TCONS_00072228 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00072228
Unique Name	TCONS_00072228
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2722

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_71:1336074..1352473-
coding sequence from alignment at scaffold_71:1336074..1352473-

transcript sequence

>TCONS_00072228 ID=TCONS_00072228|Name=TCONS_00072228|organism=Clytia hemisphaerica|type=transcript|length=2722bp
TTTCGGGAAAAACGGGGAAAATTAAAAGGACGCGCATCTCAATCTATCCC
ACAATACTTTTCTCGCATGATGTAATCTCCCCTCATGTGCGTCGCCTTCG
ATTCAAACGTGCTGAAACTTTGTGGAATTCATCAAAAACTGTGGAAAAAA
GGTTAGGGAAAATGCCAAGCGCCTCATCAAAACCCCAAGCATCTCAACAA
CAGGTTGCCACTGTGGATATTCTCCAGGAACCTATCAAGTCTGCCCTTTC
TGTTGCTGATAAGAAGCTTAGAAACTTGGAAAAGCGAAGaCTCAAACTTT
tggaaacaaagaaaaaagctGACAAAGGAGAGGAATTGAATGATGATCAG
AAgATTGCCCTCAAAAACTTAGAAGCTGTTGACTTTGGTTTGGAAGCTGT
CAAAGATGTTCGGAAACTGATTTCAGCCTTGGAAGGAGAGTACGCTAAGC
TTATTAAGAAAGACCAGAAAAGGCAAAAACAAGAGCAAAAGGATGCTTTG
GAAAATCGTAGCCAAAAGTATGTTTTTGATGTTGTTGACGCACAAGCTAT
TCTTGGAGAAATGACTGAAGATGTTCGACCTGATTTTCTTGCCGGAGCTA
ATGGTGCTTGTTTACTAACTGAGACTGAACTCGAAAACTTAGATGGGATT
TATGAACTTATTAACCCTGCATCCAGTGAAGAGAAAAGCAAGAAGCTTTC
CGAACGATCTAGAACTGCTGGTCAGCATCTTGTATCTTTAGTTGAAGGCA
AAAACTCAGCTGCTGTTGAAGAAGTAACTTACAAGGACAttaacaatatt
ttacaaaagattAAAACATGTGGATATTTTGACAAAGAGTCTTCTGAATC
CCCTGCAGCTGTTGAAGAGACAGAAGCATTGAGTGAAGAACAGAAGCCAG
TTGAAGCTGAAGTGGTTGCAGAGCCTGAACCAGAAACTCCAGTTGCCGAA
GAATCTCCAGTTCAAGAGGTAGTTGAAACTGCACCAGTTGAAGTTGAACC
AGTAAATGGTGTTGATCTTCCACCAGAAGTCCAAACTACTCCTGAAGAGG
AAGGAATCAAGTTCATGGGAGAATCAGAAATATCTGCAGCTGTTCAAGAA
GCTCCATTGAACCCTGTATCTCCCGAGTTTGTTCCAAGAAAAATGCAAAA
CCCAGCTGAAGATGGTTTTGAAGGTGGTGAAACAAACAATTCTGATTGGC
AACAAATTGAGAGCGGCCACAGCAACCATCAAGGAGGAAACTACAGAGGT
CGTGGACGTGGTCGAGGTCGGGGTGGCGGCTTCCGAGGTCGTGGAGGAAA
CAGAGATGGATCTGGTAACTACCGTGGTGGAAACAGGgaaTACCGAGGTG
ATTACCGAGGCGCTCGTGGTGGTAATCGTGGAGGAAGCGGAAACTACCGT
GGAAACCGGGAAGGCGGACGTGGAAATTTCCGTGGTGGAAATCGTGAGGG
TGGTCGTGGAAATTATCGTGGTGATCGTGGTGGCCATGGTGGAAACCAAC
AGCAGCAGCAACAACAATAATTTCCTCAAACCTTTTCTTTGTTGAATTTA
ATTTAACGATGCGAATGAAAGAATAAATAACTGGAGAGTTGGTAAACGAG
TTGGGTTTGAGTTGATTCTCGCTCCTCTCGTCATGTTTGGACAATACACG
ACAAACAAACAGACAGACAGATGCAGCCAATTGTTGATTGAGCTCTTGCT
ATCGCTCTTTTGATGACAGCAATTGGCATTTTCcccacaaaacaaaacct
tttgaTGAATTTAATTTGAAACAAACACGTTGATTGACAGATTGTACCGA
TTGAAACATTACGGCATGAACAAATGATCTACATTTGCGTTTTTAACGTC
TCACGGGTCTTAAAATCAACGGataatattgattttttatattttttatt
ttttcacatgTTACATACCAATCTGCTTCTTCTTTTGGTACTTCTTAGAA
TTCTTGGGTTCCTTTTTTAGTCTTTTCTCCCAACCCAAAGAATCGTTTAT
TCAATCTATCGTACTTGGCATTTGTATTAAACTTGTGATCTTGAACTACT
TGGACCTTTTTAGTGCGAAATTCTAAATGACATTTGAACATTTTGTTACT
CGTTTAGAAAAACGATTTATGTACTGTAAGATGCCTGTTTTCTCTTTTCA
CTTTGTAAATATGACGCCTAACGTTTTTTCACTCATTCATTATGTAGTGA
CGTAACAACATATCAAATCGGTTAATcgttgaaatttgaaataattcatt
tctttctgtttatatCCCCCATACACAGTTCAAATTCACCGTCTTTTCTC
TCTAACTCGGACCCAGtctttatgattctgatagcgctcatgAGTGTgcc
aaccattgagtttcaagcccgaagggctagaggtcaatctctaacctttc
