TCONS_00072929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072929
Unique NameTCONS_00072929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2903

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072929 ID=TCONS_00072929|Name=TCONS_00072929|organism=Clytia hemisphaerica|type=transcript|length=2903bp
CATAAAGTTTCATAGTGTACTCTTGATGGATGGCATGAAATTATCTTAAA
TCGTTTTATTTACTCAAACTAGTGATAAATTATCATATTAACGTTCAAAA
TAGCTCTCTTAGGGGTAAAGTGATATTTCACTTCCTAGATTTTGCAATTA
CATTTCttacatgtatctattttttgacagattttgatTTTCTAAGAGAG
CAGAGGAAACAAGAATTCAATCTCAAATAATCAATCTATCACTCACACCA
TAGACTACTAcTCGAACCGAAATTCAGATGAAATTTGACACACGTGTATA
GTACTAAATTCTTGCTACAGCAATTTTTGGGTCGCGAAGTTCCATCAGAC
TTGAAATGTGGCTTAACAAACTGCTTTTATCATTTTTGGTTTTAGgaCAA
TGTTTACAAGAAAGTAATGGATCTCATATTCCTTTACCTACAACTCGCCA
CTCAACTCGCTCGACTCGCCAAACGACGCCAATTTACTCCCATCCAAGAA
CCTTGAAAACTTCTCCATTAACAACGTTAAAATGGACACGTTACAAGAGA
TCTTCTCGCGCCACGAGCTTGAAATCTACTAGACATACAACATTGAGATC
CACCCGCGCAACGACTTTAAGGTCTACGCAATTTAGAAATGCAAAGTGGA
CTAGAAGATTGACTCGACGAACAGCAAGACTAAGATCTACCTTAAGATCA
ACTAGAAAACCAACTTCGAGTTTTTCTCGAGCAACACCGCCAAAATCGAC
TCGAAGACCGACGCCGAGATTTACCCGTTCTACCACCTTAAAATCAACAC
GAAACCCAGTTCCTAGATCAACACATGCAACACCGCTAAAATCGACTAGA
AAACCAACTCCAAGATCTTCTCGAGAAACAACTCTCAGATCGACTCAAGC
TTCGACATTAAAATCACATAAACAACCTTCTCCGAGGTCCACTCCAGAAA
CAACTCTCAAATCGACTCGAGCTTCAACATTAAAATCGACCAAGCAATCT
CCTCCGAGATCTTCTCGAGCAACGCCGCTAAAAACGACCAAGCAACCTCG
AACTACAATACTAAGATCTACAAAACGTGTGACACCAAAATCAACGCTAG
AACCATCGATCCAACCAACAGGCACTGTATCGTCGAGATCAACAAAGCCG
AAAAGACCAAACAAGTCAACAAGCCCTACCAAAAGACTCACAACTAGTTA
TGCCGAGAATAAGAAACAACTGGCTGATAAAACCACAAAAACGCCAAATG
GCAGGAATGAAAGACGTTCTCCGCAAGTTGatGCAGAGATTCGAAGCCAT
CCAGTGTTCAACGTTTCAGTGCAAGAAGGGCTACAGAATTTGAGATCGAC
GTTGAATGATTTGAATTCGACTGATGGGAATATTATAAGTGGTTTCGTAC
AAAATGCGTCAGTTTTATTGGCTAAAACACAGATGGAAAATGAGGAGGAT
CTGGACTCAAAATCGGAACATGATGAGGGGATTGAAATTATTCAAACCTT
AGAGAAGCTTGGTGAACAAGTTTCAGGGCTACTTGAAAGAGAATTGGAAA
AAGGAGACGAAGACAGAGCTGATATTCAAATTTGGTCATACTACCTTGTT
TTTGGAGTAGCAGTGGCTAAACCAGTCTCATTCGAGGGATATACCTTCCC
TAATACGACACAAATTAATAATCAAAGTTACGGAGTGGAGGGGAACAGTA
TCAATTTACCGaccaatattttcaaatacacAAACCTAACACAGCAAAAT
TATTCTCGTATCATATCTTTGGCATATAACCCAACTAAGCAAATGCTGAA
TGCAACTTCAAGAGGAAGAAAAGTTGGTGGTGGAAAGATCATATCAACAT
CAATTCATCCACCAATCGTTCAGGCATTGTCTGGCAACGACCAAATCATC
ATCACTTTAGAGACCATGGACGAGCAATCGAACGCAGAATGTGTTTATTG
GAACTATACAACGAATAATCACAAAGGTGGATGGTCGAACTTTGGATGTC
AACTCGACCCAGACTCTTCAAATGAGACGCATGCTGTTTGCGTTTGTAAC
