TCONS_00072416 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072416
Unique NameTCONS_00072416
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2242

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072416 ID=TCONS_00072416|Name=TCONS_00072416|organism=Clytia hemisphaerica|type=transcript|length=2242bp
ACTTTTACTTTCCACAGAGAGGAAcatagtttaggtataaacttatttct
ctctttatgatttttgttgtaaGAGGAACAAGGAAAGTTACATAAATAAA
AGTTGTGAAGGTCTTTTCTTATCATTTTAAACTCAACAAGACACAAGATG
cagagaatatttttgttagtGCTGGTCGTTGGATTGGCAGCTTGCCATGG
AAGGTACAAAGgGGGCAAAGAGAGATGGAGAGAGACAGATGAACGCTTAT
CATTCCAACTTCCAAACGAATGTAAAGTAGCTATTCATACCAGCGATGAA
ACATGTCAAAAGGATAGACTGACCGATATTGCGAGGGCTCGATATTGGTA
CATACTTTCAGATGAAAACACCAACATTGATTTCCCTTTGGCTCATGAAA
TCCCATGGTTGGCCCATAACTTAACGGCGGTTAATTACTATTACGCATTG
GATCCATTCGAATCGCGATACATGGTACTTCTCAGCACCTGGTTTTCTGC
TGTTACCACCACAATTACGCCAGCCATAACCAAGGCTTTCGCAGGTTTCT
CTTTCGAGTCCAACCAAGAGTATGTTGCGTGTTATGGTGCTTTCCAGAAG
GCCATACAGGCGCTTCAAGCCCCGCAATACTTTGGCAATCCTGCAGAGTA
TCCCGACTTTACGGATCACATCACCAATGGTTATTACCTGGAAGACAATG
CGTTTGTTCAACGAAGACTTGCGGGACAATGTCCTTTCCTCATTCAAAAA
GTCATCACTGAGGGTGAGAGAGGGTTCAAGCTGGACGATTTAATGCCTAT
GTTGAACCAAGACTTTTTCGAGACGTTCGAGATGAAATATTCCGATGAAA
TGGTCACCATGGAAGAGGCCATCAATCATCACCGTCTGTTCGTCCTCCAT
TTACCGAACATGAAGGACATCCAGAATGCACCGGACGCTCACGGTGATCT
GTACACCGACCGTAAACTCTCTCCTCTCACTTCACCGATCTCATTCTTTC
TGTTGGGAGATGATGGTTTGTTGAGACTGGTGGCCATCCAAAGATATCCC
AAATCATCTTCTGAAGTGTACACACCATCAAGTGAAAAGAACATCTGGTC
GTTGGTCAAAGGAGAAGCTGAGCTCGCATCTGACATGTACTGtcaatcaa
aaattcacttAGGAGGCGTTCATTTCGTGTCCACCATCTATTGTTTGTCC
TTTAGAAGACATTTAAGCACCAAACACCCTCTCTACGATTTCTTTAAATA
CCATTGCGAAGGGACTGTCCCTCATATCACCACAGTCTTCGGGACTTTGA
CCACACCCAATAGTTTGGGTAGCAAGCTTTACGGAATAGGAAGTGAAGGA
CTCGTCAAATTGGCCAAACAGAGTTATGATGAGAGAAATTATGAACACTC
CACCTTCGACTTCTTCATTAGGGGTCAAGGTTTAGACGATACTCGAATCA
AGTATTACCCTTTCCGTGAAGACGCCATTACATTGATAGGAGAGTTCAAC
ATCTTCATTGAAAATCTTCTGAGGCGTTATTATGGATCAAATTCTCATCG
CGTCCGCGCGGACAAAGAATTGCAATCATGGGTGAACGAATTGTCCATTG
ATGGGAAAATTCAACCTGATGGCGGAAAAGGAAAGGTCATTGCTTTCCCT
TCATCTTTCCGTTGGCGAAGTCAGTTAAAGACTTTCTTGCAACGTTTCAT
GTGGATGAACATTTTTCACACGTCAGCAAATTATTACACACACCGAGATT
TCCTACCAGCTTCTCCAAGTAAATTTTACGAACTGAACAATGGAACACAG
CTCCCTTATCTTCAAGCACTCTCTGGAAAAGCATACAATGTTGAATATAT
GAGattcgaaggaatgttgaacAACTTCCGAGTGAACAGAATTTTCTCAT
ACTGGAAAGACATCACAAACCCGACATACCGACGAATTGTGCGCAAAGCT
TTTTATCGTTTGAACACCATCGTCCAAAAGAAGTTAGAAACAAGAAATGC
TGAACGTAAAGCCAAAAATCAATTGGGTTATCAAATCATGGAACCAAAAT
GGCTGACAAATAGCATTCATATTTGAAAtatatctaaaatatttttatca
tcttTATAAATGCTTACCCGGCAACCAAGCAAATCTTTGTCTTTAGTTTT
GtgtaatttatcattttttgattCTTGTTATTTTTCCTAAATACTTCatc
tgaaaaaatagaaaataaaacgTAAGTTAACTACATCAGGAG