tcaagcaagaaaaatcGAAGCCTttaaatatgcgccgtatttttgatgac
ggattgaatctagcaattcatttgtttacgattgatatatttttcaaaat
taaccggtaaattttagtttcaatctgtcatttgtgtaaaaaccaggcgg
gtcgctcaaggccgcgcaactttggtaggattttttttttttttattgat
atctcttttatcaccaataGAAATGGTATATAAATATCTATGCTATGTAT
AATAAAGTAGTGTTTTTTGTATGTACagttaaaaagtaaaatatttctct
ttcGTTTTTAAACATAAGAATA

Run BLAST on NCBI

protein sequence of TCONS_00072228-protein

>TCONS_00072228-protein ID=TCONS_00072228-protein|Name=TCONS_00072228-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
SGKTGKIKRTRISIYPTILFSHDVISPHVRRLRFKRAETLWNSSKTVEKR
LGKMPSASSKPQASQQQVATVDILQEPIKSALSVADKKLRNLEKRRLKLL
ETKKKADKGEELNDDQKIALKNLEAVDFGLEAVKDVRKLISALEGEYAKL
IKKDQKRQKQEQKDALENRSQKYVFDVVDAQAILGEMTEDVRPDFLAGAN
GACLLTETELENLDGIYELINPASSEEKSKKLSERSRTAGQHLVSLVEGK
NSAAVEEVTYKDINNILQKIKTCGYFDKESSESPAAVEETEALSEEQKPV
EAEVVAEPEPETPVAEESPVQEVVETAPVEVEPVNGVDLPPEVQTTPEEE
GIKFMGESEISAAVQEAPLNPVSPEFVPRKMQNPAEDGFEGGETNNSDWQ
QIESGHSNHQGGNYRGRGRGRGRGGGFRGRGGNRDGSGNYRGGNREYRGD
YRGARGGNRGGSGNYRGNREGGRGNFRGGNREGGRGNYRGDRGGHGGNQQ
QQQQQ

Run BLAST on NCBI

transcript from alignment at scaffold_71:1336074..1352473-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00072228 ID=TCONS_00072228|Name=TCONS_00072228|organism=Clytia hemisphaerica|type=transcript|length=16400bp|location=Sequence derived from alignment at scaffold_71:1336074..1352473- (Clytia hemisphaerica)
TTTCGGGAAAAACGGGGAAAATTAAAAGGACGCGCATCTCAATCTATCCC
ACAATACTTTTCTCGCATGATGTAATCTCCCCTCATGTGCGTCGCCTTCG
ATTCAAACGTGCTGAAACTTTGTGGAATTCATCAAAAACTGTGGAAAAAA
GGTTAGGGAAAATGCCAAGCGCCTCATCAAAACCCCAAGCATCTCAACAA
CAGGTTGCCACTGTGGATATTCTCCAGGAACCTATCAAGTCTGCCCTTTC
TGTTGCTGATAAGAAGCTTAGAAACTTGGAAAAGCGAAGAGTAAGTTTTT
TTAAAATAATCTTTAATATCCATCATAATATCTTACGACAAATACTTGAC
AAGCCACTGTTCACTTACATGGTACCTTTCCCCGTTCTTTTCTCACATAT
TGATTTAAACATTTATGAGATGCTTTTATCACTGAACCCTGGCTTAACCC
AGGTAAAATTGGATATTTAAAGGTGCTGCTAGTCTGGGAAAAAACTCTAC
TGATAGCTCATTGTGGGGGCTTGAGGATCATTATCAGCTAGGGTTAAGGT
TGGAGCTCAAGAGTTATAACATAAGGCCATCATAGGGCCAATGGCCCTCT
ACTGTAAGGATAACCTGAGATCAGATTGTGATTGTTTTCTGCCCACCACG
TTGAAGCTCTAAAAAGGGATGGTTGAAAACATAACAATCTGACGAATATA
ATATCTCAAACAGTCAAAGTCTTCAAAACGCGCTTGTTTAAAAGGACTGG
GAGTGACAACAAAGTTGCGTGATTGTGTTTATGAATAGGGCGCTGTATCA
ACAAAAGAGTGTTGAATAACAGAGTTTTGGCATGCTCTGATGACGCAGGC
AGTTGGGTATTTAAGATAAAAACAACAATTATTGCTCTTTTCGGCAACCA
TTGCCGAAAGCGGCAACTTTTTTAACAATGAAATGTCGAGTTAACAGAAA
TGTGCTGTCCTTATAAGGGCAAAGATGTCAGAGCTCAATAACATGAAAAG
TTCTAAAATGAGATGTAAAAAGAAACACAGCTAGAAGGAGAAAACAGAAC
CCCTGTTGTAAGTCTGTTTACATTATGTCTCAATTTTTGTAGTCTGCATT
CTGACAGAAACCAGTTGAAAACAAAAATAAAATAAAAAATTGCTGTTTTC
GGAAAAGAGCAATAATTGCCGTTTTTATCTTTCTTAAACACCCAATGGTG
CCAACTTATGAGAATCGAAATGCGGGACAACGAGCGAGCAAAGGGAGAGA
GAAAAATTGAGCTGGGGGCTTGGAACCCAATGGGGCTGTTAGGGGGCAGA
GCGCCCTAGTAAAATTTTTTGGGCCTTAAATGACATAGGCATGGCTAAAA
CAATACAAAATTAGAAATAAAGCAAAATATTCAACCAGATAATTGTTTAT
CTTCTTCTAAAAACACTGTTGTGGAGCAATACTGTATAGCAATAGCCTCA
ATAAATATATTAGGTGTACTGGACATGATTCATCATGTAGTACTATTAAC
