TCONS_00071468 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071468
Unique NameTCONS_00071468
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1763

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071468 ID=TCONS_00071468|Name=TCONS_00071468|organism=Clytia hemisphaerica|type=transcript|length=1763bp
TGCTTCAGCTCTTGATAAAGTCGAAGATGAATTGGCGGGAGTCATGAAAG
AGATCGATGATGCGCCGAATCTCTCAGATGAAAATAAAGCGCCGTTACTT
GAAAAACTGACTACATTAGTTCAATTGCATGCTGACATCAAGGAGAAATG
GGACACTTGTAAACACAGcttttttgtCAAATTGGATCACCAACACGCGA
AGGAATTGCTTCTGATGACGAAATGGAAACAAAAGTCAAAATCCACGGAC
GAAACGTTGACATCTCTTGAAGGGAAATTGAACGTGTTACTCTCTGAACC
AATTACTGAGAGTAATGCAAGTAAAGTTTTGCAAGAAATGGAGACATTTG
AATCTGAATTGAAAGGAACAGACCCTACAATCAATGGCAACTTGGATTTC
GGTCGAACTTTACTACGAAGTGGGAAAATAGTCGATTCTTCAACGAAAGA
GAGCATGCAGAGTGAGATTGATGAGTATTTCGAACGACGAGCAAAAATGG
ATGATACGTTAGATGATGAACGAAGGAAgTTGGAAAAGATTATTGAAGCA
AAACGAAATTCTGAAAGCAAAGAACTACAAAAATGGCTTGAAAAAGTCAA
TCAAGTCcgaaaaacattacgtcattatgAAATGTCCGGACAATCAAGAA
TCAACCGTCCGAATTCTGATTTACAAGTCTCCATTGCTGAACAGAAGCAA
TTGATTGGTGAAGCCAGCGAGTATCAAGTGGAAGTGAGCAATGTCGTTGA
AAGCGGTCAACTTCTCATGCAGTCTTTCACCGATGCTGATCAAAATGAAG
AATTGAAAAGTGAAATTGATTCTGTTCACACTCTTTCAACTGCTACCATC
GAATCACTACAAGAAATTCTCAAAAGATTACAGAAGAGCTATGATGATCA
AATAGCCAAGGAACTTCTCCTTTTATCCAAATGGAACGAGAAGGCGAATG
TGTTGAATACTTGGCTAGATGACATGGAACATTATTTGAACAATCTTCAT
CTGGCGAACGAAAAACCCAAAGAATTATCCTCATCAAGAGCAGAATTCGA
GTCTTATCAGACCCGATTACAGTCGGAAAGCCGAGGAATGCAGTCCAATA
TTGATTTCGGTAGTTCGTTAATACGAAGTGGCAAAATATCTGACGAGAAC
AACAAAAGCCAACTACAAGTAGAGATTGATGATTTCTCTTTGAGGAAAGA
TCAACTGAATCAACAATTCCAGAATGGAAACGCTAGACTAGTAGCAGCGG
AGGAACAATACTCTATGAACCAATCAAAACTCTTGAATTTGTGGTTCACC
AAAGCCAATGAAATCAAGAAACAGTTGAGAGCTATTGAACTGAAAGGTCA
ACTTGCTAATGGACAAACAAAAGATGAATTGATTACCACTCTACAAAATC
TTGAGGCTTCACTTGCAAGTTTAAAGGGCCTGGAATCGACAGTGACAGGG
CACGTGGACGAAGGTAACGCCCTGGTTACGACTACAACTAACAAAGTGAA
AGCAGAGGAATTGAAAGAGGAGATCGAAGCACTTCTTTCTTTCTATCGAG
CAGTCACAGAACAAATGGAATCAAACCATGAAAGGTTCCAAAAACGTTTG
GTCGAAGTCCAAGGTGAAGAAGAACAATTGCTAGCTCAATGGGAAgataa
gaagaaagaagttgatGAAGAATTATGTTTTATCGAAGAACAAGTCAGCC
AATTCGCTGAATTACCGGAAGACGATCTATTATTGGAACAAGCTATCGAT
GATAATGaggttt
Run BLAST on NCBI

protein sequence of TCONS_00071468-protein

>TCONS_00071468-protein ID=TCONS_00071468-protein|Name=TCONS_00071468-protein|organism=Clytia hemisphaerica|type=polypeptide|length=587bp
ASALDKVEDELAGVMKEIDDAPNLSDENKAPLLEKLTTLVQLHADIKEKW
DTCKHSFFVKLDHQHAKELLLMTKWKQKSKSTDETLTSLEGKLNVLLSEP
ITESNASKVLQEMETFESELKGTDPTINGNLDFGRTLLRSGKIVDSSTKE
