TCONS_00072148 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072148
Unique NameTCONS_00072148
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2600

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072148 ID=TCONS_00072148|Name=TCONS_00072148|organism=Clytia hemisphaerica|type=transcript|length=2600bp
GTGATTTGTCTTGATTTACATTTGCATTTTTAAAGCGCAGTATCTTTTCA
ATAACATGTGTTTTTAGTTTCAGCCAAAAATAATAATACAAGAAGGGGCT
GGTTTTTTCTTTAATCAATGCTTGCCATGAGATGAACCTCCAGCTTTGGC
ATGTGTCGGTGTGTTTTGTGtttattcttcaaaattttacaacaatCTCA
ATGACAATCACAAGCAATTCGGATAAGTCGAAAAGAGAGAAAATTGTACG
CATAACCATTGAACATGTTGACGTGCCAAACACACAACAATCCATAGCAG
ATATTAAAAGAGCGCCAGCTTtgcaaaaacaaattttgcttttgaaagaa
aaagaaagtgtcAGGAAACAAGATgagcaaaagaaaaagattgaaagtaa
aatcctgTCCAGATTGAGCAATCTGTTGGCTAAAGTGAAGGATATTAAAC
AAAGACATTTTCATCACCATGGAGATAGCGAAGTTGATGACAAAgaagGA
CAAGAAGTGATACCATCAGCAGCCAAAGTGGTCCACCACCACCCACACCA
CAAATCACACCACCATAAGCACCAATCGCCAGTAGCCACTCGTAAAACGT
ACCATCATGGAGAAAGACCGGCCTTACATTTACCCAATGAAGGAATGGAT
AGCGGTGACAATGTAGATATAAATATTACCGAAACTTCTGGAATAGCAGA
TGAGAACTCCTTAAGAaccattgaaaatgaagaacagTACGGAGACCAGC
TAAATCGCTTTCAAAATGGAATCAAAGAATCTACAACAAGCAAAAATATT
GGCAATTTGCCAGCAACGAATTTAACGAAAAGCACATCAAGTGATATTTT
GTATACCATAAATAAGGGTAACAAAAGTGTTTCTGATGGTTCGAAATCCA
AACAGAGCAATGATGAAAATAGTTATAAAATCCTTGTCAAAGACTATGAA
TTATCCAGTGGGAATGATGATTCAGATGAGGACGAAGATATAACGTTTAA
AAAACCAACAATGGATCAGAAATTGGTCGGGAAAAATTTAACACACTCTA
CAAGTGATAGCCAATTTTTTGCAAATACAAGTGCTAGCATTGGTAAAACA
AATGTAAACGTTACTTCGCAAGAGGATTTTGAAGTTGTTAATAGCAACGA
GCTAAGTCAGCAAAAACAATATGATACACAGTCCGCAGATGTATCAAGGA
TACAACGACCTGACGATTCCGAACAAATTTCTAAACACCAAGGAGATAGT
CATGAAATTGGTTTTAAGATCCCAGAAAGTAAGATCGATTTTGTGATTCA
ACCAAAACCTGATTTACATTCAGGAGATAAAGGCAATACTTTTGATCCAA
CTACAAGACATTTAGGAGATAATAATGATAAAATCAACGTACAGATAGCT
AGTACAAGATATATGGGAGATAAAAACGACTGGGGAAATGGTACACCGAT
GATATCCTCAGAAGATATACATTACTGGGATAAAGAGAAGAAAACGAAAG
CTAATATCAATAACGTCAACcataaaatgaaagatttttcatCGAATTTC
TTTACTGCTACGATGAGACACGATCAGGAAGATAAAGCAAATGACGAAGA
CGATTTTGAGGAAAAAGTTGATAACAAAAATAGAACTAGTTTGGAACATG
ATACTGAAGATGCATCTTCTGAAAAGAAGAATAGTACTGTTGTCTCTCTT
GAAGAAAATAATTCCAATGAAAAGTTCAGTAACAATAGTATGCTTAATCT
AAATCGAAAGACGAATTCTACCATGATTGAGAAGGGTAGCAATGTACAGa
atttacaaaacaataaaacCTTGGATCTTGAGGAtaacaaaaaactgaaa
