TCONS_00072626 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072626
Unique NameTCONS_00072626
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1970

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072626 ID=TCONS_00072626|Name=TCONS_00072626|organism=Clytia hemisphaerica|type=transcript|length=1970bp
AATTATTGCCGTCTCAAGCCAAGAAGAACGCCCTGCTGACGTCACAAAAG
GCTACACCAAACCCATTCAATTTTACGAGACGACATCAGTTAGACTTTTC
TGGGAAGCATCGACAAGTACTAAAGAAAAAACATCAATATCTTATACAGT
GACCTACTGTAGACTAAATTTCCCCGACACGTGTACAACCCTGGAATCGA
CAAATGGTTTGACCCTGGTattgaaatcattgaataaagACACTTATTAT
CAATATAAAATCCAAGTTCGAGATCAACAGAATCAAACGGGTGCAAAACC
ATACGAAAATTACTTCAGGACAGAACGTAAAAATTCCTGTCAACCGGGTC
ATTTTCGTTGTACGGACAGTGCACAATGTGTGTTTTCCAACCGGACATGT
AATGGTATTCAAGATTGTGGTGATGGCAGCGATGAAAGAATCGATGCTGG
TTGCTCTGCACCACGTTACGCACCGAAAGATGTTCAATTAGTTGGTGCTG
GGTCTACGGTAGCCGAAATCAAATGGATTTCCGTTCCACAAAGTGATCGA
CCCTACTTATATAACATTCTCATTCAAGaTGGAACTGACGATGATCAAAC
GAAAAATATTCGTACAGGATTTGCCGCCATCTTGATTAGTGCTACACTAG
ACGGGTTATTACCCAATCGAGAATACACTATCAAGATTCGAGCTGTCAAT
GTCGTTGGTAGTGGTATCTATTCGGATCCACTGAAATTCAAAACCGCCCG
ATTAGATTTACCTACGCTCGAAATGCCTAAGAACGCATCAGTTACACCAA
TCTTATACCAAGAATCAACCAGTATCAAATTGTCCTGGTCATCACCAACA
GATCTCAAAGGAAACAATCCATCTTTGATCACCTACCAAGTCAACTATTG
TAGTATCAACAAAAAATGTGACAAGTTTACTGAGAAAGCTAGCAGAACGA
CAACACTATTAACTGACCTGCAACGAAGTCATATTTATCAGTTTACTATT
CGCGTTTTTAATGAAAACATGGAGAGCGACGATGAGAAATCAACTTACAC
TAACATATTCAAAACAGTTTCAAAGGACACCTGTAGATCGAACTTCTTCA
CGTGTACACAATCACCACAATGTGTTCAACAAGACAGAAAATGTGATGGT
CTCATTAATTGTTCAGATCGCAGTGATGAATCTGAAGCTGCTGGATGTGA
ATTACCACATTTCTTTGGCAAGATCAGCATCAAAGACGTCTCATACAATA
CAGCAATACTTCAATTCGAACCTAGCCGGGATCCAAAGCAAAGAATCAGA
GGCTACGAAATCGAAAACATGGTTACAAAAGAAACACAGCTCATTCGTCA
TTCAACATTATCTCACGAAAGAATCATCAAAGTCACCTTTGTTGGTTTAA
AGCCCTTGACACATTATGAATTCCGTGTTCGCGCTGTGAATCCAACGGGA
ACAGGGCTTTGGTCACCTCCTTCGAAGACTAGAACAACAGCTAAGCCAAC
ACCCAAACCTACCACAACTGACCCTAGATCTGGCGATACTACGACTTCAA
CACGGCGTCCAAAACCAACTATGGAGCCAGCGGAGAGTTCATCAGGTCTT
TCGAATAACGAGAAAGTTGGTGTTGCAGTGGCAATTATTCTTGCTGTTTT
GTTGGTGATCATAACTGTGGTAATTGTAACCAGAGACAAGTCAAAGAATG
GTAAAAAACCAGAATATACTGTAAAGCAAGGTGTATCTAATCCAAGTTAC
GTCGAAGGAGAAGTTTGATGGCGAAATCTTTTTGTAAATTATTTTATTTA
GAGGTTAGAAGTGCTCGACTGGAAGATCGAAAATCGACCCTTGAAAAGAC
ATATATTTCGGATATTTGAATAGTCTAGACGCCCAAGCGTCTTGACGGGG
AGCGGTTTTATAGGGTTCCAGATTCCGCCATTCCGCCATTCCGCCATTCT
ATCAAACAAAATAGcttaag
Run BLAST on NCBI

protein sequence of TCONS_00072626-protein

>TCONS_00072626-protein ID=TCONS_00072626-protein|Name=TCONS_00072626-protein|organism=Clytia hemisphaerica|type=polypeptide|length=588bp
IIAVSSQEERPADVTKGYTKPIQFYETTSVRLFWEASTSTKEKTSISYTV
