TCONS_00072032 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072032
Unique NameTCONS_00072032
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4205

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072032 ID=TCONS_00072032|Name=TCONS_00072032|organism=Clytia hemisphaerica|type=transcript|length=4205bp
gccACACTGTTCGGTGGCTCTCGAATGGCGGCGTGGGTAtattaagtgat
attttaaggaccagctagaaaatattgagaaattgaagaccagaaaaaat
tgaaagagagGCTCCCACGACGTCCTGTGCTACGACCACCTGTCCCACGA
CGACCTTCGAAGGACGCCGCTCCCACCCACGACGACTCTCGAGAGTCGGC
GCCCCCAACCACGACATCCTTCGAAAGACGGCGCCCCCAACCACGACTTC
TTGTTTTCAACCGAATTATGAGCCGAAACCCCCCTCATATAATACGGCTA
GTTTCGGCCTTGGCGATCCAGCTGCAAGGGCGCACAGAGGCGCAcagtat
tatatttttttcataatggtAGCACAAGCCGCGGTGAACAACTGGgaatt
ttttgaacaaaacGATAGTCACAGGTTTTTCTGCTGAATAATCTTCTGAG
TCTTTTTTAATATAGTGCAGAGTTTGCACTTTTCGAACTATGAAATATGA
GTGTTGTTAATGGTACTTGAATTCCACCGAACAGAGCTTCAAACTGGAAA
GGAAATGGCAAGCAAAAGTGATAGCTaCCAGACATTTGGGAGTTTCAGCT
TGGTCAATGGAGTGATGGTCAAGATCAGTGATAAATATCTTGCACCGCCA
AAGATAACATTACCTGAGCACTTCAGAGAGATTGACCCTACTGAACTTCT
ACAGCTACAGTATGATTTTACGAAAGAAAAGAATGCCATTTTACAAGCGG
AAGATGAACGCGCCAATCAGTTAAGAATTCAGCAACAAAAGGAACTTGAT
GCCaagAAGAAACAAGAAGAAGAGGAAAGGCAGGAgcgagaaaaagaaga
aaaagaacgtCTTCTTCTTCAACTACAACAGCTGGAAAAAGCAAAGGAAG
AAAATCTTCCTTCTCAAGAGAATGATAACCAAACAGCTCGGCCTGTTACT
ACAGTCGAACAACCAAGCAGTAGTTATGTTGCCGATATACCTGCTCAAAC
AAAAGTTTCTCAGAGCACGTCTGCTTCTCCATTTGCCATCTTGACGCCTC
TTGTGGTATCCAGCAATACCAGTCAACAGAACGCTGCATCTTTTTCTTAC
GTCAAACATGATAATTTCAACATGTTTGACCCGTTAGAATTCGATGCACA
AAACGATAATCCTTTTGAATCTGTAGAGAGGGACACTTTGAATGAATTGG
ATGAATTAAGGAGTGTTTTGCAACCGGAAACTCAACCTGTCATCGAAACA
TCACCCTTCAAATCAGACGAGGGTCATACTTCTCACACCGAGTTTGAACT
TAGCTCAGTATTTAACCAACCTTTACCTCAGCCAGTGACTACTGTAAACG
AACTACCAACGGAAAATATTATCGCCATTACTGATATTGAGACTTCCACT
TTTGTTTCTCCCTCTTACCTTGTCGACCACTTCGCCTCCATTCCACATCA
TACTTCTAAAGGAACGTTAAACTGGACAGGCTTTTCATCACCTCCTTCAA
CTCTCAATCAAAATATGAACCCTTTTGCATCCAATAATCCCTTTCAAGCG
AACTTTCAAAGTCTTGATTCATCTCAAAATGATACACCGAGTCAGATGTC
GTCCAAAACACCACCGCCAAGTTTACACTACGTTGATGGAGTACGAGCAA
ACATTGAAAATACGAACCTTGAAAATCAAGGGATGACGAATTTACAACGA
GCGAAGTCTTTACCGAACCTCGATCAAGCGAATCAGCCAGGTCCTACTTT
TGAATCTCCATCACCTTATACAATGGAAATGGAAAATGCACCGGTGGCCA
CAGATCGAATAGAGAATATCATGAAACAGTTCAACTTTCAACGGATGCCA
CAAACCTCATCTCCCAATAGTCAAGTACCAAAAGAAAACTCTATTGTAAA
CGATACTACTTCTAATACTTTCTACAGCACTAATTTATCAACAGACAGTG
CAGTACAACAAAACTTATTTCCAACGTCCTACAATCAAGCGATTGCGATG
CCAACCTCGTCGGCAAATAGTTTAATTTCTCAACCGGCAAATACGCAACA
AGACTACATGAACTACCAACATCAGGTGTCTTTGGGAAGCGTTCAAACAA
ACCATCAAATGACACCAGATGCTACAGACTATAACGCGGGAGGACCTTTA
ATGGTACATTCCAGAATACCACTCCATAATAGTGGAACAAATTTAAATGC
AAATACTGTTACGTCAGACTCTATAATAAACTTATCGTCGAATACTGGAA
ACCCCATTCCTTCATCATATTCAGGACATCCACCATCAACTAATGTAGGC
GCAGTTAATCGTGTTTATGCCGTTCCTACCTTTGGGAATGCTATTAGCAA
CTCACCAACAAATTATTCCCATATACCAGCCAAcaataatttacaaaaaa
atcttcCTTACAAGAACGGCGAGGTAAATTCCTCTCAGCCTGTTATTCCT
AAACCTCCACAAATGACTTTACCAAAACAAGGCGTACTACCTGACTTGAC
TGGATCTTTATCGACAAGTGAACGAAACTTTGCTGATCAATTGAGCTCAA
TGGGCTTTGATGGTCCTTGTGTTTCAAGAACTATCAAACGATTGGGAATG
GACGAAAAAGAGgttttggattttttggTTCTTGTAGAAGAAGTGAAAGA
TCAGTCCAAATGCAACGGAGAAGACGTGGAAATCGCTCTCCTTAATaatc
aaaatgataaaactAAGGTCAAAACGTATCTAGAGATGGTTGCGACTTTC
AAAGAACTCGGTTTTCAAACACTCAAAATTCACGAAGCGTTGAAAATGAA
