TCONS_00072561 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072561
Unique NameTCONS_00072561
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4903

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072561 ID=TCONS_00072561|Name=TCONS_00072561|organism=Clytia hemisphaerica|type=transcript|length=4903bp
ATCAATACTGAAGGTGAAGAGGAATTGATTTTCCCAGAAGAATCGTCAAC
AATTGTAACCGATGATAGAATTACCGATCACATTACTAAAACAACAAAAG
GTTTCTTTTGTCCTTACTGTAACAAGAAACTAAGCAGCAAAGCTAATCGC
ACATATCACATGCGGATATGCTCAAACAAAGATCAAACTGGTGCGGGTAA
TAGTAATATCAATGACGAGGACCAGACTGCAGCTATCAACGAAACTGTGT
ATGATGGTGATGAAGCCAATAACAACAACATCAGGTTGGTGCAGACATCC
ATGAACCGCATGGTAAAAATCTACCGAAGAAAGATGCAAGCAAACAGAGG
GAACATCATTCCAACAATTGCAGATTTTAGAGAATTCCTTGATGTTATTC
GCTCTAATGATTCCATCAAATTCTATTTTTCCGTCAAACTCCTTTACCAT
CAGGCCAAGGATCCAAGCCATATCACCGACCCTCCTGTCATCCACACCTC
AGATGTCTACATGTTTCTAGTCGATGATACGATGATACCAGAACAAATAG
AAACAGCACTAAAGAGAATAGTAGACAAGATAGAAGCCTACGAGCGAAAT
GGTAGCGGATGGGTTGTTGATCAATTGCTCTCTATTGATTTAGCTGCTGT
TAAATATGATCCACTAAATGCATCATCATACATTCCCTTACCAAAATTCG
TGTCATCGAAAAACGCATGTCTAAACGTTGACAACACAGATGAAAGATGT
TTTATGTGGGCCATCCTAGCTGCTCTATACTCCTGTGAGAGGAATAGTCA
GAGGCATACCCATTATCGTAAGCATGTGAGTAAGTTGAACTTCAAGGGAA
TCCCCTTCCCTGTCTTGATCAAAGATGTACCCAAATTTGAAACCCAGAAC
AACATTTCGGTGAACGTGATTGGATATGAAGATGAGACCTTCTTCCCTCT
GTTCGTGAGCAGTAACATCGAAGATGGAAAGAAACACGTCAACTTGCTGT
ACTTCTCCAACGGTGAAGGATCAACTCATTACGCATGGATTAAAGACTTA
TCTAAACTATTAACTAACCAACTTTCAAACCACGACGGCCGAAAGTATTT
TTGTATGTATTGCTTGCATGGTTTTGAGAAAAGCTCGGGGCAAATAGAAC
acacaaagatttgtaaacaacaTGGCGTGCAGGCTGTGTCTTATCCAAAG
AACAATGGTATTGACGATGTAATTTCATTCACTAAAATCGAGCATCAACT
GAAACTACCTTTCACAATCTATGCTGACTTCGAATGCTTCCTTGAGAAGA
TGACAGGGGAAGATGattttaacaagaaaacaaagaagagCAACATCCAC
AAACCGAGCGGATTCGCTTTACACATTGTTAGCTCAGACCCGCGATTCTA
TAAAGAACCGTTTGTTTACTTCGGAGAAGACGCAGCGGAAAAGTTTTTGG
ACAAATTGATGGAGGAAGTGGCTAGTCTTAGAAAGATCTTAGCAAGAAAG
ATCCCAATGGAAGAGTTGAGCAGCAGTCAGaagaaaaaacacaaagaaac
caaaacttgctacatttgtggtaaaCCATTCCCAAAAGGGTGGACCTTCG
ATCGAAATCAAATCAAAGTCCGCGACCATAACCATGTCACAGGAAAATAC
AGGGGCCCAGCACATTCGATATGCAACCTACAGCTAAGAATAAATCCGAA
AAAGATTAAAATTCCTGTCATCTGTCATAATCTTAAAGGTTATGATAGTC
ACTTAATATTATCTGCAATAAAGCCAGAGCATGGAAAGACATTCTGTATC
CCGCAATCAAGTGAGAAATACATTGGCTTTTCAATCGGAAACATCACATT
CATTGATTCGTTCCAATTCATGCCTTCGTCAATGGCTAAGCTCGCTTCGA
ATCTCGCAAAAGATCAGTTCCATCAAGTCATTCGGTATCTGAAGTCAACA
ACCTCGTACAACGACGATAACAGTATGAATGTGGATGGAAACGATACCAG
TGGTGACTACAGAGATCATAGGTGTTATGAAGAACCCAACCTCTCCCCTC
GACAAATGAATGAAGTTGAAGAGCGCTTCATCCTTTTGACTAGAAAAGGT
