TCONS_00071376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071376
Unique NameTCONS_00071376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2606

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071376 ID=TCONS_00071376|Name=TCONS_00071376|organism=Clytia hemisphaerica|type=transcript|length=2606bp
aaaaaattggcacccaagttattttgattcccctaccccttagctttcca
aaaatgtataacaagtgctttgactagaaaaatcgagcgattttacaaat
ttccccctactattataTTGATAGAGCTGAATGGTAGAATTAGAACATAC
TGTACCTATATAAGAAAACTTTAGAGAATCAAAAATGTGTTGTGGGAGAA
TATGGGATCGAGTGAAATCAATATGTGGGAGAAGTATGTCCTCTACACAA
TTGGTTGAACGAACACCTTTGCCCAAAACCATCATCTCCATTCTATTCGC
TATGTTGCTCTTTAACGCGATGGCAATGACGATGGTCTTTGCATACCTAC
CTAAACTCGTCAAGtcaTTTGGTACTTCAGAAGTAAATACAGGTTACTAT
GCCGGCTTAATTGCTTCTTCATTATTCGTTGGAAGACTCATATTCAGTTT
AGTATGGGGTTACATTGTGGACCTTCGAGGGAAGAAATTCACCGCCATCT
TGTCTGCATTCTGTTTAATGGTCACCACCCTGGCGTTCGGATTCAGTACA
AATTTCTGGTGGGCGTTCATCACTCGCTCTTTACAAGGACTTTCTATGGG
TTTGATTGTGGCATCGAAAGCCTTGTTGAGTACCATTTGCGATGATAGTA
ATATTGCACTGGGAATGTCTATCATTATTTCATCATTTTCTGCAGGCCTC
ATCATTGGCCCTAGTCTAGCAGGATTTTTGGTATTTCCACATCAACAATA
CCCATCCGTTTTCCCAGAAGataACATCTTTTCGAAGTATGGAGTACTTT
TCCCCAACTTCATCATTTTCATCGGATTGTTGGTGACGGTGACCATTGCC
ACGAAGTTGATACCTTCTGATAAAAAAAACAAGAATGAAGAGAAGAACTA
CTTGCTCGATTTGCgaaatgaaaataacaacaaaaagAAGAACTACGTCA
CTCTCAAAGAAGATGAAGATCACCAAACGTTCAAACGAAAAAGTCCTGAC
ACATATCTGGAAGTTTCTATCAAACATCATGATGAATATAAACATAAGAA
TCCTAATATGTTTTATGTTCAAATTGTTGAACCTATTCAAAGTATAACAC
CTTCTCGGCACAACAACACGGAGAACTTAACCTGGAGACAACGATGGGAA
AACTCAAATGTGAAAGAGCTTTTAAGCAACAAATGGTGTGTGTTGACTTG
TGTATTATACGGAACATATTCCCTGGTTGCCATTGGTTTCGATGAAATCG
TTCCTCTATATCTCGCAACGTCCATTGAATATCACGGGATGGCATTTTCA
ACCAGTCAAATCGGAATGGCATTATTAATCGTTTCAATATTTCTAATCAT
CATACAAGTCACTCTGCTCACTTTTttaGCTACAAAGTACGGATCTAGAA
AGATGTTCATTGTCAGTATTTTAATATTGGCTTTTGTTCTACCCTTCCTA
CCAACTATCAGCAACATCAAGAAtagGACAACATTATGGGTTGTGTTATC
CATCTATCTTTTGATATGTCGTGTAGTGATAGCTGGACCCTTCCTCGCAC
TCAACATCTTGATCAACAATTCAGTAGAGGAACATCTTCTTGGCACTGCT
AACGGAATGGCGATGAGCTTGTCTTCTGCTGGAAGAATGATAGCTCCAAC
CATGGTAGGCAGTTTATTCTCATGGTCCCTCACCAACATTAAAGGAGTAA
AAGACAACATCAATCCACTTGGATTCCCATTAAACCAATATTTCCCATTT
CTCATTCTATCATTTCTGGCTATCTTAAACGCTATAATAGCTTCAAGGAT
ACCTGTATCGCTAGACAAAAGTATGAGAAAACCAAAGGATGAGAAAGAGG
ATCTGGATCAACCAGGGAATGTCACCAATATCACTGTTGGTTATTTTACA
CCGAGTCATGATAACGATGAGGCTATAGGTTATTTCACGCCAAGTTATGA
AGAAAAACTCTaggttttgtttatatttgtgcAATGTGGTGTAGACgatg
actttttttcaaatagcTTATTATTTGGCTGGTGGTAcattgaaggaaga