CGATTGTGATCAACACAAATCATTGGACCATCTGACGAGGTAGCATTGTC
TCTTCTTCATTGTGGTAGCATTGTCACCATGATTTTGCACTATGGTATTA
TTGTGGCTTTCGGCTAGTTTTATGGTTTAATGCTTTTCCTTTTTATCGGG
TAGATTGCTCCATTTCTTAtagtttccaatttttttattcgaaaaatgaa
aagaagtaTTTATTGTTGTTCGATATTTTACCTCTAAAATCATATATATT
ATCGCTTGTTTTCAAAAGTCTCTCttttattgcttttttaaaGTTTGGGT
CCTGAAATAATGATTTTAAACGCCGGTTGCTTTAGCtcgaaaattatgat
ttttgggtcagACAATGAATATTTTAGTATGACATTGTCCAATGTCCGAC
CCTTGTTTCGAGTCCAGCTATTTTATTTGAGGATATCACTAAAGTCACAT
ACTTGAGGCGCATAAATTATGaaagattcaatttttttgagggATTACAT
ttctttaaatgaaaaatgaagtgaATTTTGGTTTGTTATTTTAATGTGCA
TATTAGGTTTTTCTTAATGTATCACTGTCACAAGTAGATGATTCCTGTCC
CACTTACTAGCTGACCACTTCTGAGCGCTATCTGGTTCATATGTACTAAG
TAGTGTAGATTTTGCTAAATAGAGCGCCAAACTAAAGTAAATAGTAAACT
TTACTTCCTTGTTACCGTCGTTTTTGCCAAACAAGTGTTCTCTTGCACGG
AACCAAATTTAATCGGTCTCTCCTGTGAGGATAAAGAGTATCGCGCCGGG
GCATTGATAAGGAATTTATGTAATTATCATCTTttgtattcaattttcat
ttattatgCTAGGGGATGCATTTATTGCATTTATCCATAATCTGGAAATC
GGGCGGAAATATTCTAGAACGTTTGGTaatggaattaaaaaaaattcctt
gATAAGGGTAGAAGAAGCTGATTTTCTGATTCTTTCAAATACAGCAGTAA
AACTCCTGGCTCGTCGAAGATCTAAGGTTAACAGTCCATCTAATTTCTAT
TACGTCCATGGTTAGAGGGATACTATAGCCGGGCGTTTATAAACTTACGT
CATGTAATATGTAGCATTACTGCAATGAaaccatttcaatattttttccc
tTTAGGTAAATTGTTTATCTTTTTGTacagaatatttttgtttttcataa
ttattaaatgataaagaattttctttttattagtcAGACCTGGTGACTCT
CCCAATCAGttctatgatttttttcttacataattgttcccgtttcatat
cagacacatatttcatattaggacagtgtattgttatattgtgctaaggc
gaggccaatttaatttgttgttttacgggccaagctacccaaaaagaggg
tcggt
Run BLAST on NCBI

protein sequence of TCONS_00072032-protein

>TCONS_00072032-protein ID=TCONS_00072032-protein|Name=TCONS_00072032-protein|organism=Clytia hemisphaerica|type=polypeptide|length=777bp
MVLEFHRTELQTGKEMASKSDSYQTFGSFSLVNGVMVKISDKYLAPPKIT
LPEHFREIDPTELLQLQYDFTKEKNAILQAEDERANQLRIQQQKELDAKK
KQEEEERQEREKEEKERLLLQLQQLEKAKEENLPSQENDNQTARPVTTVE
QPSSSYVADIPAQTKVSQSTSASPFAILTPLVVSSNTSQQNAASFSYVKH
DNFNMFDPLEFDAQNDNPFESVERDTLNELDELRSVLQPETQPVIETSPF
KSDEGHTSHTEFELSSVFNQPLPQPVTTVNELPTENIIAITDIETSTFVS
PSYLVDHFASIPHHTSKGTLNWTGFSSPPSTLNQNMNPFASNNPFQANFQ
SLDSSQNDTPSQMSSKTPPPSLHYVDGVRANIENTNLENQGMTNLQRAKS
LPNLDQANQPGPTFESPSPYTMEMENAPVATDRIENIMKQFNFQRMPQTS
SPNSQVPKENSIVNDTTSNTFYSTNLSTDSAVQQNLFPTSYNQAIAMPTS
SANSLISQPANTQQDYMNYQHQVSLGSVQTNHQMTPDATDYNAGGPLMVH
SRIPLHNSGTNLNANTVTSDSIINLSSNTGNPIPSSYSGHPPSTNVGAVN
RVYAVPTFGNAISNSPTNYSHIPANNNLQKNLPYKNGEVNSSQPVIPKPP
QMTLPKQGVLPDLTGSLSTSERNFADQLSSMGFDGPCVSRTIKRLGMDEK
EVLDFLVLVEEVKDQSKCNGEDVEIALLNNQNDKTKVKTYLEMVATFKEL
GFQTLKIHEALKMNDCDQHKSLDHLTR
Run BLAST on NCBI

transcript from alignment at scaffold_69:93310..106686+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072032 ID=TCONS_00072032|Name=TCONS_00072032|organism=Clytia hemisphaerica|type=transcript|length=13377bp|location=Sequence derived from alignment at scaffold_69:93310..106686+ (Clytia hemisphaerica)
gccACACTGTTCGGTGGCTCTCGAATGGCGGCGTGGGTAtattaagtgat
attttaaggaccagctagaaaatattgagaaattgaagaccagaaaaaat
tgaaagagagGCTCCCACGACGTCCTGTGCTACGACCACCTGTCCCACGA
CGACCTTCGAAGGACGCCGCTCCCACCCACGACGACTCTCGAGAGTCGGC
GCCCCCAACCACGACATCCTTCGAAAGACGGCGCCCCCAACCACGACTTC
TTGTTTTCAACCGAATTATGAGCCGAAACCCCCCTCATATAATACGGCTA
GTTTCGGCCTTGGCGATCCAGCTGCAAGGGCGCACAGAGGCGCAcagtat
tatatttttttcataatggtAGCACAAGCCGCGGTGAACAACTGGgaatt
ttttgaacaaaacGATAGTCACAGGTTTTTCTGCTGAATAATCTTCTGAG
