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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071422 ID=TCONS_00071422|Name=TCONS_00071422|organism=Clytia hemisphaerica|type=transcript|length=1297bp
gaaaagaaaagaaaagcaaatAATAAAAACATCATGGGGCAATCACAAAG
CACACAACAGGGAGGACGACCtagagaattttcaaagacagttGATGATC
TTGAATTTAATGTTCCAgacatttcaaagaaaataaagactGGGGATGAG
TTTGAAGACTCCAGTGTCACCACTACCGAAGAGCATCTTATAAAAGTACA
AGACGATGGAGGTTCTGGGTACATTGTGGCAGATGAAGAACGGCCCGTAC
AAAAGAAAACAGTTCCTGTTGTTTTTCATTGGGAACATGGTGGTGATGAA
GTCTTCTTATCTGGCTCCTTCAACGATTGGAAAACAAAAGTACCCATGAC
TAAAAGTGGTAATGAACACACTGCAATCATTGAGTTGCCAAGTGGAACAC
ACGAGTTCAAATACTATGTCGATGGTAATTGGTTGCATGACCCTGGACAG
ACGATCAATGATCATTTCGATGGACGAAACAATGTCATAACTGTTTCTGA
TAGTGATTTTGATTTCACCAAGGCTTTGATGACCGACGAAACTGATGAGA
AGAAACAACATACCGCAAGCTTCGATTCCTCGACTGGTGGTACTTCGCCA
TCCGGTTCTTACAGTAAACGTATTCCACACCATGGGGGAGTGCATATCTC
AACACACAACAGTGAAAGTTCCCACCCTCCATCGTTGCCACCGCATCTGC
TGAACGTCATTTTAAACAAAGAAACTGAACAGGAAGACCCAACCATGCTA
CCTGTTCCTCATCATGTCGCCTTGAATCATCTTTATGCGCTCTCCATCAA
GGACTCAGTGATGACGCTCAGTGGAACACATCGTTACAAAAGAAAATACG
TCACTACGGTCCTCTATAAACCGGTCGTTCTAAAGTAATATTCAAAATGG
TGGTCGTAGTACTTATTAATTCAGCAACTTGATTCTGACCGGACTTCCAA
TAGTCGCAGGGGAAATTGTTTGTTAGTATGATTGCTTGTAATATGCTCTC
TCATTCGTTACAATACGAcgaaaaaacatttcttgtgCTAGATAAACACT
ATTTTTTTAACGGAGCAATAAAGGAGTTGAAATTCATTTCCAAGGCAAGG
ATAGTATACTCATGTCCGGACGATGGCAATTCTGATTCTGATGCACACag
tattttttatctttgttctgttgtatttttcatttttcggaAGGTTAAAA
GGGTTGTAAATGATAGTCTTTCATTGCAGCCGTGTTTTGACTGCTTCTTT
TTTATAGTCTGAACTACCACATACACGTGCCATTCATAAGAATAAac Run BLAST on NCBI transcript from alignment at scaffold_60:1320693..1333403- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071422 ID=TCONS_00071422|Name=TCONS_00071422|organism=Clytia hemisphaerica|type=transcript|length=12711bp|location=Sequence derived from alignment at scaffold_60:1320693..1333403- (Clytia hemisphaerica)
GAAAAGAAAAGAAAAGCAAATAATAAAAACATCATGGGGCAATCACAAAG
CACACAACAGGGAGGACGACCTAGAGAATTTTCAAAGACAGTTGATGATC
TTGAATTTAATGTTCCAGACATTTCAAAGAAAATAAAGACTGGGGATGAG
TTTGAAGACTCCAGTGTCACCACTACCGAAGGTATATTTTTAGTTATTAA
TTATCAATCAATTATCCACACTTTAGGTCGATTTCGAGCGTCCGAAAGTC
ATAAGTTTTGAGAGTTTGAAGAGTTGGCAATTCGATGTATATTGGAGCCA
TTAGAGCTTCTTCAATAGTCTATACTTTAGCTACATTTTATTTCACTTTT
CTATATATATAGTCTAGAAGTATAAAACCTTCAACNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGGGGGGGGGGGTAGGGGCGTTTATTTGGAACCTAAGATTAATGA
TGGATTGTCATTGATCGATATTTTGTGAAGTGGGCATTTCTAATTTCTCC
CTTTCACTTTTTCCAGAGCATCTTATAAAAGTACAAGACGATGGAGGTTC