aattttggcggatggccaaaaaagtttttcagagggaattgaATTAGGtg
gttaacttgaaaaattaaatttggcggacgaAGAACATTTTTGTccgaaa
aaggaaaaacctgttttaaagcctgaaatagcacacatttgggggaataa
atagagcaatttaaattaggcgggaatttaatttggcggatgacggaaaa
aattaaattttcttcctttagtGTAGCCTCTATCGGACTCGTGCTCCATA
GTCAAGTACTTCTAGGTCTGATTCAGAATTTCATGGTTTTCGTTTTCTAG
ATATTGAAATTATGATTTCTTTGAATTAGATTGTGGAACTGAAATATCGC
GTCTTTATGACTTTAGTTACAAAAAGAGTACGTAGTGCGAAATAGAAATC
GAGTTATCTTGCTCCTGGAcaatttttgtgactttttaaaatcaaaattt
aactttttgtaTATAAGATAGAAGGTTTATTAGAcgaatatatatatttt
tttaaagaaaaagagcTGTAAGTTATATATTTCTTAAGAATCTTGATATA
AATGCA
Run BLAST on NCBI

protein sequence of TCONS_00071376-protein

>TCONS_00071376-protein ID=TCONS_00071376-protein|Name=TCONS_00071376-protein|organism=Clytia hemisphaerica|type=polypeptide|length=592bp
MCCGRIWDRVKSICGRSMSSTQLVERTPLPKTIISILFAMLLFNAMAMTM
VFAYLPKLVKSFGTSEVNTGYYAGLIASSLFVGRLIFSLVWGYIVDLRGK
KFTAILSAFCLMVTTLAFGFSTNFWWAFITRSLQGLSMGLIVASKALLST
ICDDSNIALGMSIIISSFSAGLIIGPSLAGFLVFPHQQYPSVFPEDNIFS
KYGVLFPNFIIFIGLLVTVTIATKLIPSDKKNKNEEKNYLLDLRNENNNK
KKNYVTLKEDEDHQTFKRKSPDTYLEVSIKHHDEYKHKNPNMFYVQIVEP
IQSITPSRHNNTENLTWRQRWENSNVKELLSNKWCVLTCVLYGTYSLVAI
GFDEIVPLYLATSIEYHGMAFSTSQIGMALLIVSIFLIIIQVTLLTFLAT
KYGSRKMFIVSILILAFVLPFLPTISNIKNRTTLWVVLSIYLLICRVVIA
GPFLALNILINNSVEEHLLGTANGMAMSLSSAGRMIAPTMVGSLFSWSLT
NIKGVKDNINPLGFPLNQYFPFLILSFLAILNAIIASRIPVSLDKSMRKP
KDEKEDLDQPGNVTNITVGYFTPSHDNDEAIGYFTPSYEEKL
Run BLAST on NCBI

transcript from alignment at scaffold_60:933646..940943-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071376 ID=TCONS_00071376|Name=TCONS_00071376|organism=Clytia hemisphaerica|type=transcript|length=7298bp|location=Sequence derived from alignment at scaffold_60:933646..940943- (Clytia hemisphaerica)
AAAAAATTGGCACCCAAGTTATTTTGATTCCCCTACCCCTTAGCTTTCCA
AAAATGTATAACAAGTGCTTTGACTAGAAAAATCGAGCGATTTTACAAAT
TTCCCCCTACTATTATATTGATAGAGCTGAATGGTAGAATTAGAACATAC
TGTACCTATATAAGAAAACTTTAGAGAATCAAAAATGTGTTGTGGGAGAA
TATGGGATCGAGTGAAATCAATATGTGGGAGAAGTATGTCCTCTACACAA
TTGGTTGAACGAACACCTTTGCCCAAAACCATCATCTCCATTCTATTCGC
TATGTTGGTGAGCTATGTATTTTTATTGCGTTTTTTTGCGGTAAAGGCTA
CCGCACTTACGGTTAACAGCCCAAAAGTTTGCTGAATAATAACACACGGT
AGCCTAAAGGCAGGTATCCGTAATCCTCGTAGCTGTCCCTTCCGCATATC
TTTCAAAAGATTATCCCTAAATGCGAAAATGTGCCTTCCATATCAAGTAG
GAGACAGGAGAAAAGTTTTAATCCATAACACTTCTTTACAAACACATGAT
ACTCACCGATAGAATGATTTCACTAACAACACGCCATTCTTTTACAGCTC
TTTAACGCGATGGCAATGACGATGGTCTTTGCATACCTACCTAAACTCGT
