TCONS_00072480 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072480
Unique NameTCONS_00072480
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1707

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072480 ID=TCONS_00072480|Name=TCONS_00072480|organism=Clytia hemisphaerica|type=transcript|length=1707bp
GCAAAAGTTGGTAATCTTTGTTGTATCTATCAGCATGTCTTAGAAAATGT
GGAAATTATTTTACATTTTGAGTGTTGTTTTCCACGATGTGGGCGCGCAA
GTCCTCAAATTTAAGAACGACAAATCATGCTCCACCAAGATGTCGTCCAA
GCTGCGAAGACACAGTATTTTGATCGCAAGCAAGATTTCATCCAACCAAG
CCAATATTGCTACATTGCGAGATTGTTTTACCGGCTGTTCGAATCACGCA
AATTGTGCAATGTTTGCACATCACGAAAAAAAGAAACGTTGTATGTTTTT
CAAAGAGATTTTGGTCAATGAAGTGCTTGCAAGACTCATTTTTGAAGGAT
GGAGTCCTGGTAGAATAAACGCACAACGGAAGATTTTACTAAATGTTGAA
GATACATGTTCTGAAGAGTATTGCCAAGATTCCTGTCTATCCGGGGTTAA
AGAGACTTGCACCCCGCCTACGTTAAGTCCACCAAACTGTGAACCAGAGG
GTGTTTACACTGGTTGCGATGATGCgcgaaaaaagtcaaaaatatccGCC
CTTTCTGTGGATGGAAACAGTGGTGCTCCGCCTTTCGACGAAGATGCCTA
CCGAGCCATGGTGATCGAAGGAATACCAGTCAGTTTGAAATGTCCACAAC
ATGTCGAGTATACCAGAATCGTCGGCGAACCATCAAACCCAATATGCTTT
AAATCACCAGAAAGACAAAACTACGGCATCGCTAGAAACTGGTTAAGTTA
TTGCACAACTAAAAGTCATTTATTCTCATATCATCGGATAACCGGAGAAT
TGAAAGTGGTTGGAACATCAAACTCTTATTTCGTTAAGATGGGAGCACGT
GATTATGAATATTGTCAGTATCCATTATTAAATTCGGGATGCTTCGGAAA
TTATTATCATTATGCGCAGAAGGTTCACTTGATGACGACCACCAGTTCTa
ctgaaagtttttttgagaGGACAGGATTCGGGTTATTCAAGGTAAAGCAA
GGTGCATATTCAGACGAGTACGTTGGAAAGAAGCTTCATCTGCATATGAT
TGATTATTTCATGGGTCCGAGTCTTGGTCCTTTTCCTGAAACATCCATCT
CGTCATACAACTTCACAAACATACcCGGTGCGGTAAAAGCAACATTATAT
GAGAATTACTATGGTACTCTTGCTGGGTTCGATAGAGACGCCCTAACGCC
AACACGATATGGGCGTTATGATAATTTTAAATCATTCAGTTATTTGGCGG
AGCACTACATCATCATATTACAAACATATTTCGTACCCCCGTCCACTGGA
TTATATCAATTCATCCTAGTTTCGGATGATGATTCATACCTCTATCTTTC
GACGGATGATTCGGCCAATAACAAATACAGGATCGTCCATAATCCAACCG
CGCTCGGAGATACAGATTACAGTAAGAAATCGAATCAAATTCAATTGGTT
AAAGGAGAAAAATATTATATGGAGCTTGTCGGCAGAGAAGGAGTGATTGG
CGATTATTTTATCGCAGGTGTTATTTTGCCGAACGGAGATCAAATTGTAC
CGATCACTTATCAGTATCTGGAGAGTTATTTTTAGCTTACTTTATAGAat
taatgggcttttccaaaaaaaaattgaatatggggcgaaaataaaaagat
aaagtgtttccggaatgcggatgaaggaaaaaagcactcatgcggccggc
cggaaaa
Run BLAST on NCBI

protein sequence of TCONS_00072480-protein

>TCONS_00072480-protein ID=TCONS_00072480-protein|Name=TCONS_00072480-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
MWKLFYILSVVFHDVGAQVLKFKNDKSCSTKMSSKLRRHSILIASKISSN
QANIATLRDCFTGCSNHANCAMFAHHEKKKRCMFFKEILVNEVLARLIFE
GWSPGRINAQRKILLNVEDTCSEEYCQDSCLSGVKETCTPPTLSPPNCEP
EGVYTGCDDARKKSKISALSVDGNSGAPPFDEDAYRAMVIEGIPVSLKCP
QHVEYTRIVGEPSNPICFKSPERQNYGIARNWLSYCTTKSHLFSYHRITG
ELKVVGTSNSYFVKMGARDYEYCQYPLLNSGCFGNYYHYAQKVHLMTTTS
