TCONS_00072788 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072788
Unique NameTCONS_00072788
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4240

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072788 ID=TCONS_00072788|Name=TCONS_00072788|organism=Clytia hemisphaerica|type=transcript|length=4240bp
atTACTCGATCCTTAGAACTAAATAAGAAAAAGAgtacaaaaatacaaat
aacTGTCTCGATAATGTCGGACTCAAAGTTcgaatttgatgaaaaaggaA
ACGAAAAAGCTTTGGCCGATGATGATGATTTCTTTGGGACTGAACccgag
aaagaaaaaattatgtcgGACAGTGAACTTAATAAAGATTTAACAAACGG
ACATGTATCTGAAAACGACTTATTAGAGGACAGTCCAAGAAAAGATGACA
TTCCTTCTGTCAGTGACCATGAAGACGATAAGGGAAATGATGAAACTGAA
CCAGAGAAAAGAGACCTAGAGAGTCCTGATGATTTTATCCAAGACAGCCC
TCGTAAAGATGATATGCCTCCTGTAGAAGATAGTCCCCGTAAACCAGATA
AGGAAGAAAGCCCTCGTGAACAAGAGGAAAGCCCTCGTAAAGACGATGAA
AGCCCTCGTAAAGACGATGAAAGCCCTCGTAAACATGATGAAAGCCCTCG
TAAACAGGAGGAAAGTCCTCGTAAATCAGAAGACGAAGAAGACAAAGCTG
AAGATCCTCCAGTTGAAAATAACGTCTCTGAACCGGAAGATGTAAATGAA
GAACCAGACTCTGCTAGAAGTAATAAAAGTAGTGAGGATAAACTGAATTC
AGCCAGAGAATCTCCTGTCCAAAGTGCAAGATCGAATGGTTCTGCAAAGA
GCACTAGAAGTAACCTAAGAGGTGACTCGGCTAAGAGTAATGGTCGAGCC
GAATCAGCTAAAAGTAATGGTCGAGCCGAATCGAGTCGCAGCAATCGAGT
CGAATCAAGCCGTAGTAATCGAGTCAGTGATTCAGCTAGAAGCACTCGAA
GTAATCGTGCAGAATCGAGTCACAGTAACCGACAACCTGTTGACAACGAT
TCACCTCGTAGCAGTGCTCCTGAGagtgatgatgatttttttgaagacaa
aaaagACGATTTACCTGGTCGTAAAAGTACTGCACGATCAACACGTTCGA
ATCGTCATTCGGACACAGAAGCACCTGCACAAAACGGTGAAGCTGATCGC
CAGTATGATGAcagtgaagaagaagaagaagaagatttaAATAAGAGATA
TATGTCGGATACTGAAGGCGAAAAATCTCCAAGgaattcAGACCGCAATT
CAGGACGAGACTCTGATCGACGCTCAAGAAATTCTAGACAAGATTCGGAC
AACAATGATGGACCAAGGGAGAATGGTAACGAGAATTATTCGGATGATGA
TTTCTCTGATGGTGACGGAAGTGATCGTGATTCACCAAGACCAAGTGGTA
GCGATGGTGGTTACTCAGACGAATCAGATGAAAACGATTCGGAGGAAGAA
CGAAaacgaaaagaagaagaaaatcgcAAGAAGAAAGAGAAACAAAAGAA
AGCCAAAAAGCCACCGCTGCCTAGACAACAACTAGTGAAATCAAGTGGAT
ACGGTGGCAAGAAAAAAGGTAAAGCGCGAGTGAAGAGCGTTGATAAAATC
AATGCAGGTGGCAACGGACAGTTCAATGATGACCGCAGTGTTCTCGTCAA
CCGAGTTTTATCCGCAAACCGGAACAAAGCCAAAGCTCTACATAACGTCA
TCTTCGAACTACAACAACACATCGAGACTCTAACCCAAGAgaataaagat
ttgaaaaaagcaGCTAGGATGCAAGACCGTGAATTAAAGAAATTGGATAA
CGCAGAAGCCGAGCTTCCAAGCTTGATTAAGAAACATCATGAGGAAGTCC
GTGTGCTGCAACAAAAGTTCAGAAAACAGAAAgagGCTGCTGAAAAATCT
CGTGAGAGCTTGAAGAAGCGTGAAGATGAACTAACGAAAACACAAGACAA
GTTGAGGAAATATCAGAAGATGGTCAAAGATAAAGGGTTGAtcgagaaaa
ataatttgaataaacgAGTCGAACAATTGGAACAGCAAGTCGAAGAAAAG
AACAATAAAATAGCGGAGTTATCAAGAAGCGTCCAACTACATGAGAAGAT
ACGCTCCAGAGAGCTCCGAGACAAGAACGAAAAATACAAGAAAGCTATtg
acgaaatgaaacgtttggAAAAAGAACACCGGGAACTTCAAGCTAAACTC
AAGGAAAAAGAGAAGGCCCTGGAATCCACTAATTTATACGCCCACAAAAT
ACAACTGCGTAAACACAGCAAAGACGAATCgcttttcagtgaaaattcgc
cCGTTCCCGCCCCTCTCAAACGCCAACAGCAAGAACGCCAACGCCaagat
caaaagaagaaagcaTTCTTAACGGATAACGCATCAGTGGACAACGAACC
TCAAAAGTCACCTCGATCAAAATACGATTCGCCTCGATCCATCAAACACG