TCTTTTTTAATATAGTGCAGAGTTTGCACTTTTCGAACTATGAAATATGA
GTGTTGTTAATGGTACTTGAATTCCACCGAACAGAGCTTCAAACTGGAAA
GGAAATGGCAAGCAAAAGTGATAGCTGTaagagagaattttttttacatt
ttttatatttatatagaCTAACAACAAATTTGCTTtcataactccaccaa
gtttatcaatcatactttctgtcataacatgtcacaataactttcactaa
TAGTGGgctctttttaaacgaccctgcctatgccccggacagtccggggg
gtttttttgatgcgtgcccggggtccgtattatttgtttttgagagacta
ccccggacgccccagacagcccgcacggtcgctttttatagaatcgctga
ccgcgcgggcttttttctaattcattgaaatattcttccgtggacaaacg
ccgtcttccaaaagatcttgtaatgtattgattttggcgtttcgtgtgtg
aggcctgtatttgaaccttaaatctcaagcgtggtttgttcagcaatcaa
attctaaaatctaaccaaaagctgaaaaatggatcctgatcagactgaga
aaggtaagtaaagttagtttttttatttttaattaatttattaaccTTGC
CTAGTTTATAAAACCTGGATAAAATGTCCGGGGGTTTAAAGTGTGCTCGG
cgatatacgtccggggtaaatttatggcgcaaaaattggagccccggacg
taggtccggggaaaaagttatttttttcagaccccagacatttgccccgg
actgtccggggcataggcagggtcgtctttttaactttttgttttcattc
aaaataaccagacgctgattggagaattaTAACGCCTGCCGCCTAGCTGC
CTAACCACCTAACCGCTTATCAtctgatgggattaacaaataacaagtgt
gtaacttgcgGTGCGAGTGGCGTCGAACGGTCCATCGTTTtaccactaat
ttggtcttctttgttccagacattcgagtgtgttccactacgaccctcga
catggcccgagaattctcgggcctcttcgggccatgttcgggccgagaga
ccctatcaattattttggcccgaacatgacccgagtcattcgggccatgt
tcgggccgtgTCAGGAAATTCCATAAANaacatgacccgagtcattcggg
ccatgttcgggccatgttaaatgttaaattgattcagcatgtccagtcaa
acaaaatagtacaaaataaaNNNNcaaaaaaactttacgagcttcccgtg
gacacgcttcagtttaaaaccaggaccagtttactagcaaatatttccac
cctaagtatatttataactatgatttcataccaaataagacatttaatat
ttatatgaatttacaacattcatatatttaatataattaagagaaaccaa
gtttttctcaaagaaaatgttaaaaaaattcagtcctgaaattacacacC
TGTTtgaatcatgttttcaaaaattggcttGAGTGTGGCCCGTacgtggc
ccgcgtgtggcccgaacacggcccgaattctcgggccagctcgggccata
ctcgggctttacgggaattccaataaaagttttggcccgagaattctcgg
gccatgtcgagggtcgtgttccactacggattttttcatatttcgattta
aaagcctatactcggtgcgaaagagaagtcgtgtattttttaatacgccg
ttcattaactcacaaatcaaatgactttggaggtttggtgaaatggtgat
cgaattgctgtcccatgttttgtcagatagtcccaagttagagcagttga
cggtatctaGCCTTgtacttttttgttttggtctaaaattttcAGGAGTA
GTTAGTAGATTCTTCTATTATCGACACTCCTTCTTTAATCCCTACATGGC
TGTACGCTggtcttcaaaacaaaaatcaaatataaacaaatatatacATC
ATATCATGAACAATGACCTTATCTGAGGGANCGGgctttttgcttattgc
taTGTTAAGTTTTTAGCCTTTTCGATTTGTAGTAATTTGCTTCTGAAATG
TGCAATTACTGTCCATCAGGATTCCTAGGTCTTTCACAACATCTTTGTNA
ATTGGAAGATGGTACATGTGACTCCAATTTATAAAAACAAGGGTGCCCAA
AGCCTTGCGATAAATTATAGACCTGTTATTTTGACTTCAGTAGTCTGTAA
GTTAATGGAATCATTTATAAGAAAGCACATTATGAAGCATCTAACTGGCA
AAAAGCTTCTAACCAACAAGCAATATGGTTTCATTAGTCGCCGCCGCACC
GTCACACAACTCCTAAATTATTTGGACGAGTACTGTGAAAGTATAGCTAA
TGGAAGTGTCATTGACACTataccttatcagggaaaacttcgtcagggaa
aagtgacgaaattttggcaaagtgacaaatatttttccCGACGAAAACTT
TCCCCGGCCTTAGTgtgtttaccaactaccagcaagtgacgaatattttt
ccccgacgaaaattttccccgacaaagttttccccgataaggtatttcgA
TTTTGTAAAAGCTTTTGATACTGTTCCCTATCGCCGTCTACTTAAAAAAC
TTAAATGATATGGAATACCTGGAAACATCTTGAGTGGCATCCCCAAGGAA
GTGTTTTGGGACCACTTCTCTTTGTTATCTACATCAACGACCTGTCTCCC
TGACAATGTGCTGTCTTCAATTCTCCTATTTGCTGATGACGTGAAGATTT
TCAGAGAAGTCAACGCGATTGAGGACTCATGGGCTATCCAACAAGACATT
CACAAACTTGAAAAGTGTTCAAATGACTGGCTATTAAGATTTCACCCAGA
TAAGTGCCACGTTCTCACTCTcggtaaatattggaatattgtCCACGCGC
ACCCTTATTCACTTAGAGGTGAACaacttgaacatgtttttgttgGAAAA
GATATTGGTGTTCTGATAGAATCTGACTTATCCTTTGAAGAACATATatc
aaaacaagtgaaaaaagcAAATTTCATTCTAGGAGTCATCAGAAGAGGTT