SMQSEIDEYFERRAKMDDTLDDERRKLEKIIEAKRNSESKELQKWLEKVN
QVRKTLRHYEMSGQSRINRPNSDLQVSIAEQKQLIGEASEYQVEVSNVVE
SGQLLMQSFTDADQNEELKSEIDSVHTLSTATIESLQEILKRLQKSYDDQ
IAKELLLLSKWNEKANVLNTWLDDMEHYLNNLHLANEKPKELSSSRAEFE
SYQTRLQSESRGMQSNIDFGSSLIRSGKISDENNKSQLQVEIDDFSLRKD
QLNQQFQNGNARLVAAEEQYSMNQSKLLNLWFTKANEIKKQLRAIELKGQ
LANGQTKDELITTLQNLEASLASLKGLESTVTGHVDEGNALVTTTTNKVK
AEELKEEIEALLSFYRAVTEQMESNHERFQKRLVEVQGEEEQLLAQWEDK
KKEVDEELCFIEEQVSQFAELPEDDLLLEQAIDDNEV
Run BLAST on NCBI

transcript from alignment at scaffold_60:1535840..1545525-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071468 ID=TCONS_00071468|Name=TCONS_00071468|organism=Clytia hemisphaerica|type=transcript|length=9686bp|location=Sequence derived from alignment at scaffold_60:1535840..1545525- (Clytia hemisphaerica)
TGCTTCAGCTCTTGATAAAGTCGAAGATGAATTGGCGGGAGTCATGAAAG
AGATCGATGATGCGCCGAATCTCTCAGATGAAAATAAAGCGCCGTTACTT
GAAAAACTGACTACATTAGTTCAATTGCATGCTGACATCAAGGAGAAATG
GGACACTTGTAAACACAGGTATATATCTAGCTTGTCCTCTTATGACAGCT
TGATATTTTTTGCGAAGCGAATTTATGAGCGAAGCAGTTTTGCTATATTG
TGCACGTACCTTTAACTTCTATCCCAAGCGAAAATTTGCTATAAAATTTG
CTATATAAATCACATCTACAAACCGATGATTTTATCAAAATGACCTTGAA
TGGTTTGGCTTGAAGCCACGAAAACCTTCTTGGTTTGGTAGCTAGAACTG
CGAAAAAGGCAGATGAGATGGAGTTTTTATAAGATACTATAATAATTGGT
CATTTGATGTAATAAAAATGCACGTTCTTTAGAAAAAGTAAGAAAATTGT
TTTATTACTGGTTAACAACCAACCAAATCAAATAAGAGCTTGTAAAAACT
CCATCTCGTCCCGAAAAAGGCCGTTTTAAAATGGTGTACCCTAGCAGTGA
ACAGCAACAAAATTACCAAGTTACCGCGCGTGCGACACGCATCTAAGCAA
TCTAAGCAGTGGTTCTTCGGTTTTAAATGTTTATTTTGCTGTTAAATGGA
AAAAAATTAGTTTGAACGTTGACAGAAAGGATCTTCATCATCCCTTGACT
TTTAACAGCAAGTATCAAGTATCTAATAAGGTCAATTAATGAGAGATTTT
TGCAAGTCGGGCGCGAGGAGTGCTCTTCTAGTGAACGAAACTTACCTTGC
AAAACCAAGTGGATATTCTATGATAAAGAAGTACGGAGGCAAGCGGAGGT
AATCGAATTTGTCGAATTTGTCAAGAAATAAATCAAAACTACCCAAGAAC
CAACAAGCCATCTTTGTACATTTTTGTTTTTGTTTTATTTTTATCTTTTG
GACGATTCGTGATTCGAATAAAAATGTTCGATCGTTCAACGAATATCGTT
CGATTTTATTAAGGCACCATTTACACTAGAATAACTAGTAGGAAAAAAAG
AGCGATGCGCGGCGGATGGCGGCGGGTGTTGTGCTGCCGTAGATTATGTG
GTGTGTTTGGGGCATTAAGGCTCTTACGACCCTGGCTCTATAGAATAGCG
GCTTTATTAGAGTGATTTTTAGAGTGTCTCTTATTTTGCTAGCAACTTGC
GAGTTAAGGTGGAGTCTGGATCGCTTCGCAACCCTTATACAATACGGCTA
GTTCAAGGCTTTCTTTTACCCCATCTAAAATCGAAATCAAAAAAAATTTG
AAAGTGCAATCCTTGTCTGACTGAAGTCGGCTATTCATCGGTTGCTTGCT
TGCTTTATCTATCCAGAAGTAATTTTGACACTGTTAAAATACTACAATGT
TTTTTATATTTGACTTTGTTTTCAGCTTTTTGATCAAACTTAATCAACAC
ATGGGGAAAGAAACAGCCCTTTCTAAACTATCCACACAACTAGGAGAATG
CGAAAAACAGTTGAACGTTTTAAACAGCAAAGAAGTTCCCGAATTATACC
TTTTCCCAGAAAGCAGGGCTGTCATGGAGGCACAACACAAGGTAGGCGGT