ATTCTCCTCGATCGAACTTCGATTCACCTCGTGGTCATCGAGATGAAGTT
CAAACAGCAGTCAGTCAACACAATGACGATTTTTACGAGAAGAAAAGTGA
AGATCAGGAGAGATTGGAAGAAGTTGATCGTAAATTAGCTGAAATGAGGC
GTAAAGATGAGGAAGACAGACTCGAAAGAGAGCGCAAATTAGCGGAAGCT
GAACGCGAGCTTGATGAAAAGTTACGTCAGAAAGAACAAGAACGAATCGA
TTTGGAACGTGAAATCGCAGAACGAAAAGAACGCGAAAGACGGGAAGCAG
AGGAAGAGGAGCGGCGTCGTGAGGATGAGCAACGCCGCCAAGAAGAACTA
CGGCGCCAGAAGGCCGAAGGAGAAAAGCGACGCCAAGAacaagatgaaga
agaagaccGAATTTTCTTGGAGAAGAAGCGTAAAAAAGAACTGTTATTAG
CTAGAATGCAAGCTATCGACAAAGGTGAGAATCCAGATAACATCAACGAA
TCGTCGCCTTCCTTCAAACGGAAAGAGAAACCAAAGAAGAAAccaatttt
ccttcaaaatgatTCCGAAAAAGAAAATGCAAACAAGAGCTCAAAGGATG
ACGATAATGATGACTTCTTGTCTCATAAACCATTTGATTTCAGTGATAAG
GGTAAAGATAACCAAACCAAACCGGCTCCACGGCGTCGCGGCACCAATGA
TAGTCTCAAAAGTAATGAGAATCTATCAAGGAATAATTCCGGTCGTAAGA
ACTCTTGGGAATTCACGCAACGCGATGAAAATCTTCATCGTGGCTTGCCA
GCAAATGATTCACCCGCCGTACATCGTCGAAGTAATCTGGTAGACGACAG
TTTTGATGATAATCACTCGAACAACTCATCGGCGAGTAAGAAAGGTCGTC
GTGGAGAACCAATTAACGGTTTCGAGTCAACCTACTCGCCAACCGTTCTC
GACAACAGTCCTCGatctaacaacaacaacaacaacaacaacaacaatcg
cAATAATCGACGTAATCAACAAAAATCACTTTTCGACGAATTCGAAGACC
CGTTCAAAGAATCGACAAAAAAGCCGACAACTACGGCAAAAAAGACCACG
ATTTTATCTGATGGCGAAGATGACATTGACGACTTTTTAAATGATGACTA
TAATCCTTCTTCCACGACTAAAAAACAACCTCACCCACCTAAGACTCAAC
CAATTAGGTCCCGCCCTAATAGCGGGCGCCATAATGTAGGTCGATTATCT
GCTGCCGCCACGCCTGATATAGACGATGTTGAGGAGATATCACTGTAATG
GGTGGGAAAGTGCGTTTGGTTTTTAACTTTCTTCTGAGCTCTGTTAGAAG
TTCAATGATCGAGTCAATCTGCCTTTGAAAGCTACTGAGAATGGCTCCAT
TATGATAATATAATAAACAATTCTTTTCGCGGTAACAATGGTTAAGTTAT
AGAGTTTTAGTTAAATCCACGATATGACTGGCAGATGATTACTTACGCTA
AATTTGTACAGAGCGAACTCAATGGTCCAATTTTCTTTTCGTAGTTTATC
TCTCAAACGACGAATGTCGTATTGGTATCATATGTTCGTCTCTAAACGGA
AAAAAATGAACCGTTTACTTTAAAAATTGAGTTGTCTTTTGAAACGGCTC
TATTCTTGAATGAATAACTTCCAATCTCTAAATCAAGTTTCTTATAATTA
CTTTTAATTTCTTAAGCAGGCCCGGTGGaagggagactggggagacttcc
cacttttgaacaaatgagatttttctccttaaattcctagcgaattttat
ctcattttgagccttcagcctccccactttaacggtcaagctggagtttt
tacaagctctttgatgactctgttgatcgttaaatgttga
Run BLAST on NCBI

protein sequence of TCONS_00072788-protein

>TCONS_00072788-protein ID=TCONS_00072788-protein|Name=TCONS_00072788-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1215bp
ITRSLELNKKKSTKIQITVSIMSDSKFEFDEKGNEKALADDDDFFGTEPE
KEKIMSDSELNKDLTNGHVSENDLLEDSPRKDDIPSVSDHEDDKGNDETE
PEKRDLESPDDFIQDSPRKDDMPPVEDSPRKPDKEESPREQEESPRKDDE
SPRKDDESPRKHDESPRKQEESPRKSEDEEDKAEDPPVENNVSEPEDVNE
EPDSARSNKSSEDKLNSARESPVQSARSNGSAKSTRSNLRGDSAKSNGRA
ESAKSNGRAESSRSNRVESSRSNRVSDSARSTRSNRAESSHSNRQPVDND
SPRSSAPESDDDFFEDKKDDLPGRKSTARSTRSNRHSDTEAPAQNGEADR
QYDDSEEEEEEDLNKRYMSDTEGEKSPRNSDRNSGRDSDRRSRNSRQDSD
NNDGPRENGNENYSDDDFSDGDGSDRDSPRPSGSDGGYSDESDENDSEEE
RKRKEEENRKKKEKQKKAKKPPLPRQQLVKSSGYGGKKKGKARVKSVDKI
NAGGNGQFNDDRSVLVNRVLSANRNKAKALHNVIFELQQHIETLTQENKD
LKKAARMQDRELKKLDNAEAELPSLIKKHHEEVRVLQQKFRKQKEAAEKS