STESFFERTGFGLFKVKQGAYSDEYVGKKLHLHMIDYFMGPSLGPFPETS
ISSYNFTNIPGAVKATLYENYYGTLAGFDRDALTPTRYGRYDNFKSFSYL
AEHYIIILQTYFVPPSTGLYQFILVSDDDSYLYLSTDDSANNKYRIVHNP
TALGDTDYSKKSNQIQLVKGEKYYMELVGREGVIGDYFIAGVILPNGDQI
VPITYQYLESYF
Run BLAST on NCBI

transcript from alignment at scaffold_78:75438..86805+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072480 ID=TCONS_00072480|Name=TCONS_00072480|organism=Clytia hemisphaerica|type=transcript|length=11368bp|location=Sequence derived from alignment at scaffold_78:75438..86805+ (Clytia hemisphaerica)
GCAAAAGTTGGTAATCTTTGTTGTATCTATCAGCATGTCTTAGAAAATGT
GGAAATTATTTTACATTTTGAGGTAAACAATCTACTTttatgggataaat
tttcgtggggataaaatttcgcgcaGTTGAGCTCATCcgagaaattttaa
gattttttcagcacttaatttggcggatggcattattgggagacaatatt
ttcacgaaatttgttTCTTTTACTGCTAAACTATACATTGTTGAAATACG
TATTATTAACGCTTCTTTGATGCTAGACTACTTTTGTCTACTTTTGactg
aactttttttttgataattttttataacgctgagtccagtaaagtagact
aggagcgtttggcgaggtcgccattttgagagaaaatgttaaaaatccaa
ataacaataaaactacttagatttgaaagatattatcaaaaatgagaaac
aaacattaataacagatttgcaatcccattgcttcatactgtttttacat
tttaaaacaatttaaatcTCGCCTAAGTAAAAGCATACTACCATATACTA
TCGGGCCACTTAAttgcgccatccagtctataaaaaaagctttaagtgga
ccccgggctacttTGATGCCAGTTAACTTTTTAAAAGTAGTTATTTGACG
TTTTTTCAGTTATTTGTTCAAAAAGATTTCGCTGATAAGACCTTACCAAA
TTTCCATtggaacttaatttcgcagatGACACCGAAATCCGTAAAATCTG
CTAAATTTAATTCCCGTGAAAATTATCAGGTTATTTGGATAAAAGATGTC
ATTAGCAAGGCTTTGGTGAGGCAAgataaaatttttagaaaattaattAT
GTCGAGAGACTTAAAGgctttgtttttacataagtgtccccgtttcatat
caggcacatatttcatatttgggacagtgtcttgctattgttatatcatg
ctgatataagcaaaacaatgtttttcttttcctttttctgaccaatcttg
ctccacattcttgtcaatccaatgtgaaattgcttgtaaattaaaattga
cgagtaagcaaacgatattacCCTTATTTAAAAAACGATATTacccttat
ttaaaaacaaaacgtttAAATATTCAATTCTAGTTTCTAGCGATTTTCct
aatcaaaattttgtttccTTTCTCGAATGACAGTGTTGTTTTCCACGATG
TGGGCGCGCAAGTCCTCAAATTTAAGAACGACAAATCATGCTCCACCAAG
ATGTCGTCCAAGCTGCGAAGACACAGTATTTTGATCGCAAGCAAGATTTC
ATCCAACCAAGCCAATATTGCTACATTGCGAGATTGTTTTACCGGCTGTT
CGAATCACGCAAATTGTGCAATGTTTGCACATCACGAAAAAAAGAAACGT
TGTATGTTTTTCAAAGAGATTTTGGTCAATGAAGTGCTTGCAAGACTCAT
TTTTGAAGGATGGAGTCCTGGTAGAATAAACGCACAACGGAAGGTAAACT
TTAACAAAATACCTCGTCTGCCCTACGTAAAATTTAGATTAAtagtgtaa
tacagtaatatggctGTTATATGATtatacgataattgttacgggataat
atcagtttgtttAAATTGTACAAAATTTGTCCTCTCCATAATGTGTTGCT
TACCTTTTTATtgtatgtctgaattagtctgAATTAGTCGTATAAGCATG
CTAGTCTACTTTATGGCATATAATTACACAAAAAATTCACTCTACCACAA
ACTGTGTCTCGTTTTCTAGATTTTACTAAATGTTGAAGATACATGTTCTG
AAGAGTATTGCCAAGATTCCTGTCTATCCGGGGTTAAAGAGACTTGCACC
CCGCCTACGTTAAGTCCACCAAACTGTGAACCAGAGGGTAAGAATAAAAT
TTTATTGtgaaattacatttttaaagCTGCGGACGATGGTTACTGTTTTT