ATATATCCTTACGAATACTTCGATGACATCACGAGGTTTGATGAAAATGA
ACTTCCACCAAGAGAATCCTTCTACAGCACACTTTCAGAAGAGAATGTGA
GCGAAGAAGATTACAATCATGCGAAAAATGTATGGAACAAGTTCGAGATG
GAAAGCCTGAAGGACTATCATAACTTGTATGTGTTGACAGATGTGNATGA
CGGTGATTATATTTATTGTTAACATTTATCTAGATGGGAAGCCTAAAGGA
CTATCATAACTTGATCATGGCTGATGTCTTCGAAGCCTTCCGTAAAAACT
GTTTACAGCATTACCAACTAGATCCAGCTCACTATTTCACAGCTCCAGGG
ATGTCATGGGAAGCAGCTTTGAAAAAGACAGGTATCAGTTTGCAACTACT
TACCGACCCTGACCAATATCTTTTCGTGGAGAAAGGAATCAAAGGTGGCA
TATCGATGATAACACAACGTTATGCGAAAGCAAATCTTGAAGATCTTCCG
AACTACGACCCGACAATAAAAGATACACATTTGGTTTATCTCGACGCCAA
CAACCTTTATGGTTGGGCAATGTCCCAATCATTACCCATAGGAAATTTTC
AATGGTTAAAGGATGACGAGATTGAACAATTCGATGTTAGCACAATTTCA
GATGAGGCAGAAGATGGTTTCATCATCGAGTGTGATTTAGATTATCCTGC
CATCTTACACGATGCACACTCTGAATATCCACTGGCGCCAGAACGAATGG
AAGTTGCAGAAGACATGCTTTcaccaaaacaaaaagaaattttaagaaaa
gagAACACCGAATTCAAAAGTTATCCTAAACTCGTACCAAATCTTTTCGA
TAAAAGAAAGTATGTTCTCCACTACCGTAACCTCAAGTGCTATCTATCAT
TGGGTATGGAATTGAAATcgatttccAGAATCCTCACATTCAAGCAATCC
AAGTGGTTGAAGCCATACATCGAGTACAATACAATTCAAAGAAGTCGATC
GACCAATGATTTTGAGAAAGACTTCTTTAAGTTAATGAATAACTCAATGT
TTGGGAAGACCATggaaaatatgagaaaaagacGGAAAGTCGATCTTGTT
ACAGCACCGAACTCGTTGAGAAGATTTGTAGCTCAACCATCATTTAAAAA
GCTACACATTTTCCATGAAAACTTAGTGGGCGTGGAACGGAttcagcaaa
atattttattgaacAAACCAATATACATTGGATTCACAGTGTTAGATCTA
AGCAAGATCCTCATGTATGATTTTCATTATAAGTACATAAAGCAACGTTT
TCCAGAAGAAAAATCTCGATTATTGTTCACTGATACGGATAGTTTGTGCT
ACGCGATCCGAGATCAAAATATGTACCAAGTGTTTTCTGACGATCGTGAC
CTCTTCGATTTCAGTAATTATCCTGACTCACATATGTGTTATGATCTTAC
GAACAAGAAGGTCATTGGCAAGTTTAAAGATGAGTTAGGAGGTGACAACT
TGAGGGAGTTCATCGGTCTCAAGGCAAAAATGTACTCGATGTACTATCAT
ACATATGACAAGAAGCAGAAAAAAGTCATCCCTATCGAATCAAAGAAGGC
AAAAGGTGTTAAAAAGATCACTTTGAAAAATAGAGTGACACACGATGATT
ACAAATCTACATTGATGGATATGTCAACCGTATCCACAACATTTAATTCG
ATCCGAAGTTTCAAGCACGTTCTCTATACCAtcgaacaaaataaaaaaag
tctatCACCGTTCGATGACAAGCGCTACATTTTAGATGATGGTATTCATA
CTCTAGCCCATGGACACTACTCATTGAGGAATTAATCCGAACATATTTTT
ATTGATCTTTTGTACTTTTTatattcattttattcatcaTTTTTAAATAG
ATGTAAATATAAATTTAAGAATCTAAAAAGTTTACAATCCTACTCTTTAA
ACCTTTAACCCAATAATCATCTACTAAAAGTTCAGATTTACTAAATATGA
CTTCGCCATTCATGTTCATAGCTTTGTTACAATTTCTATTTGCTTCCTCT
TCGTCTACATGTTTAAGGAGATTCGAGAATGCGTCTTCAACGAATCGTTC
TGCTTCAGTTGTAAGACAGTAATGGTGAATTTGACTTGGATAACCTTCTA
AACACCCTTCGCACATCTCCCTTCGCAcgttgaaaactttttcacgAATT
AATAGAAAATATACACTTTGCATTTCTTCTTTGTATCTCTTTCGATTGTA
TTCAGTCAAACGTTTCGAAACATTATCGATTAAAACTTCTGCTTTGCCAG
GTGTTAGTATGATAAAGGAGTTTGATTGCTGTCCAATGAATTTTTGTTCG
ATTATGATGAACTCGTCTCCATCTTGATCGAAGTAGGTTTCAACACCGAA
ACTGAGACTACGATTATCCTTCCATTTTGAAATTCTAGTCTCAAAGCATT