TGGGTACATTGTGGCAGATGAAGAACGGCCCGTACAAAAGAAAACAGTTC
CTGTTGTTTTTCATTGGGAACATGGTGGTGATGAAGTCTTCTTATCTGGC
TCCTTCAACGATTGGAAAACAAAAGTACCCATGACTAAAAGGTGATTTAA
GTTCTTTTGCCAAAGTGATATTCATGATATGCACCACTGGAGGGTCTTTT
GAGAATTTTTCCAGCCAATACGTTACTTTTTAATTTTTTAAGTGAAGTAT
TGGGTGGAAGATTTTCAAAGATTTCAGAAGACTTTCCAGTGGTGCATATC
ATGAATACGAAAATGTTTGTTTGACACTAAAGAAAGTATCTTCTTTTCTA
ATCTTATATGATGTTGATCAGACATTAGAAATGGGAGATGCAAAACGAAT
TCATTTCATTGCTTGTTTCATATAATGTCTTTTGTTTTCTCTACACAAGT
CGGGTCAGGTCTTGTCTGTACACAGACCCAGTATCTAGAGCTAATTTCAG
AATTCATTGCGGTAGAGGGTCTGTTGTCATTGTCTTTTCTTATTTGAGAT
TTTTCAACCCGACTGCTGCGACGGAGTATTGGTGAGTGAGGGTAGACGAT
GAAAGAAGTGTTGCTATTTATAAATCATACTCCATTGGAAGGTCTCCGTA
CGGGAATTATTTATCAAACAGACAATGCGCACATAGTGTCCTATGAAGTG
ATATACGTGAGATACACTCTGGTACAGAGTAGTTCAGGCCGGATGATACT
CAAGTTCGTCATGACCTACCTTATTGGAACTAATTTTAGCGGGAATTAAT
TTTAGCGTTTTTCGCGGTTTTTCGTCAAAATCGCGAAAATTTGAGCCCGC
GAAATACAATTTTTTGCAACTTTATCGAAAAATTTGAAAAATCCCTAGGA
AAATTAAAGAAAATTGCCCAAAAAATAGCAAAACCGCGAAACTTAAAACC
CGCGAAATGCAATTTTCGGATATTTTTTTTCGACCGCGAAAATTAGTTCC
CGCGAAAATTAGTTCCAATAAGGTAGGCAAATGACTCGATTACAGCGATA
CGGAATAGTCAGAAAAAGATCATTGATCATTGAAATCTCAATTTCGATAA
TATTAGAAAGCAAGACAAATTGTCTTTTCATCAGGCAATTTTCATGAAAC
AAAGAAAACTTTTACATTTATAACATTAGATCAAAACTGCGCCCCATACA
CGCTAAGGCTAAAACTAAACTCTTCAATATTTCATGAAGGAAAAGTGTTT
AAAAAAAAAGTGTTTCGTGTAGAAACGGAACAAAGATTTCCCCTGAAAAC
CTAGAAAACTTCGGTACAAAGACTTCTATTGCTTTAAGCAGTACAGCACG
GTTAATTATTTTTAAAGACGTCTCCATTTTAGGACCGCCTTTAAAACCCC
ACTGATTTTCCCACTGTATGGGTAGGGCGTCAACAGACATTTTTGGGGAA
AAGTCAAAAAATTCAAGATGTAGTGTTTTTTATGAAGATTTAACCTATTG
TGAGGCGTTCTGCGCAATTTTTAAGATCAGAAGTCCAAAATTGGACGAAC
CCCCCCCCCCTGGGGGTACTGATTCGCACTACAGGCCAAAATTGGGAAAA
AATAATGGCATTTTCTGGCCTTTTCAGGCCTGTAAATATGTCAAAACTAT
TGCAAATCTTTTTTTTTTCATTTGCTGTACTAAATTTTATGAAGAAACAA
CAAAATAATCATTTTGGGTTGAAAATTGTGCCCATTAGAGCCCTAAACGA
GCTGTTTTAAGCCAATTTTGGGTAGCAAAATGCTTTTAAAGGCCAATTTT
GCAAGTTTATAAACTTTAAACCGATTAATTCACATGTCTGAAATTTTCAG
AGATGGAAGTCTTCAATAAAATCTTTTAAGTAGAATGAATTTCAATTTTT
TTCAAAAATTCATAATGGCGTTTTTAAAAATCGCTTTTTAGCAACAAAAA
AATCATATTTATCAAAAAATAGCATTTTTTAAGGCAAGCTTTTACAAACT
GAGTTTAAAATGCTGACTGAAATTTTTTTGCAGTGATAGTATTCTGGAGA
TACTCAAGGGAAATCAAAATCATTTGGGTCTGGGATGCGTCTATGTCCAC
CATTATGGAAGTAAAATCCCTGCTAAGAGCCATTTTTCAGGCAAAAACCC
AAATTTGGACTGAAAAAATCTCTAAAATGACAATAGACATGGGCCCGAAT
TTTCTTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAA
ATAAAATCCCTGCTAAGAGCCATTTTTCAGGCAAAAACCCAAATTTGGAC
TGAAAAAATCTCTAAAATGACAATAGACATGGGCCCGAATTTTCTTGCAG
TAGTAGTATTCTGGAAATACTGCAGGAAAATTTAAGTCAACTGGGTTTGG