GATTtcacgaagccttaaaatgttcttaacttgggcttaatattttggcc
atcgaagcctgatGTTCTTACATAGAAACAAAGAGTTTTCCGCATGGTTA
AACACCTCAGTCGGCAGAAAAATGAACTTATGAAGCCAAAGTTGTGAATT
TAATTCGATTCCTAACATTTTCCTCATTTTGTTATCAAAGTTTACGATAT
GCGGACCTGTTTACTTAAAAAATTTAAGTGAAAAAACTTTCGCCAACGAT
TGTATTATATTTGCGAAAATCATGTTAAGGGAAACGATTTTGGTGCGCAG
GAAAAAAACCTCCAAGAAATGTTTATTTGCGGCCCGAACTTTTCATGAAA
TGTCTCAGAAAAACTAAGAAAACTTTGGCAAGctaaaacatttttgtttt
taatcctATCTACCCCTAACAGAGGAACTTACATAGATCTCaggaaaatc
ataaaattcaCGATGtatcctttttttttcaatgatttctAGGTGTTTAC
ACTGGTTGCGATGATGCgcgaaaaaagtcaaaaatatccGCCCTTTCTGT
GGATGGAAACAGTGGTGCTCCGCCTTTCGACGAAGATGCCTACCGAGCCA
TGGTGATCGAAGGAATACCAGTCAGTTTGAAATGTCCACAACATGTCGGT
AAAAATCCTAGCtgtcacacaacgttgtttcaacgtttatttaacgttca
caacgtccatataacgttagataaacgttgaaagaacgttgtgtgccagg
tGAGAAAGTCAGAGAAGATACTACTTCAAATCTTAGAGGAAATTTAGCTA
AAAGTAATTTTGGGAATGTACCAATTTGAATCAGGACCGTGTTTTTCAGT
GGAAAAAAACTGCAGAAATTGAAAGGGGGTTTTTGCTAGAATTAAATTTA
GCCGTTGAAAAAGGACTGGAATTTCATATTCATACCAAGTTcattcttta
aagaaataatttaaTACATTTCCAGCAGGATGCTTTCTTTCTCAGAACAT
TGTTTCCGTGCGAAAAACGAAATTGTCTCTGAAATTTTAATTAAGTGTCG
TGCTGGCCCTAGGCGCTCAAGAAAGCGAACTTTTCTCCGTATCTTGAAac
attgaacccacgaccttgcGCACCCGTAGCTTGATGCGCTTCCTTCGAGC
TACTAATGGCCACTTAAAAAAGTCTTGATAAACATTTGCAGACTTCATCA
ACTTTTGCATTTCATTTGTTcctaaaatttttgtttttccaaccttatta
aaggttttgtttttaaataagagttatAACGTTtgtttactcatcaattt
taatttacaatctttttcacattggattgacccCGGGGGAAGGGGTTATG
GGAATgtaccgctggtcagggtaccttttttaacctccgcgagtcccagg
tagggtcgcaaaaacacctaaatagaaaaatcagtccgtagagtgccttt
tttggaaattctgtgaaaaaagtagaaaatttgagaaaattttggaattt
cagtcccattcagggtcactttttttcgCAAATTGCGGCAAAATCTTGCG
TCCCCcttagggtccatttttcgaacctcagcggagcacccccgtcggtc
ggcaaggatAGTACcccttgaaaaaaaagaaaagaaaaacatttctgGTT
TATATCAGcgtaatataacaataggcagacactgtcccgatatgaaatat
gtgtttgatatgaaacgggaacacttatgtaaaaataaaacctttaaaac
gttaaaatttgtattttcttattcaaaatttattcttcttttaaaactat
tcatgatattcatgacgtaatgttttatatggaagcacccaaaatagcCC
GGGCGTTTGTCactaattgttttttgaaaaaaaatcagtggtAAACACCC
GGGCTATTCCAGGTGCTTCCGTATGAAACATTTCgtcataaatatcatga
atttattACTTCAATAACCTTAGGtaatcaatttaatttgttgctCTACG
GGCGCGACTGACCCAGCATTTGctgcaaacgaaaaaataattaatatcAA
ATTTCCTATGCCACAAATTTATAATATTAGtcatcatttaaaaaattcac
acttaaaaaaagtttaaaagataATCTAGAATCATGAATTCTATGCACGA
gagattttattacaaactccatcaaagatgaatgatgaattttcgaccaa
gattatttgaaaatattacttaaagCCTAATTACCttccttgattaatga
aaatcttaTCTTTATTTTACCGACCAACTGATTCATATTTTGcgaacgat
ctgcccgtagaacaatagcgagcacctcactaaaaaccgggatttttcat
ctcgtttcttagtgagttccactctGACGACTTTTGAAAATTagaagtgt
tttgacgcaaattcgatttctcccttcaaaagtttaaagtgacgtcaaaa