CATTTGACCGATTTCTCAGTACTGATAGACGTTGCTGGTAATGATTTGGA
CGAGAGGAATAAATTGGCGTTGGAAATGATCACAAAGATTGGATGTAGTA
TCTCTatattctttttgtttgttACCATGGCGATTATCTTATTATTCAGa
aatattCGCAAGCAGTTCCGTTATCGAATCCACTTTCACCTTTCATTAGC
ATTATCTCTGGCCAACATTGCATTTCTTTTGAACGAAGTGGCTCTTGCAA
ATCATGAGGGTTGCTTGGTCGTATCCATTGtcacattttatttttacatg
gCTGCATTCTTTTGGATGTTATGTGAAGGGATTTTTATTTGGCGTGCTTT
AGTGAGTGTGTTCACGGAAAAGGATCGTTTCGCGGCCTACATGTTGATTG
GCTGGGGCACGCCATGTATCATAGTTACCATAACAACTGCAATCAAATAT
GATAATATGACCAGTGAAAATTTCTGTTGGTTACCGTTGGAAGATGGTGT
TTTGATGAGTTTTGTGGTCCCTGCCATCGTTGTCATATTTGCAAATTTGA
TCATTCTATCGGTGACATTGAAGATTGCTGGTAAACATGCAGAAAAGATG
GACCAATCGTCTACACTAGCCATGGCAAGAATGACTTTACTATTGCTGCC
GATCTTTGGAGCCACATGGTTATTTGGTGTACTGGCGATCAATAACGAGA
CACTGTTCTTCAAATATATATTCACCATACTCAACACTCTACAGggtTTG
TTTATATTCATGGTTTACATTGTCCTAAGCAAGGAGaCACGACTTGAGAT
CAAGAAACGTCTATCTAATCCATATGCTCTCGCATTATTCCACAGATGTT
CAT
Run BLAST on NCBI

protein sequence of TCONS_00072929-protein

>TCONS_00072929-protein ID=TCONS_00072929-protein|Name=TCONS_00072929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=849bp
MWLNKLLLSFLVLGQCLQESNGSHIPLPTTRHSTRSTRQTTPIYSHPRTL
KTSPLTTLKWTRYKRSSRATSLKSTRHTTLRSTRATTLRSTQFRNAKWTR
RLTRRTARLRSTLRSTRKPTSSFSRATPPKSTRRPTPRFTRSTTLKSTRN
PVPRSTHATPLKSTRKPTPRSSRETTLRSTQASTLKSHKQPSPRSTPETT
LKSTRASTLKSTKQSPPRSSRATPLKTTKQPRTTILRSTKRVTPKSTLEP
SIQPTGTVSSRSTKPKRPNKSTSPTKRLTTSYAENKKQLADKTTKTPNGR
NERRSPQVDAEIRSHPVFNVSVQEGLQNLRSTLNDLNSTDGNIISGFVQN
ASVLLAKTQMENEEDLDSKSEHDEGIEIIQTLEKLGEQVSGLLERELEKG
DEDRADIQIWSYYLVFGVAVAKPVSFEGYTFPNTTQINNQSYGVEGNSIN
LPTNIFKYTNLTQQNYSRIISLAYNPTKQMLNATSRGRKVGGGKIISTSI
HPPIVQALSGNDQIIITLETMDEQSNAECVYWNYTTNNHKGGWSNFGCQL
DPDSSNETHAVCVCNHLTDFSVLIDVAGNDLDERNKLALEMITKIGCSIS
IFFLFVTMAIILLFRNIRKQFRYRIHFHLSLALSLANIAFLLNEVALANH
EGCLVVSIVTFYFYMAAFFWMLCEGIFIWRALVSVFTEKDRFAAYMLIGW
GTPCIIVTITTAIKYDNMTSENFCWLPLEDGVLMSFVVPAIVVIFANLII
LSVTLKIAGKHAEKMDQSSTLAMARMTLLLLPIFGATWLFGVLAINNETL
FFKYIFTILNTLQGLFIFMVYIVLSKETRLEIKKRLSNPYALALFHRCS
Run BLAST on NCBI

transcript from alignment at scaffold_86:918357..933673+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072929 ID=TCONS_00072929|Name=TCONS_00072929|organism=Clytia hemisphaerica|type=transcript|length=15317bp|location=Sequence derived from alignment at scaffold_86:918357..933673+ (Clytia hemisphaerica)
CATAAAGTTTCATAGTGTACTCTTGATGGATGGCATGAAATTATCTTAAA
TCGTTTTATTTACTCAAACTAGTGATAAATTATCATATTAACGTTCAAAA
TAGCTCTCTTAGGGGTAAAGTGATATTTCACTTCCTAGATTTTGCAATTA
CATTTCttacatgtatctattttttgacagattttgatTTTCTAAGAGAG