ATCTCTGTCCAACGCGTATCCGATGTATCGAATACGGACGCACGCAATTG
GACGGACCGTTACGAAGCGAAGAGAAAAAACGAGGAAGTGACTTTGTGCT
TGTGGAAACATATTTTTTGTAGCATTTCTATATTTTTACAAATTTCTGAG
TTCTCTCGAAAATGCGGGACATCTAAGGTATGCGGGCAGAACTCAGGACA
AGAGATGTAGGACGGTTGGCAACTAAGCAATGGCATTTGATAGTGCTCTA
GCTTGGTAATCATTGATCTTTTTGCATCTGGTGGGTTTGGATCCCATCTG
GGTCAAATCTTAACGCATTCAACAAGCACAATGAAACTAAATCGAATCTC
AATTTAACATAATTGAATATCATTCAAAACTGGAAATTGTGTTAAAATTC
AATTGTGTTCAATAGCCAAATTTTAATTGGTCAATTGTGACCCTCCAAGC
AATATCAAAGACACAAAATTTAAGCAGGCAATTATTTGGTGTCGTTTTTG
CTGGTAATCAAGCACCTAATTTTCGGAGTTCGCCGGTTTGGCGAGGTACT
TAAATATACTTGATCAATTTCCATTTACGCTTTATCATAATTATCTCCAA
GTCGGTCCAAAAAAAAACAAACGTAACTGCCAGTGAAAAACGCAAGTCTA
GAAAAAAATCGTTTTTGCGTCAATATAATTTGATGAAGAACTTCCTTCTT
TCTTAAATTTACATAAGAGTTGTACTTTAATATACTTGATCAATTTCCAT
TTACGTTACGTTTTATAATAATTATCTCCAAGTCTGTCCAAAAAACAAAC
GTAACTGCCAGTGCCAGTGAAAAATGCAAGTCTAGAAAAAAAATCATTTT
TGCATCAATAATTTGATGAAGAAACTTTCGTCTTTCTCAAATTCACATAG
GAGCTGTACTTCAATATACTTGATCAATTTCCATTTACTCTTCATCATAA
TTATCTCCATAAGTCGGCCCAAAAAAACAAAATGTAACTGCTAGTGAAAA
ACGCAAGTCTAGAAAAAAAACATTTTTGCATCAATATAATTTGATAAAGG
ACTTTGTTCCTTCTCAAATTTACATAGGAGCTGTACTTTAATATGCTTGA
TCAATTTCCATTTACTCTTCATCATAATTATCTCCATAAGTCGGCCCAAA
AAAACAAAATGTAACTACTAGTGAAAAACGCAAGTCTAGAAAAAAAACAT
TTTTGCATCAATAATTTGATGAAGAAACTTTGGTCTTTCTCAAATTCACA
TAGGAGGAGCAGTACTTTAATATACTTGAACAATTTCCATTTACGCTTTA
TCAATATTATCTCCAAGTCCAGATATATTATATACACTCCATCAAATTCC
AGTAATTGTTGGTGGTTATCCTATATTCAAGTCCAAAATGAAAAAATATG
TTTTCATGCTACAAAACAATGAGGTCTAGCAGGTAAAAAAATAACTCGCA
ACACAATTCAGGAAAAAACTTGAGCAAATAAGTTAAGATCTTCATACTTT
AAAGAAAAGAACATCCTAATAATCTAACTCCAGTGTTGTATCTTCCTTAG
TTATAAGTTTAAAAGCCACTTCAACAAAATATAATGATTGTATAAATAAA
AGCTGGCAAGAGAAAACAACGAACGAACGAAAAAGCACCGCCGTGGCAGC
CATATTGAATTGTTTTTGACAAATATCGGGAAACCAAACTCGCCAAAGTT
GCGACGGCTGGAAAAAAGGGGTTTGAAGGGTCATTGGGGCTTGAAGGGTC
ATCGGGGCTGACCAATAACAAGTGAAGTTGCATCGTGGCTTATTGCCCCT
TTAATCTAAGAACAACAGAATGACAAAAGTTCAATCAGCTTAAACTAAAC
ATTTAAAGTTTGATAAGTTCAACAACAATAATAGTTCAACAAATTTGGCA
GTGGCTCCGTTGACAAATCCAATCTTGGGTAAGACTGTCGTGAAGGCTCA
AAATAATAGCCTTTCCACTTTCAGGCTGAACAATTTTGGCGCTGGTTACT
TATCGTTTTTCAAGGATCAATCAAAACTCAGATCCTCAACTTGTTTGTGT
CAACTTATATTGTCTCAAGATTTTGTTTAATGAAATCCGACTAGTATTAC
CAAGCTAATCAAACTGTTAAGCTAAGGCTTCACTGAGCAATTTTTCATGT
GCGTGCAATGCAATAATTGTTGCCAATTACGCTGCACGCGCCTGAAAAGA
GTTTAAGAGCCTTTTTTTTAATCTTCAGAATAAAGAAAGTCTGATACCTC
ACCCTCTTAGATTTTGATGAAATTTTGACCAAATGATCTATCACACAAGA
AAATAAGACTCTGAAAATTTCAGCTTGATATCTCAAGTAGTTTTGCAGAT
ATAGTGTCTCAAAGATAGGCTACTAAGCGAAAATTGANTACCTTGATATC
TCAAGTAGTTTTGCAGATAATAGTGTCTCAAAGATAGGCTACTAAGCGAA
AATTGAATCCTAAAAATCAAGAACTCTGGTGGGGAGCAGACTTTGAAAGC
CAATGAATTTTTATTCAAGTAAATTAGAAAGCTGATTTACAGTGGATTGT
AAGAACTTTTTGTAGGGAATCAGAAAAAATCAAATTGAGTTTAAAAAATT
TCCCCCGAAAATCTCTAGCACCTCCTGTAGAAGGCTTCAAACTTTGCGCA
ATCTGGGTTTGGAAGCATTTTTAGCTGGCTGCTGATGGTCCTTTTGACTT
TTTTGAAGCAAACTTTTGACCTGGAGTGGTTTAATGGTGGGTTTTGGCCA
CAAAAATAATAACCTTCGTAACCTTAAAATGACCAAAAAAATTGCTATTT
TGGCAGATCTGGAGCAAAATTCAAGATGGCGTATCTTTTTAAGGCAGCAC