GATTTGGGTATATCCACCATTTTGCAATTGAAATTCCTGCTAAATCGCAA
TATTTCAAGCAAAAATCCCATTTTTGACTGGCAATAAACACGAGCCTAAA
ATCTTTTTGCAGTGATAGCCTTCTGGAAATACTAGAGGGAAATCAAAAAA
CTTTGGGTTTAGGATAAGGGTATATCCGCCATTATGGAAATATCTGCTAA
AACTGGCTAAAATGCAACGTTTCAAGCCAAAACCCCATGTTTGACTAAAA
ACTGCTCTAAAATGGCAAGAGACATGGACCCAAATTTCGTTGAAGAGATA
GTATTCTGTGAATTCTCTTGGGAAAACAAAATCATTTGAGTCTGGGATTT
ATTTAGATCCACCATTATGGAAATGAAATTTCTGTTAATCCGAGACCCAA
ATGATTTTGATTTCCCTGGAGTATCTCCAGAATACTATCACTGCAAAAAC
GATTTCAGTCAGCATTTAAACTCAGTTTGTAGAAGCTTGCCTTAAAAAAT
GCTATTTTTTGATAAATATGAATATTTTTGCTTAAAAGCGATTTTTGAAG
ACGCCATTATAAATTTTCACCCAGCCGGCTTCCGGAAACACTACATTTTT
TTATTTTCGCCTAATATGATGAAATACAATATCCGTCTTTTCGTCGTAAA
GAATTGCATAAAGGCAGTTCAAAATTGCATCCTTAAAAATAGGGTAACCG
CGCTGTATTGATTACCGATTTTCCCTTCTTTATTTTCAGTGGTAATGAAC
ACACTGCAATCATTGAGTTGCCAAGTGGAACACACGAGTTCAAATACTAT
GTCGATGGTAATTGGTTGCATGACCCTGGACAGGTGGCTATACTCATAGT
TTTTTCTTCATTCGTGTGCTCTAAACATTCACTAATTTTGTATGTTTTAT
ATATCCTAGTAATTTTTCAAATTATTAAAAAAATGCTTACCTCGAAAATA
AAAAGAATATAATTGATAGAAGAGTCCTAGTTAAATTTGTATTCATATTC
AATCAGGATGCTCGACAAAATCGAGACAAAATCGAGACAAAATCACTAGA
TATTGGTCCTATCGATTTGTCGCCGAAGTTGCGCCACACACAACGATTCT
CATGTGTCACAATAGCAAAATGAGTTGGGCACTCCTTGTGATGAGCTATT
AGTTATTGTTTTTTCTTCGTTTAGAAGACGATCAATGATCATTTCGATGG
ACGAAACAATGTCATAACTGTTTCTGATAGTGATTTTGATTTCACCAAGG
CTTTGATGACCGACGAAACTGATGAGAAGAAACAACATACCGCAAGCTTC
GATTCCTCGACTGGTGGTAAACAATCATTTTGATCTTTCCTTTTAATGAA
TAACGTTTTAAGTTTAAGTTTTTTAAGCATTTCCCTATTCTGCATGCAAG
CCTTTTTGAAATGCAGCAAAACCACATCATACTTATGTACGACCTCAGAC
TCAATTGCATTATGGTAATGTTCATTTTTTATACTTATTTCTTTTTGGAG
GATTGGCGTCTAAAATTCTAAAATTATTTCGTAGAGGTCGGTAGACCTGC
AAAATATAATTCTATGATTAAAAAAAATAAAAATGAAAGACGAGAGACTG
TTGCGATTTTTATCGTGTTTTCTATCAATACGCTTGATTTATTGGAAGCT
TAAAACCGATAACCCATAGATAAAGAAAGCGCCACAGAAAAAGTAATCCT
AGACAAAAATCTGATTTTCAGTTATCAAATATTACTTTCTTGACTACGTC
TTTATTTTCGAGATCATGTCGAGTTCATGCCGAGTGAATCCGTAAAGTCA
GTAGTACATTCACTGCATGACTGATATCGTCTTTATTTCGAAAGCGACTT
CTTTTACAATTGATTTTTAAATATAGAGAGAATACACGCTTTTTTATAAG
AACCCGTAAATTTATGTCAAGAGGCTCGGCTGTTCTTATTTTTTCATGAT
TATCAAGTGTAAATGTTCTTGAAATGTTTATAATGAGCTTACTTTATTCA
CTAGAATCGTCATTTTCTTAACCTTTTGTGAGCGCTGTTTTTTTAAAAAA
AAGTTGAAATTTTTCGAATTTTCTTTTTGAAACTCAAAACTTTAAAGTGC
CATAAAAGCTTGTAGCTTTTGATTTAGAGGATGGTTTTGGTACCATTGGA
AAGCTGTTTTCATACTCTTTCTAAAAGCATTCGGTTTATGCCCTTTAAAT
CAAGTGGTCAGAAGCTATAGCATAATATAGAACGCCACAGCTGCCAAAAG
TGTTCAACAACTGTACCGCGTGGTACATTTGCAAAGCGGTTGGGTCCTTA
AAGCAGCTCGTGTGGTGGTTTAAGCTTTTCGCGTGGTAGTTCAAGCTTTT
CGTGTGGTAGTTCAAGCATTTGGTGTGGCGGTTTAGGCTTTTTCCCCGAT