aatcgaatgtttagagcccgaaaacctgggctcaaaacattcgaaaaagt
cacaaagtggaatagacgttaattgcgtaaaaaaaacgcaggtgacgtct
agtagaacaacaaattaaattggtctcgccttacatTTACAGAGTATACC
AGAATCGTCGGCGAACCATCAAACCCAATATGCTTTAAATCACCAGAAAG
ACAAAACTACGGCATCGCTAGAAACTGGTTAAGTTATTGCACAACTAAAA
GTCATTTATTCTCATATCATCGGATAACCGGAGAATTGAAAGTGGTTGGA
ACATCAAACTCTTATTTCGTTAAGATGGGAGCACGTGATTATGAATATTG
TCAGTATCCATTATTAAATTCGGGATGCTTCGGAAATTATTATCATTATG
CGCAGAAGGTTCACTTGATGACGACCACCAGTTCTactgaaagttttttt
gagaGGACAGGATGTAAGTTGCTCTTCTATAAAACTAAATAATTCCCATG
ttttctacagggtgtcccataAAAAGTCCTGTTTCAGTACACCAAGTAAC
AGTTTCGACGTGTGTatactcgggtaagttatggcatgttttaaaatgac
cataatttttagaacgcatgactgaacatgaagagtactatgatgaagtt
tctaacctgatgtgcaacctaattgttttttcgctgattttcgcgaaaaa
ccgcgtATAATCGTCATAAtcgacgtcataatcgatgacgtcataaaaac
tttgaatttcccaaggaaaattttttttcgaaattctgattacgtcagca
aaaaataagatttttcgtTTATAACTAATTTCTGCTGgcatcatcaaaat
ttcgaagaaaaaaaatttttaatttcaaatgatcgactttagtgagatac
atctatggtgaaagtttgaagacaattggataaacaatccttgagaaatt
caatttttagctttcatgacgtcatcgattatgacgtcatagtcagtttt
tgcggtttttatCGACAATTAAGTTAAACACATCAgattagaaactacat
catagtacccttcatgtttagtcatttgtttggtcattttctgtcgacta
atgcgatctaaaaattatggtaattttaagacatgccataactaaCCCga
gtatgtcaaaaattagaaTTAGCGTGAAAAATGCGATCATTAACGGCTAT
TCGTAGTTTCTTGCCGGGATTAAAgtgtaacacccctgtctcacagcccc
gagtGAACCTTTTCTCTCAATGGAgacatgaaaatttctatcgaaatccc
aatggggatagaaagtCTCATTGTACAAAGGTAAAAAATGGTTATCATGT
AATCTTCACTCCCACTTGGTGCTAGGTATGTGTGGACGGTAGGGGTCGgc
tttttcacctttcaaagtctctctaaaggtcgcaaaaatcagaaaaattt
aaattagtctctctaaggttcggaaaattcacgatttttaggaatttagg
aattttttaaaactcgaagaaaatttttcaaaaaagtctctctaagaggg
tcaccttttcagcaaaaatcagtctctcgaAGGGTCTgtttttggaggtc
ccatcTGCACATGCCCCTCACctgccaaccctagtaccccccccccNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCCCCGGGTCTTCAC
CACTTAATTTCGAATGGGAATAAAATCGTAGGGCAATTTTCCAGTGAGAT
TGAAGTTTTAGGGTACTGAGGACGATTTTTGGCCGATTTTTGCAGTGGAG
CTTTTCGAAAGTTTCCCACCTGGGACAGAGGGTACTTTTATTCCAGATTT
CAGTCTACTAGACGCACGAGAGcactcaggcaaattaaggcatgtccaaa
tttaccttaattttttatcaccgtttccacttgtcatagcatatcacttc
atacatcgaaagaagcgtattggtgtgtagatcactggaatagctgtgcc
ataattaattttttcacccaaaaaaatatatcaggcaaaaaccaaaaaat
gctgacgtcagcaaaacttgttttttgaataactccagtttggcttatgg
tataaacatgaaatttggacaaaagttgcatatcattaataggaacattt
ttgcataattttttttcaaaattttgctgacgtcagtagaaatcagcaaa
atacgaacgaaattttgcaataaagtgctgacgtcagcaaaatttcaaat
ggtgtgcaactttggtccaaatttcatgttttttgaataactccagttat
TGTAAAAACTATTGTTAGtatggtaaaaacatgaaatttggaccaaagtt
ttGCTGACGAAAGCATTTTTTGGTAgatatgacaagtggaaacggtgata
aaaaaattaaagtaaatttgaaaaatctggacaggccttaatttgcctga
gcaGTCTAACACTAAAGTGGACTGAAGtatggattttatggttaacAGTT