CAGAGGAAACAAGAATTCAATCTCAAATAATCAATCTATCACTCACACCA
TAGACTACTAGTAAGTAAAAGCTTGTCTGGACAAAGGATTAGTTGgaaag
aaaattgacaaaatacgTTAATACGTTAAATACATTACGTATCAAAAAGC
TCTGAATTTTTTAAGTCAATAGGCGTGTCCAATTGTAGCAACAGTTTATA
CTCTCCAATTCGAtcttctactattcgatacgctccattacaGTAGACTT
CCGGTTACTCGAAGCTCCAAGGGGGTAAGAACtcacttcgaataaccggg
agttcgAAATTTAAACTTTGGCTTATTTGAGCAatatacccccttctcac
agacctggtaggattttcTCAGCCAGTGGAAAGatacataatattttgca
gtgagattggtttatttgattattttcagtggggaggatgattttccacc
ggggacgatattctggccaatttttccagtggaaagcgttccaagtgggt
ctgtgagaaagggaaTGAAGGGAATACCAATCAAAGATACTAGACAACCA
CTCATTTCTGGTGATATTTAAGCTATTTAAATCCAGTTATAATGGACTCA
TCTCCTACTTCCTTCCTTGTGACAAGAATTAATGACCAGGCCTTGAGAAA
AATATTGTCTAGCAATCATATTTGGAGGTGTTTAAGGATGCATTAGTGCC
GTGCGTTAGTTACAGTTGAAAAAATATTGTATAATttgcacgcttttttt
ataagaatggttttTTCCcaattcatcatggatattAATAACTTTTATGG
GAACAAATCATCCTAAAATGTTTTTACGATGTTCTTTTAAGTTAGAATCC
AAATTCAAcctaaatttaaaattaatatATGTACCTGAAGCATAAatctt
ttgtgaaagtattGGATAGAGCCTTACTGGGGATGATTGGCAATTTAAAG
TTACATTTGCTataatgctctaaaaatgacattctttagTCCAGTTGCCA
TATTACATGATGGTGTTATGATATTCTTGTGGAGTTCATTCTTGTTGAAA
AAAGCGTATTTTAAAATTAGTTTATTTGCTCAATCAATCTTGCAGACAGA
CTCGTATATTTTTTTCCTCTAGATGTTTAGAAATGGTTTCACTTTTGCTT
AATCCATTTTTTGTCAGAGTTTtcatttagtttttatttttgtgtcaTGG
AGATTTGTCTGCAGGCGTTAAATCCTTGTTAAagcttactcttaggttcc
aaataaaccccccggaccttattaggacccccccgtttattaatctctaa
gaagattttcagctttcaaagagaaggccccttattttgctctaaatagc
ctgattttagcctatttttaccttatttttgagNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GTTGGCTGATTTACACCACTCTGGTATGAATTAAACCGAATTCTAAGCTT
GTTAAAGTTGAGAACGATTTCACATTgatgattttatattttttacagaT
AACTTGGGGGAAAGGGAAATTTGGGGGAAAAAGTTATCTACTTTATGCAT
ATCAGTAAAAGAATTTCTATCAATATTTATCCCCACATTTTCCATATATG
TTGGTTTTTTCAATATCAGTAATAATGCATTTCAAAATGTTGTGATATAT
AATGAACTTTTATTCTCTTCCCAAAAAGTTTCGCCAAAAAAACAACGACA
AGGTTCTTGAGGTTCgctttaaaatatcaaaaattaacACGTTCCTGTTA
TTCCAAATTTTCTTTGAGTTTTCCTAAATAGCTAAATAACTCTACAAGAC
TCGATAACTGAATCAGGGAACATAgtatttgaatgtttttgtttgtttca
gcTCGAACCGAAATTCAGATGAAATTTGACACACGTGTATAGTACTAAAT
TCTTGCTACAGCAATTTTTGGGTCGCGAAGTTCCATCAGACTTGAAATGT
GGCTTAACAAACTGCTTTTATCATTTTTGGTTTTAGGTAAGAGTAAAATT
TAATGTCTTCTTAAGCATCAATCTTCCATTTTTGGTAGTATTGATATCTC
CAGGTTTAGGTCatacaagagccgcaaagatacAGATAAGATAAATTTTA
TAATATTGCAGAACGATAGTAAGAATGCGAAAATGCTGTCAGTCATTCTT
AAATTCGATTTGCTACAGATCTATTTAATGTCATTCTTGATAGGGATTAT
TCAagtttgaataaatattttttcaggaCAATGTTTACAAGAAAGTAATG
GATCTCATATTCCTTTACCTACAACTCGCCACTCAACTCGCTCGACTCGC