AATACAATTTTTGTTAGGTTGCACTTTGATGCAATTCGAGCAATCACATA
CTTTTGTCAAACTCAATAAGGAGACTGAGCAAAACAATGATCATGTCAAG
TTATTCGAACCCGTTGTTGTTGTTTTAGTGGTATAAGTACTAGTCTTTCC
TATTCAAAGAAATATCACGCGAATTTTACTTTGCATTCTCAGGAAATGCA
AGACTCACTTGACCAAGTTGAATATGAACTAGCAGGAGTCATACAAGAGC
TTGATGACGTGCCAAATCTTTCTGGTGAAGATAAAGCGCCATTACTTGAA
AAACTTACCACATTAGCTCAATTACACGCTGACATCAAGGAGAAATGGGA
TACTTGTAAAGATAGGTATGGATTTATATAGTTTCATGATATTTGATATT
TGATCTGGCGAATCTTCTAACGAAATAAACTTTGACAAACTGCATTTTCT
AATCTTTTCAGCTTTCTGATCAAATTGGACCAGCACGCGGGTAAAGAAAT
GGCTCTTTCGAATCTATCTACACATTTGGAAAAATGTGAAAAACAGTTAC
AATTACTGAACAATAAAGAAGTACCAGAACTTTATCTTCTACAAGAAAAT
AGAGCTGTTATGGAGGCACAACACAAGGTAACAGGGAAGATGACATCTAA
ATACAGCATGCTATAAAAATGAAGTTTGCTTTAAAATCTCACCCCATCAT
GTCATAAAGACATGAAAACTAGGTGATCTATCCTTTGAGCCTGGTTTAGA
TTTGTTAGAACACGTAGATTCGTATCATCTTCTATGAAGATAGGTTTCGA
CTTCAAACTAGATATTTTCACTTTTTTTCATATCTGACTTTTCCTCTTGA
GATGATGATGAAGACCTTTCTCATTAAAACAGCCAGAACCTTATTCGTTT
TCATAACACTGAAAGATAAAAGCAAATTATCATCTTTTGCTCTGGATATT
CTTGACCTGATTAATTTTCTCGGACTTTCTTTATTGGCCGAAATCGTCAG
TCGGTTTCAGGTTGGTTACGCTTGCAATTAGGAAATATCACACCTATAGA
CACTGTATTTTTACCATTTGTTAATTTTAGGAAATGCAAGACTCACTAGA
CGTAATCGAAGAAGACTTATCTAAAGTTATGCAAGCTCTCGATGACCCAA
ATCTAACAGATGAAGATAAAGCACCATTACTTGAAAAACTAACCGTTTTA
GTTCAATTGCATGCTGATATCAAAGAAAAATGGGATACTTGTAAAGCTAG
GTTTGTGCCTTTTAGGAATGGCTCCAAGAGGGCTTCATTCTTTCGTCAGG
ACCAATTTTTTTTGGTCCTTCAACTTCTTATACCAGCTTACTTCTTTTAT
TGTGAACATTTTTACCTTTCTACCATTTTCCGGTATATAACCAACCCTTG
TTAACCAATTGGTACTTAAAGTTATACAGACATCCAATAACATGACAGCT
TTGCAATCAAATTACATTGACAGCGATAGTCTAAAACTAAAATCAAAGTA
TAAAGTGTAGCTCTCTCTTCTATGGGAATCTTGAAGTGATAAGCAACTAA
CTCTATTCTCAAGAGACATCTTGAATTTCAAAAGATCATAGGTACTCCCT
TTTTAATATTCACCTTTTTCAGCTTTTTTGTCAAATTGGATCACCAACAC
GCGAAGGAATTGCTTCTGATGACGAAATGGAAACAAAAGTCAAAATCCAC
GGACGAAACGTTGACATCTCTTGAAGGGAAATTGAACGTGTTACTCTCTG
AACCAATTACTGAGAGTAATGCAAGTAAAGTTTTGCAAGAAATGGAGGTG
ATTCTAAGTGTTTTCTTGTTTTCAAGTTTTGACGCTTGATTGAATTTGCT
TAGCATTGATAATTTTGTTTCAGAAATTTTGCGTTGTTGCTCAGTCTTGT
ATTTCTCTCTCGTGCTTAAAAACCATAACTTTGTGCACAATAATTTGTTT
CGTATAAAAAGTAATGGTTTTGTTTTGGTGCTCAAACTTTACACAATGGG
CAGTCCTTTAATTCGACTTTGAAGTATGATGGCCAACTGTATCATTATAG
TATTACTGCTTACTAAGGTGCACTCTTCTTCACATCACAGACATTTGAAT
CTGAATTGAAAGGAACAGACCCTACAATCAATGGCAACTTGGATTTCGGT
CGAACTTTACTACGAAGTGGGAAAATAGTCGATTCTTCAACGAAAGAGAG
CATGCAGAGTGAGATTGATGAGTATTTCGAACGACGAGCAAAAATGGATG
ATACGTTAGATGATGAACGAAGGAAGTAAGTCGATCAATTGCCTTTGGAG
CTCTTCGCACGTGACGAAAGGAAGCCCTTTTATTGGTTACATTCAAGTTT
TACGTCAATTCTAACTGATAGAATGGCTTCATTTCTTTTCGGAGCGGAAC
GGAACCGTCACGTGTGAACATAGCCTGAAACTCTTTCTCGTACATATTCT