AGTTCAAGCTTTTCGTGTGGTAGTTCAAGCTTTTCGTGTGGTAGTTCAAG
CATTTGGTGTGGCGGTTTAAGCATTTGGTGTGGCGGTTTAGGCTTTTTCC
CCGATAGTTCAAGCTTTTCGTGCGGTAGTTCAAGCTTTTCGTGCGGTAGT
TCAAGCTTTTCGTGCGGTAGTTCAAGCTTTTCGTGCGGTAGTTCAAGCTT
TTCGTGTGGTAGTTCAATCGTTACGTGGTGGTTTAAGCTTTTCGTGCGGT
GGTTCAATCGTTCGGTGGGGTTCAAGCTTTTCGTGTGGTGGTTCCATCGT
TAGGTGATGGTTCAAATTGTTATGTGGTCGTCGTTTAGTAATTTATGCGG
ATAAATTATAATAAATTAAAAAAGGAAATAATTCGGTCCCGGTAATTTGT
CGATTAAAAAAGTTCTAAAATGGTAGCTGTGAAGCGACGAATTTTTTTGA
TTTACGATTTTGGGATAGTGACTCTTGCTTTCTTGTTGTCCTGGGTTTCA
TTTTGCGGGTATTTAATTTCGCGATTTTGTCTATTTTACACCTGACTTCT
TTCATTTTTCTAGGGGTTCTTGGCATAAAATAAAAGATTTCACGGGTATT
CAATTGTGCAATTTTTAAGCTTATTTTAGTGGCCCATATAAAAAATTGAT
AAAAATCCGTTCACAAAACCTTTGAGTCGGTAACTCGGTTAATTCGTTAA
AATAATTTCCTAATTATTTCCAAGGAAACAAAGTTCTTCCGTTTAAATTT
ATTTTACATTTACTTTTGGTTGAAAAGATAACAATCGAGTGTAATCAAGA
GCTTGTTCATGCGGGAAGAAATTCTAATGTGTATAAAATAATTAATAATT
TCGAGTTAGTTAGAGGGTCTATAGAGTATTAATAAAGAAAATTAATCTTT
TGCTAGTAACAAGGTTACTTTTTGGACCTACCGCGAGGTTCTATAAATTA
ACCCATGTCCGTCCGTCCGTTCGTCCGTCCGTCCGTCCGTCCGTCCGTCC
GTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGCTTTT
TTGCACAATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATT
TTTGAGAAAAAAATTATTTGGGCAAATTTGGGCCAAAAACTACCTAAAAA
TAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATT
TTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTAGT
TTTTCCCGGAAAATTCCTATTCGCCTTAAAAAACGGATTTTCGTATTTTG
GGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAATGTTG
ACTCGTTGTTTTTTTCTGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGCCA
AAATCTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATTCTGTCAT
TACTTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCAAAAA
CTCTAAAGAATGGCTGAAGTGGNCAAATTATTGTCACTTTTTTCTTATTT
TCATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTTTTTT
CTTTTCATTAATGAATAAACGGCTAAGAAAAAATCTACTGGCGTGAGACT
GAAAAAAAGGAAAAAGCTAGTTAGCAGTTACTAACTTATTGGAAATAATA
TTGGCGGGAATTTAATTATCTTCCACAATTGGACTATTTTATTTTTTATA
GTCCATACAGGGGTATTGACGAACTTTTCCAGGGGGTTTTCAACCCTTTT
TTCCAAGGGGTTTTTGGTAGTTTCAAAAGATTTCCAGGGGGCTTTATTAT
GAAGATTTATTTCCAGGGGTTCATAAAACTTCACAGATTTTTTGTTGACT
TTGAAAAGAAGAATGTTTCCAGGGGGCTAAAACTTGACATCCAAGGGGTA
AGCTTATGTTGAAAATTTCCAGGGGGTCTCCTTGTTAAAAAAGTTTGTCA
ATACCCCTGTATTTTTAGTGGTTTTGAAATGGAATAGCCATAATACTTCC
CTTCTTTAATCAATAAATATAGACTGAAACATAAAACAACAAAGCATGGT
CTGGAGTGAACCGCCTACTGCTTCGCTACCATTTTAGAACTTTTTTAATC
GACAAATTACCGGGACCGAATTATTTCTTTTTTTAAATTATTATAATTTA
TCCGCATAAATTACTAAACGACGACCACATAACAATTTGAACCACCGCCT