TYCRLNFPDTCTTLESTNGLTLVLKSLNKDTYYQYKIQVRDQQNQTGAKP
YENYFRTERKNSCQPGHFRCTDSAQCVFSNRTCNGIQDCGDGSDERIDAG
CSAPRYAPKDVQLVGAGSTVAEIKWISVPQSDRPYLYNILIQDGTDDDQT
KNIRTGFAAILISATLDGLLPNREYTIKIRAVNVVGSGIYSDPLKFKTAR
LDLPTLEMPKNASVTPILYQESTSIKLSWSSPTDLKGNNPSLITYQVNYC
SINKKCDKFTEKASRTTTLLTDLQRSHIYQFTIRVFNENMESDDEKSTYT
NIFKTVSKDTCRSNFFTCTQSPQCVQQDRKCDGLINCSDRSDESEAAGCE
LPHFFGKISIKDVSYNTAILQFEPSRDPKQRIRGYEIENMVTKETQLIRH
STLSHERIIKVTFVGLKPLTHYEFRVRAVNPTGTGLWSPPSKTRTTAKPT
PKPTTTDPRSGDTTTSTRRPKPTMEPAESSSGLSNNEKVGVAVAIILAVL
LVIITVVIVTRDKSKNGKKPEYTVKQGVSNPSYVEGEV
Run BLAST on NCBI

transcript from alignment at scaffold_80:6843..12497-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072626 ID=TCONS_00072626|Name=TCONS_00072626|organism=Clytia hemisphaerica|type=transcript|length=5655bp|location=Sequence derived from alignment at scaffold_80:6843..12497- (Clytia hemisphaerica)
AATTATTGCCGTCTCAAGCCAAGAAGGTAAAAAATTTCGAATACCTTCAA
AGCTCATTTTATTTTATACACGTGTCAATGATGAGGCAGCAGGTGCTTGA
ATTCAAATTTACCAGGGCAATAATGACGTCTAATGATTATGTCTGTTTGA
ATCTCATTGCGAAAACTTTTATAAATGACCCCCTGCTAAACTTTAGGATC
CAATGCCCTTGGATGTTCCAGCTTATTATTATTACCCCCTGTATGTTTTT
TACTCTGTAAGACGTATTAAATTGGGAACTTTAGTATAATAAGAATGTAA
CAGAACTTAATTCTTCTAATTATCTAGAACGCCCTGCTGACGTCACAAAA
GGCTACACCAAACCCATTCAATTTTACGAGACGACATCAGTTAGACTTTT
CTGGGAAGCATCGACAAGTACTAAAGAAAAAACATCAATATCTTATACAG
TGACCTACTGTAGACTAAATTTCCCCGACACGTGTACAACCCTGGAATCG
ACAAATGGTTTGACCCTGGTATTGAAATCATTGAATAAAGACACTTATTA
TCAATATAAAATCCAAGTTCGAGATCAACAGAATCAAACGGGTGCAAAAC
CATACGAAAATTACTTCAGGACAGAACGTAAAAGTAAGTAAAACACGCGA
CCAGAGTTGTTTGCCTGAATCGCAGACCTCTTTTTTTTTAATCATCTAAA
ACGACCTGTTTGGCTCTATGGCTACACCAAACCCACTTATATGAGCAGAC
CCACAAGGATGAGCAGAAGCCTAGGTTGTCGTAAAAAAGAGTTTTACGCG
CGTTTGATATAAATTGATGTCATTCACTTAAATCTGTATTTTCAACGCCT
TGAAGAGACGTTAGTATACACCCCTTCCCACAGACCCACTGGGAACCCTT
CCCACTGGAAAAACTGGCCAAAATATCGTCCCCAATGAAAAATTATTATT
CTAATTTTTCTCCCTGCAAAATATTGTGCTATTTTTTTCATCCCCACTGA
ATTTTTTGGCTAAAAAATAATGGAATTCAAATCCCCGGCTATAAAAAATA
TGAGAATATCAATCCCCATCGAGTTTTGGTCCGTTATTTGCACCCCCACT
GGCTGATAAGACCCGGTCTGTGAGAAGGAGGTGTTAGTATAGCTTCAATT
CATCAGTAGAGTGAGAGGGACAAAATTTAAAAAAGGAAATATTGGAAATA
TGAGAGATAACTTGTCACAATACTGACTTTGACCATATTTGATTGTTCAA
CAAAATGTAAATATACAGCCAGCAAGATTTAGCTGGCATTTAGGTTTTAG
AAAAAAAAATTAAGATAAGAATTATTTCATTAAACATCATCAAACTCAAA
TTCTCCTTAATTTTATAGATTCCTGTCAACCGGGTCATTTTCGTTGTACG
GACAGTGCACAATGTGTGTTTTCCAACCGGACATGTAATGGTATTCAAGA
TTGTGGTGATGGCAGCGATGAAAGAATCGATGCTGGTTGCTGTGAGTTGA
TATTGTAGATATTGTCTTTTTAAGATTTGGAAAGGATGCTGACATAGCAA
AATAAGGAAACTAATTTCTCAACATTTGTGCTTGTGCGGTGTGTCAAGTA
GAGAAAGTTGTTCGTTCTTCTGTTTAAAAATGCTGTGTGAGTAAATGGTA