TTGGTATGTTTACTTATAGCCCCTAGGGAATTATCCTTTAGGTCAACAAT
GGAACTCTGTATGTTTATTCTCCAAGACTAGAAATAACTCCATAACTCGA
ACCCGCACGGGGAACACAAATTTGTTCCGAGTTAAAGAAATTTCAAGTCA
TGAAGGTTAAAGAGACTCAACTGTGATAAGATGTGATTGAAAAACTCTTC
CAGAAAAAGTTGCAAAGAACAAAATGAAAGTTCTTTGCATATTCCGGACA
GCTTTGAATTTACACATACAGATAATGGTATATAAAGAGCAGAGCATTCC
TTATTAAACTTTAATTTTTTAAGGTTGGAAAAGATTATTGAAGCAAAACG
AAATTCTGAAAGCAAAGAACTACAAAAATGGCTTGAAAAAGTCAATCAAG
TCCGAAAAACATTACGTCATTATGAAATGTCCGGACAATCAAGAATCAAC
CGTCCGAATTCTGATTTACAAGTCTCCATTGCTGAACAGAAGGTAAAGCA
TATTTTCAAATCAAGCATAGTCAAGAAATACCCTGTGTGAGGAGTTTGTT
GATTTCGAAGGGGGGGGGGGCAGAAAACTTGTTCCAGTATATGATAATTC
GAGATTCGAGTTATCTGTAATTTTAGCTATACAAAGCTGAGTCGTCTAGT
TTTGACCTGGATTTAATTAAATAACATAGGTTAAATAAATCTATATAAGG
TTTAAAATTCGTCAGTAGAAAGTGACGAAAATCTTTTTGCAAGCGGTGAC
ATTTTCTTTCCGACGAACTTTTGACGATAAGTTAGTCAAAACTTAATATT
ATAAAACATCTTCTTCTTTACAGCAATTGATTGGTGAAGCCAGCGAGTAT
CAAGTGGAAGTGAGCAATGTCGTTGAAAGCGGTCAACTTCTCATGCAGTC
TTTCACCGATGCTGATCAAAATGAAGAATTGAAAAGTGAAATTGATTCTG
TTCACACTCTTTCAACTGCTACCATCGAATCACTACAAGAAATTCTCAAA
AGGTAGATAATAATGATCATAGTTTGCATCCCCCTTTTTAAGAGGAGGAG
CCAATTTTTTTTGAGGGGCCCCCTTTGAAAGAGGGGGTACCAAGATTTGA
TTAAAAAACTGAGGGGAATGTGATGTGAATGTATGGGGGGGGGGGCAAAT
AAGAAAGTGGGGTTTGATATATAAATGGCCACAGTCTGTTTTAAAGTAAA
AATATGTACTACCAAAACTCTATATTGTATTTTGGGAAATCTTTGACTCA
TGACTGTATAGATTTTATACTCTTTGATCACTTTGATGTTGCATAGGGCG
AGTTTCCTTTGAAACGAATTTTCTATATAAAACAACGGAAATAACTTTAC
ATCGCATGCAGTAAACTGGTTTAACTACTTGAACTTGATAGCAATAATTT
AGTTGTATCACTAAAACATACTCTCTAGGATGATCGAAACCGTTTTGAAT
TTTGTTGAACTTCCTTCGGTTCATTATAGATTACAGAAGAGCTATGATGA
TCAAATAGCCAAGGAACTTCTCCTTTTATCCAAATGGAACGAGAAGGCGA
ATGTGTTGAATACTTGGCTAGATGACATGGAACATTATTTGAACAATCTT
CATCTGGCGAACGAAAAACCCAAAGAATTATCCTCATCAAGAGCAGAATT
CGAGGTCAGTGCTTTGTCTTTTTTCCCCTCCCCCATTAATTTCAAAACCC
CGAAAAGGGGTTGGATTTGAAACTGTTGGATAGGAAATGAAGCCACTTGT
TTCCCATCCAAGACACGCAATATGCGTGGTTCTCACATAAACGCCGGACT
GGGCTCCTCCAGAAAAAAATTGTACATGGGGGGGGGGGGAGGATATTTTG
TCCGGGGGGTAGTAAAAAAGCATCAAAATTTGCCTTGTCCGGGGGGTAAA
TTTGCTCTGTCCGGGGGCAATTTGGGGTGTCCGGGGGTCCAGCAGATGCT
TGTCCGGGGGGTAAATTTGCTCTGTCCGGGGGCAATTTGGGGTGTCCGGG
GGTCCAGCAGATGCTTGTCCGGGGGGTAAAACCTATTGTCCGGGGGGCCA
CAAGTCACCCTGTTCGGGGGGTAAATCACTAAAAATTGTTATATCCTCCA
CCCCCCATGTACATTTTTTTTCTGGAAGAGCCCATTAAAAGTAAAATTCA
TTGCCAGATTTTCAAAGCTATCTTGCATGAAATCAAAAAAAAGGGCTAGA
TTCAATCCGTCATTTTAAATGCGGTGCAAATCTTAAGCCTAAACTATTTC
TTGCTTGAGAAAGGTTAATGATCCCTTTCTACTCTGTGGGGCTTTAAAGT
TAATGTCCACTAGCCTGTACCGACGACCACGTCTTTTTCCTCGACAATTC
TTTTTTCGTGTAATTCGCTTTTCCTCTTCTTACAATTTCTTTCCTCTTGG