TATAAATTTGCACAAATTCATCTTTTATTCATTAGTCGGGTTATTCAAGG
TAAAGCAAGGTGCATATTCAGACGAGTACGTTGGAAAGAAGCTTCATCTG
CATATGATTGATTATTTCATGGGTCCGAGTCTTGGTCCTTTTCCTGAAAC
ATCCATCTCGTCATACAACTTCACAAACATACGTGAGTAACAAACTTTAT
TAAAAGGTTTATCATTGTTTTTGGTATgctggcgaatgaaaaattaactc
tggcGAATTCTACTTTAAGTAGATACCTTATTACCGGGGAAAAAAGGTCG
GGGTTTTAATTGgtcgggaaaaatttcgtcggggaaaaatttcgtcacct
agaggcattttcgtcacttttccccgacattCTTTTCTCTCTAgcagttc
ctttgtttttgaggaatgcattttttgaaatctagagaTGTAAAAACAAC
GTGTGGGCGttctgaatgggaaataagtggcttcgtttctcatccaggag
tctcgagtctagcccttcaggcttgcAAGTCAATGGCGAATCGCCCCCTT
TTtcacctaatttctttcattttactaagggtttttataagaataaatgg
TTTtcggttttaaaaattttcggaaaaactcgcgaaatataatccttGCG
AAAATTAATCTCCACTTAAAAGGTAGAGGCTTACCAAGCCATTGATTAAC
ATTAATCTGCACTTGACCGATGAATCATAACTTATTTTTTCGTGCTTTAG
ATCAGcgaaatttgttaaaaataagATGCCTGAATTTGTTACACTCTCTT
AGTATCATTAGGTTTAACTTGAAAATAATCCCTATTTGAGCTAGACTGCC
AGTATCCATCTAATATGTTTTTACCTTaccgaagaaaaaaaatgtcgtGT
TTTAATTAGTCGGGAAaatatttcgtcggggaaaaatttcgtcacctaga
ggcattttcgtcacttttccccgaccaaaatttcaaatttgtcacttttg
cccgaccaaatttacaatttagtcacttccacccgactaaattgtccaaa
tgaaatggtttccttcactagctcgaaaatagatcttgtaattcgacgtt
TAAAGCACTAATTTCGGTTAATAGGAAAGTAGAAAATTTGGTTTTGAATT
TTGGTGGGGGGGGGGGATCGAGTAAAAGTTTTGGAaggggataaaaaaat
ttggttaacgttttggtcgggtgataaaatgtcgggtataaatttcgtcg
gggaaaaaattcgtcaccccctcaaaattttcttcactttcccccgacat
ttttttccccgataaggtatacaaCATTGAAGCTTCACCAATATAGGCAA
TGTCATATCGTCCTTTCTTTcaagcgtaaaactcctactctttgGGATAT
GCGCACTGcacttgttttgaatattgaatttcccCGGATACATTGCATGC
GCacaaaggcctaaaagcctggatttGTCTTTTGTGTAGACTACACAAAT
AATATGACtattttaaacttaaaaatgtCTTGTTGTTTTTTACATACAGT
TAACGCTTTCTAGTTCGACGTTCTACTTTTCGAtatgctccattattcga
taatattgaaagtcaccacCAACAAGTAACTTTCATAAAgaacaattcaa
aaacttcATTACTCgatgaaaattaatttcaggtttcGAGGTTTAAGAGA
GCTTCAACTGTATTTTAAAAGGTAAAACAGACATttgaattattgaaaat
aaaaaaaacgttgtttaaaatttctttttatagcCGGTGCGGTAAAAGCA
ACATTATATGAGAATTACTATGGTACTCTTGCTGGGTTCGATAGAGACGC
CCTAACGCCAACACGATATGGGCGTTATGATAATTTTAAATCATTCAGTT
ATTTGGCGGAGCACTACATCATCATATTACAAACATATTTCGTACCCCCG
TCCACTGGATTATATCAATTCATCCTAGTTTCGGATGATGATTCATACCT
CTATCTTTCGACGGATGATTCGGCCAATAACAAATACAGGATCGTCCATA
ATCCAACCGCGCTCGGAGATACAGATTACAGGTTGGTATTGAAGAAAACA
TTTGTTTGTCTTCTTACGAGGGCCACGAAGCTTTTGATTTTGCAAATACT
GAAAAATTTGTGTCCTGATTTCCGAAATCACGTTAAAATCATTCCATGAT
TtcacaattttagcgatttaCCTTTTTCGGCTTGGTTTCTACAATCtagc
ggtaactctgatcacgattagatatcacgcaattttttgtcttcaatcac
gatctcgtaaaacagcaaaaaaacttAGATAGTCACGCATCTCTTTGAAA
AAGTCCGAATCGCGCATCACGGCTCACAAATCTTTGAAATCAcaatcacg
ttttgacctctgatcacaCAATCACGACTCGAGTGACTTAGtgcaagtct
caaaaacctagcagtttaccctaagttttcgcgACCAATAacagccagat