TCTTCTTTTTCGGAGCAGCTGGACAGCGGTTTAGcacttcatttcttttt
tgaatcGGCGTTGATGCTTCCATTGCTTACTTGATTAATGTAATGAGAGT
GCGAAGAAAATGAAACCCAAAGCGTAAAGAAAACCACGAGATGTGAACCA
AGTATTCCAGAGCTTAGAACAAATTCGAATGAAGCTCATTCTCTCCTtac
tcaaataaaaataataataacatgtTAATATAAACATTGCTATATATATC
AAACCTTTCACATGGTGTTATTGTCAACGAtgtactcactttctgtagtg
tcactcactttctgtagtgtcactcactttctgtagtgtcactcactttc
ggc
Run BLAST on NCBI

protein sequence of TCONS_00072561-protein

>TCONS_00072561-protein ID=TCONS_00072561-protein|Name=TCONS_00072561-protein|organism=Clytia hemisphaerica|type=polypeptide|length=773bp
INTEGEEELIFPEESSTIVTDDRITDHITKTTKGFFCPYCNKKLSSKANR
TYHMRICSNKDQTGAGNSNINDEDQTAAINETVYDGDEANNNNIRLVQTS
MNRMVKIYRRKMQANRGNIIPTIADFREFLDVIRSNDSIKFYFSVKLLYH
QAKDPSHITDPPVIHTSDVYMFLVDDTMIPEQIETALKRIVDKIEAYERN
GSGWVVDQLLSIDLAAVKYDPLNASSYIPLPKFVSSKNACLNVDNTDERC
FMWAILAALYSCERNSQRHTHYRKHVSKLNFKGIPFPVLIKDVPKFETQN
NISVNVIGYEDETFFPLFVSSNIEDGKKHVNLLYFSNGEGSTHYAWIKDL
SKLLTNQLSNHDGRKYFCMYCLHGFEKSSGQIEHTKICKQHGVQAVSYPK
NNGIDDVISFTKIEHQLKLPFTIYADFECFLEKMTGEDDFNKKTKKSNIH
KPSGFALHIVSSDPRFYKEPFVYFGEDAAEKFLDKLMEEVASLRKILARK
IPMEELSSSQKKKHKETKTCYICGKPFPKGWTFDRNQIKVRDHNHVTGKY
RGPAHSICNLQLRINPKKIKIPVICHNLKGYDSHLILSAIKPEHGKTFCI
PQSSEKYIGFSIGNITFIDSFQFMPSSMAKLASNLAKDQFHQVIRYLKST
TSYNDDNSMNVDGNDTSGDYRDHRCYEEPNLSPRQMNEVEERFILLTRKG
IYPYEYFDDITRFDENELPPRESFYSTLSEENVSEEDYNHAKNVWNKFEM
ESLKDYHNLYVLTDVXDGDYIYC
Run BLAST on NCBI

transcript from alignment at scaffold_8:256752..262683-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072561 ID=TCONS_00072561|Name=TCONS_00072561|organism=Clytia hemisphaerica|type=transcript|length=5932bp|location=Sequence derived from alignment at scaffold_8:256752..262683- (Clytia hemisphaerica)
ATCAATACTGAAGGTGAAGAGGAATTGATTTTCCCAGAAGGTAGGCAGGT
ATTCATATATTGCTTTCGAAAAGTGTTCTATATTTATAGTGCTCTTAGCC
TACTAAAGTCCATTCGCTTTTAAACTGCACTCTTTTTTATCATAATGTAG
AAACCACTCTCAAAGGAATCTAACTATGTTAGCATGGTTTCTACATAGTA
ACAAAAAATTATTTATTTCCTCCAACAACAGAATCGTCAACAATTGTAAC
CGATGATAGAATTACCGATCACATTACTAAAACAACAAAAGGTTTCTTTT
GTCCTTACTGTAACAAGAAACTAAGCAGCAAAGCTAATCGCACATATCAC
ATGCGGATATGCTCAAACAAAGATCAAACTGGTGCGGGTAATAGTAATAT
CAATGACGAGGACCAGACTGCAGCTATCAACGAAACTGTGTATGATGGTG
ATGAAGCCAATAACAACAACATCAGGTTGGTGCAGACATCCATGAACCGC
ATGGTAAAAATCTACCGAAGAAAGATGCAAGCAAACAGAGGGAACATCAT
TCCAACAATTGCAGATTTTAGAGAATTCCTTGATGTTATTCGCTCTAATG
ATTCCATCAAATTCTATTTTTCCGTCAAACTCCTTTACCATCAGGCCAAG
GATCCAAGCCATATCACCGACCCTCCTGTCATCCACACCTCAGATGTCTA
CATGTTTCTAGTCGATGATACGATGATACCAGAACAAATAGAAACAGCAC
