TCONS_00071147 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00071147
Unique Name	TCONS_00071147
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3415

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_6:185222..193183+
coding sequence from alignment at scaffold_6:185222..193183+

transcript sequence

>TCONS_00071147 ID=TCONS_00071147|Name=TCONS_00071147|organism=Clytia hemisphaerica|type=transcript|length=3415bp
ttgcaaacaaaattatggaAAATTGTATTGACAAAGTAAGAAGACCTACA
GCAAAATCATAACCATGGGAGAATCCAAAGAAGACAGTGACAACATGGAC
GAATATCATTTTAAAAGAAGGATTTTACGTATCAAGAACGTCCCGATGAG
CTTCGCTAATGTTTTGGCGAGCAAACTTATTCATCTCAAAGCAACACAAC
TACGTCATAAAGACGAACAACTATTGATCGAAGTGGTTGGAAATTCTACA
TTAACCGATGATTCTATTTTGCGAACATTGAACATTATGAATCACTACAA
ACAGAGAAATGAGACTTACCGCAAAGATGAGATCGATATCAAATCACCCG
TGGTTCTCTTCACCAATCTTCCCAGTGATACGGATGAAGATATGATGCAA
ATGGCCGTTCAAAAATTTGGTATCACCCTTAATACGTTTACATTTATCAA
ATGGAAATCAGTGACATTCTCCAGATATGGTTATGTTCATTATGCTGAAT
TAGAATCTGCTGAGAACTGCATCAAACATTATCATACAAACCAGTTAAAT
TGTTCAAGATTATATTGTTGTTCCTTACCTATATGCATCACGTCACTTGA
AGTGCTCAAAAAGTGCACACGCTTCGTACAGGTGGATGATATCTCTCGGA
TaacgaaaaagaaaacgaagaatATTTTGAAGAATGCGTGCCCACATATT
GATGAAGAAATTGAACGATATATAaGTAAACGTTGGGAGATAACTGAAGA
CCAAAAATCTTGTTCTCTGATGATTCAATGGCCAACTAGTGCTCATGCTC
TTACTTGTTTCAACCAAttcgaaaattacaaaaacaacCATAAAGATATA
TCATTGACAGTACCTCAGGATGTGGATCTACAAGAAGACTTTGATTTCTG
TCTTGCATTACCGCAACCGAAAATTATCCAATACTTTGTGAAGGAATTAG
AACACAGGATGATCAACATTGACGAAGAAAAGACTCATTGCAATATTATA
TTACCAATGGCATCAAACAACTCTAGacagCCATATCCCCAACAAATACC
GCAAATTTCTCCAATCTATACCCTACCTTCAAACCATGGCATTATTCGTC
CACAGCCAGCATCCAGACCTCTCCTTCGAGGTCCTTTCTATTGCACGGTT
AACCCTGCACAGGAGCCAACACCCATCTATGTCCAGCATCCAGAACCAGC
AATCACCCAAACAATGATGATGGCTAGACAACAACATCTTCAGCATCTCC
ATCAACAGCAACAAGCTCAAAAAATGTCTCAAGGTTTATTGGGTTCTCCT
TTAACCAGACATGCATTTCCTGGTCAACCGCAGTTTAGACAGCTTCCTCC
TGGTCTTGTGCACCATAGACCTCCAGTTTCTGGTCAAGCGCTACCAAGAC
AGCAATCACCAGGACAAACCCGGCCAAAACCTCCACTTCTTGGATCAAAT
CATATACCAGTCACTGGCCAAATGCATCCGAATCATTTCAACTTGGTTAG
ATTATCAAACTTCCAGCAACAAGGTCATCCTGGTCCAATCAACCAACCAT
TAGCTGGTCAAAGACCCCCAAATTCCGGTCAAGCTGGACCTATCCCACAT
CAGCACCACGTCAGTGCTAAATTTTGGACACACAATAACCACCAACACGG