tcagagatccacttacggctctaaagtacctctataccttGAAGTTTATG
AATCAGGTTGTGACCTAATTAAATATCAttccaaaaatctaaaattaaag
aaattgtaatattttgctgacgtcatcaaaattttcaaaaaatttagtat
tAGAGAGTAGTATGAGAAATAGGATGATTTTTTCTCTGGTGTGGTGCACT
GCTCGTGCTCTTATGTCTCATCTTGTAGGAGGCCCCctaagcggttttcg
tgatgtcGTGATAAGGACTTTTTCCTAGCGTGATTACATGATTTGGAAAT
CTTTTCTTCCGGGTGAGTTAGGGCGttgcctgtaccagacgaccacggct
ttttcctcgacgACGTGATAAAAAAATTGCGTGTTGCGATAGAGATAGGC
Tagttagggcgtgtctagatttttaaaaatcacaaatcccgaatccgcga
ccaatagcacccattctcagggattcacttatggatttttagatgaccta
taccttaagtttcaggacccggttgtgacgtaattaaatattaaactaaa
aattaattattaaagaaagtgtgaattaTGCATGAGGTCAtcgaattatg
acgtcataaatcgtaaaatagctctaactctataagtacatgtcgaatct
ttgtcaattttggaccaaagatgcatcttaaTAGTGGCGagcttttcaaa
gaattttttttttgaaaattttcatgacgtcagcaaataatgcaaaaaat
ggaaaaatgcaattttttgctgacgtcatcaaattctttaaatttttttt
tcttttcaaaaagttacatttcagttagatgcatctttggttcaaatttg
gaaaatattggACATGCATTTTTAATATCATAGNttagatgcatctttgg
ttcaaatttggaaaatattggacatgtatttttaatattataaCGATTAT
ACTattcatgacgtcaccaaatttgatcaaattatgacgtcatgattaca
gTTTCTTTTATTATAGATTTTTGGGGTGATATTTAATTAGGTCACAACCT
GATTCAGAAACTTTAAGTTTAACTTTAACTTTAAGGTATAGATgtacttt
agagccctaagtgcatctctgaatctggctgctattgATCGCAATCCTTC
AAAAAAAACTATTGCtatttagtctgaatcgcagacctctacaaaacccc
aggtagtatataaggagcacgaattcGCTAGttgatgccagcagcctagc
tATTGGCATCTCTTGTGAGGCCCCCCAAGCGGTACACGTGATGGCGTAAT
AGGGACCTTTTTCTTGCGTggttacgtgatttggaaatttcatcTTCGTG
ATAGCGTGATCATAGAGGTCAAAGCGTacgatttgaaagatttttgagcc
gtgatgcgtggtttggactttttcaaagggatgcatGTTTATCCAAATTT
TCGAGATCGTGAGTGAAGACAAAATTTTACATGATATTGTGACCAGACTT
ACCGCTGTTAATCGTTAACCTTGCTAGCTTGAAAGCTTGAACTACCCtct
tattttttcctcaaatttggGCTTGGATTACCCTCTATCCAAAACCTTTT
CTacttaatttcaattttcttctttttaaataGTAAGAAATCGAATCAAA
TTCAATTGGTTAAAGGAGAAAAATATTATATGGAGCTTGTCGGCAGAGAA
GGAGTGATTGGCGATTATTTTATCGCAGGTGTTATTTTGCCGAACGGAGA
TCAAATTGTACCGATCACTTATCAGTATCTGGAGAGTTATTTTTAGCTTA
CTTTATAGAattaatgggcttttccaaaaaaaaattgaatatggggcgaa
aataaaaagataaagtgtttccggaatgcggatgaaggaaaaaagcactc
atgcggccggccggaaaa

Coding sequence (CDS) from alignment at scaffold_78:75438..86805+

>TCONS_00072480 ID=TCONS_00072480|Name=TCONS_00072480|organism=Clytia hemisphaerica|type=CDS|length=1539bp|location=Sequence derived from alignment at scaffold_78:75438..86805+ (Clytia hemisphaerica)
ATGTGGAAATTATTTTACATTTTGAGTGTTGTTTTCCACGATGTGGGCGC
GCAAGTCCTCAAATTTAAGAACGACAAATCATGCTCCACCAAGATGTCGT
CCAAGCTGCGAAGACACAGTATTTTGATCGCAAGCAAGATTTCATCCAAC
CAAGCCAATATTGCTACATTGCGAGATTGTTTTACCGGCTGTTCGAATCA
CGCAAATTGTGCAATGTTTGCACATCACGAAAAAAAGAAACGTTGTATGT
TTTTCAAAGAGATTTTGGTCAATGAAGTGCTTGCAAGACTCATTTTTGAA