RESLKKREDELTKTQDKLRKYQKMVKDKGLIEKNNLNKRVEQLEQQVEEK
NNKIAELSRSVQLHEKIRSRELRDKNEKYKKAIDEMKRLEKEHRELQAKL
KEKEKALESTNLYAHKIQLRKHSKDESLFSENSPVPAPLKRQQQERQRQD
QKKKAFLTDNASVDNEPQKSPRSKYDSPRSIKHDSPRSNFDSPRGHRDEV
QTAVSQHNDDFYEKKSEDQERLEEVDRKLAEMRRKDEEDRLERERKLAEA
ERELDEKLRQKEQERIDLEREIAERKERERREAEEEERRREDEQRRQEEL
RRQKAEGEKRRQEQDEEEDRIFLEKKRKKELLLARMQAIDKGENPDNINE
SSPSFKRKEKPKKKPIFLQNDSEKENANKSSKDDDNDDFLSHKPFDFSDK
GKDNQTKPAPRRRGTNDSLKSNENLSRNNSGRKNSWEFTQRDENLHRGLP
ANDSPAVHRRSNLVDDSFDDNHSNNSSASKKGRRGEPINGFESTYSPTVL
DNSPRSNNNNNNNNNNRNNRRNQQKSLFDEFEDPFKESTKKPTTTAKKTT
ILSDGEDDIDDFLNDDYNPSSTTKKQPHPPKTQPIRSRPNSGRHNVGRLS
AAATPDIDDVEEISL
Run BLAST on NCBI

transcript from alignment at scaffold_84:118305..125967-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072788 ID=TCONS_00072788|Name=TCONS_00072788|organism=Clytia hemisphaerica|type=transcript|length=7663bp|location=Sequence derived from alignment at scaffold_84:118305..125967- (Clytia hemisphaerica)
ATTACTCGATCCTTAGAACTAAATAAGAAAAAGAGTACAAAAATACAAAT
AACTGTCTCGATAATGTCGGACTCAAAGTTCGAATTTGATGAAAAAGGAA
ACGAAAAAGCTTTGGCCGATGATGATGATTTCTTTGGGACTGAACCCGAG
AAAGAAAAAATTATGTCGGACAGTGAACTTAATAAAGATTTAACAAACGG
ACATGTATCTGAAAACGACTTATTAGAGGACAGTCCAAGAAAAGATGACA
TTCCTTCTGTCAGTGACCATGAAGACGATAAGGGAAATGATGAAACTGAA
CCAGAGAAAAGAGACCTAGAGAGTCCTGATGATTTTATCCAAGACAGCCC
TCGTAAAGATGATATGCCTCCTGTAGAAGATAGTCCCCGTAAACCAGATA
AGGAAGAAAGCCCTCGTGAACAAGAGGAAAGCCCTCGTAAAGACGATGAA
AGCCCTCGTAAAGACGATGAAAGCCCTCGTAAACATGATGAAAGCCCTCG
TAAACAGGAGGAAAGTCCTCGTAAATCAGAAGACGAAGAAGACAAAGCTG
AAGATCCTCCAGTTGAAAATAACGTCTCTGAACCGGAAGATGTAAATGAA
GAACCAGACTCTGCTAGAAGTAATAAAAGTAGTGAGGATAAACTGAATTC
AGCCAGAGAATCTCCTGTCCAAAGTGCAAGATCGAATGGTTCTGCAAAGA
GCACTAGAAGTAACCTAAGAGGTGACTCGGCTAAGAGTAATGGTCGAGCC
GAATCAGCTAAAAGTAATGGTCGAGCCGAATCGAGTCGCAGCAATCGAGT
CGAATCAAGCCGTAGTAATCGAGTCAGTGATTCAGCTAGAAGCACTCGAA
GTAATCGTGCAGAATCGAGTCACAGTAACCGACAACCTGTTGACAACGAT
TCACCTCGTAGCAGTGCTCCTGAGAGTGATGATGATTTTTTTGAAGACAA
AAAAGACGATTTACCTGGTCGTAAAAGTACTGCACGATCAACACGTTCGA
ATCGTCATTCGGACACAGAAGCACCTGCACAAAACGGTGAAGCTGATCGC
CAGTATGATGACAGTGAAGAAGAAGAAGAAGAAGATTTAAATAAGAGATA
TATGTCGGATACTGAAGGCGAAAAATCTCCAAGGTATGTTTATTAATTAG
TATCCATGAATATGCACCACAAAACTGACGAAATTATTTAATCTCTGTTA
TTTTTTTACACACTTCACTCGCAACAAATCAGCTGTTGTAAAAGTCACGT
AATGTCAGGAGACATTGCATGGGTGTGCATGTCTTGAATTTGTGATATGC
AACTATACGACTCAAGAAAAAGTAACTCAGTGTGTTGAAAATGGGAAGAC
TCTCCTTACCAAAACTAAAGCGCTCAAGACAAGATTTTTTGGACCTACCC
CGGTGGGGTGGTGGTCCTATAAATTCACCTCTGTCCGTTCGTCCGTCCGT
TCGTTACCAACTTTTCTCGAGATTGGCTCATTAGTTTTTTTTGATTTTTT
GCACAAAGATAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAA
GAAAAAAAATTTTGGGCGAATTTGGGCCAAAAACGGCTAAAAACGGGTTT
TTTGGACTTTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCATGA
AAGTAGGGTACCATCATGGGTAAAAGATGGGTCAAGCAGATTTTTGCAAA
AAAATTTTGTTGGTTCAAAAAACGCATCTTTATCTATAAAAATCACTATT