CAAACGACGCCAATTTACTCCCATCCAAGAACCTTGAAAACTTCTCCATT
AACAACGTTAAAATGGACACGTTACAAGAGATCTTCTCGCGCCACGAGCT
TGAAATCTACTAGACATACAACATTGAGATCCACCCGCGCAACGACTTTA
AGGTCTACGCAATTTAGAAATGCAAAGTGGACTAGAAGATTGACTCGACG
AACAGCAAGACTAAGATCTACCTTAAGATCAACTAGAAAACCAACTTCGA
GTTTTTCTCGAGCAACACCGCCAAAATCGACTCGAAGACCGACGCCGAGA
TTTACCCGTTCTACCACCTTAAAATCAACACGAAACCCAGTTCCTAGATC
AACACATGCAACACCGCTAAAATCGACTAGAAAACCAGCTCCGAGATCAA
CTCGTTCAACACCACTAAAATCGACTAGAAAACCAACTCCTAGATCAACT
CATGCAACACCACTAAAATCGACTAGAAAACCAACTCCGAGATCAACTCG
AGGAACACCGCTAAAATCAACTAGAAAACAGACTCCAAGATCTTCTCGAG
AAACAACTCTCAGATCGACTCAAGCTTCGACATTAAAATCACATAAACAA
CCTTCTCCGAGGTCCACTCCAGAAACAACTCTCAAATCGACTCGAGCTTC
AACATTAAAATCGACCAAGCAATCTCCTCCGAGATCTTCTCGAGCAACGC
CGCTAAAAACGACCAAGCAACCTCGAACTACAATACTAAGATCTACAAAA
CGTGTGACACCAAAATCAACGCTAGAACCATCGATCCAACCAACAGGCAC
TGTATCGTCGAGATCAACAAAGCCGAAAAGACCAAACAAGTCAACAAGCC
CTACCAAAAGACTCACAACTAGTTATGCCGAGAATAAGAAACAACTGGCT
GATAAAACCACAAAAACGCCAAATGGCAGGAATGAAAGACGTTCTCCGCA
AGTTGGTAGGAAAATTTATTCTAAGTAGTACACTATGCATTTTAATGTTC
AGACGTCACGGTTTAGCATCGCTTCGGTATGGCTTTTGTTACGGATATTT
GGTTCTGGAACAAATTtagagcagttccgttccgaccAAATAGTGAACTG
TTTCGATCCGTTTTGCATTGTAACATCTTTGTAACGTTTTTGAGGTTGAC
ACTAATAAAATTTTTGTATCAACACAGTGTCCAAACAATTTTATTCTCTT
AAAGTCACTACTCAAATATCACCAAACCGTAAACAAAGCTCTTCTAACGT
TGAAGATTAACCGCTAGCTTTCACTTATCTCTTATTGCGTAATGGGATAT
TCCAGAAATAATCTGTGTACACCTTATTTTTAGGAGCTGTGACACCAAAG
ATGGTCTCATCGCTTTACTCATAAAACAGATTGATCGAACTTCGATTCCa
tctacattttttattttaacagatGCAGAGATTCGAAGCCATCCAGTGTT
CAACGTTTCAGTGCAAGAAGGGCTACAGAATTTGAGATCGACGTTGAATG
ATTTGAATTCGACTGATGGGAATATTATAAGTGTAAGAAATTCTTTTGCA
GTTTTTTATGTTTCTAAATTGACGCCATAATACGCCGTTCGGTCCTTTAC
AGCCCTTTACTGTATGATGTGCTTATATGTGTAGACATTTGACACGTCGA
ATCCTGTTTAAGTCAAATTCGAACCCTTTGTTGGAGGCGTGATGCAATGT
TGTAATATAGTAGACCTTTGATTTTGCTACATGCGAAAATTATATTGTAG
TCAATATTGTATTTCTCTATATCTGCTATTAGAACAATgctataagaaca
caaggcggGGACACAAGGCTAAAATTTTCTTGTGATAATTTCAAAACCGA
GTAATGATCACTTTTATTTGTAGGGTTTCGTACAAAATGCGTCAGTTTTA
TTGGCTAAAACACAGATGGAAAATGAGGAGGATCTGGACTCAAAATCGGT
ATGCTTTTCATGCTTTTTCGGCTTAGACCCTTCCCATAAACTGGAATATT
TATCAGGAAGTTTTCATACTCTTTAGGGAAATCTCATCTAGCAATACATC
CCCATCgaaaataaaatgattgaaatttttgagcaaaattaACCAAATGG
CTTCTTGACCTAAAGACAATATATTTGTAGTTCGAATTCTGATGaacatc
tttattttatttgagtGGTAAATTTCCCACGGGGCACTGGGACAGAGGTG
CGATTGAATGATACTGGACTTTATATTTATACTGGAGATTTACAAActga
ttattttcttctttttccttaaGGGGccagtgccgtaaaaaatcgtTAAT
AACCCCGTCAAGTGTCCAAGTAAAATTCTTACTTTCTAAACCATAGGAAC
ATGATGAGGGGATTGAAATTATTCAAACCTTAGAGAAGCTTGGTGAACAA