Run BLAST on NCBI

protein sequence of TCONS_00072416-protein

>TCONS_00072416-protein ID=TCONS_00072416-protein|Name=TCONS_00072416-protein|organism=Clytia hemisphaerica|type=polypeptide|length=642bp
MQRIFLLVLVVGLAACHGRYKGGKERWRETDERLSFQLPNECKVAIHTSD
ETCQKDRLTDIARARYWYILSDENTNIDFPLAHEIPWLAHNLTAVNYYYA
LDPFESRYMVLLSTWFSAVTTTITPAITKAFAGFSFESNQEYVACYGAFQ
KAIQALQAPQYFGNPAEYPDFTDHITNGYYLEDNAFVQRRLAGQCPFLIQ
KVITEGERGFKLDDLMPMLNQDFFETFEMKYSDEMVTMEEAINHHRLFVL
HLPNMKDIQNAPDAHGDLYTDRKLSPLTSPISFFLLGDDGLLRLVAIQRY
PKSSSEVYTPSSEKNIWSLVKGEAELASDMYCQSKIHLGGVHFVSTIYCL
SFRRHLSTKHPLYDFFKYHCEGTVPHITTVFGTLTTPNSLGSKLYGIGSE
GLVKLAKQSYDERNYEHSTFDFFIRGQGLDDTRIKYYPFREDAITLIGEF
NIFIENLLRRYYGSNSHRVRADKELQSWVNELSIDGKIQPDGGKGKVIAF
PSSFRWRSQLKTFLQRFMWMNIFHTSANYYTHRDFLPASPSKFYELNNGT
QLPYLQALSGKAYNVEYMRFEGMLNNFRVNRIFSYWKDITNPTYRRIVRK
AFYRLNTIVQKKLETRNAERKAKNQLGYQIMEPKWLTNSIHI
Run BLAST on NCBI

transcript from alignment at scaffold_77:204235..214742-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072416 ID=TCONS_00072416|Name=TCONS_00072416|organism=Clytia hemisphaerica|type=transcript|length=10508bp|location=Sequence derived from alignment at scaffold_77:204235..214742- (Clytia hemisphaerica)
ACTTTTACTTTCCACAGAGAGGAACATAGTTTAGGTATAAACTTATTTCT
CTCTTTATGATTTTTGTTGTAAGAGGAACAAGGAAAGTTACATAAATAAA
AGTTGTGAAGGTCTTTTCTTATCATTTTAAACTCAACAAGACACAAGATG
CAGAGAATATTTTTGTTAGTGCTGGTCGTTGGATTGGCAGCTTGCCATGG
AAGGTACAAAGGTAAGGAATTTTGAATAATTAATCTTTTTGAGCACTGTA
CTGACTGTACTACACGTTTTTTTTTTATAAGAACAAACTATATAAGAACA
TAAGGCTTCGAGCCCCAAAGTTTAAGAACATTCTAAGAACATACTAACAG
TTAGTACAAGTACATCGATTTGTGAAGTGTCTCTACGTCATATAGAACAA
TAGAAAATAGCAAAAGAACAAAGGAATTACCCATAGCCACCATTTCGCAA
CCATGGGGGATCGCGATTTTACGCAAATGAGAATCCTCATATCGAATAAA
GCGTCTTCTGAAAATTTCATTCTTCCCCATAAATGCGAAAATGAAAAACG
AAGAAGCTTTCGTTTTCTAATTGTCTTTTTAATCTGCCACGAAGTGTTAT
AAAATTCCTTATAAAAAGACACGTTCTCCTACTAAGAGGTTTAAAAAATG
ACGTAGAAACAAGAAACTGTAAAAATAACCGTAATTAATCAACGGTCGTT
AAAACCAAACTAAAAGGAATCGCGTCAGCAGTAAGAATTCCCATAAGATG
GTTTTAGAAAGTTTTCAATGAAATTATTTCTGAATGACTGAGAATTTCAC
TTCACAAAAGGATAAGTTATTCGGGACGGACTGAAAGGTGTGGCTAAAAG
CGGATAGGGATACGGTGGAGAAAATTAAAGAAAAATTAAAAACACGGGGA
AAGCAAAGAAGAACATCTATTTTCTTTAAATCCCAACAATAAAAAATAGA
GGCGCACTTATCTTAATGCATAATGATTAGACTATTTTTAAGCATAATAT
TGAGCAAACTCAATGATACTTTGTGATATTCAGCGTCATCAGCGTCAGCG
TCTGCTTTCTTTCTCGTGTTTAAAAATGATACGGTGGGCCCCCTAAACCA
AAGAAATCAGATAAAAAAAGAAAGAACATACCCCTAATACTATAGCATGG
GTTACTCTCGTGATTACCGTAAGAGGATAAATTTTGGCGGGGATTAAATT
TAGCGAATTTTGCGAATTTTGTCTTTTATCCATGCCAAAGACTAATCTAC
TTAAGGTAATAGCCGGGGATTCTTGTAATATGTTCTGTATGCGAAAAAAA
ATTCCGAAACTAACCTAGTAGAAATCAGATTTCACCTGTGTGGAAATTTG