GCCAAACAACCACCAACCGACTCAAGCCCAAAGCCCTACCTCCCCTATCC
GGCAATTGGTTCGCCAACATCATCAGCAAGCAAATGCAGCTACCAAAGCC
TCTCCTGAAAAGTCTTTACCTCCAAGGTCACAACTTATTGATGATGAATC
TCCGGTATCTCCTAATCGACCAATCGATAATATGATTAGCAAAATGTATC
AGAATGCAAATGCAATAATGACAGGTACACCGCCAGATGTCCAATCGACG
GCTTCAGATGGCTGGGGTAGCGGTAAATCAAGTAAACGTTACAGCGTTAT
GAAGAAATCTGCAACGAAAGCGACGATGAATCTCAAAATAGATAGTGCAG
ATGGCAAAGAACCATTAGAAATTCCTCAATACAAGCTGGCAACCAATGGG
TTACGGCAATCTGGATCTCCGAATATCTCTCAGGAAGACAACAAATGTCC
TCCTAAGAGATTACAAGATGAACGATCGAATCCATCTCAAAATATGAGGG
TAAAAACAAATCAGCAATTTGTAAATATTTATCCTGGACACTCTAGAAGA
TTGCCAACACAAGGAAAACATCAAACAGAAGGGATTCTCCCTTCGCCAAA
ATCGCAACTACCTCAGCAAGGTATAAAACAATCTTCCGAAGCGAAtcata
acgttatatggacgttcgGTCAACAACAATATGATAAACCTTTGTTTCAA
TATTGTCCTGTACCAAAGATGAGGTCCTTGGACCAGCAAATGGAGCCTGA
AAGGGACGAGGAAGGGAGCCGTTTCCTTACGCACATTATGACGGAACATA
GAAGAGTTGAGAAAGAAAAGATCGATTGTGGTGGAGTTGATTCTGACGAA
AAACAAGACCAGACGGGTCAGCAAATTAAGGAAGAAAGGAATAATTCTGA
AAAAAGACAAATTGTCTCGTCAGAAACGCCGTTCAAATGGTCAAACGCGA
CAAAACAGATGTTTGGCcggttgttttgatttgtttgacTTTAAAAAGTT
GTATACAGTGCGAGTTTTGTCTAGCAGCGGGAATATTTGTTTTTGAAGGA
TTTGATTTTCATTACTAGTTTAATGGTTGGGAGTTTTGTCTAGTAGTGGT
AATGTGTTTTTGAATATATGTTTAGTTCCATTTTTTTGTCCAGCATCTAG
CACTTGAGGAGTTTTGTCTGGCATTGTTCCAAAGTGTTTTTAATAATTCT
TCTTAGCCCTTGCATGTTTAGGTGCTGGTTTGCTTGAGTGAGTAACTTGc
gctaatttttttaaatctgttgTTTAAATTGTAATGGTTGTATTTTGTGT
TACGAATTTTAGTTACATAATGTTGATTAATTGTGTGATACATTTTATTA
TATCAGGTATTGGgcctttcaagaaaaaaaaatgaatatgggggtggagg
atttaacttttttttggatatttacccccggacatagTGAATCATGACCC
CCGGACAACAGATCTTACCCCCCGGAAAAGCATCAATTGACCCAAtcgac
attcaaaattacccctaaacagagcaaatttgccccaaaaacaaagcaaa
cttTGCAGATTTTTAACTACCctcggacaaaatatccaatatatcctcca
cccccacatacaaaaattttctggaagagcccattcaaACACTTAGGTGA
AGTTTGCTATTTAGTTTATTTGTACTTAGGACTCATACTATACGTAATAT
ACGGATACATGGTAACTATTCCACTTACATCCACACTAACCTGGTACTCT
GTCACTGTATGGAAT

Run BLAST on NCBI

protein sequence of TCONS_00071147-protein

>TCONS_00071147-protein ID=TCONS_00071147-protein|Name=TCONS_00071147-protein|organism=Clytia hemisphaerica|type=polypeptide|length=854bp
MGESKEDSDNMDEYHFKRRILRIKNVPMSFANVLASKLIHLKATQLRHKD
EQLLIEVVGNSTLTDDSILRTLNIMNHYKQRNETYRKDEIDIKSPVVLFT
NLPSDTDEDMMQMAVQKFGITLNTFTFIKWKSVTFSRYGYVHYAELESAE