aatgaagaagaaaattttactaaCATTTCCAAAAACAATACATTGTTGCA
ATCAGAGACTTTGAGTAATGCAACTTTTGGTGATTCTGGAGTAGTAAGAG
ATTCCTCAATGATAAATAGTTCAAGAAATGTCGAGTCTGCTAACCGTTCT
AACCTTTCATCGAATGAATCGTTAAGTAAGGATATCTTTGATGGAAATAT
TGAAAGAGAAAGCAAACAAAAACAGGACCAGATACAACTTGTAGTTGAAA
GTGAGCCTGGAAGTGCCAGTAAAATTCctcaaaatgtaaacattggACCT
CATTCTGGTCTGCAAATTGCGAAAATAAACATTACAAAGATTAAAGAAAT
GGATAAATTACAGAAGAATATAACAGCtgagtttttaaataagaactcTG
CATCTTTGACTCAATCAAACAATACTCAACAAGActttaaaaaacgttta
aaatctaGACTTCAATTAATGAGCGAGAAAAGACAATTGTTTAATCGAAC
AGCAAAGATGGCAGATGAAAACGCGAGGCTTATCGTGGTCACTCCTACTA
AGTTGAACGAGAATGCACACTCGAGAGAAATTGATGAATTTTGTTCCATG
AAAGTCACTGCATCGTATGCCGACCCTAACGATTGTTCAAAGTATTGGTT
ATGTGCGGGTGGAAAAAAGTACGAAACACACTGTCCAGGTGACTTAGTGT
ACAACAATGTTATTTCATCATGTGATGATCCAAAGAGTTCAAAAAACCAG
Run BLAST on NCBI

protein sequence of TCONS_00072148-protein

>TCONS_00072148-protein ID=TCONS_00072148-protein|Name=TCONS_00072148-protein|organism=Clytia hemisphaerica|type=polypeptide|length=823bp
MNLQLWHVSVCFVFILQNFTTISMTITSNSDKSKREKIVRITIEHVDVPN
TQQSIADIKRAPALQKQILLLKEKESVRKQDEQKKKIESKILSRLSNLLA
KVKDIKQRHFHHHGDSEVDDKEGQEVIPSAAKVVHHHPHHKSHHHKHQSP
VATRKTYHHGERPALHLPNEGMDSGDNVDINITETSGIADENSLRTIENE
EQYGDQLNRFQNGIKESTTSKNIGNLPATNLTKSTSSDILYTINKGNKSV
SDGSKSKQSNDENSYKILVKDYELSSGNDDSDEDEDITFKKPTMDQKLVG
KNLTHSTSDSQFFANTSASIGKTNVNVTSQEDFEVVNSNELSQQKQYDTQ
SADVSRIQRPDDSEQISKHQGDSHEIGFKIPESKIDFVIQPKPDLHSGDK
GNTFDPTTRHLGDNNDKINVQIASTRYMGDKNDWGNGTPMISSEDIHYWD
KEKKTKANINNVNHKMKDFSSNFFTATMRHDQEDKANDEDDFEEKVDNKN
RTSLEHDTEDASSEKKNSTVVSLEENNSNEKFSNNSMLNLNRKTNSTMIE
KGSNVQNLQNNKTLDLEDNKKLKNEEENFTNISKNNTLLQSETLSNATFG
DSGVVRDSSMINSSRNVESANRSNLSSNESLSKDIFDGNIERESKQKQDQ
IQLVVESEPGSASKIPQNVNIGPHSGLQIAKINITKIKEMDKLQKNITAE
FLNKNSASLTQSNNTQQDFKKRLKSRLQLMSEKRQLFNRTAKMADENARL
IVVTPTKLNENAHSREIDEFCSMKVTASYADPNDCSKYWLCAGGKKYETH
CPGDLVYNNVISSCDDPKSSKNQ
Run BLAST on NCBI

transcript from alignment at scaffold_71:234352..240244-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072148 ID=TCONS_00072148|Name=TCONS_00072148|organism=Clytia hemisphaerica|type=transcript|length=5893bp|location=Sequence derived from alignment at scaffold_71:234352..240244- (Clytia hemisphaerica)