TTAAAAATCAGCGCTGGACGCGTAGCCTTCTAGTATAAGAATTATGCAAT
TGTCAATATATTTTCTTTTTCAGTTAGAAAAATACTAAAATATCACTAAA
ATATCTCACACGGGACCACGGGACGAAACGATGTAAACAATTGAAAGATT
ACTCAAATTCAAAGCGATGAAACAACACGAACACCCTCGCGCCATCCAGG
AATATTATGTTGATGGCAGCTTGAAAATGAGAAAGTAAGTGATTATACAT
CTTGACTTGTTCAACCCACAAACCAAATTCTTGCAAATCCATTAAAGGGT
AAACTTCCGTGCTTCAATGTCTCAGAGTGTTTGTGCCCGTTCCCCGTTTA
TTGATTGTCGAATTTAAAGCAGAAGAAAANCTGTGCTTCAATGCCTCAGA
GTGTTTGTGCCCGTTCCCCGTTTATTGATTGTCGAATTTAAAGCAGAAGA
AAAATTTCCGGGTATAAGTTTGAACAACAATCACGTTAAATTTTGAACAT
TTGACTTGGAATTTAATTAGATGGAAAAACTTCCATGGTTTGAGAGATTG
CAAAATATATGTGTCAAGGTTATTTGTGCCTTTTTACTTGACGTTTGTCA
GCCTGTTAAAAAGCAACTATCATTCTCTGTGCTATAACTTCATTACTTTT
ACTCCAAGACTGGTAGCTTTTATGTGACAGGGGTATATTTTACTGAGACA
GGGGTATATTTAGAATAGAGCCTATCCCAGGGTACTCATTTTTAACGGAC
AAGGCAGGCCCAGTGAGAATCCTATCCATTAGAAAAAATCGCCATCCTAT
ATGGAAACTTCACTTGTATGTAAAAGACAAGTAATGAATCTAGTAATTCA
GACTGGATCTCTGTACTATTATCGTAAAATCTAAATCCACTAAAAACAGA
CCTTTTTTCTATTGGTTTTAATGTTCTTTTATGTCCCTTTCCTAACGGGC
TAATAAACGACTCGGACTTTTTGAGACAGGGACGTTCCCCTCGCAAAAAT
GAAAAATGTATAGCAACGCTTCCATTTTTTTTCTTCAGAATATCGCTTGA
CTTAAAGACGAAGGGCCCGATGAACCGTCCGTGACAGACAGTATTATCGT
CAAGCTGTGAAGTAAACAGTGATGGTAGTGTTATATTACCCTAATTGTAA
TTTATCGAAAGTGTACGTAAGGTAAAAAAAGCTAAAAGAATAAAAGCTTA
TCTGGCTAAAAAATATAAAAGCCATGGATTATTTTACAACTAGAAATATC
TTTGTCTTCTTTTCGTTTTTCTTCTAGCGCCGGACCAGATTTCTAGATAG
AGATAAATACAATATATAGAGTCCCTCTAAAAGCACCCCGTGCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGGTATAAAATTGAATGGGGATTAAACCGATT
TCTGGTTTTGATGGCAGCAACTTTGACAGTCTCAAAGTATAGTGGAATTT
CGTCCGGATCTCGGCTGATCACGAAACTAAATGAATTTGAAAGAAGATAC
GACTCTTACCCCCAGTGAAGATGACGTGCTCATGTCCAATCAATCTGGTA
AGAATGCATTAAAGGAAAAAAAATTAGAAAAAGATTGAGGTTTCCAAAAT
TAATTCTCGCTAAAATTAATTAAAATCTTTGAAATCAACTCATCTGAACC
CGGCTGTATTTCTCCACAATATATCGAAACTAAAAAGTAACGCTTTTACA
CCGTATATCTAACTGTACAATCGAACGTTACATTACATGAACGTTGTGGA
CGTTTATGTTTATGTCAGCTGAGGTGTTGCAGGGGGGAAACAACGGGATG
GTGCCTGTCCTTAAAAAACGCCTTTTCGCTACTTATTCATTTAAGATTAC
ACTCAAATGCATTTAGTCGATTTAGTATTCTCAAAGGTATTTCAATATGA
CACTTTTTACGAGGAAGATGTTTATCGATTACAAAACTTACGTCACAACC
ACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAGAACATTTTAAGAACATTTTTAGGCTTCAAATCC
AAAAAACTAAGAACATCCGAAGGCTTCGAAAATTTTTGACGTTCTTATAA
AAAAAAAACGTGTATGCAATCTGTTTTTAAGGAAACACCCACTTTGAAAG
AAACATAACCGGATGCAAGTATTAGACAAAAGTTAGGGTAAGACTTCACT
TCCTGGACTAAATATTCACATTCCATAGACTTTGTCGGGACATTTCCGCT
GTTTTTTTTTAGGATAACCGGCCGAAAATTGTAAAGGGTTTTTCCAGATT
TTCTGTATCGGATTGGATGATGCTCGCCGGATATTTAGTCTTTTTTCGCT
GAAGAATAGCAGTGGAATTTTAGTCCGGAAAGTGAATGACAAGTGAATAA
CAATTTAGTTAAAAAAATTATTTTTCTTCATTAGGGGGCAAAGAGAGATG
GAGAGAGACAGATGAACGCTTATCATTCCAACTTCCAAACGGTAATGACT
TCAACTTCATGAAATCTTTTGATCAAAATTTACAAACAGAGTAATGGAAA