NCIKHYHTNQLNCSRLYCCSLPICITSLEVLKKCTRFVQVDDISRITKKK
TKNILKNACPHIDEEIERYISKRWEITEDQKSCSLMIQWPTSAHALTCFN
QFENYKNNHKDISLTVPQDVDLQEDFDFCLALPQPKIIQYFVKELEHRMI
NIDEEKTHCNIILPMASNNSRQPYPQQIPQISPIYTLPSNHGIIRPQPAS
RPLLRGPFYCTVNPAQEPTPIYVQHPEPAITQTMMMARQQHLQHLHQQQQ
AQKMSQGLLGSPLTRHAFPGQPQFRQLPPGLVHHRPPVSGQALPRQQSPG
QTRPKPPLLGSNHIPVTGQMHPNHFNLVRLSNFQQQGHPGPINQPLAGQR
PPNSGQAGPIPHQHHVSAKFWTHNNHQHGPNNHQPTQAQSPTSPIRQLVR
QHHQQANAATKASPEKSLPPRSQLIDDESPVSPNRPIDNMISKMYQNANA
IMTGTPPDVQSTASDGWGSGKSSKRYSVMKKSATKATMNLKIDSADGKEP
LEIPQYKLATNGLRQSGSPNISQEDNKCPPKRLQDERSNPSQNMRVKTNQ
QFVNIYPGHSRRLPTQGKHQTEGILPSPKSQLPQQGIKQSSEANHNVIWT
FGQQQYDKPLFQYCPVPKMRSLDQQMEPERDEEGSRFLTHIMTEHRRVEK
EKIDCGGVDSDEKQDQTGQQIKEERNNSEKRQIVSSETPFKWSNATKQMF
GRLF

Run BLAST on NCBI

transcript from alignment at scaffold_6:185222..193183+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00071147 ID=TCONS_00071147|Name=TCONS_00071147|organism=Clytia hemisphaerica|type=transcript|length=7962bp|location=Sequence derived from alignment at scaffold_6:185222..193183+ (Clytia hemisphaerica)
ttgcaaacaaaattatggaAAATTGTATTGACAAAGTAAGAAGACCTACA
GCAAAATCATAACCATGGGAGAATCCAAAGAAGACAGTGACAACATGGAC
GAATATCATTTTAAAAGAAGGATTTTACGTATCAAGAACGTCCCGATGAG
CTTCGCTAATGtaagatttatttttttgttatagGGAAAGTTTTATTTCT
AGTGTGGAAACTTAGTTGCCGTTACAGGCTGTTTAAATCTAAACTGATTC
CTCATTTCCAGTGAAGACGGCTTTCTACGTAATACAAATGGAGGGAACAT
TGAATCAACTCGAGGAGGGTTCAACATTTTTGACGGAGAATCTTTACATT
TCCTTATAAGGGGTATGGCTAAAAGAAATACTCTACAGGCCCTCTTACAC
GGAGCAATAATGAATTAAGATAAGATTTAAAATAATCACGAAACGATAAT
ATTATCTTATTGTGTCGTGTATCAAAGTTTAAAATGATAAAAGCACTATC
TTGATGACGTCGAAAATCCCATTGTTCCGATTATTGTAGAGAAGTCGATT
ATAATCAAACTAGTTTGATTATAATCGACGAGCTTAcgatattcaaaaca
aaagaaaggaagaaaattctaTTGATTTGGCtatgtaaacaaaaatattc
caTTCATTTGATCATTCAGCTAGTGTGTTTTGtgttgtatttttttgtga
aattattaaaaagtgaTAGAAGACACAAGTTCATTTCTCGAACTTGGCTA
GCTACGGTTATACGCGTTGTTTTTGTCTCCTCTATTTCGTTGCAATTCGA
GGAAAGCCAAGTCAGCTAAATTTTGCTCACGCTATGCTCCTTTCGGTTAC
TTAACCGGTTTCTTCGTTGACTTCGTCGATAAAGCCCTCTGGTGTATAAG
AGTCGGTCCCGGGGggagtgggtttaccaactgacggtatgtgcggcgaa
aaaattggcttttagaatcgcacccttacagtgcagaaaaaaatcgcaat
ttgcaatttttcccagatttgctgaaatttccacccttacagtgcatttg