CAAATTTTTTTGAAACTTTCAGCAAGGCTTTCTTTGTAGGTCTAGTTAAT
AGCCTCAAAAAATCTCAGTGGGCTTTTGAAGTCTCTTAAAGATATGACCG
GGTGAGGTATCACACCCTGAAGACTCTTTAAAAAAATGGCTCTTACAGGG
ATTTTTCTAAGCACTTTTTAACTACCGTATACCGGCAAAAATACTCAATC
CAAGATTGAGTTATGAAACTCAATCCGAAATATAAAAAAAAAATTACAAG
AAAAAAGTTTCAAAGCAGTTTTCTCAGAAACGCCAATTATTTGTTTTTAA
TCAGTAAAAAGTTTCGAAAAAGGCGATTTGATAAAATCGATCTTAGAAAC
ACTCTTAAAAGTTTCGAAAAAAGCGAAAAAAGAAAGCGAAGAAGCAAAGA
AAGCGATTTGATAAAAGTGATCTTAGAAACACTCTTAAAAGTTTCGAAAA
AAGCGATTTGATAAAAGTGATCTTAGAAACACTCTTAAAAGTTTCGAAAA
AAGCGCTTTGATAAAAGTGATCTTAGAAACACTCTTAAAAGTTTCGAAAC
AAGAATCGCAAAATTGCGACTAAATATTTCCTTAAAAATGAAGGTCATTA
TTGACATATATAAAAAGGGATAATTAGCCTTAGTAAAAGAAAGGTGAGAG
TTACAAGTTACGTGATTCTAAAGGTTCCTCCAAGTTCTTGTTTACGACTA
TGAGAATCAAACAAATACAATTTTGAAATTGAGATGTAATTGCCTTCAAT
AACAAGGAAGTTTTTATCAATAATGTCATATTTGTCAGAAAGTATTTCAA
CAGAAAAATCAACTTGTCCAATGACAGTGATATCAAAGTAATTATTTTCA
AAAATAATCCGAGGAAGCTCATAATTTAACAAAAATCTTTTAATTCCAGT
ATTTTTATAAAACTGGGTCTCCTTTGTAAAAAATGATCTAGATCATAATC
TTTCCAAATATTAACACAACAAACTTTTGTCCAACATATTGAAAAAAATG
TGTTAGTAGCACACTGCTTACACGCAGTCTCTCCAAACATTTTGTGTGCC
TGATTAAAGTTACCTTGGATTGTTTTTTCAAAAGTCATTTTCAAAAATCT
TAGCGTTTTATTAGCAAGAGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAACCAACAAAACCCACACCACCAAAATTGTAAAAATAAGTCAATATAAT
TTCTACGACAATTTCTCGTAAAATGTTTTTTTTCCAACATTCTGATACCA
ATCTGCAATCATGACTGGAGTCATCATGTGTAGAGTGACTGTGTATAACA
ACAAAAGTTATTGAAGTTATTGAAAATCATCCCACGGTCATGGTGAAGCT
AAAGGTTTATCAACCAAACAAAACTGACGCCAAGTCAAATCTGTCGATTA
AAAATTTCCATAAAAATTACAATCGAAACTTATCTCATAAAATGCTTTTT
TCAACATTCTGGAGGTGCTCAAAGTTAGAGGTATCATATGTAGAGCCAAG
CAATACATGAAAAGTCATTTGCTATCCCATTTGCCATGAGATATGAGTCA
AGAAATCAAACAAAAACCAACAAATCAAAAAACCAACAAGTCTCTTCACA
TTTCATGTCACATTGAATCGTGTTTTTATGGGGTAACCAGAAAGTCAATC
CACAAGAACAGCCATCTTCCTTTATTATGGAGTGTTCCAAAACTATTGGT
AGGTTGTTTGGAAGTAAAGAAACCCACACAGTTTGATTTATTTTAAAGAT
TTAACTTGAAAACAAAAAAAAACTGCATCTTTCTAGCAAAAACTCATGTT
TCAACCTGCTACATAACAATTGCCAGTCGGGTCTGCTACTAACATGTAAT
AGTTTTATTATAACCGGGCTTGAGAATCCGTAAGGAAGTTGTAACATATA
TTATATATATAGTTTATCAGTTGGCTTGAATCATGATACATTACTTATAT
TTCACTGGATGCATTTTTCGCTGTGAAATTAAAAACAGGCGTCGGTCAGG
GTGTACGGAAGGCGTTTTGACACGGGAAATTATTATGACGGAGAAAGCCC
GTTTTAATAAATATTTCCCTTTTGGAAAGCGGGAAATATTTAAAAAGCGA
TTCGATAAAAGTGATCTTTGAAACACTCTTAAAAGTTACGAAGAAAGCGA
TTTGATAAAAGTGATCTTAGAAACACTCTTAAAAGTTTCGAAAAAAGCGA
CTTGATAAAAGTGATCTTAGAAACGCTCTTAAAAGTTTCGAAAAAAGCGA
TTCGATAAAAGTGATCTTTGAAACACTCTTAAAAGTTACGAAGAAAGCGA
TTTGATAAAAGTGATCCTAGAAACACTCTTAAAAGTTTCGAAAATAGCGA
TTCGATAAAAGTGATCTTTGAAACACTCTTAAAAGTTTCGAAGAACGCGA
TTTGATAAAAGTGATCTTTGAAACACGCATAATTCGATAAAGAATAGAGT
AAGAGACAGGGGTGTATGTGAGATTTGTTCTCCGAAAACAAAACATGGTG
AAAAGTTCAGTCCCCACCATTTTTGAAGGAGAGATCCCATTCAAAATTTA
CGTTTTCTAGTTTCGAATGTTTTTATTTTGTACATGTTCAAAACCAATCG
AACACGAAAATCATTAGAAAAACTATTGACAATGACTATTACTAATGCTT
TTCGAGCGACTTTCTTTTCCAAAGCGTTCGTTATAAACGTAGAATTCGAC
TCGTTTAGGTTTATGACAAATGTTTTAAGAAGGTAGCGTTCGTCACTAGC
GTTTACTACGAAAACTTGCACGTTTTTCTTGATTAAATGAATTTTTAAGA
GAATCCTCATTATTACTTGTAAATTCTTTTGTAGATTTTTTCATAAAAAA