ATAAATTTTCCGTCTGTTAGGTCGATTTCTAACGTTTCTGAAAGTAACTT
TTTTACTCAGTAGACCTTATCGGAGTTTTTTATTTTTCTAAAAAAGCGAT
GCATTGTGGGATTGTTTCGAGTGTATTACAATAGAATTCCCTCGAGGAAT
TCCTAAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTCCCTCGAGGAATTCCTAAGAGATTTCT
ATTGTAATACACTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAA
TAAAAAACTCCGATAAGGTCTATTGAGCAGAACTTTTGGTCTAATGAACA
GAATTTAATAAATGACCCATCAAAATTTAAGTTGACCTTCTTTCTTTCCA
ATGAAATAGGAATGGTTCTTTTAAAATTTTTAGATTTCGAGAAAATTAGT
TTCAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTACTTTTTCCTAAAGT
CAAAGTTTCATCGATTACAGGATATTTGTTGAATCTCGTAAATCAAGACA
AATTACTATGTAGAGTAATCAGGAGTTTTCTTAGAAATCTATCTGATAAA
ATTAATCTTCCCTTACAGAATGTAAAGTAGCTATTCATACCAGCGATGAA
ACATGTCAAAAGGATAGACTGACCGATATTGCGAGGGCTCGATATTGGTA
CATACTTTCAGATGAAAACACCAACATTGATTTCCCTTTGGCTCATGAAA
TCCCATGGTTGGCCCATAACTTAACGGCGGTTAATTACTATTACGCATTG
GATCCATTCGAATCGCGATACATGGTACTTCTCAGCACCTGGTTTTCTGC
TGTTACCACCACAATTACGCCAGCCATAACCAAGGCTTTCGCAGGTTTCT
CTTTCGAGTCCAACCAAGAGTATGTTGCGTGTTATGGTGCTTTCCAGAAG
GCCATACAGGTAGGGTTCTACTGTGTGCCAGGCCTAAAGCTTCTTACAAA
CGTAGTACATGAAGCAAAGGAAAATCTCGTTTAGAATTCATGTAATACAG
AAATATGGGTGTTATATGATAATACAATACTTGTTAAGGGATATAATATT
AGTTTGTGAACAATTTACTATAATTTGTATATTCCATCATTTTTTTGCTT
ATTTTCTAAAATGTCTGAATTAGTCGTAGCATGCTAGACTAAGGATAATC
AGGACTGGATAATATGAAGTTATGTATAACAGTTCATTGAAGCTTAAGAA
GATTCCACTTTGGAATTTGTTTATGAAATCCCATTCTCAGTAAAAAAAGA
TTCCTTTCACAGTATTAGACCACGTTCACACACTACGTTCCGTTTCGCTC
CGAAACGAAACGATTCCGAAACACTATGTAAACGTCAAAATTGGAAACGT
AAAAAAAGAAGACGTTACAAAGCAAAACAGATCGAAACGGTTTCGCTCCA
CTATTTTCATCGGAACGGAACTGCTCCGTTTTCTTGTTTCAAAACGTTCC
GAAATGATTATAAGCTTCCTATCCGTAACAAATACCACACCGGAGCGATA
CGAAGGCGTAACGCCTGAACATGGTCTTAGAGTTAATAATAACTTCTACA
TTTCCAGGCGCTTCAAGCCCCGCAATACTTTGGCAATCCTGCAGAGTATC
CCGACTTTACGGATCACATCACCAATGGTTATTACCTGGAAGACAATGCG
TTTGTTCAACGAAGACTTGCGGGACAATGTCCTTTCCTCATTCAAAAAGT
CATCACTGAGGGTAAGAAACATCGCACATACGTTTGACTCTTGCTAATTC
GAACTATAGAAATAATTTTTAACTGTTTTCCTCTTGATCGGATTATAGAA
AGATTCGAATAATATAAGATCAAATTAAAGAGCTAGCCGGCACTGCAGTG
AAAGATATCCGAAAGGGTCCCAAAAAAGGAAACATCTGACGAAAATTGAA
CACAAAATTTCATCTTTTCACATCACCATTTCTTTTGTTCTCTCAGATTT
TCATTTTTCAAATTTCCTGATTCATAATCCTCATTTATTGACAGGTGAGA
GAGGGTTCAAGCTGGACGATTTAATGCCTATGTTGAACCAAGACTTTTTC
GAGACGTTCGAGATGAAATATTCCGATGAAATGGTCACCATGGAAGAGGT
ATTTAATAGACTATGTAGTTTATAATCCTTGTAAGACAGTGAATATGGGT
GGTGTATGATAATATGATGGTTGTTAAGGGATAACATTAGTTTGTATAAA
GTACTGCAATTTATCCCTTCTACTATTTTTTGGTGATTTTCTAAAATGTC
TGAATTAGTTTTCTCCAGTCGTTTGGTATCTTCAATCATACATCAGAGTC
TTCATGTGGCTCAAATTTCTTCAAAGTTTAAATACATTTTTCGAGTCTTC
AGTTAAAGTGAAGTACTCTCTGAACTAGTCTGGCAGCCTTTATCTGTTCT
ACATAACAGTTTTGCGTACCCTGCATGTGTTCGGGTTCTATTAGACTGGC