GTGATTTGTCTTGATTTACATTTGCATTTTTAAAGCGCAGTATCTTTTCA ATAACATGTGTTTTTAGTTTCAGCCAAAAATAATAATACAAGAAGGGGCT GGTTTTTTCTTTAATCAATGCTTGCCATGAGATGAACCTCCAGCTTTGGC ATGTGTCGGTGTGTTTTGTGTTTATTCTTCAAAATTTTACAACAATCTCA ATGGTAAGAAAGACCGTCTACACGCTTTTTTTATCATCATAAGAATATAC ACTTTATAAGAATGGCCATGATAAAAATGGCCAAAAATTAAGAATATGCT AAGAATATCACCATCATGGAATTTTGCTACCTACTCAAGTAGCTAAGCCA TTTTTAGATCACTTTCAATTATAAATTGTCAATTACCCCCAAGTAAGGCT CACTCCTTTCACAAAAATGCCATTTTATGCTTGAACGGCTCAATGTACTA AATGTTAAATCTAGTATGAATTAGGATCCTAACCTAATAATGCTGTAAGA ATATTTTAGGATGCTTTTCCCAAAAAAGTTAAGAATATCCATGATGAAAT GGATTTACACCATTCTTATAAAAAAAGGTGTGTATCTCTATAATTATATC CATGACCACGGGACTTCTTTTAGGGGCCGTCTTCATAGTACGTACGCACT AAAATGTCGAAAATCGGATGCCCCCTCCCCCTTGTACGCAAGCGTACGCA AATGGCTATACCCCCTGGTAAGTACGTACTTTTCATCCACACCCCCTCCC TCGGTTGAAGAAAATTTCGAATTCAAATCGTTTGGTTTGGAGCTTTATTT CATACATGAAACTCAATGTTTATTAAGAAACTTTTTCTTTTCCTTGATAC GTGTAAGAAGCGTAAAAATCGACAAAAAAAACAAGCAAAAAAGGGCTATG AAAATTTTTCTCTGCGTACGTACATTTTCTTTTGACTCCTCCCCTACCCC TCCCCCCGTACGCAAGCATACGCTTTTGAAAAGACTCCCCCTCTTAGTGC GTACGGCCCCTTATAAGAAAGGCGTTCTTTTTATTTTTTCAAGGATGCTC TTGACTTAGGGGAAATCATCCTAAAATATTCTTAGGTTAAGATCCAAATT CTACCTAAAATTGGCATGTATTGTAAATTGACATATATTTGGAGAAAAAA AAGTTCCCTTAACCTTTAAGGGTTTTATATGGACACGAAACCTTCCAAAA ATATTGCAAGCTTCTTGCAATTTCCTAATTTTTTTTGGCAAAAATCCTGG TTCCAAAATTTCCGCGAGCATTAAATTTCGCGAAATTTCGGAAAAAAGAA TCCGCTCGGAGAATTTCGCCACCTAGGAAGTAATTAGTCATAATCTGGTG ATTATTGCTTTCACTCTAGACAATCACAAGCAATTCGGATAAGTCGAAAA GAGAGAAAATTGTACGCATAACCATTGAACATGTTGACGTGCCAAACACA CAACAATCCATAGCAGATATTAAAAGAGCGCCAGCTTTGCAAAAACAAAT TTTGCTTTTGAAAGAAAAAGAAAGTGTCAGGAAACAAGATGAGCAAAAGA AAAAGATTGAAAGTAAAATCCTGTCCAGATTGAGCAATCTGTTGGCTAAA GTGAAGGATATTAAACAAAGACATTTTCATCACCATGGAGATAGCGAAGT TGATGACAAAGAAGGTTTGTTTTTTTCATTTTCATTTTGAGCTGTTATTA TTCAGGCCAGGGGTCTGTAAATTTGTTTTTTTTGGATGACAGTTTGCCTC TGGGTTATTGAATACACCCCTGTGTTAAAGACCCGGTGGAGCGGCCAAAC CAAAATTTCTTCCAAGGAGGGGAAAAGTACCCTATAATTTCAGCCACACT TGTTTAAAAAGTTCAATGAAAAAAAAAACGGTCCGAAACGATCCCAACTA GATAACAATAGAATTTTTATCCGCATTGCGGAATTTCAAAAAAAATCATC CGCACACTGAGAAGAAGTTACACTGGGTCTGTGAGACAGTGATATTTTAA TAACAATTTTCTATGATCAGCTTTTTTGTTATAAATTCAGGACAAGAAGT GATACCATCAGCAGCCAAAGTGGTCCACCACCACCCACACCACAAATCAC ACCACCATAAGCACCAATCGCCAGTAGCCACTCGTAAAACGTACCATCAT GGAGAAAGACCGGCCTTACATTTACCCAATGAAGGAATGGATAGCGGTGA