tcaaaagtccacccttacagtgcatttctgatattttgaaaaacataccc
ttaaccgccgcacatacccgtcggtcaatttgtctgactgcccccccccc
ccggggggccGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCGGGGA
GTCGGTTGAGATTTCCCTAAGCATATTATGAATAACAAGTGAAGCTAGTG
TGATCGTTACAGCCTTGCCAGGGTCAGGTGGGATTTTGGTAAAAAGGATT
CGAAATCTACTTGCCAAAATGCCAAATGCATTTTCAGTAACTCTCCGGAA
ACGAGGTAAACGATAGTTGAACACGCGAATTCTAAGTGTAAGGCCTTGTT
GACTGTAAGGTTTGAGACAGTGAATACCCAAAGGAAAAGCTTCATCTCCA
ACAAATACATAGGGAACAGGGACTGATTCATGATTGATGTAATTGGGATC
GTTAGAACTTGGCAGTAATCTTGGCTCGGGAATAACTAGATTGCCGCTTT
CTAATGCCTTGTAGAAGGAACAATTTCGATTAAAGCCCCCGTCACTAATA
CGCCCTTGAcagccatctttttctcttttcttcacttttcttttcaaaag
ttcAGCACTACAAACGATCACAAGAGCTGCAAAAGCAGCAGCACAAACCT
TCTCCTGCTTATCCATCCCATCCATTATTGTATTGGAGGATTATTGCTCT
GtgtatcaaatcaaaaacatttagaaaGTATAATACAGAAAGATATTGAT
TATTGTTATCTTTACGtgtatgaaaatgtaaaaataataaattcttaTCT
TATCTTAATTCATTATTGCTCCGTGTAAGAGGGCCTTAcgtcataaattt
tgaacccCTCTTAAATTCGCCACTGCAACTGGGCGTCATTAGGTGACTAT
TTGAACAGTAATTGAGTTGTGCTAATATGTGAAATTTTTATCAACACCAT
AGGTTTTGGCGAGCAAACTTATTCATCTCAAAGCAACACAACTACGTCAT
AAAGACGAACAACGTAAGTAAAAATCATGTCTGGATTTTGGGATGCTAAG
AATTTAAAAGAATTGATATAGCCTCATCTCACTGACCTGGAGAGAATCTG
GAAAGTTGCTAGGATTTTCACACGATTTTTGGGATATCCTAGcaacgaaa
aaataaatgatatcATCGGCGAGTGCATTTTAATGTGGGAATGTGCCACC
TGGTGAGCTGATACTTTATGCAAAGCAAGCTAAGTGCTGGAGTGAAATAA
GACAACAAGAATTTCTTGGGTTTTCAAAAGAACCTACCTATTCAATAGCT
AGTTTCGAGGATACTAAAATAACATTCCTGTACTccaaaaaacaaccaaa
ttCCTATCCTTTAGTATTGATCGAAGTGGTTGGAAATTCTACATTAACCG
ATGATTCTATTTTGCGAACATTGAACATTATGAATCACTACAAACAGAGA
AATGAGACTTACCGCAAAGATGAGATCGATATCAAATCACCCGTGGTTCT
CTTCACCAATCTTCCCAGTGATACGGATGAAGATATGATGCAAATGGCCG
TTCAAAAATTTGGTATCACCCTTAATACGGTAAGAAAAAGATCCCAAGCA
TAGTCCCTAGTCTCTTTATTCAAGCTTTGAAAAACTCTGGACTCAAACAA
ACCCAGATTTCGAAAATAATCCCAAGTTTAGTCTCTAAATGTTCTGTGTT
TTTCATCTTAGAGCTTTTGTAACACCCCGTATTAGCCCCCCTCCCGTATA
TACAGACCTAGTATAGTTATATTTCAGTTATATAAGCCATTCAAACAAGT
GGATCCTATTTACCTCCTTCATTGTATACCTACTGGATAAAGAGTTCTCA
CAGAGTCATTGAAACAGGGGCGTTGTCTGTTGAGAATAATAACCATCGAG
AACTCACTGATCTAAACGTTTGTCAAgagggccattccattttatatcca
tataGGGGGTGGCAGGGGGTAACTCGTGCAGAATTTCCATGGGgtctaaa
aaagattttaagagattttttttttcattttccagggaTAATAATATTAA
AATTTCAGGGGGTAAAGGGTAAAAggctgattttagttcgtccaccatca