GCGCCAGTCTGGCTGGAACGGTATCACATGGGAAAAAGTGAGCGCAGGAG
TTAGGTAAGTGTAGGAAGAAATTTTGTCGGCGGCAAGGGCTGAAAGCTGT
TAATCAGCAGCCTCTCAACAACTTTTACTTGTTCTCCTACGCAGCTCCTA
TTTCAGCAAACGACGCCGCCTTTATGTTCCCACTCTCTGACATGATTAAT
CAACAGACTAGTTTGCTAGTCTAGGGTTCTAGAAAAAGGAGCTATATGGT
TCACTAAAGTTCATATCTTAAAGGATCTTCCTTTCTGTTTCAGGCCATCA
ATCATCACCGTCTGTTCGTCCTCCATTTACCGAACATGAAGGACATCCAG
AATGCACCGGACGCTCACGGTGATCTGTACACCGACCGTAAACTCTCTCC
TCTCACTTCACCGATCTCATTCTTTCTGTTGGGAGATGATGGTTTGTTGA
GACTGGTGGCCATCCAAAGATATCCCAAATCATGTAAGTAGACCTTTTCT
TTTAGCTGAGCGAGACCAATTTTTTCTTTTCACCCTCTAAATTAACAGCT
ATTCACTTCCTTATTCACGTTGTCGTTAAGCATCAACCTCTTTGAAGAAA
ATTGAAAATATCAGTACTTCAAATTCCTTATCGTTCCAGCTTCTGAAGTG
TACACACCATCAAGTGAAAAGAACATCTGGTCGTTGGTCAAAGGAGAAGC
TGAGCTCGCATCTGACATGTACTGTCAATCAAAAATTCACTTAGGAGGCG
TTCATTTCGTGTCCACCATCTATTGTTTGTCCTTTAGAAGACATTTAAGC
ACCAAACACCCTCTCTACGATTTCTTTAAATACCATTGCGAAGGGACTGT
CCCTCATATCACCACAGTCTTCGGGACTTTGACCACACCCAATAGTTTGG
GTAGCAAGCTTTACGGAATAGGAAGTGAAGGACTCGTCAAATTGGCCAAA
CAGAGTTATGATGAGAGAAATTATGAACACTCCACCTTCGACTTCTTCAT
TAGGGTATGTATTGTTTCCTACCTACTTTGGAGTCTCCTTGACACACAGG
AACACTACTTTGTTCGAGTAAAGGAAACTTTTAGATAGGGAACAAAGTTT
AATAGGCATTGTTAACTGAAGGGACAAGAAAACTTGTTCGAGTGAAGGAG
ACATTCGAGTTATAGAGGTTCGAGTTAAAGAGACTCGATTCTGTATACGT
AAACTTTATTTTTAGGAAAGTCTCGAGGTGTAATTTTTACCTTTATAACG
GTAATCGAAAAGAGGGGTAAATCACCGCACTCCATAGCATAGTGGGCTCA
TTGTGGATATATAGATATGGTTAACCCTAGAATATGCTATCGTCTAAGAC
AAATCACCATCTAAGAAATAAGCCCAAAGCCGAAGAAAATTCACAAACAG
GCTTTTTTGCTGAAAAGAGTTTACAACTGGTAGAGTTTGCCAGTCTTCGA
AACTCTCCCGCCGATTTTTTTCTGTATACCGCCATAACGCCAAACCGCCC
TATTTTCCCGCTTTTACTATCACTGTAACGAACGATAACAACGTCTAGGT
TAACCCTCGCCAACTTTCTTTTTGTTTTACCAGGGTCAAGGTTTAGACGA
TACTCGAATCAAGTATTACCCTTTCCGTGAAGACGCCATTACATTGATAG
GAGAGTTCAACATCTTCATTGAAAATCTTCTGAGGCGTTATTATGGATCA
AATTCTCATCGCGTCCGCGCGGACAAAGAATTGCAATCATGGGTGAACGA
ATTGTCCATTGATGGGAAAATTCAACCTGATGGCGGAAAAGGAAAGGTGA
GAGAGTGAAGTCATTTGAAATTTATCCCTAGTTTTTGACGTCTAAGAATT
AATTAGTCACAGAAGTGAACAATGAATCTGTCAATTGTTTTTAACTTTGG
ACTACATCACAGAAAAATAGGGAACTTTACCGAGAAAACTTAATTACTAC
TTACCACAAGTCCTGAAAATTGTTCTTTCGATTCAACGCTGGATGGTTTA
CCAGCAAATCAACTTGTGATCTCTAAAGACGAAAATTTATCTAATTTATC
TACCTTTATCTAATTCCCTTTTTAGGTCATTGCTTTCCCTTCATCTTTCC
GTTGGCGAAGTCAGTTAAAGACTTTCTTGCAACGTTTCATGTGGATGAAC
ATTTTTCACACGTCAGCAAATTATTACACACACCGAGATTTCCTACCAGC
TTCTCCAAGTAAATTTTACGAACTGAACAATGGAACACAGCTCCCTTATC
TTCAAGCACTCTCTGGAAAAGCATACAATGTTGTAAGTACCTTTTGTTGT
AGTTAATCTAAATGATAAACTTCTGGGCAACCATTTCTTTGGGATATTTG
TAATTACAACTTTCAGTCCTTTCTGCTACTAAAATTTTAGAAAAGAAACA
ACACAATTTTAATGATTTCGAAATTCAAACTCTGAGTGCCATAGTCGTTT
ATAATCCATCTAATACAGTAATATATGTGTCTTACATGATAATTACGATA
ATTGTTCCTGGATAAAACCGGTATCAGTTTGTCTTAACGACTACAATTTG