GGATATCCTTTAAGAGAACTTCTCAACTCTCTTTTACTTAATTGTCTCAT
TAACTCGAACGAGTTTTCTGATTCCTTCAGGTAATCGAAAACTTAATATC
TATTACTATATATAACGTGAACAAATTTCAATTCCCCATTAGTGCTCGAG
TTATGGAGACTCTATTGTAGGATTGAATAGCGCACCGCGCTGAATCTAAA
AATAGATTTTATTTTTGACATAATCATTAATGTCGATGTGTTTGTACGAG
TTCCAATTCCATCAACCTTTGCGCTAATCTCTTTTGCACGTTAATTGCAT
CGTTTGACAAAAGATATATAACAGCTCGCACGTATATTTAATAGACGATA
TCGGCTTTCGATAAATGCAATGCATTCTGGTTTCTCGGGACTCTCAAAGG
AATTATAATAGATGAATTATAATAGATTATAATTCCTTTGAGAGTCCCTA
GAAACCAGAATGCATTGCATTTATCGAAAGCCGATATCGTCTATTGAGCC
GCGTTGAATTGTGGGATTGCAACTCGTACAAATGTCAAAAAAAGTGAAAA
GTAATAATTATGACGTATGCATTGCGGAGCGCTATTGAACTGAGGTTGGA
AAAGGGGAAAGAATCGAATTACATAATTGGCAAATTATTTTCTGTTTATA
TTTTAGCTGCACCACGTTACGCACCGAAAGATGTTCAATTAGTTGGTGCT
GGGTCTACGGTAGCCGAAATCAAATGGATTTCCGTTCCACAAAGTGATCG
ACCCTACTTATATAACATTCTCATTCAAGGTATAACGACATTCTTAACTT
CCCTGGTTAAGCTAGTTTTACTTAAAGTTTGGAGCACTTAGCTTTTTTTT
GGTGCCGTGGAGCTGCACCTTACCGAGTCAAGGGAATCCAATCCTTAATC
AAAAAGTTTGATTCTTTATGTAAAACGATAATTGATCAATTTCTTCTTCT
TTCAGATGGAACTGACGATGATCAAACGAAAAATATTCGTACAGGATTTG
CCGCCATCTTGATTAGTGCTACACTAGACGGGTTATTACCCAATCGAGAA
TACACTATCAAGATTCGAGCTGTCAATGTCGTTGGTAGTGGTATCTATTC
GGATCCACTGAAATTCAAAACCGCCCGATTAGGTAAATGATAATAACAAT
AATAATATAGTGTAGTCTCTTTAACCTCCATAACTCGAGTCTGTACTGAA
CGGGAGTTATTTGATGAAGAAGTGGTGGTCCCCCCTCATTTTGGTCATAA
AATCGCTTATAAAATGACACTTCTACATCAAAAAACTCCCATTCAGTACA
GAAATCGGCCATACTCGCTTAAAAGTCTTCTATATAGTCTTCTATTGGTT
TTGGCCTAAAATAAGTTTGAAATTTCCATAAANAAAGTCTTCTATATAGT
CTTCTATTGGTTTTGGCCTAAAATAAGTTTGAAATTTCCATAAAAATTGG
GCCCTTTAGGCTTTAGCCTAGGTTTTCAATAAATAGGTCAAAATATTAGG
GCTACCCTTAATAAAACTTTTCTGGGCCTCTCTTCTAATATCAATCCACA
GGGTACTAGGCATGTCTGGTCCAAATTTGGTGCTTTGTTCCAAATTTGCA
CGATAATTACACCAATCAGGCCTACTAATAGAATCTTACCTACTAACAAA
ATTTCAACAATTATTTCAACATTCAATATTTTCTTTAGATTTACCTACGC
TCGAAATGCCTAAGAACGCATCAGTTACACCAATCTTATACCAAGAATCA
ACCAGTATCAAATTGTCCTGGTCATCACCAACAGATCTCAAAGGAAACAA
TCCATCTTTGATCACCTACCAAGTCAACTATTGTAGTATCAACAAAAAAT
GTGACAAGTTTACTGAGAAAGCTAGCAGAACGACAACACTATTAACTGAC
CTGCAACGAAGTCATATTTATCAGTTTACTATTCGCGTTTTTAATGAAAA
CATGGAGAGCGACGATGAGAAATCAACTTACACTAACATATTCAAAACAG
TTTCAAAGGGTAAGGGTTTACATCAGGGAAAGTTATAAAACAACGTAAAA
ACCAAATTGAACATAAATATTTAACTTTCCATCGTCCTGGTTTTACCATT
AGAATTAATATACAATAGGGGACCTTATGGATAGATAAAGAGAGCCGTAT
TTTATTTAGATAGCGCAGTATCAATGACTTTTATTAAAGGTAGTCCTTCG
ATTGTTTTCAAAAGGTTCACAACCAGCTTACTCGAATACCTATAAACTGA
ACAGAACATTGAATAAAGCTTCCACCCTAAATTTGTAGCGCTGACACGCC
TTAGACCACCTTAAACCACTCGTATTTCGCCAAAAAGTCCTTAGCTGAAC
TTTTTTTATTTTCACAATTAGACACCTGTAGATCGAACTTCTTCACGTGT
ACACAATCACCACAATGTGTTCAACAAGACAGAAAATGTGATGGTCTCAT
TAATTGTTCAGATCGCAGTGATGAATCTGAAGCTGCTGGATGTGGTAAGA