TAAAGAGAATAGTAGACAAGATAGAAGCCTACGAGCGAAATGGTAGCGGA
TGGGTTGTTGATCAATTGCTCTCTATTGATTTAGGTAAATGTAAAGACTT
TTTACATGCTCCCTATCTTACATTAACAAGTATTTCTACTTTCCAGTGTG
TTGTAAAGTTAAGCTAACGTAATTTCTTCTCTTTTTTCAGCTGCTGTTAA
ATATGATCCACTAAATGCATCATCATACATTCCCTTACCAAAATTCGTGT
CATCGAAAAACGCATGTCTAAACGTTGACAACACAGATGAAAGATGTTTT
ATGTGGGCCATCCTAGCTGCTCTATACTCCTGTGAGAGGAATAGTCAGAG
GCATACCCATTATCGTAAGCATGTGAGTAAGTTGAACTTCAAGGGAATCC
CCTTCCCTGTCTTGATCAAAGATGTACCCAAATTTGAAACCCAGAACAAC
ATTTCGGTGAACGTGATTGGATATGAAGATGAGACCTTCTTCCCTCTGTT
CGTGAGCAGTAACATCGAAGATGGAAAGAAACACGTCAACTTGCTGTACT
TCTCCAACGGTGAAGGATCAACTCATTACGCATGGATTAAAGACTTATCT
AAACTATTAACTAACCAACTTTCAAACCACGACGGCCGAAAGTATTTTTG
TATGTATTGCTTGCATGGTTTTGAGAAAAGCTCGGGGCAAATAGAACACA
CAAAGATTTGTAAACAACATGGCGTGCAGGCTGTGTCTTATCCAAAGAAC
AATGGTATTGACGATGTAATTTCATTCACTAAAATCGAGCATCAACTGAA
ACTACCTTTCACAATCTATGCTGACTTCGAATGCTTCCTTGAGAAGATGA
CAGGGGAAGATGATTTTAACAAGAAAACAAAGAAGAGCAACATCCACAAA
CCGAGCGGATTCGCTTTACACATTGTTAGCTCAGACCCGCGATTCTATAA
AGAACCGTTTGTTTACTTCGGAGAAGACGCAGCGGAAAAGTTTTTGGACA
AATTGATGGAGGAAGTGGCTAGTCTTAGAAAGATCTTAGCAAGAAAGATC
CCAATGGAAGAGTTGAGCAGCAGTCAGAAGAAAAAACACAAAGAAACCAA
AACTTGCTACATTTGTGGTAAACCATTCCCAAAAGGGTGGACCTTCGATC
GAAATCAAATCAAAGTCCGCGACCATAACCATGTCACAGGTAGGACCCAT
TTCTTTCCCATGATTTATTCTTCTTAGGCTGACAGCTTGAAAGTAATCTT
ATAACCTTTGTTTTACCTTCAGGAAAATACAGGGGCCCAGCACATTCGAT
ATGCAACCTACAGCTAAGAATAAATCCGAAAAAGATTAAAATTCCTGTCA
TCTGTCATAATCTTAAAGGTTATGATAGTCACTTAATATTATCTGCAATA
AAGCCAGAGCATGGAAAGACATTCTGTATCCCGCAATCAAGTGAGAAATA
CATTGGTAAGTTGTTTTATTTCTATTTTCCCCCCCCCCCCCTCCACCACT
CTTTTTCTTTTCATCTTTCTTTTGTATCCTTAAACAATACTGTACTCTTT
TTACATTAGGCTTTTCAATCGGAAACATCACATTCATTGATTCGTTCCAA
TTCATGCCTTCGTCAATGGCTAAGCTCGCTTCGAATCTCGCAAAAGATCA
GTTCCATCAAGTCATTCGGTATCTGAAGTCAACAACCTCGTACAACGACG
ATAACAGTATGAATGTGGATGGAAACGATACCAGTGGTGACTACAGAGAT
CATAGGTGTTATGAAGAACCCAACCTCTCCCCTCGACAAATGAATGAAGT
TGAAGAGCGCTTCATCCTTTTGACTAGAAAAGGTATATATCCTTACGAAT
ACTTCGATGACATCACGAGGTTTGATGAAAATGAACTTCCACCAAGAGAA
TCCTTCTACAGCACACTTTCAGAAGAGAATGTGAGCGAAGAAGATTACAA
TCATGCGAAAAATGTATGGAACAAGTTCGAGGTAAAGGCTTTTGATTTGA
AATTTTGATTTTACAAATGAAGTTTCCTGTTTGTTTATACGTAACAAATG
AGAAGGTGAGATGAGATTCCTTGTGACGGTGATTATATTTATTGTTAACA
TTTATCTAGATGGAAAGCCTGAAGGACTATCATAACTTGTATGTGTTGAC
AGATGTGNATGACGGTGATTATATTTATTGTTAACATTTATCTAGATGGG
AAGCCTAAAGGACTATCATAACTTGATCATGGCTGATGTCTTCGAAGCCT
TCCGTAAAAACTGTTTACAGCATTACCAACTAGATCCAGCTCACTATTTC
ACAGCTCCAGGGATGTCATGGGAAGCAGCTTTGAAAAAGACAGGTATCAG
TTTGCAACTACTTACCGACCCTGACCAATATCTTTTCGTGGAGAAAGGAA
TCAAAGGTGGCATATCGATGATAACACAACGTTATGCGAAAGCAAATCTT