AATAAGCATACATCAATGTTCTTAGCCAAATTACTCAATTTTTTGATGAG
ATAGATGTTTTTTTTGCTCACGAAGTCTTGAATATGAAAGAATATTTCAA
GAGCATGAAATTTTGGTTTCTAAACGTTTTTTATAAGAAACAAGCGAATG
ATTTTAATAGATCGTCACTATTTGTGTTCGGAATGATTGTTTAACGGTCA
TGCTCACGTAGATATCAATTATATGTGTTAAATGCATAACCAGGTAGGTC
CATAAAAGTATCACTTGTTGGGTTTTAAAAGGAGTCTTTAGCAAGTGGGA
ATCGAGTGAAGACTGGTCTACTGTCAAATCTTCCTTTTCTTAAACTTTTA
TTTTCATTTTTAAGGAATTCAGACCGCAATTCAGGACGAGACTCTGATCG
ACGCTCAAGAAATTCTAGACAAGATTCGGACAACAATGATGGACCAAGGG
AGAATGGTAACGAGAATTATTCGGATGATGATTTCTCTGATGGTGACGGA
AGTGATCGTGATTCACCAAGACCAAGTGGTAGCGATGGTGGTTACTCAGG
TATTACGCTCTTTTTTAACGATTTTCGCCTTTATTGTCTATACTATAGCC
ATCTGTGTCGTCTACTAGACATATTTTAGAGATTTTTGCCACCAGATACT
TTGTTTTAGGGTTAAACCTCCAATTTTAGTGTTTGATTATTTCTCTCCGG
AAAGTCCGAAAATTTTCAACTTAAAAAAAGATAATTTGAAAATTCTTCGA
GCTATTGCTTATAAGCATAACTTTCAGAAAACTTTTTTGAATTAAAATTA
TACTATGACTACCAAAAACATTATTTTAGTCTTTTAAAATTCTTCTAAAA
TAAATAGGGAAATCAAGAAGAAACAGCTTTTTAAAGATTCATTGAGACTA
TGAACATTGTCAAATCCCTGTCTAACCTATCATTTCTTTTCCAATAGACG
AATCAGATGAAAACGATTCGGAGGAAGAACGAAAACGAAAAGAAGAAGAA
AATCGCAAGAAGAAAGAGAAACAAAAGAAAGCCAAAAAGCCACCGCTGCC
TAGACAACAACTAGTGAAATCAAGTGGATACGGTGGCAAGAAAAAAGGTG
GGGCGCTATTAACCTTTCGAATGCCCGACACTTTTTTTTAATTGTTGAGT
CCAAAACTTCAAACTGGCATAAAAGCTTGTAAATTGAAAGTTTTGAGACT
CTTTTGAACGAATATTTACGAAGATACATGTCGCTCGGGTTTGAAGGGTC
AATGGAAACTTTCGAGGTTCAACCGTATTTTAGAAGACTTGTCTTTAGGG
AAATCGGTGAAGTGTTGTGAATTGAAATACTGATACATTTTTGCTATTTC
ATGTAGGTAAAGCGCGAGTGAAGAGCGTTGATAAAATCAATGCAGGTGGC
AACGGACAGTTCAATGATGACCGCAGTGTTCTCGTCAACCGAGTTTTATC
CGCAAACCGGAACAAAGCCAAAGCTCTACATAACGTCATCTTCGAACTAC
AACAACACATCGAGACTCTAACCCAAGAGAATAAAGATTTGAAAAAAGCA
GCTAGGATGCAAGACCGTGAATTAAAGAAATTGGATAACGCAGAAGCCGA
GCTTCCAAGCTTGATTAAGAAACATCATGAGGAAGTCCGTGTGCTGCAAC
AAAAGTTCAGAAAACAGAAAGAGGTAAATTTTTTTATTCTAGTTTAGCTT
GGATCTTTGTCACCCGACGTTATTTTCTCTACAGGGTGTCCAAAAAACAA
AAACAAAAAATATCCATGATAGGCTGTCAGCAAACTAAGTATCGTACAAT
CTGTACCGACATACAAATTGGCGGCTTGAACTCATATTCTTCAAATTGTG
TAACTTGACGTCTTTACTGGCCCACTTTTGACACATTGGATTTGACAGTC
CTTAAGGAATAGAAATTTTGAAAATATGGTCGTTTGAATACACGTTCAAG
TTTATAATTATACCTTATTACACAAATATTACTAGTCATTTTATTGACAC
GGATTGAAAAATTTCGTGTTAATAAAAACCCCCTTAATTAAAACCAGCTA
TGGTGTCCTTGAAAAAGCAATAAAATTCGTGTTCATTTTTGGCGTGTTAA
TTTCAAGGCCGTTAAATACTTCCATACTTATATTCGCGTAATAAGGAAAA
TGCTTAACTTTTGTAGGCTGCTGAAAAATCTCGTGAGAGCTTGAAGAAGC
GTGAAGATGAACTAACGAAAACACAAGACAAGTTGAGGAAATATCAGAAG
ATGGTCAAAGATAAAGGGTTGATCGAGAAAAATAATTTGAATAAACGAGT
CGAACAATTGGAACAGCAAGTCGAAGAAAAGAACAATAAAATAGCGGTGA
GTGTTTTTTCGTGAGTAGGTTTATCAGCTATGTGCGACGAAAAAATTAGC
TTTTAGAATCGCACCCTTACAGTGCAGCAAAAAATCGGTGAGATCCATAC
CCTTACAGTGGTGCATTTGTCTCTATTTTGCAACTCTATTAGGGCAAAAG
AAAAATCTAAATTTCCGGGCAAAGATTTTTCCTGTATTTGCTGAAATGTT
CACCCTTAAAGTGCAATTATCAAAAGTCAACCCTTAAAGTGCGTTTCTGC
TATCTTGAAAAACATCCTCTCAACCGCCACACATACCCGTGCGTCGGTCA