TCACCATTCGTTTCTTTTTTATACAATGATTCTTGAAAATTGTCAAAATC
TAGACTCCGATAGTGACACTCTGATCGATTTTTAATCTAATGAGGTGCAA
AATCACAGTGGAGCCAAAAATATACTAAGATGTTTAATATTTTCCTTACA
TTTTGGGCAGCTTATTTTATTACTAAGCATTAAAAGCCGATAATACGTAG
GGAACGAGGTTGCCAAAATAACAAGAGTGGTGTATTCAATGAGGTCATTG
TGAAGTTTCATGTCAAAGATATTTCCAGAGCTGTTATAGAATTAGAAATT
TATATTCTTTTTTTCTCCATAGAATTACCACATTTCTTTGGCAAGATCAG
CATCAAAGACGTCTCATACAATACAGCAATACTTCAATTCGAACCTAGCC
GGGATCCAAAGCAAAGAATCAGAGGCTACGAAATCGAAAACATGGTTACA
AAAGAAACACAGCTCATTCGTCATTCAACATTATCTCACGAAAGAATCAT
CAAAGTCACCTTTGTTGGTTTAAAGCCCTTGACACATTATGAATTCCGTG
TTCGCGCTGTGAATCCAACGGGAACAGGGCTTTGGTCACCTCCTTCGAAG
ACTAGAACAACAGGTATTAATATTTCTTTTCAACAAATTTTACTCTGTGC
TCTATTTTTAACACTACCATGAGTTTTTTAAGATCCACTACTTGCTGATA
TAAGTTTTTTAAGACTCTGTAAGACTTTACACCAAAATCTTTGAGAGCTT
TCCTCCCAGGACCTCCTTTGTGATGACTCATAAGAGCCGTCCTTTGAAAG
GACTAATTTTAGTGAGAATTAATTTTAGCAATTTTGGTGAGTTTTGAAGA
AGTCTGCGCCTAAATTGGTTCTCGCTAAAATTGAAAAAATTGCTTCCTCG
CAAAATGTTAGTTCTCTCTCAAAATTAAAAAAAGCGTCAATCTCTAAAGT
TTCACCTCGCCAAATTTATAAAGAATCAATCAGAGAGGGTAGCCGTATAA
CCCAAAATCAATTTAAATTTTTCAGCTAAGCCAACACCCAAACCTACCAC
AACTGACCCTAGATCTGGCGATACTACGACTTCAACACGGCGTCCAAAAC
CAACTATGGAGCCAGCGGAGAGTTCATCAGGTCTTTCGAATAACGAGAAA
GTTGGTGTTGCAGTGGCAATTATTCTTGCTGTTTTGTTGGTGATCATAAC
TGTGGTAATTGTAACCAGAGACAAGTCAAAGAATGGTAAAAAACCAGAAT
ATACTGTAAAGCAAGGTGTATCTAATCCAAGTTACGTCGAAGGAGAAGTT
TGATGGCGAAATCTTTTTGTAAATTATTTTATTTAGAGGTTAGAAGTGCT
CGACTGGAAGATCGAAAATCGACCCTTGAAAAGACATATATTTCGGATAT
TTGAATAGTCTAGACGCCCAAGCGTCTTGACGGGGAGCGGTTTTATAGGG
TTCCAGATTCCGCCATTCCGCCATTCCGCCATTCTATCAAACAAAATAGC
TTAAG

Coding sequence (CDS) from alignment at scaffold_80:6843..12497-

>TCONS_00072626 ID=TCONS_00072626|Name=TCONS_00072626|organism=Clytia hemisphaerica|type=CDS|length=1767bp|location=Sequence derived from alignment at scaffold_80:6843..12497- (Clytia hemisphaerica)
ATTATTGCCGTCTCAAGCCAAGAAGAACGCCCTGCTGACGTCACAAAAGG
CTACACCAAACCCATTCAATTTTACGAGACGACATCAGTTAGACTTTTCT
GGGAAGCATCGACAAGTACTAAAGAAAAAACATCAATATCTTATACAGTG
ACCTACTGTAGACTAAATTTCCCCGACACGTGTACAACCCTGGAATCGAC
AAATGGTTTGACCCTGGTATTGAAATCATTGAATAAAGACACTTATTATC
AATATAAAATCCAAGTTCGAGATCAACAGAATCAAACGGGTGCAAAACCA
TACGAAAATTACTTCAGGACAGAACGTAAAAATTCCTGTCAACCGGGTCA
TTTTCGTTGTACGGACAGTGCACAATGTGTGTTTTCCAACCGGACATGTA
ATGGTATTCAAGATTGTGGTGATGGCAGCGATGAAAGAATCGATGCTGGT
TGCTCTGCACCACGTTACGCACCGAAAGATGTTCAATTAGTTGGTGCTGG
GTCTACGGTAGCCGAAATCAAATGGATTTCCGTTCCACAAAGTGATCGAC
CCTACTTATATAACATTCTCATTCAAGATGGAACTGACGATGATCAAACG
AAAAATATTCGTACAGGATTTGCCGCCATCTTGATTAGTGCTACACTAGA
CGGGTTATTACCCAATCGAGAATACACTATCAAGATTCGAGCTGTCAATG
TCGTTGGTAGTGGTATCTATTCGGATCCACTGAAATTCAAAACCGCCCGA