GAAGATCTTCCGAACTACGACCCGACAATAAAAGATACACATTTGGTTTA
TCTCGACGCCAACAACCTTTATGGTTGGGCAATGTCCCAATCATTACCCA
TAGGTAAAAATGTAGTTTCACTTTTCATGTGGTTTGTTTATTTCAATTCA
ACTTCATTTTTCTATCTATTTTTCTATCTGTCTTTTTGTTTTTATCTTAG
GAAATTTTCAATGGTTAAAGGATGACGAGATTGAACAATTCGATGTTAGC
ACAATTTCAGATGAGGCAGAAGATGGTTTCATCATCGAGTGTGATTTAGG
TAAACGATGAATGATTTACTCATAGAATAATAGATGATGTTCTGAAAGAT
TGAAGTTACTAAACATAAACTATTGATGAAATTTTTTATTTTCATCGTAT
CATCATACTATTTCAGATTATCCTGCCATCTTACACGATGCACACTCTGA
ATATCCACTGGCGCCAGAACGAATGGAAGTTGCAGAAGACATGCTTTCAC
CAAAACAAAAAGAAATTTTAAGAAAAGAGAACACCGAATTCAAAAGTTAT
CCTAAACTCGTACCAAATCTTTTCGATAAAAGAAAGTATGTTCTCCACTA
CCGTAACCTCAAGTGCTATCTATCATTGGGTATGGAATTGAAATCGGTAA
GAAATATTTTTAAAAAGCTATTTAGTATGAATGTATGCGTGTAGTTGTGG
TATTGATGGTGATTGAATAGTGTATACAACCATATTATTATTATATATTT
TTCAGATTTCCAGAATCCTCACATTCAAGCAATCCAAGTGGTTGAAGCCA
TACATCGAGTACAATACAATTCAAAGAAGTCGATCGACCAATGATTTTGA
GAAAGACTTCTTTAAGTTAATGAATAACTCAATGTTTGGGAAGACCATGG
AAAATATGAGAAAAAGACGGAAAGTCGATCTTGTTACAGGTACTTTTAAT
TTTCATGATTTCTGATTATTATTTATTCTTATTATTTTTACTTGGTACTT
ATCATTGTTTTACTCTCTCTTTCTCTCTTTCAGCACCGAACTCGTTGAGA
AGATTTGTAGCTCAACCATCATTTAAAAAGCTACACATTTTCCATGAAAA
CTTAGTGGGCGTGGAACGGATTCAGCAAAATATTTTATTGAACAAACCAA
TATACATTGGATTCACAGTGTTAGATCTAAGCAAGATCCTCATGTATGAT
TTTCATTATAAGTACATAAAGCAACGTTTTCCAGAAGAAAAATCTCGATT
ATTGTTCACTGATACGGATAGTTTGTGCTACGCGATCCGAGATCAAAATA
TGTACCAAGTGTTTTCTGACGATCGTGACCTCTTCGATTTCAGTAATTAT
CCTGACTCACATATGTGTTATGATCTTACGAACAAGAAGGTCATTGGCAA
GTTTAAAGATGAGTTAGGAGGTGACAACTTGAGGGAGTTCATCGGTCTCA
AGGCAAAAATGTACTCGATGTACTATCATACATATGACAAGAAGCAGAAA
AAAGTCATCCCTATCGAATCAAAGAAGGCAAAAGGTGTTAAAAAGATCAC
TTTGAAAAATAGAGTGACACACGATGATTACAAATCTACATTGATGGATA
TGTCAACCGTATCCACAACATTTAATTCGATCCGAAGTTTCAAGCACGTT
CTCTATACCATCGAACAAAATAAAAAAAGTCTATCACCGTTCGATGACAA
GCGCTACATTTTAGATGATGGTATTCATACTCTAGCCCATGGACACTACT
CATTGAGGAATTAATCCGAACATATTTTTATTGATCTTTTGTACTTTTTA
TATTCATTTTATTCATCATTTTTAAATAGATGTAAATATAAATTTAAGAA
TCTAAAAAGTTTACAATCCTACTCTTTAAACCTTTAACCCAATAATCATC
TACTAAAAGTTCAGATTTACTAAATATGACTTCGCCATTCATGTTCATAG
CTTTGTTACAATTTCTATTTGCTTCCTCTTCGTCTACATGTTTAAGGAGA
TTCGAGAATGCGTCTTCAACGAATCGTTCTGCTTCAGTTGTAAGACAGTA
ATGGTGAATTTGACTTGGATAACCTTCTAAACACCCTTCGCACATCTCCC
TTCGCACGTTGAAAACTTTTTCACGAATTAATAGAAAATATACACTTTGC
ATTTCTTCTTTGTATCTCTTTCGATTGTATTCAGTCAAACGTTTCGAAAC
ATTATCGATTAAAACTTCTGCTTTGCCAGGTGTTAGTATGATAAAGGAGT
TTGATTGCTGTCCAATGAATTTTTGTTCGATTATGATGAACTCGTCTCCA
TCTTGATCGAAGTAGGTTTCAACACCGAAACTGAGACTACGATTATCCTT
CCATTTTGAAATTCTAGTCTCAAAGCATTTCTTCTTTTTCGGAGCAGCTG
GACAGCGGTTTAGCACTTCATTTCTTTTTTGAATCGGCGTTGATGCTTCC