TTACACACAATTTATGGACATCTTTCATAATTCGGCTTTAACTCTAATTT
TTTCAATTAAACCCAAGAAGTATAATCTCAACTCACAAAGAATCTTTTTG
TCTGCCTATTGAGCTTCAAGTTATCGTGCTTCTTTTTATCATTTTATGAT
ACAGGGATTTTATCATCTCTTCGATAATTTGATATCCATTTTAAAAACAG
TTTTGCTAAAACTCTTTATTCCAGAAATTTATATATCATAGAAATATCTT
GCTTGAGTTAAAATGTAATTTCAAAAAAGTTTTATTGTATAAGTTTGAAA
GTTTCTAAAGTATCATGCTGTGAAGATCTGAAGAAAGACATCACTAGTTA
CTAGGCTCTAACAATATAATTTATTTGACATGGTAGTATATTATATTTTC
ACCCTATGGGATAAATTTTCAGACACCCTATTCTTTTGTGCCAAATTTTC
ATATTTTTTCAAATGTGCTATATATAATATCAGCCTTTTTTTAAGAAAGC
ATTCTCACCTTTACCCTTTAATCTTTCTTCATATAGTCTTATCAGACCCG
ATTACAGTCGGAAAGCCGAGGAATGCAGTCCAATATTGATTTCGGTAGTT
CGTTAATACGAAGTGGCAAAATATCTGACGAGAACAACAAAAGCCAACTA
CAAGTAGAGATTGATGATTTCTCTTTGAGGAAAGATCAACTGAATCAACA
ATTCCAGAATGGAAACGCTAGGTAACCTTTTTAATAATATGTCACTCAGA
ATTTCTTCAAAGATGATTTAAAGTTATTGACATGAAACCGTAATAATCAT
AGTTCGGACTTTTTTAAGGGGGATGACACCTTCCAAAGAAGTGAAGAAGG
GGAGGGGGATCAGAAATTTTCATTAAAAAGGGGGGATCTTTTAATTATAA
GGGAGAGCAGCGAGAAGGGGATTATCGGATCGCACTATACACTATATATT
TTCGATAATTTAGCCCAAAACCTTTGGGGGATAGGCATTTTTTAAGGTTG
GGGGGTGCCAAGAAGGGGGGATCGTTTAACAAGGGGGGTCAGACCCCTTT
CCGCACTATGATAATAATTCTTTTGGAATAACGTGTGTCCGAGTCTAAAT
CATAAGCGAATCGTGTAAGAGCAGATTTGCTTTTTCCTAAAAGAATCTCC
TGGAAACCTTTTAACACTATATCGGACCAAACTTGCCCATCCTCCGATAC
TAATAGGTGGGATACGAAAGAACTGTTTGGTTGGTTGGTCAATAATTCTT
TCTGTTTCATCGTTTAGACTAGTAGCAGCGGAGGAACAATACTCTATGAA
CCAATCAAAACTCTTGAATTTGTGGTTCACCAAAGCCAATGAAATCAAGA
AACAGTTGAGAGCTATTGAACTGAAAGGTCAACTTGCTAATGGACAAACA
AAAGATGAATTGATTACCACTCTACAAAATCTTGAGGTAAAAACGGGATT
TGTTTTTCTGTAATATTTCATATCAAGAATTGTACGATACGAAGCAGAGG
CTTCACTAAAGGACTTTTTACAATGGCTACATAACTCCATTTGGGTTTTT
AAAAATGTTTTTAACCCGCATCACCTTGTAGTACCATTTAAATATATATA
CGCTTCATTTAAGTTAGAATGTTGATTTTGCTCCTCTTCTATAAAAAAAG
AAAAACCGTATACCTTTACCCCTTAAAATCCACCAACCTGAAGTCACTAA
CTCTAACTCTAACTCTATACATTGTCACGCTTGAGACAAAACTATTAATA
ATGAAGTAGTGTCATTGTCGTCAGAAAATTTGAATTTAGTTTTTTATTTT
ACTCGATATAAGGATTTAGGGAACTCCCCAAATCTTTTCTTTACAGATGG
GCCTTGAAAATGAATAAATTATTTGAATCCTACAGAAAATCTTCCTTAAC
TACTACAAATAGTGAAAAACCTTTTTGCGAGCAAACGATAAGGAAAATGA
AGAAAAGCTAATATGTTGGCAAACATGGAATGTTTTCAGCTGAAGTAAAA
GTTCAAATATTAGTGTAAAAAAAGTGGGATGTTTCCGTGAAATAATGAGA
AATTTCGATCAGAAAAATATAAAACGGTAAGACGATATCATTTTCTTTAT
TCTTTCATCATTTTGTCTGTATGTAGGCTTCACTTGCAAGTTTAAAGGGC
CTGGAATCGACAGTGACAGGGCACGTGGACGAAGGTAACGCCCTGGTTAC
GACTACAACTAACAAAGTGAAAGCAGAGGAATTGAAAGAGGAGATCGAAG
CACTTCTTTCTTTCTATCGAGCAGTCACAGAACAAATGGAATCAAACCAT
GAAAGGTATTTAGAAAGAAAAAGAAAAATTAAAATTATAACGTAAATCTA
AAGGGGACTTTTGAAAGTAGAAAATCGTAAAAATTAACTCGAAAAAAATA
CTACTTTAAGGGCAGAAACTTTCGCGAACAGAAAGTTTCGCGAGACCGAA