AACAGATTTGTTGTTATTCCTTCTTTCGCTTTTGCCACAACTCTTTCTAT
TTACCTAATCGGCCCTTTTTACGCCGGCCCTTATTGGCGTTATTTTTGGG
CTCGTGCGTGGCGTGATTAAGGGCCGTAAAATGGGCCAAATCTTTCTATT
TTTACTTAAGCGGCGTTAATGTATTCACTTTTTTGCTGAAAAAATTGCCT
TTTTATGGCGTTGCAGAAAAGATCGCAGAGAATTTGACCTGGCTACACTC
ATTTTCACTCATTTCGCCTGAAAAAATTGCTCAGTGTAGCCTTAGCTATA
AGGTCTCTTATTTTAAAAACTTTTTTCTTTTATCTACCTTTATAGGGGGC
AGGCTTCGGCATAAGAAAAAAGATGACGTGCGATCGTCGCACGCCTAGAT
TAAAATTTTGAGCCATTTAGACGTGCGATGGCATGCGAACGTTTTAAATA
AAAATTAGTTATTTTATCTCTCATTAGAAGGTGAGACAGGGTATAAAAGA
TTCATTTAATATAATTTTAAGAGTTTACATAGAAGCTTTCTTATATCAAA
GATTGAATAAAACAGAAAAACGAATTAATTCGAGAGGAAAAAGCGTTTTC
ATAAAATATCAGATTAAAAATGTGTTTCTCTTTGCGATATGAAGTAAAAT
CCCCATCCCCACTGAATCTTCTGACTTGAAAACGAAAGAATTGAAATCCC
CAGCAATAAAGAGTATGGGATTATTAATCCCCGTCGAGTTTTAGTCCGTT
ATTTTTACCCCCACTGGCTGAAAAAATCCCACCGGGTCTGTGAGAAGGGG
GTGTCTTTAAAAAGATCGATAGTTATACAGGGAGAGTGAGTGCACATTGA
ACAATATTAATTAAATATGCAAAAGTTGTTTATCAAAACGCTTTATTAAA
CAACTACATTCCTATCTGTTTGAAATTCAAAATAGAAGATAAATGTCTAG
ACTTGTAAAATGTAAAAGGAATTTTTTCGCATGTGCTACTCACTTGTTAC
TCGTTACTAAAGATAATAAAGATGTGCAATGAACCAAACATTTGTTATGA
CCTAATAACCAGAGAGAAAGAAAAATTACTCAGCAACAATTAACGAAGAA
ATTTTCTCTTCGGCAAAAAGGCAAGCAAATAAGGGAGTTTCTTCTTTTAT
GATGCCAGAGAGAAAAGCGTGGAAAGATTGAGAAAGAAACATTCTTTTTT
AAAGAAGTTTTTCTGCAAGTGCGATGCATTGCACGCCTGAATTGATTTTA
CATATTTACTAGTGCGAATCGCACGCCTCAGTGCCTTTGGGGTGCGTGTG
GAGGTGTGCGCGTGCGATCGCACGTCTCATATGCCGAAGCCTGAGGGGAG
TTTGTACTTTTATGGTGTGATGGGATTGGCCCTTTTTTAGTACTGTATTA
CAGGATTTGACGAAAAAAAGACAGGAGAACAATATTTTAAAATCAGACTG
TGACGGTATTTGGCCTTATTTTTGTCATTGTGCCGGTATTTGAACCTGTA
CAAACCGGTGTGACGGTGTTATTATTATTCAGCAAAAATTGAAGGGAAAA
TGGTATTTCGAACCCCTACAACCCCCCTTTATATTTTAAGAAATTTGTGA
ACAACGTTTGATTAATTTTACATATCTCAATTAAAAATTAAAGTTTGATT
GGTGTGATTAATCTTGTATAGGTCTGTAGTAAAATACACATTTTAAGTAG
CTTGTGAGTTATATTGATTGCGGTGTTCTTGTTGTCTAGTGGTAGCATGA
ACCAAAAGTACCTTTAATGTGAAGGTTTTCCCACTTGGGACTTTAGCACA
TTTCAAAATCTTTCATGCCCTTTTAGCGTCTGGTCATCAGACGCTGCCCC
TCCTGAAATTACTAAGATATTGGTAAAAACAGCCTTTTTAATGGAAAAAA
GCTGGAAAAGTGCCCTTTTTGGCCACCAACAGGCGCTGTCTTGCCTTTCT
AAAAGTAACATGGCCTGGGTATTGTTCAGTATTGTAGATTTCATTGCAAC
CTAAAGTAACATTGATTGATCATTGAGCTTTTTTGTTTCAGCTCAAACTT
TTGGAAACAAAGAAAAAAGCTGACAAAGGAGAGGAATTGAATGATGATCA
GAAGGTAAAAAGATTTATTTTGCAAAATTATAACCCAGTTTTAAACTTTT
TGTTCAAAAGCAGGTTTAAAATCTAACACCTTTGCCTCCATAATGATTTT
CTATTCTCTAATTTTTATAGATTGCCCTCAAAAACTTAGAAGCTGTTGAC
TTTGGTTTGGAAGCTGTCAAAGATGTTCGGAAACTGATTTCAGCCTTGGA
AGGAGAGGTTTGATTGTCATTGCATTTTAAAAAAAGATATCTTCTGAAAT
TGTGAATCTTATCAAAAACTGTTGAAAGCTCCTTTCAGTTGATGTTGAGT
CTTTCAAAGTTTTTTTTCTTACTTTCTTTTTAGTACGCTAAGCTTATTAA
GAAAGACCAGAAAAGGCAAAAACAAGAGCAAAAGGATGCTTTGGAAAATC
GTAGCCAAAAGTATGTTTTTGATGTTGTTGACGCACAAGCTATTCTTGGA
GAAATGACTGAAGATGTTCGACCTGATTTTCTTGCCGGAGCTAATGGTGC
TTGTTTACTAACTGAGACTGAACTCGAAAACTTAGATGGGATTTATGAAC
TTATTAACCCTGCATCCAGTGAAGAGAAAAGCAAGAAGCTTTCCGAACGA
TCTAGAACTGCTGGTCAGCATCTTGTATCTTTAGTTGAAGGCAAAAACTC
AGCTGCTGTTGAAGAAGTAACTTACAAGGACATTAACAATATTTTACAAA
AGATTAAAACATGTGGATATTTTGACAAAGAGTCTTCTGAATCCCCTGCA