ATTGCTTACTTGATTAATGTAATGAGAGTGCGAAGAAAATGAAACCCAAA
GCGTAAAGAAAACCACGAGATGTGAACCAAGTATTCCAGAGCTTAGAACA
AATTCGAATGAAGCTCATTCTCTCCTTACTCAAATAAAAATAATAATAAC
ATGTTAATATAAACATTGCTATATATATCAAACCTTTCACATGGTGTTAT
TGTCAACGATGTACTCACTTTCTGTAGTGTCACTCACTTTCTGTAGTGTC
ACTCACTTTCTGTAGTGTCACTCACTTTCGGC

Coding sequence (CDS) from alignment at scaffold_8:256752..262683-

>TCONS_00072561 ID=TCONS_00072561|Name=TCONS_00072561|organism=Clytia hemisphaerica|type=CDS|length=2322bp|location=Sequence derived from alignment at scaffold_8:256752..262683- (Clytia hemisphaerica)
ATCAATACTGAAGGTGAAGAGGAATTGATTTTCCCAGAAGAATCGTCAAC
AATTGTAACCGATGATAGAATTACCGATCACATTACTAAAACAACAAAAG
GTTTCTTTTGTCCTTACTGTAACAAGAAACTAAGCAGCAAAGCTAATCGC
ACATATCACATGCGGATATGCTCAAACAAAGATCAAACTGGTGCGGGTAA
TAGTAATATCAATGACGAGGACCAGACTGCAGCTATCAACGAAACTGTGT
ATGATGGTGATGAAGCCAATAACAACAACATCAGGTTGGTGCAGACATCC
ATGAACCGCATGGTAAAAATCTACCGAAGAAAGATGCAAGCAAACAGAGG
GAACATCATTCCAACAATTGCAGATTTTAGAGAATTCCTTGATGTTATTC
GCTCTAATGATTCCATCAAATTCTATTTTTCCGTCAAACTCCTTTACCAT
CAGGCCAAGGATCCAAGCCATATCACCGACCCTCCTGTCATCCACACCTC
AGATGTCTACATGTTTCTAGTCGATGATACGATGATACCAGAACAAATAG
AAACAGCACTAAAGAGAATAGTAGACAAGATAGAAGCCTACGAGCGAAAT
GGTAGCGGATGGGTTGTTGATCAATTGCTCTCTATTGATTTAGCTGCTGT
TAAATATGATCCACTAAATGCATCATCATACATTCCCTTACCAAAATTCG
TGTCATCGAAAAACGCATGTCTAAACGTTGACAACACAGATGAAAGATGT
TTTATGTGGGCCATCCTAGCTGCTCTATACTCCTGTGAGAGGAATAGTCA
GAGGCATACCCATTATCGTAAGCATGTGAGTAAGTTGAACTTCAAGGGAA
TCCCCTTCCCTGTCTTGATCAAAGATGTACCCAAATTTGAAACCCAGAAC
AACATTTCGGTGAACGTGATTGGATATGAAGATGAGACCTTCTTCCCTCT
GTTCGTGAGCAGTAACATCGAAGATGGAAAGAAACACGTCAACTTGCTGT
ACTTCTCCAACGGTGAAGGATCAACTCATTACGCATGGATTAAAGACTTA
TCTAAACTATTAACTAACCAACTTTCAAACCACGACGGCCGAAAGTATTT
TTGTATGTATTGCTTGCATGGTTTTGAGAAAAGCTCGGGGCAAATAGAAC
ACACAAAGATTTGTAAACAACATGGCGTGCAGGCTGTGTCTTATCCAAAG
AACAATGGTATTGACGATGTAATTTCATTCACTAAAATCGAGCATCAACT
GAAACTACCTTTCACAATCTATGCTGACTTCGAATGCTTCCTTGAGAAGA
TGACAGGGGAAGATGATTTTAACAAGAAAACAAAGAAGAGCAACATCCAC
AAACCGAGCGGATTCGCTTTACACATTGTTAGCTCAGACCCGCGATTCTA
TAAAGAACCGTTTGTTTACTTCGGAGAAGACGCAGCGGAAAAGTTTTTGG
ACAAATTGATGGAGGAAGTGGCTAGTCTTAGAAAGATCTTAGCAAGAAAG
ATCCCAATGGAAGAGTTGAGCAGCAGTCAGAAGAAAAAACACAAAGAAAC
CAAAACTTGCTACATTTGTGGTAAACCATTCCCAAAAGGGTGGACCTTCG
ATCGAAATCAAATCAAAGTCCGCGACCATAACCATGTCACAGGAAAATAC
AGGGGCCCAGCACATTCGATATGCAACCTACAGCTAAGAATAAATCCGAA
AAAGATTAAAATTCCTGTCATCTGTCATAATCTTAAAGGTTATGATAGTC
ACTTAATATTATCTGCAATAAAGCCAGAGCATGGAAAGACATTCTGTATC
CCGCAATCAAGTGAGAAATACATTGGCTTTTCAATCGGAAACATCACATT