TTATTTTTTGCTTATTTCTCTTTACTATGTCTGAATTAGTCATCTAGCAT
ACTACATTATAAGTGCCCAACTACTCTGTACCAGAAAGCAAGTTCATGCA
TAAAGTAACTCACTCACGCTTATCGTTTCTACGGCAACGAATTTCGAAAT
TAGTCCGTAGATATCCGGTCTGTATTTAAACAAATACGATTTTTTTCTTA
TAGGAATATATGAGATTCGAAGGAATGTTGAACAACTTCCGAGTGAACAG
AATTTTCTCATACTGGAAAGACATCACAAACCCGACATACCGACGAATTG
TGCGCAAAGCTTTTTATCGTTTGAACANTCACAAACCCGACATACCGACG
AATTGTGCGCAAAGCTTTTTATCGCTTGAACACCATCGTCCAAAAGAAGT
TAGAAACAAGAAATGCTGAACGTAAAGCCAAAAATCAATTGGGTTATCAA
ATCATGGAACCAAAATGGCTGACAAATAGCATTCATATTTGAAATATATC
TAAAATATTTTTATCATCTTTATAAATGCTTACCCGGCAACCAAGCAAAT
CTTTGTCTTTAGTTTTGTGTAATTTATCATTTTTTGATTCTTGTTATTTT
TCCTAAATACTTCATCTGAAAAAATAGAAAATAAAACGTAAGTTAACTAC
ATCAGGAG

Coding sequence (CDS) from alignment at scaffold_77:204235..214742-

>TCONS_00072416 ID=TCONS_00072416|Name=TCONS_00072416|organism=Clytia hemisphaerica|type=CDS|length=1929bp|location=Sequence derived from alignment at scaffold_77:204235..214742- (Clytia hemisphaerica)
ATGCAGAGAATATTTTTGTTAGTGCTGGTCGTTGGATTGGCAGCTTGCCA
TGGAAGGTACAAAGGGGGCAAAGAGAGATGGAGAGAGACAGATGAACGCT
TATCATTCCAACTTCCAAACGAATGTAAAGTAGCTATTCATACCAGCGAT
GAAACATGTCAAAAGGATAGACTGACCGATATTGCGAGGGCTCGATATTG
GTACATACTTTCAGATGAAAACACCAACATTGATTTCCCTTTGGCTCATG
AAATCCCATGGTTGGCCCATAACTTAACGGCGGTTAATTACTATTACGCA
TTGGATCCATTCGAATCGCGATACATGGTACTTCTCAGCACCTGGTTTTC
TGCTGTTACCACCACAATTACGCCAGCCATAACCAAGGCTTTCGCAGGTT
TCTCTTTCGAGTCCAACCAAGAGTATGTTGCGTGTTATGGTGCTTTCCAG
AAGGCCATACAGGCGCTTCAAGCCCCGCAATACTTTGGCAATCCTGCAGA
GTATCCCGACTTTACGGATCACATCACCAATGGTTATTACCTGGAAGACA
ATGCGTTTGTTCAACGAAGACTTGCGGGACAATGTCCTTTCCTCATTCAA
AAAGTCATCACTGAGGGTGAGAGAGGGTTCAAGCTGGACGATTTAATGCC
TATGTTGAACCAAGACTTTTTCGAGACGTTCGAGATGAAATATTCCGATG
AAATGGTCACCATGGAAGAGGCCATCAATCATCACCGTCTGTTCGTCCTC
CATTTACCGAACATGAAGGACATCCAGAATGCACCGGACGCTCACGGTGA
TCTGTACACCGACCGTAAACTCTCTCCTCTCACTTCACCGATCTCATTCT
TTCTGTTGGGAGATGATGGTTTGTTGAGACTGGTGGCCATCCAAAGATAT
CCCAAATCATCTTCTGAAGTGTACACACCATCAAGTGAAAAGAACATCTG
GTCGTTGGTCAAAGGAGAAGCTGAGCTCGCATCTGACATGTACTGTCAAT
CAAAAATTCACTTAGGAGGCGTTCATTTCGTGTCCACCATCTATTGTTTG
TCCTTTAGAAGACATTTAAGCACCAAACACCCTCTCTACGATTTCTTTAA
ATACCATTGCGAAGGGACTGTCCCTCATATCACCACAGTCTTCGGGACTT
TGACCACACCCAATAGTTTGGGTAGCAAGCTTTACGGAATAGGAAGTGAA
GGACTCGTCAAATTGGCCAAACAGAGTTATGATGAGAGAAATTATGAACA
CTCCACCTTCGACTTCTTCATTAGGGGTCAAGGTTTAGACGATACTCGAA
TCAAGTATTACCCTTTCCGTGAAGACGCCATTACATTGATAGGAGAGTTC
AACATCTTCATTGAAAATCTTCTGAGGCGTTATTATGGATCAAATTCTCA
TCGCGTCCGCGCGGACAAAGAATTGCAATCATGGGTGAACGAATTGTCCA
TTGATGGGAAAATTCAACCTGATGGCGGAAAAGGAAAGGTCATTGCTTTC
CCTTCATCTTTCCGTTGGCGAAGTCAGTTAAAGACTTTCTTGCAACGTTT
CATGTGGATGAACATTTTTCACACGTCAGCAAATTATTACACACACCGAG