AACGATGGAACCACCACACGAAAAGCTTCCGGAGAAGTTCCAGATGTTAT
TTCCAGGTACTAAAAATGCAAATATATCTATTGACATGGGAAATTTTTCA
CTAATATCTTCTGAGAATGCTCTTCTTCTTGGTGTTACTATCGACAGTGC
TTTATCATTTTATACTCATATTCAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTCTCATTTGGATGTTTTGCAGTAAGATGGCAC
ATAATCTTTTGACTGAAGCTCACTACAGAGCTCTTAGAGCTAAAGAAAAT
CTTCTAAATCTTGATTATGACAAGCTTTTGGTTAAAGCAAATTGTGCGTC
TATCCATACTCATAACCTCCAANTACTATTAAGTAAATATTAGATTGTCA
TGTTGGTTTGAATTAGTCTTTTGTACTATTTTGTTTTGTACCAACGTTAA
ATAAAGAATAAATAAATAAAAAAATAAACCACCACACGAAAAGCTTGAAC
CACCACCGAACGATTGAACCACCGCACGAAAAGCTTAAACCACCACGTAA
CGATTGAACTACCGCACGAAAAGCTTGAACTACCGCACGAAAAGCTTGAA
CTACCGCACGAAAAGCTTGAACTACCGCGCAAAAAGTCTAAACCGCCACA
CCAAATGCTTAAACCGCCACACCAAATGCTTGAACTACCACACGAAAAGC
TTGAACTACCACACGAAAAGCTTAAACCGCCACACCAAATGCTTAAACCG
CCACACCAAATGCTTGAACTACCACACGAAAAGCTTGAACTACCACGCGA
AAAGCTTAAACCACCACACGAACTGCTTTAAGGACCGAACCGCTTTGCAA
ATGTACCACGCGGTACAGTTGTTGAACACTTTTGGCAGCTGTGGCGTTCC
ATAGCCTCAAGTTTGAGACTCAGTGTTTTGGCTTGTTTTGAACACATAAT
TATACGTGTCCCTCGTGGTCTAAAGGTTAATTCTGAGGCTGGGGTTGGGT
TGTTCTCGATTAATTCTTTGGTTTTTGCCAAAAAAATATTGCATCAAATT
CTTCTTAAAAAAGCGTGTATACTAAAACCAAAATTTAAATATACGACGAA
AATAAGAACAACTCTGCTTTCAGCCAAATTAACACATTTAACTGAAGATT
TTCTTGCAAAGTAAAAAGGAAAACTAGGAACACAGCCCTGTATACATTGT
CTGTTAANTGCAAAGTAACAAGGAAAACTAGGAACACAGCCCTGTATACA
TTGTCTCTTGGTATTTTAATTTCAGGTACTTCGCCATCCGGTTCTTACAG
TAAACGTATTCCACACCATGGGGGAGTGCATATCTCAACACACAACAGTG
AAAGTTCCCACCCTCCATCGTTGCCACCGCATCTGCTGAACGTCATTTTA
AACAAAGAAACTGAACAGGTACTCTAAAGAGATGTTTTTATGACCTGTAA
TAGCTTATTTCGTGAAAAAAGCTAATCGGAATTATTTTTACCGGGAAAAA
TTTAGTCACTTTGCCAAACATTCACCAACCGACCTTGTCTTAGTTGGGGG
AAGTTTAAATAACCCATCCTTCAAATTTTTCTTCAAACAAGGTATCAAAA
CAGTTTGCTAAACATCTATTCATTCAAGTTTCTCGAGCTGCATAAAGCAC
AGGAAAAAATCTTTAAATCCCAGGCCTGGAAAATGGCCATTTTCGGGGTG
GGATTTTTTTAGCCCTGAGATTGTTGGTCTTCTGACGCAGCGTTTTTCAC
TAATACACTAGATCTTCTTCCCATAGTTAGTCCACGCTAACTAACTACCT
CAATGAATGGACACTATCAATGTTATCGATTTAAGGTTTTTCCGCCTATT
GAATGAATCTATCAACAATTTTTCAGTAAATCAAAGCTTTGTCTGTATTA
ATTAAGGTTGTAGTTTTGAATTACCAGTCATTCATACACACATTTTTTTT
TTATAAGAACAACCAAAATTTTTTAAGCCTTCGAATGTTCTTATCTTTTT
GAGTTTTAAGCCTAAAAATGTTCTTTTGGCCATTTAGTGAATATTTTTTA
CCATTTTCCTAAGAAAAAGGTACAAACCCTTAAAAAATGTTCTCAACTTG
TTCTTAACATTTTGCCCAGTGAAACCTTATGTTCTTATATAGTTTGTTCT
TATAAAAAAAACCGTGTAACTATTCAATGCTTTAGTATGCCTCTTTTCGA
CGGCTTTTTAAATTGTTTTCCATTTTTACAGGAAGACCCAACCATGCTAC
CTGTTCCTCATCATGTCGCCTTGAATCATCTTTATGCGCTCTCCATCAAG
GTGAGTTTTCTATCCTTACTGCTACTGAGCAGTCAAGTGTAGTGGCTATT
GAACGGTATTGAAAATCCAAGAAACTACCTTAAGGGAAAACTAGTTTTGG