ctttaaagatatgaaaataaattttccatgggttttcttttttaaatctt
gccATTTTTCCAGAGGGTAGccacacatttccaagaaacattttatggct
taaaaaggttcgtccacctcCCTGTATagaaatttaatggaatggcCTAA
TTCCTTCGAAATTTCAGAGGGGATATAAGTATAACTAGGTTGTCAGAATT
ACAAGAGAGTAGATTCTCAAACAAGGCTTGTATTTTACCTAGTCCATAAG
AAAATAGGGATGAAATATGAAATCTGTcaatagactttttcataaattac
gtcacgagcaacgtGTAAGATGTTTACTCACTTGTAAAGATAACACTTGA
AGACTCGTGGGATTCAATCACCTTGATAGTTTCCAAACGAGGCAGACGTT
GcgctcattgagtttaaagtccgaagggctagagcaGAATCTCTAACcat
tcccaggcaagaaaaagtgctTATTTCTCATCCAAAATCCCTCAAACGCG
TCATAATCACCGCCACACGAGGACGTTCTGGATGGGatataagtggcttc
atttccagGAGTCTCCAGTCTGGTCCTTCAAGCTTGGAGGTCAATGGTTG
CGCTCagaataatttatgaaaatgtctatATGGAAATACTAAGAGAATTC
TTCATTCTATTTACAGTTTACATTTATCAAATGGAAATCAGTGACATTCT
CCAGATATGGTTATGTTCATTATGCTGAATTAGAATCTGCTGAGAACTGC
ATCAAACATTATCATACAAACCAGTTAAATTGTTCAAGATTATATTGTTG
TTCCTTACCTATATGCATCACGTCACTTGAAGTGCTCAAAAAGTGCACAC
GCTTCGTACAGGTGGATGATATCTCTCGGATaacgaaaaagaaaacgaag
aatATTTTGAAGAATGCGTGCCCACATATTGATGAAGAAATTGAACGATA
TATAGTAAGTCTTCCTTagcttgaaaactaaaaaaacaccTCATGATAAA
TTTCAGCAGTGCCGAAGGAAgcatttttttttgggggggggctcGAGTGA
GTTACAGTACGTCCAATTTTGTGTTGGAATCATTGGGTGTATGAATGAGT
ACCCCAATATGAGCACTATTGGGTTGCATTGAAGCTGGACACGCCAATTC
GCCCGAGAGGCTTCTGCATTGCTTGAAAATACACCAAAATCAATGAATTT
AAGCAAActtaactttaattttttgaatgGTCGTCTTTAACAAgccatct
ttgaaaaaattatttgtggGAGGGCACCATTGTCCCACCCCGGTCGCTAC
GTCACTGTTTAAAAAGGAGGAACATAGCATAAGTAAATTGCGACTGTATT
TATTTGCACTAGTTAAGCAAACATTCATATGAATATAATGCGAATTGGat
tattatttcatttttcaatagaGTAAACGTTGGGAGATAACTGAAGACCA
AAAATCTTGTTCTCTGATGATTCAATGGCCAACTAGTGCTCATGCTCTTA
CTTGTTTCAACCAAttcgaaaattacaaaaacaacCATAAAGATATATCA
TTGACAGTACCTCAGGATGTGGATCTACAAGAAGACTTTGATTTCTGTCT
TGCATTACCGCAACCGAAAATTATCCAATACTTTGTGAAGGAATTAGAAC
ACAGGATGATCAACATTGACGAAGAAAAGACTCATTGCAATATTATATTA
CCAATGGCATCAAACAACTCTAGGTAAATCACATTAATGTCAAACATGGA
CCCAGTCTCCtagttcacttttttacaactcgggtacactgacctttata
tatccctggaccaagctatatccgccatctttgatcgaagtcttttgaaa
gttggtactcgcaaagaagctattgtagtgTTTAAAACTTTGTctaacga
caaacggcgctacattaTTAGGGTACAAGTAAAGCAAGATCTAACGCTCT
CTCCGCGGATACCAATTTCAAagaaactccgatcaaagattttgcttggc
cggcattgagaaaattggtccagggatatataaaggtcagtgtccAGGTA