GGATGGAGTCCTGGTAGAATAAACGCACAACGGAAGATTTTACTAAATGT
TGAAGATACATGTTCTGAAGAGTATTGCCAAGATTCCTGTCTATCCGGGG
TTAAAGAGACTTGCACCCCGCCTACGTTAAGTCCACCAAACTGTGAACCA
GAGGGTGTTTACACTGGTTGCGATGATGCgcgaaaaaagtcaaaaatatc
cGCCCTTTCTGTGGATGGAAACAGTGGTGCTCCGCCTTTCGACGAAGATG
CCTACCGAGCCATGGTGATCGAAGGAATACCAGTCAGTTTGAAATGTCCA
CAACATGTCGAGTATACCAGAATCGTCGGCGAACCATCAAACCCAATATG
CTTTAAATCACCAGAAAGACAAAACTACGGCATCGCTAGAAACTGGTTAA
GTTATTGCACAACTAAAAGTCATTTATTCTCATATCATCGGATAACCGGA
GAATTGAAAGTGGTTGGAACATCAAACTCTTATTTCGTTAAGATGGGAGC
ACGTGATTATGAATATTGTCAGTATCCATTATTAAATTCGGGATGCTTCG
GAAATTATTATCATTATGCGCAGAAGGTTCACTTGATGACGACCACCAGT
TCTactgaaagtttttttgagaGGACAGGATTCGGGTTATTCAAGGTAAA
GCAAGGTGCATATTCAGACGAGTACGTTGGAAAGAAGCTTCATCTGCATA
TGATTGATTATTTCATGGGTCCGAGTCTTGGTCCTTTTCCTGAAACATCC
ATCTCGTCATACAACTTCACAAACATACcCGGTGCGGTAAAAGCAACATT
ATATGAGAATTACTATGGTACTCTTGCTGGGTTCGATAGAGACGCCCTAA
CGCCAACACGATATGGGCGTTATGATAATTTTAAATCATTCAGTTATTTG
GCGGAGCACTACATCATCATATTACAAACATATTTCGTACCCCCGTCCAC
TGGATTATATCAATTCATCCTAGTTTCGGATGATGATTCATACCTCTATC
TTTCGACGGATGATTCGGCCAATAACAAATACAGGATCGTCCATAATCCA
ACCGCGCTCGGAGATACAGATTACAGTAAGAAATCGAATCAAATTCAATT
GGTTAAAGGAGAAAAATATTATATGGAGCTTGTCGGCAGAGAAGGAGTGA
TTGGCGATTATTTTATCGCAGGTGTTATTTTGCCGAACGGAGATCAAATT
GTACCGATCACTTATCAGTATCTGGAGAGTTATTTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044983XLOC_044983Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072480-exon-scaffold_78-1491911889:75438..75509TCONS_00072480-exon-scaffold_78-1491911889:75438..75509Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:75438..75509TCONS_00072480-exon-scaffold_78-1510915933:75438..75509Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:75438..75509TCONS_00072480-exon-scaffold_78-1575043694:75438..75509Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1491911889:76621..76930TCONS_00072480-exon-scaffold_78-1491911889:76621..76930Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:76621..76930TCONS_00072480-exon-scaffold_78-1510915933:76621..76930Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:76621..76930TCONS_00072480-exon-scaffold_78-1575043694:76621..76930Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1491911889:77207..77324TCONS_00072480-exon-scaffold_78-1491911889:77207..77324Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:77207..77324TCONS_00072480-exon-scaffold_78-1510915933:77207..77324Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:77207..77324TCONS_00072480-exon-scaffold_78-1575043694:77207..77324Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