CGGGTTTAATTTTTCTGAGCGATAAATAATTTTGGTCAAATTTGTCAAAT
TCGCCAAAAGTAGTTCCCACAAGAATAAGTTCCCTTTAAGTTAATGCAAT
CTAAAAGGGGTATTGAAATTTCCCTATTTTATGGTCAAATTAGTTAATAC
TCCAAAATTGGCCAGAAAATTCCAAAAAGAGTTCTAGGTTGTTTTACGAA
ATCTGCAGATTATTCATAAACTGGACTCTTGCTAATTGAGACTTCTATTA
TTTTTTCACATTCGCTGTTCTGAAGCCAACTGAGTAGTACTCAAAGTTAC
ATTTACATGACTACTAGAATCAAAAAGCTCTCCTTTCCAATTTGAGTTCG
TCAAACCTAAGTTTCACTGACCCAGTTCAACTTAAAATTCTCGATAACGG
TTTATTTACTTTTAGGACTCAGTGATGACGCTCAGTGGAACACATCGTTA
CAAAAGAAAATACGTCACTACGGTCCTCTATAAACCGGTCGTTCTAAAGT
AATATTCAAAATGGTGGTCGTAGTACTTATTAATTCAGCAACTTGATTCT
GACCGGACTTCCAATAGTCGCAGGGGAAATTGTTTGTTAGTATGATTGCT
TGTAATATGCTCTCTCATTCGTTACAATACGACGAAAAAACATTTCTTGT
GCTAGATAAACACTATTTTTTTAACGGAGCAATAAAGGAGTTGAAATTCA
TTTCCAAGGCAAGGATAGTATACTCATGTCCGGACGATGGCAATTCTGAT
TCTGATGCACACAGTATTTTTTATCTTTGTTCTGTTGTATTTTTCATTTT
TCGGAAGGTTAAAAGGGTTGTAAATGATAGTCTTTCATTGCAGCCGTGTT
TTGACTGCTTCTTTTTTATAGTCTGAACTACCACATACACGTGCCATTCA
TAAGAATAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071422-exon-scaffold_60-1575043694:1333223..1333403 | TCONS_00071422-exon-scaffold_60-1575043694:1333223..1333403 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1575043694:1331663..1331837 | TCONS_00071422-exon-scaffold_60-1575043694:1331663..1331837 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1575043694:1328221..1328314 | TCONS_00071422-exon-scaffold_60-1575043694:1328221..1328314 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1575043694:1327738..1327876 | TCONS_00071422-exon-scaffold_60-1575043694:1327738..1327876 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1575043694:1322586..1322728 | TCONS_00071422-exon-scaffold_60-1575043694:1322586..1322728 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1575043694:1321704..1321772 | TCONS_00071422-exon-scaffold_60-1575043694:1321704..1321772 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1575043694:1320693..1321188 | TCONS_00071422-exon-scaffold_60-1575043694:1320693..1321188 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1510915933:1333223..1333403 | TCONS_00071422-exon-scaffold_60-1510915933:1333223..1333403 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1510915933:1331663..1331837 | TCONS_00071422-exon-scaffold_60-1510915933:1331663..1331837 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1510915933:1328221..1328314 | TCONS_00071422-exon-scaffold_60-1510915933:1328221..1328314 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1510915933:1327738..1327876 | TCONS_00071422-exon-scaffold_60-1510915933:1327738..1327876 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1510915933:1322586..1322728 | TCONS_00071422-exon-scaffold_60-1510915933:1322586..1322728 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1510915933:1321704..1321772 | TCONS_00071422-exon-scaffold_60-1510915933:1321704..1321772 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1510915933:1320693..1321188 | TCONS_00071422-exon-scaffold_60-1510915933:1320693..1321188 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1491911889:1333223..1333403 | TCONS_00071422-exon-scaffold_60-1491911889:1333223..1333403 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1491911889:1331663..1331837 | TCONS_00071422-exon-scaffold_60-1491911889:1331663..1331837 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1491911889:1328221..1328314 | TCONS_00071422-exon-scaffold_60-1491911889:1328221..1328314 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1491911889:1327738..1327876 | TCONS_00071422-exon-scaffold_60-1491911889:1327738..1327876 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1491911889:1322586..1322728 | TCONS_00071422-exon-scaffold_60-1491911889:1322586..1322728 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1491911889:1321704..1321772 | TCONS_00071422-exon-scaffold_60-1491911889:1321704..1321772 | Clytia hemisphaerica | exon |
| TCONS_00071422-exon-scaffold_60-1491911889:1320693..1321188 | TCONS_00071422-exon-scaffold_60-1491911889:1320693..1321188 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:1320693..1333403 - |
Blast
BLAST of TCONS_00071422 vs. Swiss-Prot (Human)
Match: AAKB2 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 7.609e-50 Identity = 98/221 (44.34%), Postives = 126/221 (57.01%), Query Frame = 1
Query: 226 VADEERPVQKKTVPVVFHWEHGGDEVFLSGSFNDWKTKVPMTKSGNEHTAIIELPSGTHEFKYYVDGNWLHDPGQ-TINDHFDGRNNVITVSDSDFDFTKALMTDETDEKKQHTASFDXXXXXXXXXXXXXKRIPHHGGVHISTHNSEXXXXXXXXXX--XXNVILNKETE-QEDPTMLPVPHHVALNHLYALSIKDSVMTLSGTHRYKRKYVTTVLYKPV 876
+ D +P Q+ P V W GG EVF+SGSFN+W TK+P+ KS N+ AI++LP G H++K++VDG W+HDP + + NN+I V SDF+ AL D + + SS P G + SE LL VILNK+T DP +LP P+HV LNHLYALSIKDSVM LS THRYK+KYVTT+LYKP+
Sbjct: 66 LEDSVKPTQQAR-PTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSP-------------PGPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI 272
The following BLAST results are available for this feature:
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