GTTTCAGGGCTACTTGAAAGAGAATTGGAAAAAGGAGACGAAGACAGAGC
TGATATTCAAATTTGGTCATACTACCTTGGTAACAATTAACTAAACTCGT
GGTAAAAGGGTCAAAATGCCGTTTTCCTCAAAGAGTAATATCTTTTGAAG
CAGAAACCTTTGctttttcatgatatttttggAATCCACGTGGAGCGTCG
ATTGAGATACAATTCTTAGGCATTTGAAGCAATCTTTCGATTCCAAGagg
tcaaattttcaatttctgggAAGCGCTCGGTAATCGTGTTAAAGTAGTCt
agttttaagaaaatttattagaatgaaaattttaaccaaccaaatttttt
attCATCCAAATTTCTTCGTTTCGACATCTTCACTatcgtttatattttt
ttaattttcattcttgTAGTTTTTGGAGTAGCAGTGGCTAAACCAGTCTC
ATTCGAGGGATATACCTTCCCTAATACGACACAAATTAATAATCAAAGTT
ACGGAGTGGAGGGGAACAGTATCAATTTACCGaccaatattttcaaatac
acAAACCTAACACAGCAAAATTATTGTGAGTTCCTGGATATTGTTCTAAG
ATTTTATTCACAGTTTTTATATGAAGATAAATAAAATTGGGATTTAACCG
CTTAACTTTTGTATCTGAACCAAGACCCCTTAAGGGTTAAATGTTTTCTG
CTATCGATCACGAGTTCCCAACACCTAAAACTTTAGACAGTGTTGATATG
atattattttgtattttgctCTGCCACAGCTCGTATCATATCTTTGGCAT
ATAACCCAACTAAGCAAATGCTGAATGCAACTTCAAGGTAAGTGGTAAAC
TTTAAAGGTATATGGATTTTGATGGGCACAGGATAATAAATCAGATCATT
ACTTACAGTTAAAGAAACTGATTTCTCGATAAATTTCTCCCCTCCATTCA
AAGTACCTTAAACGAAGAAATATAATTTCGCGGTCTTTtcacaaatccgc
gaaattgaattccgcgaaacacaaatattctcaggatttaaaaaatcacc
tctgaaattattctttttagggcaaaatagcccaaattgtaaacaaaaaa
ctctctcaaccgcgaaattaaattccgcgaaaatttcttcccttaggATA
TACAAGTATAACAACCTGAAATCTTAAATTCTTTTAGAGGAAGAAAAGTT
GGTGGTGGAAAGATCATATCAACATCAATTCATCCACCAATCGTTCAGGC
ATTGTCTGGCAACGACCAAATCATCATCACTTTAGAGGTAAACCTCTATT
TTATcatagctcaagaaaaatcgtcatttttgatAATCTTTCTCATTAAT
GTcggcttgaaaaatgtttcatcaGGGGAAGTTTCGTTACTTACCTAAAA
AGTTTCTTCTTTAAACGAAGGTGTACTTTAgtgggattaaatttcgctgg
TTTTACGGATTTGGCTgtaatccgcgaaattaagtcccaatagAAATTCG
GAAAGGCGTTATCCACGaaataattacttttaaaatgtttactggcatca
aaNTTTTATcatagctcaagaaaaatctcGACAAATCTCAAACAACTACT
TTTAAGTTGTTTACTGGCATTAACGAAGCGCTGATAATGCGTATTTCGAC
CACCAACATGAATAATTATGCGTAAAAAGGCACAAagtcgtgaaaatatt
gtctctctatagtgccatccgcgaaattaagtccccgtgaaattttagca
ttttgttAATGAgttcaaccgcgaaatttaatcccctcgcaaatttatcc
cattaaagtactagATATACTAGCATTTCATGAGGCTAAACACAAGGTGC
AGACACCTGCTTACAAAGAAACATGATCTACAGATATTATATAAATCGAC
TCTCCGCTAttccattttttttcattttcggtGGTACCCCATTGTTCGAC
TTAAGTTTGACCATCTTGCCTTACCTTAACTACAGTTAAGTAATTGATTT
CATATTCAGACCATGGACGAGCAATCGAACGCAGAATGTGTTTATTGGAA
CTATACAACGAATAATCACAAAGGTGGATGGTCGAACTTTGGATGTCAAC
TCGACCCAGACTCTTCAAATGAGACGCATGCTGTTTGCGTTTGTAACCAT
TTGACCGATTTCTCAGTACTGATAGACGTTGCTGGTGTAAGTATAGCCTA
ATCTTTCTTGTTGACTTTTTAAGCGATAGATAAAGTTTGACTACAGCTTT
AATATTATTTGTCAATATACTCTCGAGTATTGTTGGCATCGACAATAATT
GCCATGTAAATGGATTTTGaaggaaatttaatttttccaacGTTAAATGT