CAAGGTGAGTCACACCTACTTATTTCCAATAATGTCGTTTAGATTAAGAT
TATGGAAGTATTTCGGTAAATTTAATCATCATCCAATGGAGTTCAATCTT
AATGTGTTTTTTTAACTTGATACATCCGATTGTCGCTAATTCAATCTTGA
ATTGATATCTAAATTGTTCGAATTACAGAGAAATTCTTTTATGAAGGATC
CGAGCGGCTCAGCCAACGATAACTGAGAATCGGCTCAAAGGAGTAGTGAG
AATTTACTATAAAAACTCATGGACCATAGAATGCCTTCTGGAGTTCGTTA
TTCCTTAACTTCATTTCATATTTCTACGTGTTTTTCTTTTTTCAGTCATT
TGGTACTTCAGAAGTAAATACAGGTATGAAAAGTTCATTTGTACTTCGTT
TTCTGTCTTTTGCATGCCTTTTGCATGGAATCTGTGCATTTCTTTATCAA
TTTATTCAACTATTCCCGGGAAATAAGCCATACATTTGACTACCAACACT
GATTTTAAACTTTTAAACGTTAGTGTTATCATAATAATTTAATAAGGGCG
CTTTAAGCGAGAAAGTATCATTTCTCCTGACCCTTGCAGCCTTTACAGTG
AACGTTCGAAAACCTAAAAATTTCCTCTTTGGACAGTGCCCACGTGACTT
ATCTCGAATGTCCCACGGACTTCTGGGTGTAAAAATTGGAGGCAGTCAGA
GAAAAAAAATTTATCTAAAAGCGGAGGATTCATCGTGGGAAAGGTTTAAA
AAACTAGATAGAATTCACAAGATAGTTACATCAATCACTGGACTTGAACA
CTAACTAACTTTTTCGTTCCTTTTATTTCACAGGTTACTATGCCGGCTTA
ATTGCTTCTTCATTATTCGTTGGAAGACTCATATTCAGTTTAGTATGGGG
TTACATTGTGGACCTTCGAGGGAAGAAATTCACCGCCATCTTGTCTGCAT
TCTGTTTAATGGTCACCACCCTGGCGTTCGGATTCAGTACAAATTTCTGG
TGGGCGTTCATCACTCGCTCTTTACAAGGACTTTCTATGGGTTTGATTGT
GGCATCGAAAGCCTTGTTGAGTACCATTTGCGATGATAGTAATATTGCAC
TGGGAATGTCTATCATTATTTCATCATTTTCTGCAGGCCTCATCATTGGC
CCTAGTCTAGCAGGTAAGAACCAATCAAATACCTACAATTTTAGTGACAT
ACCATGTAAATATCTAGCCTGGATTGTTAAAAGATAAGCAAAACTGAGCC
TCATTATTTTGTCGAAATGATGACATGCGTTTTATACCAAATTTCAAATA
TATATATTTTTCGTAAATAAAGCTAAATTTCGCGGAATTTATTTTTTTTC
ACTTACTAGGATTTTTGGTATTTCCACATCAACAATACCCATCCGTTTTC
CCAGAAGGTAAGATTCTTCTTCATAAAAAGCTTTCATAAATTTGAAAATT
CTTTTTGTTTCTGATATAAATTTGTTAGCATACATATATCCGGGGGGGGG
CACTCAAGGTAAATGACCTACCAGACGTTCGGTCCTTAAGGGTAGGTTTT
TCATAGTTCAGCTAGTGCACTGTAAGGGTAGGAAATTACAAAACTGCACT
GAACTGCACTGTAAGGGTAGAAAATTGTGAGGAAAGGCTAATTTTTTGGT
AAAATTGGCACAAAATTGGTCAATTTTGGAGGAAAAATTCCACATTTTCT
TGGAAAATTGCAAAAACTTTGAAAAAGTGCACTGCAAGGGTCTGATTTTA
GAAGCCAAATTTTGTGCCGAACGTATGGTCGTATTCAGATCGAGTGCCCC
CCCCCGGGACATGTATGAATTTCTGTCCAACTATCTTCTTTCAGGAGATT
TGGAAATTCCTTGGGGAATTCTGTGAATGACTCCTCTGGAGTCAATTTTG
TACTGCATTGAGTACAACTGTACTTATTAAAAATATCTATGGCTTCAGAG
GTTGATGTTTATGTATAGTCATTATTAGACTAGAGTCTACTTCTGGCTGA
ACTTTGCTTTTTGATAATTTCTTATGACGCTGAGTCCAGTGAAGTAGACT
AGGAGCGTTTGGCGAGGTCGCCATTTTGATAGAAAATGTTAAAAATCCAA
ATAACAATAAAACTACTTGTAGTTGAAAGATATAATCACAAATGAGAAAC
AAACATCAATAACAGATTTGCAATCCCTTATTCTCAAATAAAAACATTGC
TCCATACTGTTTTTACCTTCCAAAAACAACTAAAATCTGGCGGACTGTTT
TACAGTTTGCCTAAGCAAAAGAATATTACCATATACTACCGGGCCACTTA
ATCGCGCCATCCAGTCTATCAAAAAGCTTTAAGTGAACCCCGGGCTAAAA