GCTGTTGAAGAGACAGAAGCATTGAGTGAAGAACAGAAGCCAGTTGAAGC
TGAAGTGGTTGCAGAGCCTGAACCAGAAACTCCAGTTGCCGAAGAATCTC
CAGTTCAAGAGGTACCTCATAAGTTATGGTTCAATTTCCCAAGCAAAGAT
TTCTGTGGAAAATTTAGTTTAAGATGATCAAATTCTAAAATGGCATTTTT
CTTCCATTTCATCAGGGTAAGGCTCCTTTTGCCAATTGGAAAAAACATTT
TGACAGCCATTAAAAGTAAAAGTACACTGAAAATTTATATCTATTCACTT
ACCTTAATTAAATATTTTTCAGCTTTTCACTTTACCCAGATCCATCATAA
CATAACAATTTTTAGTGTGGGATATTTCCTAATTTTCATAGGTAGTTGAA
ACTGCACCAGTTGAAGTTGAACCAGTAAATGGTGTTGATCTTCCACCAGA
AGTCCAAACTACTCCTGAAGAGGAAGGAATCAAGTTCATGGGAGAATCAG
AAATATCTGCAGGTAATTGACACTCTATCCACCATGATCATATGTTATGA
TAATCCTTTTTATTAAGCGTATCGTGTATGAAATTCTCGTCCGAGAGTTA
CCTCAGATTTGGAGTAACCAAAATTTGCATAAATTTACATAATTTCGTCA
CATCCAATCAAAGAAAGAAAAAAATGAAGTCCTTGCTGGTCCTTGTGCTG
TTGTTTTGATAATTATCAATTTTCATTCATTGAACAAAGAAAAAAAGAAG
TCATTGTATTGCTATGACGGATTATCAAAAAGAAAAAAGAAAAGATGGTA
AGTTGGGACAGAAATATTTTAGATGATGTGATGCGTGCTGCCTAAGTAAA
TACTGGTTGATTGACTTTTGAAAATTTATCTTGTATTGTGATAATTATTT
TACTTTCAGCTGTTCAAGAAGCTCCATTGAACCCTGTATCTCCCGAGTTT
GTTCCAAGAAAAATGCAAAACCCAGCTGAAGATGGTTTTGAAGGTGGTGA
AACAAACAATTCTGATTGGCAACAAAGTAATACTCATTTTCTTATTCAAG
TGAAGTGAAGACAGGGCTATAAACCCATTTCAAGCTTTTTAAAGGTTTAT
GGGGCATCGAAGCCATGTAAAGTTTTGTCATTTTGATTGCTTTGGTTTTG
ACTGTGGGATGGATGATTGTGCTCTTTCAGAAAATGTCCGTACATGGGGG
GTAGCGGTAAATTTGCTCTGTCCGGGGGGTAATTTAGGTTGTCCAGGGGG
TAAATCACTGAAAATTGTTATATCCTCTACCCCCCCCCCCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCATATTAAAT
TTTTGGACCTACACCGGTGGAGGTCCTATAAATTAACCTGTGTTTGTTCG
TTCGTTCGTCTGTTACCAACTTCTCTCAGGATTGAATCATAGGAATTATT
TGATTTTTGGTACAAAGGTGCAAAATGGTGGGTGGCCAAAATGTGACGGA
GCCCGATTTTCGAAAAAAAATTTTTGGCCAATATGGGCCAAAAAAACGGC
TAAAAAACGGGTTTTTTCGACTTTGTGAAAAATTGGATCATTATTTTTTT
CTGATTTTTTGTATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCA
AGCAGATTTTTGCAAAAAAAGTTTGTTGGCTCAAAAAAGGCATGTTTATC
TATCAGGGTTCAGACAGACCCTGGAAAACCTGGAAAACCTGGAAATATGA
TAAATTTTCAGAAAACTCAGGGAAACTCAGGGAAACCCAGGGAAAAAATT
TTTTTTTCCCAGTTTGCTCAGGGAAACTCAGGGAATTTTATTTTTTGAAG
AATGAATGGAAAAAACAGATTTAAAAGTTTTTTTAGTATTAAAGTGTTTA
TTCATATGCAGTATTTGTAGCTTTAATTTTTACCTTAGGTTTACCATTTG
ATTTGTGTGCCTTTTGTTTAAAGATACATCTCTTTTGACTCTGCTTAGTT
TTTATGGTTTGCTTGATACTCAGGGAAAAAATAGCTAAAATNNATTGATT
AAAATTCAGGGAAACTCAGGGAATTTTATTTTCGAAGGTCTGCCTGAACC
CTGACTATGTGAATCACTATTCTCAACTTCAGTTGAGCTATAATCTGAGA
ATGTCTGTATGTATGTCTGTATGTCTGTATGTCCGTCCGAAAACTTTAGG
GCAGGCTGGACACTTCAAAAAAGGTCGGATTTGGCTGAAATTTGGCACAC
TTGTTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTATGAAAATT
TTGATTTTTGGGGCCTGGGGACAAGTTTTTCGCCAAAACGAGGCTAAAAC
TTTGGGGCAGCCTGGACACTTCAAAAAAGGTCGGATTTGACTGAGATTTG
GCACACTTGTTCCTTGGGGGAATATCTGGGGGTGTTTTTTTCATTTTTTG
AAAATTTTGATTTTTGGGGCCTGGGGATGAGTTTTTCACCAAAACGAGGC
TGGCAGCCTGGAGACTTTAAAAAAGGTCGGATTTGGCTGAAATTTGGCAC
ACTTGTTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTCTTTGAAAA
TTTTGATTTTTGGGGCCTGGGGACGAGTTTCAGCCAAAACGGACAAAATA
TATTTGCTACCTAATACTAAATATTTGAAATGTTACAATTACAACAGGGC
CTTCTAATAACGGAAAATCTGAAGTTGAGCCCAGTGCGGTGCGCACGTTC
GACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTTT
TTATGAGATAGATGTTTTTTTGCTCATGAGGGCTTACTTTAGAGGGTATG
TGTGTTTAGACATGACATTTTGGTTGCTTAGCGTGTTTTTAAAGAAAAAC
TGGCGAAGTTCGATATATTTTTTTAAGCACATTATCAATTACTTAGGTAT
TAGCTTTACTCGAGATTGGCTTTTTCATTCTTTATGATTTTTTGCACAAA
GATGCATAACTTTAAACCCTCAAATGTGACGGAGCCTGATTTTTGAAAAA
AAGTTTTGGGCAAATTTGGGCCAAAAAACGGCTTAAAAAACGGTTTTTTG
GACTTTGTGAAGTATTAGATCATTGTTTTTTTCTGATTTTATACATGAAA
GTAGGTAAAAGATGGCTCAAGCAAATTTTTGTGAAAAAAGAATTTTCAGC
TCAAAAAACGCATCTTTATTTATAAGAATCACTATTAATAAGCATACATC
AATGTTATTAGCCAAATTACTCAATTTTTTAATGAAATGGATGTTTTTTT
TTGCTCACGAAGTCTTGAATATGAAAGATTATTTCAAAAGCATGAAATTT
TGGTTTCTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTGATAGAT
CGTCACTATTTGTGTTCTGAATGATTGTTTAACGGTCATGCTCACGTAGA
TATCAATTATATTTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATC
ACTTGTTTTTCTGGAAAAGCCCACTCTAGAACTTTCTTTGCTTTCAAGCT
ATAACTTTTTCAAATTCTGGGGGTAAATGTTACTATCAATCCAGCGTTTG
AATGAAAACGACGGGCCGTGCAATAAACGTAGGAAATAATTGACATTGGA
TCCTTCATGGGAGATTCAATTCTAGGCTTAGGCAATACCTTATTGGTTAA
TTTCTCCCTCTTTTTCTCAACTTTCGGAATATGTGTATTGGTCTTTTGAA
AATCCCTAGATGTGGAAATTTCCCATTCATTTGGTTTTTCTGTTTTGATT
TGGTAGCATAACCAATCACAGGGTGGCCACACATGCTGGAAAAACTGGGA
AAAATTTTGAGTCTAAAATGACTTTTTTATAAAAAGTTATTGGAGAAAAA
CCATTTTGTAGGAACCATAGACAGCGTACTTTTAACACAAAAAGTTTCAG
CCTAAAATTCCACCTAAATTTTCAGATAGAGGGTACTTCTATTTTTGCAG
GTTTAAAGCGGTATCCACTGGTAATAATTTTGCACTCGCTTGTATAACTG
GAAAAAAGTACGGATTTTTTGGGTGAATGCTGAAAAAAGGTACATTTTCA
AGCTGAAAATACCGGGGGGGGAAGGATGTTTATGACCAAAAAAGCTGGAT
TTGCATCTAAAATAAGCATGGTCACCCTGAATTATATTAATAAACTTTAT
CTTAATAAACTGATTTTTCTTCTAGTTGAGAGCGGCCACAGCAACCATCA
AGGAGGAAACTACAGAGGTCGTGGACGTGGTCGAGGTCGGGGTGGCGGCT
TCCGAGGTCGTGGAGGAAACAGAGATGGATCTGGTAACTACCGTGGTGGA
AACAGGGTAATAGCACTTTTCATAGCTTTGATACTCTCTCGTTATTACAG
AACATCCTCATAATTTAGTTAGTTTTATTGCTGATTTATGTATCTTTATG
AAATTTGTAAATTTGTACGACCTCTTGTCATTTTCATCTTTGATGAAACG
TTCTTTCTTTTTCAGGAATACCGAGGTGATTACCGAGGCGCTCGTGGTGG
TAATCGTGGAGGAAGCGGAAACTACCGTGGAAACCGGGAAGGCGGACGTG
GAAATTTCCGTGGTGGAAATCGTGAGGGTGGTCGTGGAAATTATCGTGGT
GATCGTGGTGGCCATGGTGGAAACCAACAGCAGCAGCAACAACAATAATT
TCCTCAAACCTTTTCTTTGTTGAATTTAATTTAACGATGCGAATGAAAGA
ATAAATAACTGGAGAGTTGGTAAACGAGTTGGGTTTGAGTTGATTCTCGC
TCCTCTCGTCATGTTTGGACAATACACGACAAACAAACAGACAGACAGAT
GCAGCCAATTGTTGATTGAGCTCTTGCTATCGCTCTTTTGATGACAGCAA
TTGGCATTTTCCCCACAAAACAAAACCTTTTGATGAATTTAATTTGAAAC
AAACACGTTGATTGACAGATTGTACCGATTGAAACATTACGGCATGAACA
AATGATCTACATTTGCGTTTTTAACGTCTCACGGGTCTTAAAATCAACGG
ATAATATTGATTTTTTATATTTTTTATTTTTTCACATGTTACATACCAAT
CTGCTTCTTCTTTTGGTACTTCTTAGAATTCTTGGGTTCCTTTTTTAGTC
TTTTCTCCCAACCCAAAGAATCGTTTATTCAATCTATCGTACTTGGCATT
TGTATTAAACTTGTGATCTTGAACTACTTGGACCTTTTTAGTGCGAAATT
CTAAATGACATTTGAACATTTTGTTACTCGTTTAGAAAAACGATTTATGT
ACTGTAAGATGCCTGTTTTCTCTTTTCACTTTGTAAATATGACGCCTAAC
GTTTTTTCACTCATTCATTATGTAGTGACGTAACAACATATCAAATCGGT
TAATCGTTGAAATTTGAAATAATTCATTTCTTTCTGTTTATATCCCCCAT
ACACAGTTCAAATTCACCGTCTTTTCTCTCTAACTCGGACCCAGTCTTTA
TGATTCTGATAGCGCTCATGAGTGTGCCAACCATTGAGTTTCAAGCCCGA