ATTTCCTACCAGCTTCTCCAAGTAAATTTTACGAACTGAACAATGGAACA
CAGCTCCCTTATCTTCAAGCACTCTCTGGAAAAGCATACAATGTTGAATA
TATGAGATTCGAAGGAATGTTGAACAACTTCCGAGTGAACAGAATTTTCT
CATACTGGAAAGACATCACAAACCCGACATACCGACGAATTGTGCGCAAA
GCTTTTTATCGTTTGAACACCATCGTCCAAAAGAAGTTAGAAACAAGAAA
TGCTGAACGTAAAGCCAAAAATCAATTGGGTTATCAAATCATGGAACCAA
AATGGCTGACAAATAGCATTCATATTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044955XLOC_044955Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072416-proteinTCONS_00072416-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072416-exon-scaffold_77-1575043694:214532..214742TCONS_00072416-exon-scaffold_77-1575043694:214532..214742Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:210052..210108TCONS_00072416-exon-scaffold_77-1575043694:210052..210108Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:208984..209324TCONS_00072416-exon-scaffold_77-1575043694:208984..209324Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:208182..208335TCONS_00072416-exon-scaffold_77-1575043694:208182..208335Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:207795..207898TCONS_00072416-exon-scaffold_77-1575043694:207795..207898Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:206960..207149TCONS_00072416-exon-scaffold_77-1575043694:206960..207149Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:206439..206803TCONS_00072416-exon-scaffold_77-1575043694:206439..206803Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:205647..205859TCONS_00072416-exon-scaffold_77-1575043694:205647..205859Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:205161..205367TCONS_00072416-exon-scaffold_77-1575043694:205161..205367Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:204567..204689TCONS_00072416-exon-scaffold_77-1575043694:204567..204689Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1575043694:204235..204511TCONS_00072416-exon-scaffold_77-1575043694:204235..204511Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:214532..214742TCONS_00072416-exon-scaffold_77-1510915933:214532..214742Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:210052..210108TCONS_00072416-exon-scaffold_77-1510915933:210052..210108Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:208984..209324TCONS_00072416-exon-scaffold_77-1510915933:208984..209324Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:208182..208335TCONS_00072416-exon-scaffold_77-1510915933:208182..208335Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:207795..207898TCONS_00072416-exon-scaffold_77-1510915933:207795..207898Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:206960..207149TCONS_00072416