GTCATTATAAAAAACCCGGTCTGGCAATGTATTGTTTTAAAGCTTTTTGT
TCAATTTTCTTTTGTTACAAACAAAAGACAAGTTACGATTTACATACTTT
TTGATCACGTTACCAAAACCTCCTCTTAGGATTGGTCTAATTTCTAATCA
CATGGTCAAAAAGTTTGCAAAATAAATCGATTTTGGTACGTAAGCTCTAT
CTTTTAACAATAAAAAGAGACAAAAGCCTATCCAGACCAGTGTTTTTATA
ATGACTATAGTTTATTTGGGCAAAAGCAATCTTATACCCTTTTGTATGAT
CCATTGAAATTTTTGACTATTTCATTTAATTTTTTTTTGCAGATAACATC
TTTTCGAAGTATGGAGTACTTTTCCCCAACTTCATCATTTTCATCGGATT
GTTGGTGACGGTGACCATTGCCACGAAGTTGATACCTTCTGATAAAAAGT
AAGTTCAAATCTCTGCCTCTCTTTATAGGGTACAATTAATTTTGATTTCC
CTTGTTTTTCTAGGGAAAACTTTGAAAGATTTTGGATTATTAAATATGGC
GTGCTGTCATGTTATATTTGTGATTACTTAAGTTGATTATGAGCCTCAAC
TCTCTATTGTAATTTACCTCCTTGAAATTTTATGAACCAAATTTTCATTA
TCTACTTCATTTAGAAACAAGAATGAAGAGAAGAACTACTTGCTCGATTT
GCGAAATGAAAATAACAACAAAAAGAAGAACTACGTCACTCTCAAAGAAG
ATGAAGATCACCAAACGTTCAAACGAAAAAGTCCTGACACATATCTGGAA
GTTTCTATCAAACATCATGATGAATATAAACATAAGAATCCTAATATGTT
TTATGTTCAAATTGTTGAACCTATTCAAAGTATAACACCTTCTCGGCACA
ACAACACGGAGAACTTAACCTGGAGACAACGATGGGAAAACTCAAATGTG
AAAGAGCTTTTAAGGTGAATACATATCAGCGCTCTTTTCAATTTTTTTCT
TCTTTTTATGAAAAGCTCGAGCTCACTACTCGTGTTTCAATGGGGTTTCA
ATATTCGAAGGAACTCTTTCCGTCTTTGGTAGATAAAAAGCATTCCTCGC
TAGAACATAATTTATTCACGACCCTTTTTAAAATGGTGGATTTAGCTCTT
GACTGGGAGAGTTAGCCATCCGTGTAACGTAACACAGTTAAAAACATACC
GTCACAAGCGTGTTTAGCTCCGTATTTGTCAACTGTATTTCCAACCTATT
TGTTTCTTATACAGCAACAAATGGTGTGTGTTGACTTGTGTATTATACGG
AACATATTCCCTGGTTGCCATTGGTTTCGATGAAATCGTTCCTCTATATC
TCGCAACGTCCATTGAATATCGTAAGTATGCCATGTTTTCTCTCAAAAAC
CTTGTGGTATTGTACACAAGCAACTCCAATTTTTGGGTCGCCCTGAGGTT
GTTTAGCATTCTAGCTCATTTCCAGAAAAGTTTGCCCCTAATATTATATA
CCATATTTATGCTTGGGTCAAGGGCTATTGTTTGCGTTAGATTATCTAAA
ATGCTTTTACTTTACGAGATAGTGAAAAAATATTTAGCTAATTTTGAGCC
CTCGAGCCTTAGCAACCTTGTTGCTCATAAAAATGTCTCTAAATTTCAAT
CGTAATTCTAGTAAACTCTTTCTCCACGTTTTAGACGGGATGGCATTTTC
AACCAGTCAAATCGGAATGGCATTATTAATCGTTTCAATATTTCTAATCA
TCATACAAGTCACTCTGCTCACTTTTGTAAGTTCTCTAACTTGTTATTCG
TTTTCAAATGTTGGATTATCTGTCTGTCCACTAGCTTGGAAACCAAANTT
TTGTAAGTTCTCTTACTTGTTGGTTATTCGTTTTCAAATGTTGGATTATC
TGTCTATCCACTAGCTTGGAAACCAAACAGAAGCGTTCTGCTTGCGTGAA
ATTAAGTATAGGAACAGTTTTTGAGAACAATTTTGTTCAAAACAAAATCG
TTAAGAAATGAGAACAACTTCAGAATAATGCTGTGCCTGGAAGAATAGAA
TAAGAACATTATGAGGGTCAAAGTGCCAAAAGAAATAAGAAATGCCGAGT
CTAAACAGAATTTACTTACAAGTTACTTTGCAGCCTCATTGTAATGATAT
ATTTTTCTTTTTTCAAATTTTCAGTTAGCTACAAAGTACGGATCTAGAAA
GGTAATGAACTTAAGTTACTTTCCTTCGCATACTTGAGCCTCGATCCTCG
CATATAACCTTATAAAATGTAGCCTGAATCAATATTGATCCATCCTTTCT
CATGGTTCAAATGCAATTCCATTCAGCATTTGATACTGTTTAGATTCATC