AGGGCTAGAGGTCAATCTCTAACCTTTCTCAAGCAAGAAAAATCGAAGCC
TTTAAATATGCGCCGTATTTTTGATGACGGATTGAATCTAGCAATTCATT
TGTTTACGATTGATATATTTTTCAAAATTAACCGGTAAATTTTAGTTTCA
ATCTGTCATTTGTGTAAAAACCAGGCGGGTCGCTCAAGGCCGCGCAACTT
TGGTAGGATTTTTTTTTTTTTTATTGATATCTCTTTTATCACCAATAGAA
ATGGTATATAAATATCTATGCTATGTATAATAAAGTAGTGTTTTTTGTAT
GTACAGTTAAAAAGTAAAATATTTCTCTTTCGTTTTTAAACATAAGAATA

Coding sequence (CDS) from alignment at scaffold_71:1336074..1352473-

>TCONS_00072228 ID=TCONS_00072228|Name=TCONS_00072228|organism=Clytia hemisphaerica|type=CDS|length=1518bp|location=Sequence derived from alignment at scaffold_71:1336074..1352473- (Clytia hemisphaerica)
TCGGGAAAAACGGGGAAAATTAAAAGGACGCGCATCTCAATCTATCCCAC
AATACTTTTCTCGCATGATGTAATCTCCCCTCATGTGCGTCGCCTTCGAT
TCAAACGTGCTGAAACTTTGTGGAATTCATCAAAAACTGTGGAAAAAAGG
TTAGGGAAAATGCCAAGCGCCTCATCAAAACCCCAAGCATCTCAACAACA
GGTTGCCACTGTGGATATTCTCCAGGAACCTATCAAGTCTGCCCTTTCTG
TTGCTGATAAGAAGCTTAGAAACTTGGAAAAGCGAAGACTCAAACTTTTG
GAAACAAAGAAAAAAGCTGACAAAGGAGAGGAATTGAATGATGATCAGAA
GATTGCCCTCAAAAACTTAGAAGCTGTTGACTTTGGTTTGGAAGCTGTCA
AAGATGTTCGGAAACTGATTTCAGCCTTGGAAGGAGAGTACGCTAAGCTT
ATTAAGAAAGACCAGAAAAGGCAAAAACAAGAGCAAAAGGATGCTTTGGA
AAATCGTAGCCAAAAGTATGTTTTTGATGTTGTTGACGCACAAGCTATTC
TTGGAGAAATGACTGAAGATGTTCGACCTGATTTTCTTGCCGGAGCTAAT
GGTGCTTGTTTACTAACTGAGACTGAACTCGAAAACTTAGATGGGATTTA
TGAACTTATTAACCCTGCATCCAGTGAAGAGAAAAGCAAGAAGCTTTCCG
AACGATCTAGAACTGCTGGTCAGCATCTTGTATCTTTAGTTGAAGGCAAA
AACTCAGCTGCTGTTGAAGAAGTAACTTACAAGGACATTAACAATATTTT
ACAAAAGATTAAAACATGTGGATATTTTGACAAAGAGTCTTCTGAATCCC
CTGCAGCTGTTGAAGAGACAGAAGCATTGAGTGAAGAACAGAAGCCAGTT
GAAGCTGAAGTGGTTGCAGAGCCTGAACCAGAAACTCCAGTTGCCGAAGA
ATCTCCAGTTCAAGAGGTAGTTGAAACTGCACCAGTTGAAGTTGAACCAG
TAAATGGTGTTGATCTTCCACCAGAAGTCCAAACTACTCCTGAAGAGGAA
GGAATCAAGTTCATGGGAGAATCAGAAATATCTGCAGCTGTTCAAGAAGC
TCCATTGAACCCTGTATCTCCCGAGTTTGTTCCAAGAAAAATGCAAAACC
CAGCTGAAGATGGTTTTGAAGGTGGTGAAACAAACAATTCTGATTGGCAA
CAAATTGAGAGCGGCCACAGCAACCATCAAGGAGGAAACTACAGAGGTCG
TGGACGTGGTCGAGGTCGGGGTGGCGGCTTCCGAGGTCGTGGAGGAAACA
GAGATGGATCTGGTAACTACCGTGGTGGAAACAGGGAATACCGAGGTGAT
TACCGAGGCGCTCGTGGTGGTAATCGTGGAGGAAGCGGAAACTACCGTGG
AAACCGGGAAGGCGGACGTGGAAATTTCCGTGGTGGAAATCGTGAGGGTG
GTCGTGGAAATTATCGTGGTGATCGTGGTGGCCATGGTGGAAACCAACAG
CAGCAGCAACAACAATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044840	XLOC_044840	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00072228-protein	TCONS_00072228-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_71	supercontig	scaffold_71:1336074..1352473 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
208.616	213.018	182.936	178.946	334.626	261.242	309.841	331.672	460.021	431.504	590.314	517.558	776.745	851.132	546.57	552.889	456.656	520.543	247.862	313.029	453.086	459.592	405.407	440.8	615.006	717.278	331.101	434.575	304.815	324.967

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00072228 vs. Swiss-Prot (Human)

BLAST of TCONS_00072228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00072228 (transcript) - C. hemisphaerica