CATTGATTCGTTCCAATTCATGCCTTCGTCAATGGCTAAGCTCGCTTCGA
ATCTCGCAAAAGATCAGTTCCATCAAGTCATTCGGTATCTGAAGTCAACA
ACCTCGTACAACGACGATAACAGTATGAATGTGGATGGAAACGATACCAG
TGGTGACTACAGAGATCATAGGTGTTATGAAGAACCCAACCTCTCCCCTC
GACAAATGAATGAAGTTGAAGAGCGCTTCATCCTTTTGACTAGAAAAGGT
ATATATCCTTACGAATACTTCGATGACATCACGAGGTTTGATGAAAATGA
ACTTCCACCAAGAGAATCCTTCTACAGCACACTTTCAGAAGAGAATGTGA
GCGAAGAAGATTACAATCATGCGAAAAATGTATGGAACAAGTTCGAGATG
GAAAGCCTGAAGGACTATCATAACTTGTATGTGTTGACAGATGTGNATGA
CGGTGATTATATTTATTGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045029XLOC_045029Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072561-proteinTCONS_00072561-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072561-exon-scaffold_8-1575043694:262644..262683TCONS_00072561-exon-scaffold_8-1575043694:262644..262683Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:261850..262452TCONS_00072561-exon-scaffold_8-1575043694:261850..262452Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:260745..261743TCONS_00072561-exon-scaffold_8-1575043694:260745..261743Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:260479..260661TCONS_00072561-exon-scaffold_8-1575043694:260479..260661Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:259953..260374TCONS_00072561-exon-scaffold_8-1575043694:259953..260374Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:259381..259824TCONS_00072561-exon-scaffold_8-1575043694:259381..259824Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:259185..259283TCONS_00072561-exon-scaffold_8-1575043694:259185..259283Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:258838..259067TCONS_00072561-exon-scaffold_8-1575043694:258838..259067Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:258545..258728TCONS_00072561-exon-scaffold_8-1575043694:258545..258728Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1575043694:256752..258450TCONS_00072561-exon-scaffold_8-1575043694:256752..258450Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:262644..262683TCONS_00072561-exon-scaffold_8-1510915933:262644..262683Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:261850..262452TCONS_00072561-exon-scaffold_8-1510915933:261850..262452Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:260745..261743TCONS_00072561-exon-scaffold_8-1510915933:260745..261743Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:260479..260661TCONS_00072561-exon-scaffold_8-1510915933:260479..260661Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:259953..260374TCONS_00