GTTCCACATACGATTTTTGTTGCAACATATTAACATTTACTCCAATCTAG
TGAAGACAATTTTTAAACGGGGTGCAAATTCCAGAGAAGATTTCTTTTCG
AGCGCTTAAAAAGTGCCTTTCCGAGAAATTACCAACCACGATTGGAGTCT
ATGCCCGATTGAACCGCCTCTGTGGGTGCTACCGAACGGGGTGGTCATTG
ATATCTTTGATTTCTGGTGATTTCTATAGTATTTCTTCCTTCAGAATGAT
TTGGACGAGAGGAATAAATTGGCGTTGGAAATGATCACAAAGATTGGATG
TAGTATCTCTatattctttttgtttgttACCATGGCGATTATCTTATTAT
TCAGGTAAGCCGTGATTTCAGCTGAGAACAATTTATGAATGACAACCatc
taaaatttcttttctcaaACTTTTTGTTCCAGTAAAGAGGCAGAACTTCT
TCTTTCAGAAGTTCTGGAACTTTTAAGCTACTTTAAGACTAAGGGTAGAG
TTCTACAGGTTCTAGGGTTGTTGGTTCGACCCTCTGCTGGATTTTACAAA
TTAGATTAATAACTTATAATGACTCTTTGCTTAGTGAACAGTAATTTCAA
TAATGATTGGTGCCTTTACCCGGTTTGGTAGCTATCGATAAACAGGCCTT
AAGGTTGTCTTTACATACTTTTAAAGCCTTTTTCGCAAAATGTTGTATGG
TAAACCTTGTATTTGGttttcatttagaaatattCGCAAGCAGTTCCGTT
ATCGAATCCACTTTCACCTTTCATTAGCATTATCTCTGGCCAACATTGCA
TTTCTTTTGAACGAAGTGGCTCTTGCAAATCATGTAAGTATCTCATTAGG
TGTTGACATGGGATTTATTTGGTCCATCAAAATGGCGCActtctttaaag
gttttgtttttaaataggagtgatatcgtttgcgtactcatcaattttaa
ttcacaagctttttcacattggattgacaaagatgtggagcaagatacgt
cagacactgtcctgatatgaaatatgtgtctgatatgaatatgggacact
tatgtaaaaataaaacctttaagtttaAGCAGAGGCCTTTTTCGTTAAAC
CTAACATATTTCGATTTATGGTAGTGATCCTGAAATTACACTTAACTTTC
AATGTAACTTGAATCTTTAACGACTAAATGACGTTATCTAAAACTCAGTA
TTTCGCACTACAGGCCCGCCGGCGGAAGCGGAGAGACTGAGGAGACTTCA
ACCTCCCCACTTTTCAGCAAATGATACTGTTTTCTCAAATTCCGAGTGGC
TTTTATCTCATTTTAAGCCTTCAGCCTCCGCACtttaacggttgttccgc
cgggcctgtacTATGATATATTATTTGAGATACCCTCTGCTACAGAGTAT
TCTCTTCACAAGCTCCCCATGTCTCGAAAAATTTGCTTGTCCTTTGTACA
TTTGTGTTATAGAGCtgcaaattttgcaaatttgaatATGCTCTTGAACT
TTACtgtaaaaaacatgtttttatatACTATANGAATACTCTGCCCTTGG
ACTGTGCtgtgaaaaatatgtttttaataTGCTTTGCAGGAGGGTTGCTT
GGTCGTATCCATTGtcacattttatttttacatggCTGCATTCTTTTGGA
TGTTATGTGAAGGGATTTTTATTTGGCGTGCTTTAGTGAGTGTGTTCACG
GAAAAGGATCGTTTCGCGGCCTACATGTTGATTGGCTGGGGCACGCCATG
TATCATAGTTACCATAACAACTGCAATCAAATATGATAATATGACCAGTG
AAAATTTGTAAGTATAGTAAATTTTCTAATAAGCGGTCCCTCTACAAAAA
GCGGGCATTACTTTATTCCCTTCTAACTTCTCTTATTAATACTCTTTAAT
AACGAGCGCACTGCTGACTCTGATAGTGCCCACCAATTTGAGATCAGATA
CTCTCTTATCGTTTTATAATATTTACCTTAATCATCATCTTTCGACCGCG
GTCGAGATGATGGATTCCACCCTCTGGCGCCAAGAATCGCGGTCGCGCAT
GGCAGTCTCCAGGTCACTATAATGAAGTCCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGATGCACGAAGGCAATGACCAGCAAACTGAACACGTCTAGC
CTTTAAGATGTTTGAGATAGGCTTAATCGAACCATAGATGGTGTTTTTAG
TGGGATGATCGCACCAGGAAAGTTTTTTAACTCTTCTTAGAAGGTGTGTG
TATGTTCCATCGAgttgtttttctaattttacGTGTGAAGGACCACGTTT
CCGAACCATAAAGAAGGATAGGTTCTATGGTggatttaaaaactttaatc