TCAAAGACCTAAgccttaaaactttttttcactcTGAACACAACCTTTGT
CTTGCCTCATCTTGAGTACAGTATGCCCAATCTGTATGGTCACCAAAACT
ACGTAAGGACACCAGCTTAATTGAGGGCGTTCAACAACGTGCCACTAGGA
TGGTCAGAAGTTTAAGTAATCTGCCATACAAGCAGCGCCTAGAAAAACTT
GACTTGCCTTCTCTCAAATTCAGAAGACACTTCAGAGACATGGTTCAGAT
CTACAAACACTTGCATTTCTACGATAAGGGCACCACAGTTGGAAAGTTTA
GACTTCAAACTAGCAGACAATGGATTCAGAGGTGTCTAGACCAAGTCGTT
TTATTATCGATGTGTGACAGCATGGAACCAGCTACCAAAGAAAACAGACC
GTTAATGCTACTAGCATCAAAGCGTTCAAGAAAGAACTAACCAAGGCATA
TGGAACATCCATTGTGCTACGAATCAAGATCTTTGTAATCGAAGATGATA
AATTGGTTTAGAGGCCCTtgtgtgcctggactgtaaatctccctaaataa
ttaaataaaaaacatatcaAAGTTACCAATCAATCAGTAAATTGCATCAC
GTCACAGAATGCCGATGAAGTcacattttcttgaaaagaaaactttaaaa
atgtgGACAtcactaaaaactaattagaAACCATTTTCTACGAAGATATC
AAAAGCAAAACCAATTTTTGCAcacaaggaattttttagtagaccttttt
actgtgaaccaaaattgataaaaagaaccTAAAAGTTTGAATTTATGTGT
CGTGTAAAATTACTCCTCAggctgatttttctttttgaaagaattttgca
atgtttactgaacttttattttgatggatgaacttgtttgataaggataa
taagaacaatttcattaattcaaggtttgttttgatttttttgcagaaat
gGCATCGAGATTTAAGGTGGGGTGTGGATAATAGACGAATTTACGGTACT
AGACTGTCATGTTGGATAATTAAAAAATCCAGCAccaaaacaatgataag
aaaaatATCAGTGCCCACTTTATGCATCATTAATGTGTCATTGTATCAGT
GCttaagtttttaattattcaacatgacattctGACTAGCAAAAGGTCTT
TCATTAACATgaaagtttttggacctacctcgagATCTGGGTACCCCAGT
GGAGTTCCTTTAATTTAACCCATGTTTTccgtttgtccgttcgtctgtta
ccagcttttctcgggattggctcattacttttttttccggccaaaaatgc
cggaaatatgccggaaaaacgagtttttttggcattttctcgagatttta
tcattagttttttcggattttttgctcaaagatgcgaataaacaatgccc
aaaacatgacctACTGTAGtccgattttttagaaaaaatttcttccggcc
aaaaatgccagaaacatgccggaaatcactgtttttctggattttcatta
gactttttccttatgatggcattcaaaaattgcgtgaggttttcaaaaac
agcaaaaaaaaagaaatttgaatatcctttttaaaaataactcttttcaa
acgaaacttcacaatattggtTCTAAAGGTGATATAAGTaggttgaaaaa
tgtttttttgtaaaatgggccaaaacTGTGacacaaatcaagaaaaacac
tatgttgataaaacagcagccacaaatttgttcaatgagtaaaaatcatt
tttttcagatgaaactcgtagcaaaagggtttatccaTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagccacaa
attaaacccataagtatctttataagACATTAAACTaccaaattcaagaa
aaatggttaaaaaatattgaagtcttaaagcCGGACAGCACACATGAGCC
AACCCTAAAAATGCCAACTAATACTTATATGTAACAGCTCAGAAGGGTTT
ATgtacaaaaaatggtatttgcagccacaaaatgtacactttttcttaaa
ataacactgtattgtgtcagattgtgtttgttttgcatCAGGCTTTGCAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTACTACACAGCAGCCACAAGAATATCAACGCTGTGGGC
TAAAAAGTGGCTGtgattgaaaacctcactttttggggttctatttttga
atgcaatcttataattggttgttttttcattcaaaaacattattaatagc
aatgcccaccatcaagttGTCAGTTGTTTCAGttgtcaataaaattgatt
tttgttttgaacccggcactatttaaaaatcgcctgAACAACTTATTTTC
gtcggaaagacagtatttttttaatttctcgagctgtactttatattttt
ttatgaaattttgcacactgatgcaatatgacaatacctaaaatgtggca
gagcccgattttcgaaaaacattttttctggccGAATATGCTGGAAATAN
acactgatgcaatatgacaatacctaaaatgtggcagagcccgattttcg
aaaaacattttttctggccgaaaatgctggaaatatgccagaaaaactgg
ttttttgacatttactcgaattttcatccttagtttttctgattttttgc
agaaaaatgcgtatttgcaatgctcaaaacatggccgagttcgatttttg
agaaaaaaaattttccggttgaaaatgccggaaatcgtcgtttttgcaca
ttttcattgattttttccttgtatttctatgtttttcacacaaaaacatt
attgataacaatgctcaccatcaagcatgattcaattgtcaataaaactg
attttgcgaccagaactttctatttattttttccctacaacccttcccaa
caataatcaatgatgaatttattgcgttatgcatatattttctgacagat
ttttttcatttttcttctcgcattgctatctaactttcattaTCAGGTAG
GTCTATAAGTATTTTCAGTGGTGTCCTCTACTTTGTGCGCCTAACTCCCG
AGACTGCAAGTAAAGTGAACTGATTGCCttatactttcctccaaaattct