072561-exon-scaffold_8-1510915933:259953..260374Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:259381..259824TCONS_00072561-exon-scaffold_8-1510915933:259381..259824Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:259185..259283TCONS_00072561-exon-scaffold_8-1510915933:259185..259283Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:258838..259067TCONS_00072561-exon-scaffold_8-1510915933:258838..259067Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:258545..258728TCONS_00072561-exon-scaffold_8-1510915933:258545..258728Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1510915933:256752..258450TCONS_00072561-exon-scaffold_8-1510915933:256752..258450Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:262644..262683TCONS_00072561-exon-scaffold_8-1491911889:262644..262683Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:261850..262452TCONS_00072561-exon-scaffold_8-1491911889:261850..262452Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:260745..261743TCONS_00072561-exon-scaffold_8-1491911889:260745..261743Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:260479..260661TCONS_00072561-exon-scaffold_8-1491911889:260479..260661Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:259953..260374TCONS_00072561-exon-scaffold_8-1491911889:259953..260374Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:259381..259824TCONS_00072561-exon-scaffold_8-1491911889:259381..259824Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:259185..259283TCONS_00072561-exon-scaffold_8-1491911889:259185..259283Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:258838..259067TCONS_00072561-exon-scaffold_8-1491911889:258838..259067Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:258545..258728TCONS_00072561-exon-scaffold_8-1491911889:258545..258728Clytia hemisphaericaexon
TCONS_00072561-exon-scaffold_8-1491911889:256752..258450TCONS_00072561-exon-scaffold_8-1491911889:256752..258450Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:256752..262683 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.309882	0.331665	0.239615	0.267915	4.2299	3.84189	7.82229	10.3707	3.71317	6.26396	1.44724	0.820486	0.613252	0.626428	0.124461	0.253313	0.885119	0.604812	0.433859	0.403558	2.13382	1.75368	0.615284	0.890285	3.65166	3.14314	0.922366	1.23876	0.494945	0.47863
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072561 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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