ttAAGGTTAGAGTCAAGAAGAGAAGATGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCGCCcactacga
aaaccattttggtttttaCGAAGAATGGGTTCGACTTTAGACCTAATCCT
ATTGAGTAAAAGTTTGTTGTAAATCTTGGCCGATATTGGAAGAAGAGATA
TACCACGATAGTTAGTAGCAAGAGTGAGGTCTCCCTTTTTCAGAACAGGA
ATGATATGAGATTTTAGCCAATGATTTGTGCAAACATTTTCTTCGAACGC
GATATTACAGAGATTAAGAAGGAAACTGTGGAAGTTTTCGTCTTTCCAGA
TACCTCTTACCTTAATACCATTGGTACTTTAACTTGATGGGATTAGTTTA
GCTGACAACCATGTTGTAAAAAAGGTCTTCTGGTTGTACAGTAGAGATTC
CATAActggaacctctataactcgaatgtatCTTTAATCCTAACTTTAAT
TCGgtcaagttttctcgtcccttcagccAACAAACCCCTGAACACTAATC
TCCATAACTCTTAATTTCCAAATCTTGAACAAATTTTGTGTCCCCTGTGC
GTGTTCAAGTTATGTAGACCCGTATATCATTTCCTACGGCGAGTCTGGCT
TGCAAACTTTCTCTTGCTACATCTGATTCTGTTACTTGACCAAAAGAATT
AAATCAGTTTTAAATTCCTTTCCAGCTGTTGGTTACCGTTGGAAGATGGT
GTTTTGATGAGTTTTGTGGTCCCTGCCATCGTTGTCATATTTGTGAGTGT
AATTATTACAGAGCTTTGCCTGTACCAGACGTGCACGGCTCTTTTCTCGA
CACTTCCATCtgtaactttttaaaaatatcctCAAGGATTATGGGGATTG
ACGTCACTTGAAGTCatcggttccgtttcgctccgaaacaaaatgaagcc
attttaTTGGTCAGAAGTAACATAAAACTTGAATTTAGCCGATAGAATGg
attcatttcgtttcggagcgaaatgGAACCGCGTAGCGTGTGAACGTAGT
CTTAATGGACATCATTcccaattaaataaaaaacacgtaaaacaTAATCC
ACATAGGATAAGGCTCTGCTTTATCTGGATATTTCTACCTTAGAGTATTA
GAGGTAATATATGCTGGGTGTTCATAGTCCTGATACTGAAAGTTTTTATA
TGTAGGTGTATTATAGGTTGTCGAACTAACTCAGTTGAAAATACTCAACA
CttttttctgcactgctctatatattcccatgcgagACAATCTCTGTTCG
ACAAACTAGAAGGCTTAGGTATTGTTTTTCTCCCACTAAACCCTTCTTAT
TTTTGttggcttttattatatggtaGATTTTACAAGCGATTTCAGAATAG
ATGCTACAAACATACGATCCCTAAGCAATCTCAAGTGTAAAGAAAACTTT
AACCCAGGTTATTTATCATTCTGTCACAGGCAAATTTGATCATTCTATCG
GTGACATTGAAGATTGCTGGTAAACATGCAGAAAAGATGGACCAATCGTC
TACACTGTAAGAATGTTTATGTTTCTATGTTTACATCATATTCCAAATCC
TTCTTACAATAAAAGGATTGTATCTTTTCTAACTCAAACGATCAATATTT
TCTTAGCAGCCTGACATACAAATAACCCTCCATTTCCCCATTCTACTCCC
CCCTCCCCCAagaaattgcctgttttttagTATCGATTTCCAAAGTTTGT
CATCTTTCTTATAAATGTTAAATTTGTCATCAGTTATATTGTTTTCTTAC
TCAGAGCCATGGCAAGAATGACTTTACTATTGCTGCCGATCTTTGGAGCC
ACATGGTTATTTGGTGTACTGGCGATCAATAACGAGACACTGTTCTTCAA
ATATATATTCACCATACTCAACACTCTACAGGTAAAGGCCCAATGGTGGC
TCCCTAGTCTTGGCTTTTAGACTACCATTCTTTCAACACTGAAAATAGGG
TTTCTATGAAATTGTTGTACTTTTATAAAGGGAAATTGAAGATGATATAG
CATGTATCATATATCTACTTTTAACCAAGAAGTCTGAAACACCATCATAA
GTACTGGACTAACTTTTGTTTGACCTGACATTTTACACTACATATGAAAG
AAGGAAGATATccgatattttgaaataattttgttttcattttcagggtT
TGTTTATATTCATGGTTTACATTGTCCTAAGCAAGGAGGTAAGATTCGTC
ATAACCTTACCTAGTCCCTCTGAAAGATAGATCCAGTTATTTGACGGGAA
ACATCTTACAAATTTACACCTTTATCTCATTTCCAAATGGTAATTTATAG
TCAGTGTGGATGGAAATTCCCAACAAGATCCCAATGGTGATCCCTAAAAG