GTTGATATACTGTTCTTTTTCAGATGTTCATTGTCAGTATTTTAATATTG
GCTTTTGTTCTACCCTTCCTACCAACTATCAGCAACATCAAGAATAGGTT
TGTTTTGTTTTTATACCGCTCCCAATGCGCTGACTATAATCAAGTTTTAT
CGTTACAATATTCATATACACTGCACTGTGATACTCACGGTACCCTTAGG
TGCATTCTCATACACCCATGCCACAGACTTACTCTTAAGTTTTACATCTC
CATTGTCTAAACTCCATCATTTTCATCCGTATTAAAAGTGAAATAGAAAA
CACCACTCAATCCAGATTGCTCCCTACAAAACTTAAAAGTACCAAAAAAC
TGTCGATTAGGATTTTTTCATCATAATTGAAAGTATGGAAAACTCTTCAT
TGTTTATTCACTTCACCACAGGACAACATTATGGGTTGTGTTATCCATCT
ATCTTTTGATATGTCGTGTAGTGATAGCTGGACCCTTCCTCGCACTCAAC
ATCTTGATCAACAATTCAGTAGAGGAACATCTTCTTGGCACTGCTAACGG
AATGGCGATGAGCTTGTCTTCTGCTGGAAGGTATATAGCTTTGTTGATTA
CCCCGGCTCTCCAAGACTGAATTGAATTTATTCCATTGGGAATTTTTTTC
ATGAATTACAATTTTTAACCCCCTGGACACGGGTTATACCCCTGGACAAA
CACCAAATCAACCCCGTGGACACAAAAAATTACCCCTGGATATTGGAATT
TACCCCCTGGACATTGCAATTTTTTGGTATTTTTTCAATACCCCTGGACA
ATTCATCCTCCACCCCCCATTAACGGATTTTTTCTGGAGGAGCCCATTTC
CACTGTAAGCTATCGAGTACATAAACTGTTTTACGTTCTGGTGATTCTTG
CTTGAGATGATTAAAAGTCGGCAATGTAACGCTAACATGCAATTCAGTTT
ATAACCCAATCTGCTTTTTTTCCACAGAATGATAGCTCCAACCATGGTAG
GCAGTTTATTCTCATGGTCCCTCACCAACATTAAAGGAGTAAAAGACAAC
ATCAATCCACTTGGATTCCCATTAAACCAATATTTCCCATTTCTCATTCT
ATCATTTCTGGCTATCTTAAACGCTATAATAGCTTCAAGGATACCTGTAT
CGCTAGACAAAAGTATGAGAAAACCAAAGGATGAGAAAGAGGATCTGGAT
CAACCAGGGAATGTCACCAATATCACTGTTGGTTATTTTACACCGAGTCA
TGATAACGATGAGGCTATAGGTTATTTCACGCCAAGTTATGAAGAAAAAC
TCTAGGTTTTGTTTATATTTGTGCAATGTGGTGTAGACGATGACTTTTTT
TCAAATAGCTTATTATTTGGCTGGTGGTACATTGAAGGAAGAAATTTTGG
CGGATGGCCAAAAAAGTTTTTCAGAGGGAATTGAATTAGGTGGTTAACTT
GAAAAATTAAATTTGGCGGACGAAGAACATTTTTGTCCGAAAAAGGAAAA
ACCTGTTTTAAAGCCTGAAATAGCACACATTTGGGGGAATAAATAGAGCA
ATTTAAATTAGGCGGGAATTTAATTTGGCGGATGACGGAAAAAATTAAAT
TTTCTTCCTTTAGTGTAGCCTCTATCGGACTCGTGCTCCATAGTCAAGTA
CTTCTAGGTCTGATTCAGAATTTCATGGTTTTCGTTTTCTAGATATTGAA
ATTATGATTTCTTTGAATTAGATTGTGGAACTGAAATATCGCGTCTTTAT
GACTTTAGTTACAAAAAGAGTACGTAGTGCGAAATAGAAATCGAGTTATC
TTGCTCCTGGACAATTTTTGTGACTTTTTAAAATCAAAATTTAACTTTTT
GTATATAAGATAGAAGGTTTATTAGACGAATATATATATTTTTTTAAAGA
AAAAGAGCTGTAAGTTATATATTTCTTAAGAATCTTGATATAAATGCA

Coding sequence (CDS) from alignment at scaffold_60:933646..940943-

>TCONS_00071376 ID=TCONS_00071376|Name=TCONS_00071376|organism=Clytia hemisphaerica|type=CDS|length=1779bp|location=Sequence derived from alignment at scaffold_60:933646..940943- (Clytia hemisphaerica)
ATGTGTTGTGGGAGAATATGGGATCGAGTGAAATCAATATGTGGGAGAAG
TATGTCCTCTACACAATTGGTTGAACGAACACCTTTGCCCAAAACCATCA
TCTCCATTCTATTCGCTATGTTGCTCTTTAACGCGATGGCAATGACGATG