ATTTGCATGACTGCCCCCCCCCCCGGATCTGCTGTCATCAATATTCAGGA
TACGCAACTCTGAACTTTCTTCTATCATAACGCACCGTAGCATGAAGGTA
AAGCATCCAGCTACGGTGCGCAAGGTTGAGGGTTCGATCCCCAGCCGGGT
CATACCAAAGATTCCCAAAATGGTACTTTATGCCTCTCTGCTTGATGCTC
AGCAACTAAAGAGACGGATCAAGGGTGAGTGGATAAATTCAGGGAAAGGA
GTGACGTCCTCCCCTACCTTCGGGTAGACAGCTAGAGAAAAGGGAGCCTG
CGGGTCGCCCTCGACTGCGGTCGCAAACTTACTTACTTACTATCATAACG
TCACACTCGCAGATATAGACACTTGATATCATTCGACCCTGTTAAACACT
CGAACCCAGTACCGTTTAAGCTTTAGGTTTATAAGACTTTTATGGATGAT
TTTCTATTTTAATTCAAAAATTTTACAACAGGAGTTATCAAGAAGCGTCC
AACTACATGAGAAGATACGCTCCAGAGAGCTCCGAGACAAGAACGAAAAA
TACAAGAAAGCTATTGACGAAATGAAACGTTTGGAAAAAGAACACCGGGA
ACTTCAAGCTAAACTCAAGGTATGAGACATTTTTATTCCATCTTTTATTC
TGGCTTTTAACTTTTGATAAAACCAGTTCTGTGATGATATATGTCATGAA
TTTTGACCAATATCTTTAACGCTCTGTAACGATCGGATACATACAGAGGC
ACGAGCTAACTATATATGCAGTAACTTCGCGAATATATACATGCGGTATC
CTACTTTACAGTATTTTATCGGCGACCCAGAAAAAAGATCAGCAGTCTAA
TTGATTAAAAGTTTTAAAATTGGTGGAGATGTGGTGTTGCATTGAGATCG
TAAAAGCAATCTTACGTCACTTTCTACCCAAATGTCTTTGGCTTTTTTCC
AATACAAAAATTTGGTCACCGTTTTAATCAGTTATCAGAATAGGCTGCTG
GCACCCACTAATGGATTCGTGCTCCTTACACTATCTGCGGTTTTGTAGAG
GTGGGCGATTCAGACTATTACCAGACGGGAACTTACACAATATATACGTT
CATATTATATTTCCGTTTTATTATAGGAAAAAGAGAAGGCCCTGGAATCC
ACTAATTTATACGCCCACAAAATACAACTGCGTAAACACAGCAAAGACGA
ATCGCTTTTCAGTGAAAATTCGCCCGTTCCCGCCCCTCTCAAACGCCAAC
AGCAAGAACGCCAACGCCAAGATCAAAAGAAGAAAGCATTCTTAACGGAT
AACGCATCAGTGGACAACGAACCTCAAAAGTCACCTCGATCAAAATACGA
TTCGCCTCGATCCATCAAACACGATTCTCCTCGATCGAACTTCGATTCAC
CTCGTGGTCATCGAGATGAAGTTCAAACAGCAGTCAGTCAACACAATGAC
GATTTTTACGAGAAGAAAAGTGAAGATCAGGAGAGATTGGAAGAAGTTGA
TCGTAAATTAGCTGAAATGAGGCGTAAAGATGAGGAAGACAGACTCGAAA
GAGAGCGCAAATTAGCGGAAGCTGAACGCGAGCTTGATGAAAAGTTACGT
CAGAAAGAACAAGAACGAATCGATTTGGAACGTGAAATCGCAGAACGAAA
AGAACGCGAAAGACGGGAAGCAGAGGAAGAGGAGCGGCGTCGTGAGGATG
AGCAACGCCGCCAAGAAGAACTACGGCGCCAGAAGGCCGAAGGAGAAAAG
CGACGCCAAGAACAAGATGAAGAAGAAGACCGAATTTTCTTGGAGAAGAA
GCGTAAAAAAGAACTGTTATTAGCTAGAATGCAAGCTATCGACAAAGGTG
AGAATCCAGATAACATCAACGAATCGTCGCCTTCCTTCAAACGGAAAGAG
AAACCAAAGAAGAAACCAATTTTCCTTCAAAATGATTCCGAAAAAGAAAA
TGCAAACAAGAGCTCAAAGGATGACGATAATGATGACTTCTTGTCTCATA
AACCATTTGATTTCAGTGATAAGGGTAAAGATAACCAAACCAAACCGGCT
CCACGGCGTCGCGGCACCAATGATAGTCTCAAAAGTAATGAGAATCTATC
AAGGAATAATTCCGGTCGTAAGAACTCTTGGGAATTCACGCAACGCGATG
AAAATCTTCATCGTGGCTTGCCAGCAAATGATTCACCCGCCGTACATCGT
CGAAGTAATCTGGTAGACGACAGTTTTGATGATAATCACTCGAACAACTC
ATCGGCGAGTAAGAAAGGTCGTCGTGGAGAACCAATTAACGGTTTCGAGT
CAACCTACTCGCCAACCGTTCTCGACAACAGTCCTCGATCTAACAACAAC
AACAACAACAACAACAACAATCGCAATAATCGACGTAATCAACAAAAATC
ACTTTTCGACGAATTCGAAGACCCGTTCAAAGAATCGACAAAAAAGCCGA
CAACTACGGCAAAAAAGACCACGATTTTATCTGATGGCGAAGATGACATT
GACGACTTTTTAAATGATGACTATAATCCTTCTTCCACGACTAAAAAACA
ACCTCACCCACCTAAGACTCAACCAATTAGGTCCCGCCCTAATAGCGGGC
GCCATAATGTAGGTCGATTATCTGCTGCCGCCACGCCTGATATAGACGAT
GTTGAGGAGATATCACTGTAATGGGTGGGAAAGTGCGTTTGGTTTTTAAC