CAATGTAGATATAAATATTACCGAAACTTCTGGAATAGCAGATGAGAACT CCTTAAGAACCATTGAAAATGAAGAACAGTACGGAGACCAGCTAAATCGC TTTCAAAATGGAATCAAAGAATCTACAACAAGCAAAAATATTGGCAATTT GCCAGCAACGAATTTAACGAAAAGCACATCAAGTGATATTTTGTATACCA TAAATAAGGGTAACAAAAGTGTTTCTGATGGTTCGAAATCCAAACAGAGC AATGATGAAAATAGTTATAAAATCCTTGTCAAAGACTATGAATTATCCAG TGGGAATGATGATTCAGATGAGGACGAAGATATAACGTTTAAAAAACCAA CAATGGATCAGAAATTGGTCGGGAAAAATTTAACACACTCTACAAGTGAT AGCCAATTTTTTGCAAATACAAGTGCTAGCATTGGTAAAACAAATGTAAA CGTTACTTCGCAAGAGGATTTTGAAGTTGTTAATAGCAACGAGCTAAGTC AGCAAAAACAATATGATACACAGTCCGCAGATGTATCAAGGATACAACGA CCTGACGATTCCGAACAAATTTCTAAACACCAAGGAGATAGTCATGAAAT TGGTTTTAAGATCCCAGAAAGTAAGATCGATTTTGTGATTCAACCAAAAC CTGATTTACATTCAGGAGATAAAGGCAATACTTTTGATCCAACTACAAGA CATTTAGGAGATAATAATGATAAAATCAACGTACAGATAGCTAGTACAAG ATATATGGGAGATAAAAACGACTGGGGAAATGGTACACCGATGATATCCT CAGAAGATATACATTACTGGGATAAAGAGAAGAAAACGAAAGCTAATATC AATAACGTCAACCATAAAATGAAAGATTTTTCATCGAATTTCTTTACTGC TACGATGAGACACGATCAGGAAGATAAAGCAAATGACGAAGACGATTTTG AGGAAAAAGTTGATAACAAAAATAGAACTAGTTTGGAACATGATACTGAA GATGCATCTTCTGAAAAGAAGAATAGTACTGTTGTCTCTCTTGAAGAAAA TAATTCCAATGAAAAGTTCAGTAACAATAGTATGCTTAATCTAAATCGAA AGACGAATTCTACCATGATTGAGAAGGGTAGCAATGTACAGAATTTACAA AACAATAAAACCTTGGATCTTGAGGATAACAAAAAACTGAAAAATGAAGA AGAAAATTTTACTAACATTTCCAAAAACAATACATTGTTGCAATCAGAGA CTTTGAGTAATGCAACTTTTGGTGATTCTGGAGTAGTAAGAGATTCCTCA ATGATAAATAGTTCAAGAAATGTCGAGTCTGCTAACCGTTCTAACCTTTC ATCGAATGAATCGTTAAGTAAGGATATCTTTGATGGAAATATTGAAAGAG AAAGCAAACAAAAACAGGACCAGATACAACTTGTAGTTGAAAGTGAGCCT GGAAGTGCCAGTAAAATTCCTCAAAATGTAAACATTGGACCTCATTCTGG TCTGCAAATTGCGAAAATAAACATTACAAAGATTAAAGAAATGGATAAAT TACAGAAGAATATAACAGCTGAGTTTTTAAATAAGAACTCTGCATCTTTG ACTCAATCAAACAATACTCAACAAGACTTTAAAAAACGTTTAAAATCTAG ACTTCAATTAATGAGCGAGAAAAGACAATTGTTTAATCGAACAGCAAAGA TGGCAGATGAAAACGCGAGGCTTATCGTGGTCACTCCTACTAAGTTGAAC GAGAATGCACACTCGAGAGAAATTGATGGTAAGAATATTTTCTGAAGGAC ATTTCATAAATATTACATCGAAAAAGACAGGCTTATCCGCTTGACGTTCG AGGCTAATAAATGTCTACCTACAATTCTACTACCGGGTGCACCAAAAAAA AGTATACAGGTTTGTCGAGATATTGGGCTCTTCCAGAAAAAATCCGTTTA TGGGGGGTGGAGGATATATTATTTTTTTCATGAATTACCCCTGGACGTTT TGATTTTTAGCCCCCTGGACACGGGTTATACCCCTGGACAAACATCAAAT CAACCCCGTGGACACAAAAAATTACCCCTGGACATTGGAATTTACCCCCT GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTTACCCCCTG AACATTGCAATTTTTTGGTATTTTTTCAATACCCCTGGACAATTCATCCT CCACCCCCCATGAACGGATTTTTTCTGGAAGAGCCCATTGTGAGCTTCAG GATTTATATTTTTTGTTCATTCTTTTTTTATTGCATAGAGGATGCTCTGA CTTGAATTTTGAGCTATTATACATTAAATTTGAAAAAGTAGTTCGAAAAT TATTTCCAAAAAACTGACTTTTTTTCCATGTCGAAATTTCCAAAAATCAT TAAAAACAGCAATCACGCTATAAATAAGACAAAATGACAAAAACACAATT TCATTGTCTTTTTGATTCTTTTTTCTCCTATCTTATATTTTGCCAACGGT TTGTCCATCTTATTTACACGTCTTCAATATTTCCAACACCAGCAAACTCA ATGCAGACCCAAGTTCTTTGAGCAAACTAGTTGAGGAATGGTGATTTATT TTTTCAAAAATTTTCTCACGTAGCACACCACACCTCTCTTGGAGATTTCC AAAAAACTTTTTCAGATTTACCAAAAATATTTTTCCACATGGGAATAGCT TGTTTTACCATATTCTTAAATTTCGTAACGAGTCTTGATGAACACAGTTG CATTTTTTGGTATTTTTATGTGTAAAGAAGGTAAGTGCCAAGAGAAAAGT TTGCTCGCTGTTTTAGATGATTTTTTGAAATTTCGACATTAAAAAAAAGT CAGTTTTTTTGAAATAATTTTCGAATTACTTTTTCAAACCTAATGTATCA TAGCTCAAAATTCAAGTTAGAGCATCCTCTATGCGATAAAAAAAGAATGA ACAAAAAATTTAAATCCTGAAGCTCACAATATCTCGACAAAGTTGTATAC TTTTTTTTTGGTGCACCCGGTAGATAAAGTTAAAAAAACTATAGGAGTGG TTTTTTATATTTCTCCTTCATTTTTCTCTAAACCTGTTATTTTTTTATAA GGTGAAAAAACTGCAGAGTGAACTTTGTTATCAATCCATACAGCTACAAT AACGAACTATATAAGAACATAAGGGTTCGATGGCCAAAATGTTAAGAACA AGTTAAGAACATTTTAAGGCTTTGTGGCTAATTTCTAAAGAAAATGGACA AAATTGCTCAAAAAATGGTGAAAATAAAAAGAACATATTTTTAGGCTTAA AACTCAAAAAGTTAAGAACATTTGAAGGCTTCAAAATTTTTGGATGTTCT TATAAAAAAAAACTTGTATATACATGCTATTTTTCTTTTGAGTCATCAAA ATTATACATATTTTATTTCTCTACCATAGAATTTTGTTCCATGAAAGTCA CTGCATCGTATGCCGACCCTAACGATTGTTCAAAGTATTGGTTATGTGCG GGTGGAAAAAAGTACGAAACACACTGTCCAGGTGACTTAGTGTACAACAA TGTTATTTCATCATGTGATGATCCAAAGAGTTCAAAAAACCAG

Coding sequence (CDS) from alignment at scaffold_71:234352..240244-

>TCONS_00072148 ID=TCONS_00072148|Name=TCONS_00072148|organism=Clytia hemisphaerica|type=CDS|length=2469bp|location=Sequence derived from alignment at scaffold_71:234352..240244- (Clytia hemisphaerica)
ATGAACCTCCAGCTTTGGCATGTGTCGGTGTGTTTTGTGTTTATTCTTCA
AAATTTTACAACAATCTCAATGACAATCACAAGCAATTCGGATAAGTCGA
AAAGAGAGAAAATTGTACGCATAACCATTGAACATGTTGACGTGCCAAAC
ACACAACAATCCATAGCAGATATTAAAAGAGCGCCAGCTTTGCAAAAACA
AATTTTGCTTTTGAAAGAAAAAGAAAGTGTCAGGAAACAAGATGAGCAAA
AGAAAAAGATTGAAAGTAAAATCCTGTCCAGATTGAGCAATCTGTTGGCT
AAAGTGAAGGATATTAAACAAAGACATTTTCATCACCATGGAGATAGCGA
AGTTGATGACAAAGAAGGACAAGAAGTGATACCATCAGCAGCCAAAGTGG
TCCACCACCACCCACACCACAAATCACACCACCATAAGCACCAATCGCCA