-exon-scaffold_77-1510915933:206960..207149Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:206439..206803TCONS_00072416-exon-scaffold_77-1510915933:206439..206803Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:205647..205859TCONS_00072416-exon-scaffold_77-1510915933:205647..205859Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:205161..205367TCONS_00072416-exon-scaffold_77-1510915933:205161..205367Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:204567..204689TCONS_00072416-exon-scaffold_77-1510915933:204567..204689Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1510915933:204235..204511TCONS_00072416-exon-scaffold_77-1510915933:204235..204511Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:214532..214742TCONS_00072416-exon-scaffold_77-1491911889:214532..214742Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:210052..210108TCONS_00072416-exon-scaffold_77-1491911889:210052..210108Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:208984..209324TCONS_00072416-exon-scaffold_77-1491911889:208984..209324Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:208182..208335TCONS_00072416-exon-scaffold_77-1491911889:208182..208335Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:207795..207898TCONS_00072416-exon-scaffold_77-1491911889:207795..207898Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:206960..207149TCONS_00072416-exon-scaffold_77-1491911889:206960..207149Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:206439..206803TCONS_00072416-exon-scaffold_77-1491911889:206439..206803Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:205647..205859TCONS_00072416-exon-scaffold_77-1491911889:205647..205859Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:205161..205367TCONS_00072416-exon-scaffold_77-1491911889:205161..205367Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:204567..204689TCONS_00072416-exon-scaffold_77-1491911889:204567..204689Clytia hemisphaericaexon
TCONS_00072416-exon-scaffold_77-1491911889:204235..204511TCONS_00072416-exon-scaffold_77-1491911889:204235..204511Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:204235..214742 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
507.126	527.62	255.777	191.619	28.4863	22.149	296.819	293.983	119.078	190.404	133.05	128.378	62.941	64.8342	9.87714	13.2228	68.4826	63.5314	55.8796	76.3233	12.5423	11.1002	103.965	95.4068	3.74314	4.21387	4.23552	7.20953	28.1497	38.6536
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072416 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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