GTGCTTTTGAAAGAGTTGCATTATATCCATGGGTGAAATCAAAAAGTTAT
GCAAGTAGGTACGAGATTATTATATAGTTGGCCCACTTGGCAATTTGGCA
TTGCTTCAATGATAGACACAATTATTGTTGATAGAGATTGAAAACTTATA
AGATAGATTTTATGTTCTTTCAACATTTAAGACCACGCGCATTAACTAAC
AGAATGGTTCATTTCGTtttggagcgaaacggaaccgtagcgtAAGAACG
TGGCCTTGTAGAGCCATAGAGAATtagcaaatagagcaggattacTGATT
AAtcgaaataatttatttttcagacagCCATATCCCCAACAAATACCGCA
AATTTCTCCAATCTATACCCTACCTTCAAACCATGGCATTATTCGTCCAC
AGCCAGCATCCAGACCTCTCCTTCGAGGTCCTTTCTATTGCACGGTTAAC
CCTGCACAGGAGCCAACACCCATCTATGTCCAGCATCCAGAACCAGCAAT
CACCCAAACAATGATGATGGCTAGACAACAACATCTTCAGCATCTCCATC
AACAGCAACAAGCTCAAAAAATGTCTCAAGGTTTATTGGGTTCTCCTTTA
ACCAGACATGCATTTCCTGGTCAACCGCAGTTTAGACAGCTTCCTCCTGG
TCTTGTGCACCATAGACCTCCAGTTTCTGGTCAAGCGCTACCAAGACAGC
AATCACCAGGACAAACCCGGCCAAAACCTCCACTTCTTGGATCAAATCAT
ATACCAGTCACTGGCCAAATGCATCCGAATCATTTCAACTTGGTTAGATT
ATCAAACTTCCAGCAACAAGGTCATCCTGGTCCAATCAACCAACCATTAG
CTGGTCAAAGACCCCCAAATTCCGGTCAAGCTGGACCTATCCCACATCAG
CACCACGTCAGTGCTAAATTTTGGACACACAATAACCACCAACACGGGCC
AAACAACCACCAACCGACTCAAGCCCAAAGCCCTACCTCCCCTATCCGGC
AATTGGTTCGCCAACATCATCAGCAAGCAAATGCAGCTACCAAAGCCTCT
CCTGAAAAGTCTTTACCTCCAAGGTCACAACTTATTGATGATGAATCTCC
GGTATCTCCTAATCGACCAATCGATAATATGATTAGCAAAATGTATCAGA
ATGCAAATGCAATAATGACAGGTACACCGCCAGATGTCCAATCGACGGCT
TCAGATGGCTGGGGTAGCGGTAAATCAAGTAAACGTTACAGCGTTATGAA
GAAATCTGCAACGAAAGCGACGATGAATCTCAAAATAGATAGTGCAGATG
GCAAAGAACCATTAGAAATTCCTCAATACAAGCTGGCAACCAATGGGTTA
CGGCAATCTGGATCTCCGAATATCTCTCAGGAAGACAACAAATGTCCTCC
TAAGAGATTACAAGATGAACGATCGAATCCATCTCAAAATATGAGGGTAA
AAACAAATCAGCAATTTGTAAATATTTATCCTGGACACTCTAGAAGATTG
CCAACACAAGGAAAACATCAAACAGAAGGGATTCTCCCTTCGCCAAAATC
GCAACTACCTCAGCAAGGTATAAAACAATCTTCCGAAGCGAAtcataacg
ttatatggacgttcgGTCAACAACAATATGATAAACCTTTGTTTCAATAT
TGTCCTGTACCAAAGATGAGGTCCTTGGACCAGCAAATGGAGCCTGAAAG
GGACGAGGAAGGGAGCCGTTTCCTTACGCACATTATGACGGAACATAGAA
GAGTTGAGAAAGAAAAGATCGATTGTGGTGGAGTTGATTCTGACGAAAAA
CAAGACCAGACGGGTCAGCAAATTAAGGAAGAAAGGAATAATTCTGAAAA
AAGACAAATTGTCTCGTCAGAAACGCCGTTCAAATGGTCAAACGCGACAA
AACAGATGTTTGGCcggttgttttgatttgtttgacTTTAAAAAGTTGTA
TACAGTGCGAGTTTTGTCTAGCAGCGGGAATATTTGTTTTTGAAGGATTT
GATTTTCATTACTAGTTTAATGGTTGGGAGTTTTGTCTAGTAGTGGTAAT
GTGTTTTTGAATATATGTTTAGTTCCATTTTTTTGTCCAGCATCTAGCAC