ctaGCGAGAAAAATAATGAGTCTGAACTTGCGCGTacagcaaacttgagt
tctactaaaaagtcttatttcagcAGGCGAGCCttggaatttcttttgat
acattctataaaagaaatcaaaagacctAGACAACCAATTACTGATAAat
tctcctgtttttctttatatcaCCATCTCTACCTGGGATATCATCTGCCT
GGCAAGTTAAGAGAAAGTTAAAGatgtcatgctttattagaaaggATGCG
TGCTTCGTATGCTGGCAGAAATAATTACCAAAAGAATTGCTCAATCTTTG
CGTTGGGCAGGAGTAGAAGAAAGTTGTTCTTTTGCTCAAAAAATAGTTTG
TTGtgtaaacaaaatggtagatatGTTTATATGATGTCCTTTTAATAATG
gattattattttctttagaCCAGACATTTGGGAGTTTCAGCTTGGTCAAT
GGAGTGATGGTCAAGATCAGTGATAAATATCTTGCACCGCCAAAGGTACG
CTTTATTTTAATAATTCCAAATCTTTTAAGATCTAAACTGCTATGTACTT
GAGTAGAATAGATTGTTTTCACAACCATCGAAAAGAAAGACTGAGATATT
ATAAAAGCTATACGTTATTTTACTATTATGGAGAGGTCAATCTGGCAACC
TTTCCTCTCCTATTTCTTTATTGAATTTCTTACCCTTTTGATATTTTAAG
ATCAAGTTCAGTATGTTACAACACTAATCCTTTATAGATAACATTACCTG
AGCACTTCAGAGAGATTGACCCTACTGAACTTCTACAGCTACAGGTGAGA
GACTTTCATTTTGAATACATAATCATGGTTTTAGCTCCACTCCCCCCAGA
TTTATAAAAATGAACCTATGCCTAGTCGTTAGTTGGAAGCTAAGATTCAG
TAATCTGTGTGAGTTATTACCTGCTCGTCGGGGATAATgtttgtctcaat
ataatctgcagtaGTGGAGACAAAAACGGTTATAATTTTTGACACAATTT
GAACTAGATAGCGGCTTTTTGtgatcgttgaaaagataatcaaaatgatc
aaaatattttgtcattttgtttCAGTATGATTTTACGAAAGAAAAGAATG
CCATTTTACAAGCGGAAGATGAACGCGCCAATCAGTTAAGAATTCAGCAA
CAAAAGGAACTTGATGCCaaggtatgaaaagaaacaATATACTCACCATT
TGCGATTGGTAATCACTATTCTTTGATTCCTTTTCGAGTAATATCTGAAG
TATCAACACAGAACGGGTAAGAAAAATTTGTGAAGAGTCCGTGATTTTCT
TTGTACAGATGCTCTCTAAGAGATAATGTAAATTGAGATTTGAAGTCata
ccaaaatatttttaacccaACGTCACAGTCTTGTCCGCCATATTTATCTC
AACCTGGCGACGTCAGAAAAACAGAGGTCAATCTCTAtaatttagataaa
aaatgacGAAATTTAAAACGACGTTACAGGGTTGAGACAATTTTTTTCCA
CTGTTTCGAATTTCGATCAGTCTATATTTGAGAGCTTCTGTGCCGAGAAT
CTCTTTCTGAGTTTCAAGTTTGATTTAAAACTTGTAATAGTATTGAGACA
ATATAGGTATTTTTTTTATGATGAGTTTGCGTTCCTATTTCTTGTAGTGT
CGCACGTATGCGGTGTTGATTACATGTGAATGCTTCGATATTAATAGAAT
ACTATTTTGACTACTCGTTACTAGTAGCAAGTTTCTGGTCAGCATTACTC
TTAGAAGTAATTTTTTCGTTTTGATTTTCAGAAGAAACAAGAAGAAGAGG
AAAGGCAGGAgcgagaaaaagaagaaaaagaacgtCTTCTTCTTCAACTA
CAACAGCTGGAAAAAGCAAAGGAAGAAAATCTTCCTTCTCAAGAGAATGA
TAACCAAACAGCTCGGCCTGTTACTACAGTCGAACAACCAAGCAGTAGTT
ATGTTGCCGATATACCTGCTCAAACAAAAGTTTCTCAGAGCACGTCTGCT
TCTCCATTTGCCATCTTGACGCCTCTTGTGGTATCCAGCAATACCAGTCA
ACAGAACGCTGCATCTTTTTCTTACGTCAAACATGATAATTTCAACATGT
TTGACCCGTTAGAATTCGATGCACAAAACGATAATCCTTTTGAATCTGTA
GAGAGGGACACTTTGAATGAATTGGATGAATTAAGGAGTGTTTTGCAACC
GGAAACTCAACCTGTCATCGAAACATCACCCTTCAAATCAGACGAGGGTC
ATACTTCTCACACCGAGTTTGAACTTAGCTCAGTATTTAACCAACCTTTA
CCTCAGCCAGTGACTACTGTAAACGAACTACCAACGGAAAATATTATCGC
CATTACTGATATTGAGACTTCCACTTTTGTTTCTCCCTCTTACCTTGTCG
ACCACTTCGCCTCCATTCCACATCATACTTCTAAAGGAACGTTAAACTGG
ACAGGCTTTTCATCACCTCCTTCAACTCTCAATCAAAATATGAACCCTTT
TGCATCCAATAATCCCTTTCAAGCGAACTTTCAAAGTCTTGATTCATCTC
AAAATGATACACCGAGTCAGATGTCGTCCAAAACACCACCGCCAAGTTTA
CACTACGTTGATGGAGTACGAGCAAACATTGAAAATACGAACCTTGAAAA
TCAAGGGATGACGAATTTACAACGAGCGAAGTCTTTACCGAACCTCGATC
AAGCGAATCAGCCAGGTCCTACTTTTGAATCTCCATCACCTTATACAATG
GAAATGGAAAATGCACCGGTGGCCACAGATCGAATAGAGAATATCATGAA
ACAGTTCAACTTTCAACGGATGCCACAAACCTCATCTCCCAATAGTCAAG
TACCAAAAGAAAACTCTATTGTAAACGATACTACTTCTAATACTTTCTAC
AGCACTAATTTATCAACAGACAGTGCAGTACAACAAAACTTATTTCCAAC
GTCCTACAATCAAGCGATTGCGATGCCAACCTCGTCGGCAAATAGTTTAA
TTTCTCAACCGGCAAATACGCAACAAGACTACATGAACTACCAACATCAG
GTGTCTTTGGGAAGCGTTCAAACAAACCATCAAATGACACCAGATGCTAC
AGACTATAACGCGGGAGGACCTTTAATGGTACATTCCAGAATACCACTCC