GTCTTTGCATACCTACCTAAACTCGTCAAGTCATTTGGTACTTCAGAAGT
AAATACAGGTTACTATGCCGGCTTAATTGCTTCTTCATTATTCGTTGGAA
GACTCATATTCAGTTTAGTATGGGGTTACATTGTGGACCTTCGAGGGAAG
AAATTCACCGCCATCTTGTCTGCATTCTGTTTAATGGTCACCACCCTGGC
GTTCGGATTCAGTACAAATTTCTGGTGGGCGTTCATCACTCGCTCTTTAC
AAGGACTTTCTATGGGTTTGATTGTGGCATCGAAAGCCTTGTTGAGTACC
ATTTGCGATGATAGTAATATTGCACTGGGAATGTCTATCATTATTTCATC
ATTTTCTGCAGGCCTCATCATTGGCCCTAGTCTAGCAGGATTTTTGGTAT
TTCCACATCAACAATACCCATCCGTTTTCCCAGAAGATAACATCTTTTCG
AAGTATGGAGTACTTTTCCCCAACTTCATCATTTTCATCGGATTGTTGGT
GACGGTGACCATTGCCACGAAGTTGATACCTTCTGATAAAAAAAACAAGA
ATGAAGAGAAGAACTACTTGCTCGATTTGCGAAATGAAAATAACAACAAA
AAGAAGAACTACGTCACTCTCAAAGAAGATGAAGATCACCAAACGTTCAA
ACGAAAAAGTCCTGACACATATCTGGAAGTTTCTATCAAACATCATGATG
AATATAAACATAAGAATCCTAATATGTTTTATGTTCAAATTGTTGAACCT
ATTCAAAGTATAACACCTTCTCGGCACAACAACACGGAGAACTTAACCTG
GAGACAACGATGGGAAAACTCAAATGTGAAAGAGCTTTTAAGCAACAAAT
GGTGTGTGTTGACTTGTGTATTATACGGAACATATTCCCTGGTTGCCATT
GGTTTCGATGAAATCGTTCCTCTATATCTCGCAACGTCCATTGAATATCA
CGGGATGGCATTTTCAACCAGTCAAATCGGAATGGCATTATTAATCGTTT
CAATATTTCTAATCATCATACAAGTCACTCTGCTCACTTTTTTAGCTACA
AAGTACGGATCTAGAAAGATGTTCATTGTCAGTATTTTAATATTGGCTTT
TGTTCTACCCTTCCTACCAACTATCAGCAACATCAAGAATAGGACAACAT
TATGGGTTGTGTTATCCATCTATCTTTTGATATGTCGTGTAGTGATAGCT
GGACCCTTCCTCGCACTCAACATCTTGATCAACAATTCAGTAGAGGAACA
TCTTCTTGGCACTGCTAACGGAATGGCGATGAGCTTGTCTTCTGCTGGAA
GAATGATAGCTCCAACCATGGTAGGCAGTTTATTCTCATGGTCCCTCACC
AACATTAAAGGAGTAAAAGACAACATCAATCCACTTGGATTCCCATTAAA
CCAATATTTCCCATTTCTCATTCTATCATTTCTGGCTATCTTAAACGCTA
TAATAGCTTCAAGGATACCTGTATCGCTAGACAAAAGTATGAGAAAACCA
AAGGATGAGAAAGAGGATCTGGATCAACCAGGGAATGTCACCAATATCAC
TGTTGGTTATTTTACACCGAGTCATGATAACGATGAGGCTATAGGTTATT
TCACGCCAAGTTATGAAGAAAAACTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044354XLOC_044354Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071376-exon-scaffold_60-1575043694:940637..940943TCONS_00071376-exon-scaffold_60-1575043694:940637..940943Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:940290..940346TCONS_00071376-exon-scaffold_60-1575043694:940290..940346Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:939921..939948TCONS_00071376-exon-scaffold_60-1575043694:939921..939948Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:939131..939460TCONS_00071376-exon-scaffold_60-1575043694:939131..939460Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:938887..938934TCONS_00071376-exon-scaffold_60-1575043694:938887..