TTTCTTCTGAGCTCTGTTAGAAGTTCAATGATCGAGTCAATCTGCCTTTG
AAAGCTACTGAGAATGGCTCCATTATGATAATATAATAAACAATTCTTTT
CGCGGTAACAATGGTTAAGTTATAGAGTTTTAGTTAAATCCACGATATGA
CTGGCAGATGATTACTTACGCTAAATTTGTACAGAGCGAACTCAATGGTC
CAATTTTCTTTTCGTAGTTTATCTCTCAAACGACGAATGTCGTATTGGTA
TCATATGTTCGTCTCTAAACGGAAAAAAATGAACCGTTTACTTTAAAAAT
TGAGTTGTCTTTTGAAACGGCTCTATTCTTGAATGAATAACTTCCAATCT
CTAAATCAAGTTTCTTATAATTACTTTTAATTTCTTAAGCAGGCCCGGTG
GAAGGGAGACTGGGGAGACTTCCCACTTTTGAACAAATGAGATTTTTCTC
CTTAAATTCCTAGCGAATTTTATCTCATTTTGAGCCTTCAGCCTCCCCAC
TTTAACGGTCAAGCTGGAGTTTTTACAAGCTCTTTGATGACTCTGTTGAT
CGTTAAATGTTGA

Coding sequence (CDS) from alignment at scaffold_84:118305..125967-

>TCONS_00072788 ID=TCONS_00072788|Name=TCONS_00072788|organism=Clytia hemisphaerica|type=CDS|length=3648bp|location=Sequence derived from alignment at scaffold_84:118305..125967- (Clytia hemisphaerica)
ATTACTCGATCCTTAGAACTAAATAAGAAAAAGAGTACAAAAATACAAAT
AACTGTCTCGATAATGTCGGACTCAAAGTTCGAATTTGATGAAAAAGGAA
ACGAAAAAGCTTTGGCCGATGATGATGATTTCTTTGGGACTGAACCCGAG
AAAGAAAAAATTATGTCGGACAGTGAACTTAATAAAGATTTAACAAACGG
ACATGTATCTGAAAACGACTTATTAGAGGACAGTCCAAGAAAAGATGACA
TTCCTTCTGTCAGTGACCATGAAGACGATAAGGGAAATGATGAAACTGAA
CCAGAGAAAAGAGACCTAGAGAGTCCTGATGATTTTATCCAAGACAGCCC
TCGTAAAGATGATATGCCTCCTGTAGAAGATAGTCCCCGTAAACCAGATA
AGGAAGAAAGCCCTCGTGAACAAGAGGAAAGCCCTCGTAAAGACGATGAA
AGCCCTCGTAAAGACGATGAAAGCCCTCGTAAACATGATGAAAGCCCTCG
TAAACAGGAGGAAAGTCCTCGTAAATCAGAAGACGAAGAAGACAAAGCTG
AAGATCCTCCAGTTGAAAATAACGTCTCTGAACCGGAAGATGTAAATGAA
GAACCAGACTCTGCTAGAAGTAATAAAAGTAGTGAGGATAAACTGAATTC
AGCCAGAGAATCTCCTGTCCAAAGTGCAAGATCGAATGGTTCTGCAAAGA
GCACTAGAAGTAACCTAAGAGGTGACTCGGCTAAGAGTAATGGTCGAGCC
GAATCAGCTAAAAGTAATGGTCGAGCCGAATCGAGTCGCAGCAATCGAGT
CGAATCAAGCCGTAGTAATCGAGTCAGTGATTCAGCTAGAAGCACTCGAA
GTAATCGTGCAGAATCGAGTCACAGTAACCGACAACCTGTTGACAACGAT
TCACCTCGTAGCAGTGCTCCTGAGAGTGATGATGATTTTTTTGAAGACAA
AAAAGACGATTTACCTGGTCGTAAAAGTACTGCACGATCAACACGTTCGA
ATCGTCATTCGGACACAGAAGCACCTGCACAAAACGGTGAAGCTGATCGC
CAGTATGATGACAGTGAAGAAGAAGAAGAAGAAGATTTAAATAAGAGATA
TATGTCGGATACTGAAGGCGAAAAATCTCCAAGGAATTCAGACCGCAATT
CAGGACGAGACTCTGATCGACGCTCAAGAAATTCTAGACAAGATTCGGAC
AACAATGATGGACCAAGGGAGAATGGTAACGAGAATTATTCGGATGATGA
TTTCTCTGATGGTGACGGAAGTGATCGTGATTCACCAAGACCAAGTGGTA
GCGATGGTGGTTACTCAGACGAATCAGATGAAAACGATTCGGAGGAAGAA
CGAAAACGAAAAGAAGAAGAAAATCGCAAGAAGAAAGAGAAACAAAAGAA
AGCCAAAAAGCCACCGCTGCCTAGACAACAACTAGTGAAATCAAGTGGAT
ACGGTGGCAAGAAAAAAGGTAAAGCGCGAGTGAAGAGCGTTGATAAAATC
AATGCAGGTGGCAACGGACAGTTCAATGATGACCGCAGTGTTCTCGTCAA
CCGAGTTTTATCCGCAAACCGGAACAAAGCCAAAGCTCTACATAACGTCA
TCTTCGAACTACAACAACACATCGAGACTCTAACCCAAGAGAATAAAGAT
TTGAAAAAAGCAGCTAGGATGCAAGACCGTGAATTAAAGAAATTGGATAA
CGCAGAAGCCGAGCTTCCAAGCTTGATTAAGAAACATCATGAGGAAGTCC
GTGTGCTGCAACAAAAGTTCAGAAAACAGAAAGAGGCTGCTGAAAAATCT
CGTGAGAGCTTGAAGAAGCGTGAAGATGAACTAACGAAAACACAAGACAA