ATAATAGTGGAACAAATTTAAATGCAAATACTGTTACGTCAGACTCTATA
ATAAACTTATCGTCGAATACTGGAAACCCCATTCCTTCATCATATTCAGG
ACATCCACCATCAACTAATGTAGGCGCAGTTAATCGTGTTTATGCCGTTC
CTACCTTTGGGAATGCTATTAGCAACTCACCAACAAATTATTCCCATATA
CCAGCCAAcaataatttacaaaaaaatcttcCTTACAAGGTAATTTTCCG
TATTTCAATTTACAATCTTTagaattatttttgtattttaagcATGCAAT
GGATTTCAAATCCCAACCCAGTTTTCCCGGTTTCTACAATCAATGCAAAA
TTCGTGGAAAGCCAATCGTACGGAAAGAAAGAGAAATGACAATGATATAT
GAACATCCCCGAgctttttgaagatttgaaCGGCCTACATCGAacattag
agagtgtcaactttACTGTAGTGTAATTTTTATCACGTTTTTATTCCAAT
TCTGATTTTTGACGCACCTTATTATAATACTGTTGTTCATGTATCCGTTT
CAATTGTCTTTAGAACGGCGAGGTAAATTCCTCTCAGCCTGTTATTCCTA
AACCTCCACAAATGACTTTACCAAAACAAGGCGTACTACCTGACTTGACT
GGATCTTTATCGACAAGTGAACGAAACTTTGCTGATCAATTGAGCTCAAT
GGGCTTTGATGGTCCTTGTGTTTCAAGAACTATCAAACGATTGGGAATGG
ACGAAAAAGAGGTAAAGCACACATCCACACGTGTAAACTCGTATCACTTT
GTGGTTGCTACACTGTAACCAAAGACCAGCCACTGATATTAAACGTGTCC
TTGTAAAACCAAACTTTGTTGATCTGGCGCTCGTTTCGTAAACCCTTTTT
TATTAAGAAATATAAATTTAATTTGCTTGCAGTATTTTTAAGCTTCAAGG
AGGGGCTGATTTATGATATGGTGACTATGTTTCATGCGGTATGAGGGTTG
AGATACAAATTTCCTTTACATATTGTTGCTCTCAGTTTCTTATCCCGATT
TCGTGTTTCGTTtaggttttggattttttggTTCTTGTAGAAGAAGTGAA
AGATCAGTCCAAATGCAACGGAGAAGACGTGGAAATCGCTCTCCTTAATa
atcaaaatgataaaactAAGGTATATAAACGTCCTCGAAAGAGGCACTTA
CGCCCATTGTAGTAAGTATGAGTATTTGCCGACTAAGGGGTGCCTTTTGA
ATCGTTATTTATTATCGTAGAAAATATCTAATATTTGCCTCACCTCTTGG
ACAGTGGTAGAGAATGCACTCTATTCGGCCACCTCCTGAAAAGTATTTTT
GATTATGTTTATTCTTGATACATTTTCAGACCCTCCAATTTTTCAGAAGA
TTTTGTaatgtgtcaatatttttcttgcCAAAAATTAGTTTGTTCCAACT
CTCCAGGTTGGAGAAGTTCAATGTATGAGTTTGGGAGGTTTGCTACCTAT
AGTTTTATCAAATCAATTCATTTGTCCCTTTTCCATCAGGTCAAAACGTA
TCTAGAGATGGTTGCGACTTTCAAAGAACTCGGTTTTCAAACACTCAAAA
TTCACGAAGCGTTGAAAATGAACGATTGTGATCAACACAAATCATTGGAC
CATCTGACGAGGTAGCATTGTCTCTTCTTCATTGTGGTAGCATTGTCACC
ATGATTTTGCACTATGGTATTATTGTGGCTTTCGGCTAGTTTTATGGTTT
AATGCTTTTCCTTTTTATCGGGTAGATTGCTCCATTTCTTAtagtttcca
atttttttattcgaaaaatgaaaagaagtaTTTATTGTTGTTCGATATTT
TACCTCTAAAATCATATATATTATCGCTTGTTTTCAAAAGTCTCTCtttt
attgcttttttaaaGTTTGGGTCCTGAAATAATGATTTTAAACGCCGGTT
GCTTTAGCtcgaaaattatgatttttgggtcagACAATGAATATTTTAGT
ATGACATTGTCCAATGTCCGACCCTTGTTTCGAGTCCAGCTATTTTATTT
GAGGATATCACTAAAGTCACATACTTGAGGCGCATAAATTATGaaagatt
caatttttttgagggATTACATttctttaaatgaaaaatgaagtgaATTT
TGGTTTGTTATTTTAATGTGCATATTAGGTTTTTCTTAATGTATCACTGT
CACAAGTAGATGATTCCTGTCCCACTTACTAGCTGACCACTTCTGAGCGC
TATCTGGTTCATATGTACTAAGTAGTGTAGATTTTGCTAAATAGAGCGCC
AAACTAAAGTAAATAGTAAACTTTACTTCCTTGTTACCGTCGTTTTTGCC
AAACAAGTGTTCTCTTGCACGGAACCAAATTTAATCGGTCTCTCCTGTGA
GGATAAAGAGTATCGCGCCGGGGCATTGATAAGGAATTTATGTAATTATC
ATCTTttgtattcaattttcatttattatgCTAGGGGATGCATTTATTGC
ATTTATCCATAATCTGGAAATCGGGCGGAAATATTCTAGAACGTTTGGTa
atggaattaaaaaaaattccttgATAAGGGTAGAAGAAGCTGATTTTCTG
ATTCTTTCAAATACAGCAGTAAAACTCCTGGCTCGTCGAAGATCTAAGGT
TAACAGTCCATCTAATTTCTATTACGTCCATGGTTAGAGGGATACTATAG
CCGGGCGTTTATAAACTTACGTCATGTAATATGTAGCATTACTGCAATGA
aaccatttcaatattttttccctTTAGGTAAATTGTTTATCTTTTTGTac
agaatatttttgtttttcataattattaaatgataaagaattttcttttt
attagtcAGACCTGGTGACTCTCCCAATCAGttctatgatttttttctta
cataattgttcccgtttcatatcagacacatatttcatattaggacagtg
tattgttatattgtgctaaggcgaggccaatttaatttgttgttttacgg
gccaagctacccaaaaagagggtcggt

Coding sequence (CDS) from alignment at scaffold_69:93310..106686+