AAGTCGCGAAATTTCGCGGATTTAAGCTTTGCGAATTTTACTTTTTGAAG
AAAATTTACGGAAGAAACTTTCGTGGTTTTTTGTGAATGTTCAATTTTAG
TAGCAATAACTTTCGCGAGTGGCTAGGGAAAGTGTATAAAAATTCTTTCA
GATCTCATTTTTTTCTATAATCGAAAAAGTGATATGCTAATAAATGAAAA
ATAAACTATTTGCACATCTTCCTCCCATTCCGAATCTTAGTCACTGCGAT
AATATCGATAATATCGACTCTCCTAGGCTTTTAAAACTTGGAAAAAACTT
TCGCGATTTTTAGGAAAATTTCATTTTTCGCGAAATTAACTGAAAAAATG
CCAAAAACGCGAAAAAAGCAAAGTTTCTGCCCGCGAAAGTTTCTGCCCTT
AAAGTAAACTCTCTAAAACCAATTATACAAAATTTGAACTCTGCAATTAT
AGTGGGTAACTAGTTCTTTTCAAATTGTTTTGAGAAAGTGCATCGGCGTC
GTTTTAGGGACTCAGTTTTGTAACAAAGGTTATCAAACCTCCTGTTATAT
TTCTTAGGTTCCAAAAACGTTTGGTCGAAGTCCAAGGTGAAGAAGAACAA
TTGCTAGCTCAATGGGAAGATAAGAAGAAAGAAGTTGATGAAGAATTATG
TTTTATCGAAGAACAAGTCAGCCAATTCGCTGAATTACCGGAAGACGATC
TATTATTGGAACAAGCTATCGATGATAATGAGGTTT

Coding sequence (CDS) from alignment at scaffold_60:1535840..1545525-

>TCONS_00071468 ID=TCONS_00071468|Name=TCONS_00071468|organism=Clytia hemisphaerica|type=CDS|length=1761bp|location=Sequence derived from alignment at scaffold_60:1535840..1545525- (Clytia hemisphaerica)
GCTTCAGCTCTTGATAAAGTCGAAGATGAATTGGCGGGAGTCATGAAAGA
GATCGATGATGCGCCGAATCTCTCAGATGAAAATAAAGCGCCGTTACTTG
AAAAACTGACTACATTAGTTCAATTGCATGCTGACATCAAGGAGAAATGG
GACACTTGTAAACACAGCTTTTTTGTCAAATTGGATCACCAACACGCGAA
GGAATTGCTTCTGATGACGAAATGGAAACAAAAGTCAAAATCCACGGACG
AAACGTTGACATCTCTTGAAGGGAAATTGAACGTGTTACTCTCTGAACCA
ATTACTGAGAGTAATGCAAGTAAAGTTTTGCAAGAAATGGAGACATTTGA
ATCTGAATTGAAAGGAACAGACCCTACAATCAATGGCAACTTGGATTTCG
GTCGAACTTTACTACGAAGTGGGAAAATAGTCGATTCTTCAACGAAAGAG
AGCATGCAGAGTGAGATTGATGAGTATTTCGAACGACGAGCAAAAATGGA
TGATACGTTAGATGATGAACGAAGGAAGTTGGAAAAGATTATTGAAGCAA
AACGAAATTCTGAAAGCAAAGAACTACAAAAATGGCTTGAAAAAGTCAAT
CAAGTCCGAAAAACATTACGTCATTATGAAATGTCCGGACAATCAAGAAT
CAACCGTCCGAATTCTGATTTACAAGTCTCCATTGCTGAACAGAAGCAAT
TGATTGGTGAAGCCAGCGAGTATCAAGTGGAAGTGAGCAATGTCGTTGAA
AGCGGTCAACTTCTCATGCAGTCTTTCACCGATGCTGATCAAAATGAAGA
ATTGAAAAGTGAAATTGATTCTGTTCACACTCTTTCAACTGCTACCATCG
AATCACTACAAGAAATTCTCAAAAGATTACAGAAGAGCTATGATGATCAA
ATAGCCAAGGAACTTCTCCTTTTATCCAAATGGAACGAGAAGGCGAATGT
GTTGAATACTTGGCTAGATGACATGGAACATTATTTGAACAATCTTCATC
TGGCGAACGAAAAACCCAAAGAATTATCCTCATCAAGAGCAGAATTCGAG
TCTTATCAGACCCGATTACAGTCGGAAAGCCGAGGAATGCAGTCCAATAT
TGATTTCGGTAGTTCGTTAATACGAAGTGGCAAAATATCTGACGAGAACA
ACAAAAGCCAACTACAAGTAGAGATTGATGATTTCTCTTTGAGGAAAGAT
CAACTGAATCAACAATTCCAGAATGGAAACGCTAGACTAGTAGCAGCGGA
GGAACAATACTCTATGAACCAATCAAAACTCTTGAATTTGTGGTTCACCA
AAGCCAATGAAATCAAGAAACAGTTGAGAGCTATTGAACTGAAAGGTCAA
CTTGCTAATGGACAAACAAAAGATGAATTGATTACCACTCTACAAAATCT