GTAGCCACTCGTAAAACGTACCATCATGGAGAAAGACCGGCCTTACATTT
ACCCAATGAAGGAATGGATAGCGGTGACAATGTAGATATAAATATTACCG
AAACTTCTGGAATAGCAGATGAGAACTCCTTAAGAACCATTGAAAATGAA
GAACAGTACGGAGACCAGCTAAATCGCTTTCAAAATGGAATCAAAGAATC
TACAACAAGCAAAAATATTGGCAATTTGCCAGCAACGAATTTAACGAAAA
GCACATCAAGTGATATTTTGTATACCATAAATAAGGGTAACAAAAGTGTT
TCTGATGGTTCGAAATCCAAACAGAGCAATGATGAAAATAGTTATAAAAT
CCTTGTCAAAGACTATGAATTATCCAGTGGGAATGATGATTCAGATGAGG
ACGAAGATATAACGTTTAAAAAACCAACAATGGATCAGAAATTGGTCGGG
AAAAATTTAACACACTCTACAAGTGATAGCCAATTTTTTGCAAATACAAG
TGCTAGCATTGGTAAAACAAATGTAAACGTTACTTCGCAAGAGGATTTTG
AAGTTGTTAATAGCAACGAGCTAAGTCAGCAAAAACAATATGATACACAG
TCCGCAGATGTATCAAGGATACAACGACCTGACGATTCCGAACAAATTTC
TAAACACCAAGGAGATAGTCATGAAATTGGTTTTAAGATCCCAGAAAGTA
AGATCGATTTTGTGATTCAACCAAAACCTGATTTACATTCAGGAGATAAA
GGCAATACTTTTGATCCAACTACAAGACATTTAGGAGATAATAATGATAA
AATCAACGTACAGATAGCTAGTACAAGATATATGGGAGATAAAAACGACT
GGGGAAATGGTACACCGATGATATCCTCAGAAGATATACATTACTGGGAT
AAAGAGAAGAAAACGAAAGCTAATATCAATAACGTCAACCATAAAATGAA
AGATTTTTCATCGAATTTCTTTACTGCTACGATGAGACACGATCAGGAAG
ATAAAGCAAATGACGAAGACGATTTTGAGGAAAAAGTTGATAACAAAAAT
AGAACTAGTTTGGAACATGATACTGAAGATGCATCTTCTGAAAAGAAGAA
TAGTACTGTTGTCTCTCTTGAAGAAAATAATTCCAATGAAAAGTTCAGTA
ACAATAGTATGCTTAATCTAAATCGAAAGACGAATTCTACCATGATTGAG
AAGGGTAGCAATGTACAGAATTTACAAAACAATAAAACCTTGGATCTTGA
GGATAACAAAAAACTGAAAAATGAAGAAGAAAATTTTACTAACATTTCCA
AAAACAATACATTGTTGCAATCAGAGACTTTGAGTAATGCAACTTTTGGT
GATTCTGGAGTAGTAAGAGATTCCTCAATGATAAATAGTTCAAGAAATGT
CGAGTCTGCTAACCGTTCTAACCTTTCATCGAATGAATCGTTAAGTAAGG
ATATCTTTGATGGAAATATTGAAAGAGAAAGCAAACAAAAACAGGACCAG
ATACAACTTGTAGTTGAAAGTGAGCCTGGAAGTGCCAGTAAAATTCCTCA
AAATGTAAACATTGGACCTCATTCTGGTCTGCAAATTGCGAAAATAAACA
TTACAAAGATTAAAGAAATGGATAAATTACAGAAGAATATAACAGCTGAG
TTTTTAAATAAGAACTCTGCATCTTTGACTCAATCAAACAATACTCAACA
AGACTTTAAAAAACGTTTAAAATCTAGACTTCAATTAATGAGCGAGAAAA
GACAATTGTTTAATCGAACAGCAAAGATGGCAGATGAAAACGCGAGGCTT
ATCGTGGTCACTCCTACTAAGTTGAACGAGAATGCACACTCGAGAGAAAT
TGATGAATTTTGTTCCATGAAAGTCACTGCATCGTATGCCGACCCTAACG
ATTGTTCAAAGTATTGGTTATGTGCGGGTGGAAAAAAGTACGAAACACAC
TGTCCAGGTGACTTAGTGTACAACAATGTTATTTCATCATGTGATGATCC
AAAGAGTTCAAAAAACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044808XLOC_044808Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072148-exon-scaffold_71-1575043694:240042..240244TCONS_00072148-exon-scaffold_71-1575043694:240042..240244Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1575043694:238581..238875TCONS_00072148-exon-scaffold_71-1575043694:238581..238875Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1575043694:236267..238204TCONS_00072148-exon-scaffold_71-1575043694:236267..238204Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1575043694:234352..234515TCONS_00072148-exon-scaffold_71-1575043694:234352..234515Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1510915933:240042..240244TCONS_00072148-exon-scaffold_71-1510915933:240042..240244Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1510915933:238581..238875TCONS_00072148-exon-scaffold_71-1510915933:238581..238875Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1510915933:236267..238204TCONS_00072148-exon-scaffold_71-1510915933:236267..238204Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1510915933:234352..234515TCONS_00072148-exon-scaffold_71-1510915933:234352..234515Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1491911889:240042..240244TCONS_00072148-exon-scaffold_71-1491911889:240042..240244Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1491911889:238581..238875TCONS_00072148-exon-scaffold_71-1491911889:238581..238875Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1491911889:236267..238204TCONS_00072148-exon-scaffold_71-1491911889:236267..238204Clytia hemisphaericaexon
TCONS_00072148-exon-scaffold_71-1491911889:234352..234515TCONS_00072148-exon-scaffold_71-1491911889:234352..234515Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072148-proteinTCONS_00072148-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:234352..240244 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.103866 0.0578777 0.134403 0.328731 0.420208 0.252994 2.89965 2.89321 0.850253 0.665979 1.71375 1.50207 3.07891 2.64407 2.02213 5.2895 2.70674 2.77432 0.0473195 0.0660219 1.42028 1.42751 1.22494 1.02084 1.60903 3.36966 0.488301 0.195423 0 0.0167794
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072148 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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