TTGAGGAGTTTTGTCTGGCATTGTTCCAAAGTGTTTTTAATAATTCTTCT
TAGCCCTTGCATGTTTAGGTGCTGGTTTGCTTGAGTGAGTAACTTGcgct
aatttttttaaatctgttgTTTAAATTGTAATGGTTGTATTTTGTGTTAC
GAATTTTAGTTACATAATGTTGATTAATTGTGTGATACATTTTATTATAT
CAGGTATTGGgcctttcaagaaaaaaaaatgaatatgggggtggaggatt
taacttttttttggatatttacccccggacatagTGAATCATGACCCCCG
GACAACAGATCTTACCCCCCGGAAAAGCATCAATTGACCCAAtcgacatt
caaaattacccctaaacagagcaaatttgccccaaaaacaaagcaaactt
TGCAGATTTTTAACTACCctcggacaaaatatccaatatatcctccaccc
ccacatacaaaaattttctggaagagcccattcaaACACTTAGGTGAAGT
TTGCTATTTAGTTTATTTGTACTTAGGACTCATACTATACGTAATATACG
GATACATGGTAACTATTCCACTTACATCCACACTAACCTGGTACTCTGTC
ACTGTATGGAAT

Coding sequence (CDS) from alignment at scaffold_6:185222..193183+

>TCONS_00071147 ID=TCONS_00071147|Name=TCONS_00071147|organism=Clytia hemisphaerica|type=CDS|length=2565bp|location=Sequence derived from alignment at scaffold_6:185222..193183+ (Clytia hemisphaerica)
ATGGGAGAATCCAAAGAAGACAGTGACAACATGGACGAATATCATTTTAA
AAGAAGGATTTTACGTATCAAGAACGTCCCGATGAGCTTCGCTAATGTTT
TGGCGAGCAAACTTATTCATCTCAAAGCAACACAACTACGTCATAAAGAC
GAACAACTATTGATCGAAGTGGTTGGAAATTCTACATTAACCGATGATTC
TATTTTGCGAACATTGAACATTATGAATCACTACAAACAGAGAAATGAGA
CTTACCGCAAAGATGAGATCGATATCAAATCACCCGTGGTTCTCTTCACC
AATCTTCCCAGTGATACGGATGAAGATATGATGCAAATGGCCGTTCAAAA
ATTTGGTATCACCCTTAATACGTTTACATTTATCAAATGGAAATCAGTGA
CATTCTCCAGATATGGTTATGTTCATTATGCTGAATTAGAATCTGCTGAG
AACTGCATCAAACATTATCATACAAACCAGTTAAATTGTTCAAGATTATA
TTGTTGTTCCTTACCTATATGCATCACGTCACTTGAAGTGCTCAAAAAGT
GCACACGCTTCGTACAGGTGGATGATATCTCTCGGATaacgaaaaagaaa
acgaagaatATTTTGAAGAATGCGTGCCCACATATTGATGAAGAAATTGA
ACGATATATAaGTAAACGTTGGGAGATAACTGAAGACCAAAAATCTTGTT
CTCTGATGATTCAATGGCCAACTAGTGCTCATGCTCTTACTTGTTTCAAC
CAAttcgaaaattacaaaaacaacCATAAAGATATATCATTGACAGTACC
TCAGGATGTGGATCTACAAGAAGACTTTGATTTCTGTCTTGCATTACCGC
AACCGAAAATTATCCAATACTTTGTGAAGGAATTAGAACACAGGATGATC
AACATTGACGAAGAAAAGACTCATTGCAATATTATATTACCAATGGCATC
AAACAACTCTAGacagCCATATCCCCAACAAATACCGCAAATTTCTCCAA
TCTATACCCTACCTTCAAACCATGGCATTATTCGTCCACAGCCAGCATCC
AGACCTCTCCTTCGAGGTCCTTTCTATTGCACGGTTAACCCTGCACAGGA
GCCAACACCCATCTATGTCCAGCATCCAGAACCAGCAATCACCCAAACAA
TGATGATGGCTAGACAACAACATCTTCAGCATCTCCATCAACAGCAACAA
GCTCAAAAAATGTCTCAAGGTTTATTGGGTTCTCCTTTAACCAGACATGC
