGCCACGAAATTCACCTATACCT
TCAATGTCACCTCTCGCCAGCCCTCCTACGCCTGAATCTAATTGGACAGT
CAAAGTTTTGAACAATGCGGACAATCAAGACATGCCTACGGTGCATGCGC
CGACGTTGAATGATAAGCAGCAACGAAAAGGCATTGTTTTGAAACTTGCC
AAAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044149XLOC_044149Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071064-proteinTCONS_00071064-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071064-exon-scaffold_58-1575043694:1449591..1449946TCONS_00071064-exon-scaffold_58-1575043694:1449591..1449946Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1575043694:1447981..1449379TCONS_00071064-exon-scaffold_58-1575043694:1447981..1449379Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1575043694:1444295..1444761TCONS_00071064-exon-scaffold_58-1575043694:1444295..1444761Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1575043694:1442727..1442814TCONS_00071064-exon-scaffold_58-1575043694:1442727..1442814Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1575043694:1442460..1442503TCONS_00071064-exon-scaffold_58-1575043694:1442460..1442503Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1575043694:1442094..1442186TCONS_00071064-exon-scaffold_58-1575043694:1442094..1442186Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1575043694:1440700..1440989TCONS_00071064-exon-scaffold_58-1575043694:1440700..1440989Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1575043694:1439163..1440086TCONS_00071064-exon-scaffold_58-1575043694:1439163..1440086Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1449591..1449946TCONS_00071064-exon-scaffold_58-1510915933:1449591..1449946Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1447981..1449379TCONS_00071064-exon-scaffold_58-1510915933:1447981..1449379Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1444295..1444761TCONS_00071064-exon-scaffold_58-1510915933:1444295..1444761Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1442727..1442814TCONS_00071064-exon-scaffold_58-1510915933:1442727..1442814Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1442460..1442503TCONS_00071064-exon-scaffold_58-1510915933:1442460..1442503Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1442094..1442186TCONS_00071064-exon-scaffold_58-1510915933:1442094..1442186Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1440700..1440989TCONS_00071064-exon-scaffold_58-1510915933:1440700..1440989Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1510915933:1439163..1440086TCONS_00071064-exon-scaffold_58-1510915933:1439163..1440086Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1449591..1449946TCONS_00071064-exon-scaffold_58-1491911889:1449591..1449946Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1447981..1449379TCONS_00071064-exon-scaffold_58-1491911889:1447981..1449379Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1444295..1444761TCONS_00071064-exon-scaffold_58-1491911889:1444295..1444761Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1442727..1442814TCONS_00071064-exon-scaffold_58-1491911889:1442727..1442814Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1442460..1442503TCONS_00071064-exon-scaffold_58-1491911889:1442460..1442503Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1442094..1442186TCONS_00071064-exon-scaffold_58-1491911889:1442094..1442186Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1440700..1440989TCONS_00071064-exon-scaffold_58-1491911889:1440700..1440989Clytia hemisphaericaexon
TCONS_00071064-exon-scaffold_58-1491911889:1439163..1440086TCONS_00071064-exon-scaffold_58-1491911889:1439163..1440086Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1439163..1449946 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.6082	16.5666	6.29412	4.47417	61.4817	45.352	53.7016	57.3725	33.011	38.9144	36.5538	30.4086	30.3268	31.5039	25.7756	35.4865	42.3415	39.4014	31.5377	27.7013	31.0775	35.5764	59.8546	52.9522	45.2689	49.9984	28.952	30.2596	47.1331	53.4242
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029332PEHE_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071064 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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