938934Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:937496..937601TCONS_00071376-exon-scaffold_60-1575043694:937496..937601Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:936980..937279TCONS_00071376-exon-scaffold_60-1575043694:936980..937279Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:936573..936679TCONS_00071376-exon-scaffold_60-1575043694:936573..936679Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:936168..936259TCONS_00071376-exon-scaffold_60-1575043694:936168..936259Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:935743..935769TCONS_00071376-exon-scaffold_60-1575043694:935743..935769Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:935497..935570TCONS_00071376-exon-scaffold_60-1575043694:935497..935570Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:935014..935172TCONS_00071376-exon-scaffold_60-1575043694:935014..935172Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1575043694:933646..934616TCONS_00071376-exon-scaffold_60-1575043694:933646..934616Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:940637..940943TCONS_00071376-exon-scaffold_60-1510915933:940637..940943Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:940290..940346TCONS_00071376-exon-scaffold_60-1510915933:940290..940346Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:939921..939948TCONS_00071376-exon-scaffold_60-1510915933:939921..939948Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:939131..939460TCONS_00071376-exon-scaffold_60-1510915933:939131..939460Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:938887..938934TCONS_00071376-exon-scaffold_60-1510915933:938887..938934Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:937496..937601TCONS_00071376-exon-scaffold_60-1510915933:937496..937601Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:936980..937279TCONS_00071376-exon-scaffold_60-1510915933:936980..937279Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:936573..936679TCONS_00071376-exon-scaffold_60-1510915933:936573..936679Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:936168..936259TCONS_00071376-exon-scaffold_60-1510915933:936168..936259Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:935743..935769TCONS_00071376-exon-scaffold_60-1510915933:935743..935769Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:935497..935570TCONS_00071376-exon-scaffold_60-1510915933:935497..935570Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:935014..935172TCONS_00071376-exon-scaffold_60-1510915933:935014..935172Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1510915933:933646..934616TCONS_00071376-exon-scaffold_60-1510915933:933646..934616Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:940637..940943TCONS_00071376-exon-scaffold_60-1491911889:940637..940943Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:940290..940346TCONS_00071376-exon-scaffold_60-1491911889:940290..940346Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:939921..939948TCONS_00071376-exon-scaffold_60-1491911889:939921..939948Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:939131..939460TCONS_00071376-exon-scaffold_60-1491911889:939131..939460Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:938887..938934TCONS_00071376-exon-scaffold_60-1491911889:938887..938934Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:937496..937601TCONS_00071376-exon-scaffold_60-1491911889:937496..937601Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:936980..937279TCONS_00071376-exon-scaffold_60-1491911889:936980..937279Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:936573..936679TCONS_00071376-exon-scaffold_60-1491911889:936573..936679Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:936168..936259TCONS_00071376-exon-scaffold_60-1491911889:936168..936259Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:935743..935769TCONS_00071376-exon-scaffold_60-1491911889:935743..935769Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:935497..935570TCONS_00071376-exon-scaffold_60-1491911889:935497..935570Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:935014..935172TCONS_00071376-exon-scaffold_60-1491911889:935014..935172Clytia hemisphaericaexon
TCONS_00071376-exon-scaffold_60-1491911889:933646..934616TCONS_00071376-exon-scaffold_60-1491911889:933646..934616Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071376-proteinTCONS_00071376-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:933646..940943 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.45705	1.5138	0.449452	0.285122	47.2737	35.627	26.2294	27.1793	12.0443	17.3296	10.8181	6.86163	4.56837	3.6953	3.59643	4.67697	5.98064	7.86187	1.89828	1.91836	5.34661	7.09642	9.2933	8.80287	10.0354	7.7881	3.52075	6.13647	5.60488	6.6834
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top