GTTGAGGAAATATCAGAAGATGGTCAAAGATAAAGGGTTGATCGAGAAAA
ATAATTTGAATAAACGAGTCGAACAATTGGAACAGCAAGTCGAAGAAAAG
AACAATAAAATAGCGGAGTTATCAAGAAGCGTCCAACTACATGAGAAGAT
ACGCTCCAGAGAGCTCCGAGACAAGAACGAAAAATACAAGAAAGCTATTG
ACGAAATGAAACGTTTGGAAAAAGAACACCGGGAACTTCAAGCTAAACTC
AAGGAAAAAGAGAAGGCCCTGGAATCCACTAATTTATACGCCCACAAAAT
ACAACTGCGTAAACACAGCAAAGACGAATCGCTTTTCAGTGAAAATTCGC
CCGTTCCCGCCCCTCTCAAACGCCAACAGCAAGAACGCCAACGCCAAGAT
CAAAAGAAGAAAGCATTCTTAACGGATAACGCATCAGTGGACAACGAACC
TCAAAAGTCACCTCGATCAAAATACGATTCGCCTCGATCCATCAAACACG
ATTCTCCTCGATCGAACTTCGATTCACCTCGTGGTCATCGAGATGAAGTT
CAAACAGCAGTCAGTCAACACAATGACGATTTTTACGAGAAGAAAAGTGA
AGATCAGGAGAGATTGGAAGAAGTTGATCGTAAATTAGCTGAAATGAGGC
GTAAAGATGAGGAAGACAGACTCGAAAGAGAGCGCAAATTAGCGGAAGCT
GAACGCGAGCTTGATGAAAAGTTACGTCAGAAAGAACAAGAACGAATCGA
TTTGGAACGTGAAATCGCAGAACGAAAAGAACGCGAAAGACGGGAAGCAG
AGGAAGAGGAGCGGCGTCGTGAGGATGAGCAACGCCGCCAAGAAGAACTA
CGGCGCCAGAAGGCCGAAGGAGAAAAGCGACGCCAAGAACAAGATGAAGA
AGAAGACCGAATTTTCTTGGAGAAGAAGCGTAAAAAAGAACTGTTATTAG
CTAGAATGCAAGCTATCGACAAAGGTGAGAATCCAGATAACATCAACGAA
TCGTCGCCTTCCTTCAAACGGAAAGAGAAACCAAAGAAGAAACCAATTTT
CCTTCAAAATGATTCCGAAAAAGAAAATGCAAACAAGAGCTCAAAGGATG
ACGATAATGATGACTTCTTGTCTCATAAACCATTTGATTTCAGTGATAAG
GGTAAAGATAACCAAACCAAACCGGCTCCACGGCGTCGCGGCACCAATGA
TAGTCTCAAAAGTAATGAGAATCTATCAAGGAATAATTCCGGTCGTAAGA
ACTCTTGGGAATTCACGCAACGCGATGAAAATCTTCATCGTGGCTTGCCA
GCAAATGATTCACCCGCCGTACATCGTCGAAGTAATCTGGTAGACGACAG
TTTTGATGATAATCACTCGAACAACTCATCGGCGAGTAAGAAAGGTCGTC
GTGGAGAACCAATTAACGGTTTCGAGTCAACCTACTCGCCAACCGTTCTC
GACAACAGTCCTCGATCTAACAACAACAACAACAACAACAACAACAATCG
CAATAATCGACGTAATCAACAAAAATCACTTTTCGACGAATTCGAAGACC
CGTTCAAAGAATCGACAAAAAAGCCGACAACTACGGCAAAAAAGACCACG
ATTTTATCTGATGGCGAAGATGACATTGACGACTTTTTAAATGATGACTA
TAATCCTTCTTCCACGACTAAAAAACAACCTCACCCACCTAAGACTCAAC
CAATTAGGTCCCGCCCTAATAGCGGGCGCCATAATGTAGGTCGATTATCT
GCTGCCGCCACGCCTGATATAGACGATGTTGAGGAGATATCACTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045182XLOC_045182Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072788-exon-scaffold_84-1575043694:124835..125967TCONS_00072788-exon-scaffold_84-1575043694:124835..125967Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1575043694:123669..123853TCONS_00072788-exon-scaffold_84-1575043694:123669..123853Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1575043694:123121..123270TCONS_00072788-exon-scaffold_84-1575043694:123121..123270Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1575043694:122545..122861TCONS_00072788-exon-scaffold_84-1575043694:122545..122861Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1575043694:121872..122051TCONS_00072788-exon-scaffold_84-1575043694:121872..122051Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1575043694:120949..121086TCONS_00072788-exon-scaffold_84-1575043694:120949..121086Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1575043694:118305..120441TCONS_00072788-exon-scaffold_84-1575043694:118305..120441Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1510915933:124835..125967TCONS_00072788-exon-scaffold_84-1510915933:124835..125967Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1510915933:123669..123853TCONS_00072788-exon-scaffold_84-1510915933:123669..123853Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1510915933:123121..123270TCONS_00072788-exon-scaffold_84-1510915933:123121..123270Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1510915933:122545..122861TCONS_00072788-exon-scaffold_84-1510915933:122545..122861Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1510915933:121872..122051TCONS_00072788-exon-scaffold_84-1510915933:121872..122051Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1510915933:120949..121086TCONS_00072788-exon-scaffold_84-1510915933:120949..121086Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1510915933:118305..120441TCONS_00072788-exon-scaffold_84-1510915933:118305..120441Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1491911889:124835..125967TCONS_00072788-exon-scaffold_84-1491911889:124835..125967Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1491911889:123669..123853TCONS_00072788-exon-scaffold_84-1491911889:123669..123853Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1491911889:123121..123270TCONS_00072788-exon-scaffold_84-1491911889:123121..123270Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1491911889:122545..122861TCONS_00072788-exon-scaffold_84-1491911889:122545..122861Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1491911889:121872..122051TCONS_00072788-exon-scaffold_84-1491911889:121872..122051Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1491911889:120949..121086TCONS_00072788-exon-scaffold_84-1491911889:120949..121086Clytia hemisphaericaexon
TCONS_00072788-exon-scaffold_84-1491911889:118305..120441TCONS_00072788-exon-scaffold_84-1491911889:118305..120441Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072788-proteinTCONS_00072788-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_84supercontigscaffold_84:118305..125967 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.89247	1.85509	0.958149	0.741249	22.5747	16.6186	13.7633	16.3625	8.57247	11.9728	8.78507	8.42289	8.89465	9.78103	3.40325	4.89151	3.56919	3.57419	19.8842	13.6443	6.34811	6.0654	3.12867	4.55054	30.5718	26.7677	4.79219	5.66928	2.57973	2.40903
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR028933Lebercilin_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072788 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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