>TCONS_00072032 ID=TCONS_00072032|Name=TCONS_00072032|organism=Clytia hemisphaerica|type=CDS|length=2334bp|location=Sequence derived from alignment at scaffold_69:93310..106686+ (Clytia hemisphaerica)
ATGGTACTTGAATTCCACCGAACAGAGCTTCAAACTGGAAAGGAAATGGC
AAGCAAAAGTGATAGCTaCCAGACATTTGGGAGTTTCAGCTTGGTCAATG
GAGTGATGGTCAAGATCAGTGATAAATATCTTGCACCGCCAAAGATAACA
TTACCTGAGCACTTCAGAGAGATTGACCCTACTGAACTTCTACAGCTACA
GTATGATTTTACGAAAGAAAAGAATGCCATTTTACAAGCGGAAGATGAAC
GCGCCAATCAGTTAAGAATTCAGCAACAAAAGGAACTTGATGCCaagAAG
AAACAAGAAGAAGAGGAAAGGCAGGAgcgagaaaaagaagaaaaagaacg
tCTTCTTCTTCAACTACAACAGCTGGAAAAAGCAAAGGAAGAAAATCTTC
CTTCTCAAGAGAATGATAACCAAACAGCTCGGCCTGTTACTACAGTCGAA
CAACCAAGCAGTAGTTATGTTGCCGATATACCTGCTCAAACAAAAGTTTC
TCAGAGCACGTCTGCTTCTCCATTTGCCATCTTGACGCCTCTTGTGGTAT
CCAGCAATACCAGTCAACAGAACGCTGCATCTTTTTCTTACGTCAAACAT
GATAATTTCAACATGTTTGACCCGTTAGAATTCGATGCACAAAACGATAA
TCCTTTTGAATCTGTAGAGAGGGACACTTTGAATGAATTGGATGAATTAA
GGAGTGTTTTGCAACCGGAAACTCAACCTGTCATCGAAACATCACCCTTC
AAATCAGACGAGGGTCATACTTCTCACACCGAGTTTGAACTTAGCTCAGT
ATTTAACCAACCTTTACCTCAGCCAGTGACTACTGTAAACGAACTACCAA
CGGAAAATATTATCGCCATTACTGATATTGAGACTTCCACTTTTGTTTCT
CCCTCTTACCTTGTCGACCACTTCGCCTCCATTCCACATCATACTTCTAA
AGGAACGTTAAACTGGACAGGCTTTTCATCACCTCCTTCAACTCTCAATC
AAAATATGAACCCTTTTGCATCCAATAATCCCTTTCAAGCGAACTTTCAA
AGTCTTGATTCATCTCAAAATGATACACCGAGTCAGATGTCGTCCAAAAC
ACCACCGCCAAGTTTACACTACGTTGATGGAGTACGAGCAAACATTGAAA
ATACGAACCTTGAAAATCAAGGGATGACGAATTTACAACGAGCGAAGTCT
TTACCGAACCTCGATCAAGCGAATCAGCCAGGTCCTACTTTTGAATCTCC
ATCACCTTATACAATGGAAATGGAAAATGCACCGGTGGCCACAGATCGAA
TAGAGAATATCATGAAACAGTTCAACTTTCAACGGATGCCACAAACCTCA
TCTCCCAATAGTCAAGTACCAAAAGAAAACTCTATTGTAAACGATACTAC
TTCTAATACTTTCTACAGCACTAATTTATCAACAGACAGTGCAGTACAAC
AAAACTTATTTCCAACGTCCTACAATCAAGCGATTGCGATGCCAACCTCG
TCGGCAAATAGTTTAATTTCTCAACCGGCAAATACGCAACAAGACTACAT
GAACTACCAACATCAGGTGTCTTTGGGAAGCGTTCAAACAAACCATCAAA
TGACACCAGATGCTACAGACTATAACGCGGGAGGACCTTTAATGGTACAT
TCCAGAATACCACTCCATAATAGTGGAACAAATTTAAATGCAAATACTGT
TACGTCAGACTCTATAATAAACTTATCGTCGAATACTGGAAACCCCATTC
CTTCATCATATTCAGGACATCCACCATCAACTAATGTAGGCGCAGTTAAT
CGTGTTTATGCCGTTCCTACCTTTGGGAATGCTATTAGCAACTCACCAAC
AAATTATTCCCATATACCAGCCAAcaataatttacaaaaaaatcttcCTT
ACAAGAACGGCGAGGTAAATTCCTCTCAGCCTGTTATTCCTAAACCTCCA
CAAATGACTTTACCAAAACAAGGCGTACTACCTGACTTGACTGGATCTTT
ATCGACAAGTGAACGAAACTTTGCTGATCAATTGAGCTCAATGGGCTTTG
ATGGTCCTTGTGTTTCAAGAACTATCAAACGATTGGGAATGGACGAAAAA
GAGgttttggattttttggTTCTTGTAGAAGAAGTGAAAGATCAGTCCAA
ATGCAACGGAGAAGACGTGGAAATCGCTCTCCTTAATaatcaaaatgata
aaactAAGGTCAAAACGTATCTAGAGATGGTTGCGACTTTCAAAGAACTC
GGTTTTCAAACACTCAAAATTCACGAAGCGTTGAAAATGAACGATTGTGA
TCAACACAAATCATTGGACCATCTGACGAGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044729XLOC_044729Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072032-exon-scaffold_69-1491911889:93310..93885TCONS_00072032-exon-scaffold_69-1491911889:93310..93885Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:93310..93885TCONS_00072032-exon-scaffold_69-1510915933:93310..93885Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:93310..93885TCONS_00072032-exon-scaffold_69-1575043694:93310..93885Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1491911889:100928..101004TCONS_00072032-exon-scaffold_69-1491911889:100928..101004Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