ATTTCCTGGTCAACCGCAGTTTAGACAGCTTCCTCCTGGTCTTGTGCACC
ATAGACCTCCAGTTTCTGGTCAAGCGCTACCAAGACAGCAATCACCAGGA
CAAACCCGGCCAAAACCTCCACTTCTTGGATCAAATCATATACCAGTCAC
TGGCCAAATGCATCCGAATCATTTCAACTTGGTTAGATTATCAAACTTCC
AGCAACAAGGTCATCCTGGTCCAATCAACCAACCATTAGCTGGTCAAAGA
CCCCCAAATTCCGGTCAAGCTGGACCTATCCCACATCAGCACCACGTCAG
TGCTAAATTTTGGACACACAATAACCACCAACACGGGCCAAACAACCACC
AACCGACTCAAGCCCAAAGCCCTACCTCCCCTATCCGGCAATTGGTTCGC
CAACATCATCAGCAAGCAAATGCAGCTACCAAAGCCTCTCCTGAAAAGTC
TTTACCTCCAAGGTCACAACTTATTGATGATGAATCTCCGGTATCTCCTA
ATCGACCAATCGATAATATGATTAGCAAAATGTATCAGAATGCAAATGCA
ATAATGACAGGTACACCGCCAGATGTCCAATCGACGGCTTCAGATGGCTG
GGGTAGCGGTAAATCAAGTAAACGTTACAGCGTTATGAAGAAATCTGCAA
CGAAAGCGACGATGAATCTCAAAATAGATAGTGCAGATGGCAAAGAACCA
TTAGAAATTCCTCAATACAAGCTGGCAACCAATGGGTTACGGCAATCTGG
ATCTCCGAATATCTCTCAGGAAGACAACAAATGTCCTCCTAAGAGATTAC
AAGATGAACGATCGAATCCATCTCAAAATATGAGGGTAAAAACAAATCAG
CAATTTGTAAATATTTATCCTGGACACTCTAGAAGATTGCCAACACAAGG
AAAACATCAAACAGAAGGGATTCTCCCTTCGCCAAAATCGCAACTACCTC
AGCAAGGTATAAAACAATCTTCCGAAGCGAAtcataacgttatatggacg
ttcgGTCAACAACAATATGATAAACCTTTGTTTCAATATTGTCCTGTACC
AAAGATGAGGTCCTTGGACCAGCAAATGGAGCCTGAAAGGGACGAGGAAG
GGAGCCGTTTCCTTACGCACATTATGACGGAACATAGAAGAGTTGAGAAA
GAAAAGATCGATTGTGGTGGAGTTGATTCTGACGAAAAACAAGACCAGAC
GGGTCAGCAAATTAAGGAAGAAAGGAATAATTCTGAAAAAAGACAAATTG
TCTCGTCAGAAACGCCGTTCAAATGGTCAAACGCGACAAAACAGATGTTT
GGCcggttgttttga

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044225	XLOC_044225	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00071147-protein	TCONS_00071147-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_6	supercontig	scaffold_6:185222..193183 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0663963	0.0431646	0.0250591	0	0.0746159	0.04717	0.0853629	0.119874	0.0373006	0.115507	0.0784797	0.0515895	0.022079	0	0.0251347	0.0269733	0	0.0170293	0.0117635	0.0246192	0.0213986	0.110549	0.0126881	0.034606	83.6906	28.2799	0.0303475	0.0323877	0.110542	0.0375416

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00071147 vs. Swiss-Prot (Human)

BLAST of TCONS_00071147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00071147 (transcript) - C. hemisphaerica