TTAGATTTACCTACGCTCGAAATGCCTAAGAACGCATCAGTTACACCAAT
CTTATACCAAGAATCAACCAGTATCAAATTGTCCTGGTCATCACCAACAG
ATCTCAAAGGAAACAATCCATCTTTGATCACCTACCAAGTCAACTATTGT
AGTATCAACAAAAAATGTGACAAGTTTACTGAGAAAGCTAGCAGAACGAC
AACACTATTAACTGACCTGCAACGAAGTCATATTTATCAGTTTACTATTC
GCGTTTTTAATGAAAACATGGAGAGCGACGATGAGAAATCAACTTACACT
AACATATTCAAAACAGTTTCAAAGGACACCTGTAGATCGAACTTCTTCAC
GTGTACACAATCACCACAATGTGTTCAACAAGACAGAAAATGTGATGGTC
TCATTAATTGTTCAGATCGCAGTGATGAATCTGAAGCTGCTGGATGTGAA
TTACCACATTTCTTTGGCAAGATCAGCATCAAAGACGTCTCATACAATAC
AGCAATACTTCAATTCGAACCTAGCCGGGATCCAAAGCAAAGAATCAGAG
GCTACGAAATCGAAAACATGGTTACAAAAGAAACACAGCTCATTCGTCAT
TCAACATTATCTCACGAAAGAATCATCAAAGTCACCTTTGTTGGTTTAAA
GCCCTTGACACATTATGAATTCCGTGTTCGCGCTGTGAATCCAACGGGAA
CAGGGCTTTGGTCACCTCCTTCGAAGACTAGAACAACAGCTAAGCCAACA
CCCAAACCTACCACAACTGACCCTAGATCTGGCGATACTACGACTTCAAC
ACGGCGTCCAAAACCAACTATGGAGCCAGCGGAGAGTTCATCAGGTCTTT
CGAATAACGAGAAAGTTGGTGTTGCAGTGGCAATTATTCTTGCTGTTTTG
TTGGTGATCATAACTGTGGTAATTGTAACCAGAGACAAGTCAAAGAATGG
TAAAAAACCAGAATATACTGTAAAGCAAGGTGTATCTAATCCAAGTTACG
TCGAAGGAGAAGTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045078XLOC_045078Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072626-exon-scaffold_80-1575043694:12472..12497TCONS_00072626-exon-scaffold_80-1575043694:12472..12497Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:11865..12170TCONS_00072626-exon-scaffold_80-1575043694:11865..12170Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:11007..11129TCONS_00072626-exon-scaffold_80-1575043694:11007..11129Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:10069..10191TCONS_00072626-exon-scaffold_80-1575043694:10069..10191Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:9716..9892TCONS_00072626-exon-scaffold_80-1575043694:9716..9892Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:8839..9159TCONS_00072626-exon-scaffold_80-1575043694:8839..9159Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:8354..8476TCONS_00072626-exon-scaffold_80-1575043694:8354..8476Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:7735..8025TCONS_00072626-exon-scaffold_80-1575043694:7735..8025Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1575043694:6843..7322TCONS_00072626-exon-scaffold_80-1575043694:6843..7322Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:12472..12497TCONS_00072626-exon-scaffold_80-1510915933:12472..12497Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:11865..12170TCONS_00072626-exon-scaffold_80-1510915933:11865..12170Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:11007..11129TCONS_00072626-exon-scaffold_80-1510915933:11007..11129Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:10069..10191TCONS_00072626-exon-scaffold_80-1510915933:10069..10191Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:9716..9892TCONS_00072626-exon-scaffold_80-1510915933:9716..9892Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:8839..9159TCONS_00072626-exon-scaffold_80-1510915933:8839..9159Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:8354..8476TCONS_00072626-exon-scaffold_80-1510915933:8354..8476Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:7735..8025TCONS_00072626-exon-scaffold_80-1510915933:7735..8025Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1510915933:6843..7322TCONS_00072626-exon-scaffold_80-1510915933:6843..7322Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:12472..12497TCONS_00072626-exon-scaffold_80-1491911889:12472..12497Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:11865..12170TCONS_00072626-exon-scaffold_80-1491911889:11865..12170Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:11007..11129TCONS_00072626-exon-scaffold_80-1491911889:11007..11129Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:10069..10191TCONS_00072626-exon-scaffold_80-1491911889:10069..10191Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:9716..9892TCONS_00072626-exon-scaffold_80-1491911889:9716..9892Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:8839..9159TCONS_00072626-exon-scaffold_80-1491911889:8839..9159Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:8354..8476TCONS_00072626-exon-scaffold_80-1491911889:8354..8476Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:7735..8025TCONS_00072626-exon-scaffold_80-1491911889:7735..8025Clytia hemisphaericaexon
TCONS_00072626-exon-scaffold_80-1491911889:6843..7322TCONS_00072626-exon-scaffold_80-1491911889:6843..7322Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072626-proteinTCONS_00072626-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_80supercontigscaffold_80:6843..12497 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.298177	0.381156	0.410593	0.0223168	0.28637	0	1.1671	1.26163	6.57384	8.04176	5.4319	19.2496	0.885526	1.62914	7.17339	2.5658	7.58054	10.8454	0.132332	0.287875	0.244639	0.057006	0.293963	0.225538	0	0	0.0753082	0.0445246	0.187225	0.254582
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002172LDrepeatLR_classA_rpt
IPR003961FN3_dom
IPR013783Ig-like_fold
IPR023415LDLR_class-A_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072626 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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