:100928..101004TCONS_00072032-exon-scaffold_69-1510915933:100928..101004Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:100928..101004TCONS_00072032-exon-scaffold_69-1575043694:100928..101004Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1491911889:101247..101303TCONS_00072032-exon-scaffold_69-1491911889:101247..101303Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:101247..101303TCONS_00072032-exon-scaffold_69-1510915933:101247..101303Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:101247..101303TCONS_00072032-exon-scaffold_69-1575043694:101247..101303Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1491911889:101585..101680TCONS_00072032-exon-scaffold_69-1491911889:101585..101680Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:101585..101680TCONS_00072032-exon-scaffold_69-1510915933:101585..101680Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:101585..101680TCONS_00072032-exon-scaffold_69-1575043694:101585..101680Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1491911889:102291..103898TCONS_00072032-exon-scaffold_69-1491911889:102291..103898Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:102291..103898TCONS_00072032-exon-scaffold_69-1510915933:102291..103898Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:102291..103898TCONS_00072032-exon-scaffold_69-1575043694:102291..103898Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1491911889:104223..104420TCONS_00072032-exon-scaffold_69-1491911889:104223..104420Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:104223..104420TCONS_00072032-exon-scaffold_69-1510915933:104223..104420Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:104223..104420TCONS_00072032-exon-scaffold_69-1575043694:104223..104420Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1491911889:104725..104829TCONS_00072032-exon-scaffold_69-1491911889:104725..104829Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:104725..104829TCONS_00072032-exon-scaffold_69-1510915933:104725..104829Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:104725..104829TCONS_00072032-exon-scaffold_69-1575043694:104725..104829Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1491911889:105199..106686TCONS_00072032-exon-scaffold_69-1491911889:105199..106686Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1510915933:105199..106686TCONS_00072032-exon-scaffold_69-1510915933:105199..106686Clytia hemisphaericaexon
TCONS_00072032-exon-scaffold_69-1575043694:105199..106686TCONS_00072032-exon-scaffold_69-1575043694:105199..106686Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072032-proteinTCONS_00072032-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_69supercontigscaffold_69:93310..106686 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.9572	16.9517	3.68918	1.71843	22.2454	17.0992	15.4513	16.1998	8.68022	12.851	14.9032	8.90053	11.4284	12.912	9.07719	10.7521	9.04514	10.3543	10.0405	12.4218	10.8471	11.7012	17.3566	17.627	15.7819	16.1225	11.4933	10.5767	20.2691	19.9734
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR023340UMA
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072032 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top