TGAGGCTTCACTTGCAAGTTTAAAGGGCCTGGAATCGACAGTGACAGGGC
ACGTGGACGAAGGTAACGCCCTGGTTACGACTACAACTAACAAAGTGAAA
GCAGAGGAATTGAAAGAGGAGATCGAAGCACTTCTTTCTTTCTATCGAGC
AGTCACAGAACAAATGGAATCAAACCATGAAAGGTTCCAAAAACGTTTGG
TCGAAGTCCAAGGTGAAGAAGAACAATTGCTAGCTCAATGGGAAGATAAG
AAGAAAGAAGTTGATGAAGAATTATGTTTTATCGAAGAACAAGTCAGCCA
ATTCGCTGAATTACCGGAAGACGATCTATTATTGGAACAAGCTATCGATG
ATAATGAGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044375XLOC_044375Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071468-proteinTCONS_00071468-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071468-exon-scaffold_60-1575043694:1545358..1545525TCONS_00071468-exon-scaffold_60-1575043694:1545358..1545525Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1542079..1542253TCONS_00071468-exon-scaffold_60-1575043694:1542079..1542253Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1541601..1541785TCONS_00071468-exon-scaffold_60-1575043694:1541601..1541785Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1540934..1541102TCONS_00071468-exon-scaffold_60-1575043694:1540934..1541102Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1540424..1540602TCONS_00071468-exon-scaffold_60-1575043694:1540424..1540602Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1539772..1539946TCONS_00071468-exon-scaffold_60-1575043694:1539772..1539946Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1538305..1538489TCONS_00071468-exon-scaffold_60-1575043694:1538305..1538489Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1537590..1537758TCONS_00071468-exon-scaffold_60-1575043694:1537590..1537758Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1536721..1536899TCONS_00071468-exon-scaffold_60-1575043694:1536721..1536899Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1575043694:1535840..1536018TCONS_00071468-exon-scaffold_60-1575043694:1535840..1536018Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1545358..1545525TCONS_00071468-exon-scaffold_60-1510915933:1545358..1545525Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1542079..1542253TCONS_00071468-exon-scaffold_60-1510915933:1542079..1542253Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1541601..1541785TCONS_00071468-exon-scaffold_60-1510915933:1541601..1541785Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1540934..1541102TCONS_00071468-exon-scaffold_60-1510915933:1540934..1541102Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1540424..1540602TCONS_00071468-exon-scaffold_60-1510915933:1540424..1540602Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1539772..1539946TCONS_00071468-exon-scaffold_60-1510915933:1539772..1539946Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1538305..1538489TCONS_00071468-exon-scaffold_60-1510915933:1538305..1538489Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1537590..1537758TCONS_00071468-exon-scaffold_60-1510915933:1537590..1537758Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1536721..1536899TCONS_00071468-exon-scaffold_60-1510915933:1536721..1536899Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1510915933:1535840..1536018TCONS_00071468-exon-scaffold_60-1510915933:1535840..1536018Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1545358..1545525TCONS_00071468-exon-scaffold_60-1491911889:1545358..1545525Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1542079..1542253TCONS_00071468-exon-scaffold_60-1491911889:1542079..1542253Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1541601..1541785TCONS_00071468-exon-scaffold_60-1491911889:1541601..1541785Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1540934..1541102TCONS_00071468-exon-scaffold_60-1491911889:1540934..1541102Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1540424..1540602TCONS_00071468-exon-scaffold_60-1491911889:1540424..1540602Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1539772..1539946TCONS_00071468-exon-scaffold_60-1491911889:1539772..1539946Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1538305..1538489TCONS_00071468-exon-scaffold_60-1491911889:1538305..1538489Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1537590..1537758TCONS_00071468-exon-scaffold_60-1491911889:1537590..1537758Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1536721..1536899TCONS_00071468-exon-scaffold_60-1491911889:1536721..1536899Clytia hemisphaericaexon
TCONS_00071468-exon-scaffold_60-1491911889:1535840..1536018TCONS_00071468-exon-scaffold_60-1491911889:1535840..1536018Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1535840..1545525 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.73672	3.74243	10.8803	9.36244	44.6418	34.2455	25.6532	29.0448	16.3912	20.0836	8.63518	10.9948	10.5466	10.7169	6.57972	7.2006	15.0175	13.2752	14.5138	21.3108	26.9274	23.8926	13.2152	22.3161	34.4142	25.2886	6.46423	5.75269	1.10194	1.34981
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071468 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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