1491911889:77880..78035TCONS_00072480-exon-scaffold_78-1491911889:77880..78035Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:77880..78035TCONS_00072480-exon-scaffold_78-1510915933:77880..78035Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:77880..78035TCONS_00072480-exon-scaffold_78-1575043694:77880..78035Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1491911889:79980..80300TCONS_00072480-exon-scaffold_78-1491911889:79980..80300Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:79980..80300TCONS_00072480-exon-scaffold_78-1510915933:79980..80300Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:79980..80300TCONS_00072480-exon-scaffold_78-1575043694:79980..80300Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1491911889:82423..82569TCONS_00072480-exon-scaffold_78-1491911889:82423..82569Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:82423..82569TCONS_00072480-exon-scaffold_78-1510915933:82423..82569Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:82423..82569TCONS_00072480-exon-scaffold_78-1575043694:82423..82569Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1491911889:84171..84468TCONS_00072480-exon-scaffold_78-1491911889:84171..84468Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:84171..84468TCONS_00072480-exon-scaffold_78-1510915933:84171..84468Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:84171..84468TCONS_00072480-exon-scaffold_78-1575043694:84171..84468Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1491911889:86521..86805TCONS_00072480-exon-scaffold_78-1491911889:86521..86805Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1510915933:86521..86805TCONS_00072480-exon-scaffold_78-1510915933:86521..86805Clytia hemisphaericaexon
TCONS_00072480-exon-scaffold_78-1575043694:86521..86805TCONS_00072480-exon-scaffold_78-1575043694:86521..86805Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072480-proteinTCONS_00072480-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_78supercontigscaffold_78:75438..86805 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.693387	0.547924	0.334936	0.707273	0.371384	0.49147	0.743828	0.362779	7.15099	6.58071	2.6224	2.93862	2.34683	2.34369	9.53394	8.18671	1.09913	1.20626	0.336879	0.535975	0.0788631	0	0.402874	0.31192	0.0788602	0.455294
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR011658PA14_dom
IPR008979Galactose-bd-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072480 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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