CCAGTAAGGATagctttgaaagactttggatTTCATTTCTGATTAGATGA
GATTACTACTGCAGTTCCAATGGTATGATGTTAAGGTTGAAGGGAATTTT
TCTCAGCAGGTAAGAAGGGGATTGATTTGCTTTActattattttctttta
gaCACGACTTGAGATCAAGAAACGTCTATCTAATCCATATGCTCTCGGTA
AATCACAAACTGGCATTACTAACCCAACATTCAGTGCAtctcaaaccaaa
gaaaaatgaGTTTACCATTAACGTTGTGAAGTGTAGGAAGGTAGTAAAGG
CCGACAAATCAACGGTATAATTGGTTAACATATACAAGCTATTGTTACAA
ATATACTTTAACGTTAGATGTAAAAGTAGTAcacaaaaaatggacaaaaa
aagttGACCCAGGGCTTTTTCCCGTCCAATCTATTTATTAACATTAGGTG
GGTGATGTTGAACATCATGTGACAGCTTGCTTAACTAACAAACAAtacta
ctcttaggttccaaataaacggcccccccccccgcttgttaatttttcga
aaattttccaaccccccccccccccctcNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NccccccccccccccgtttattcgaaccccccgtttatttggaacccaAG
AGTAATTTTAGATAGTAAATAaaggtttgaaaaaatattaaccTTTGAGT
TACTCTCTCTACTTCGAACCTTTATAATTCAAAGAAGATTCTTCGTTCCT
cgaatatcgaattagagagactcAACTGTTGTCAACATTGAGGtgtacac
tcattttttttataagcataacgtttacaagcatactgaagctcaaattt
ccaaaaaaaatacgcatatgctaagcatagcttgaggctcagccaaaatt
ttttttagaatcataatttccaaaacttcagaaGTGTCAAGAAGTGTACC
AGATTGTTTTTTAAACATGAACACACAACTATAAAGATTCGAAATTATAT
GGTTaacatttgaaaacaatagaatgtcttcatttttctcaAGATTAAAG
AGGGTAGAATTTGCGAATATTTTTACCCCCCCCTCCCcgcttcataattt
ttttaccaagcatagggttaagcataagtcgaggctcaaaattgagcttt
acttaagcatagtgagcttcagctAAAATtaaccgtatgcttataaaaca
aaatgagtgtatgAGTAGACGAATGAGCTAGTTAAAGCAGGGCTTTCTGG
TTCATTCTTCGTCTAATGGAGATATTGAGCGTACctcaaaaactatttta
aaatattcttaaaaaggttcttttttgtagaaataagtaaaatttattta
aagctatataaatataatttaaaatttaaggtatatatacaatttttaac
taaaatgttttctattgaatttcaataaTTATTTCCCGGGCTAATTATTT
TTGTTCGAAAGTTTGAAATTCTTCCATCAAGACCTCATATTCCTTTTTCA
ACGATTTCAAATTGTCCTGTACTTCATAAATGCGTTTCCAGCCTAAATCT
GTATCATCTGGATTTCCTAAAATTCCATCTATGCCAAATTTAGAGTTATT
TTCTTCTGGGAATGCGACTTTGTCTACTCTGAAGTTTTcatcttcaataa
tttttttgtattcgTCAGTTTCTTTTAGTTTAGGATCGCTtcgtttaatt
tttaattttcgtgcTAGGCTGTCGATCTTTTGATCAGAACTCCACCAGTC
TTTCGGGCCACCTTTAAAAGCTTGTTCTGACCAATCATGAATGACCATTG
TTGAAGGATTGAATACTGGTTGATTACAGGCGTTCCTTAAATTAATCAAG
TATTGTTGAGCTGTAAATTCAACCGGTCGTCTTGTAATCGTTTCAGCATT
ATTCCACAGATGTTCAT

Coding sequence (CDS) from alignment at scaffold_86:918357..933673+

>TCONS_00072929 ID=TCONS_00072929|Name=TCONS_00072929|organism=Clytia hemisphaerica|type=CDS|length=2547bp|location=Sequence derived from alignment at scaffold_86:918357..933673+ (Clytia hemisphaerica)
ATGTGGCTTAACAAACTGCTTTTATCATTTTTGGTTTTAGgaCAATGTTT
ACAAGAAAGTAATGGATCTCATATTCCTTTACCTACAACTCGCCACTCAA
CTCGCTCGACTCGCCAAACGACGCCAATTTACTCCCATCCAAGAACCTTG
AAAACTTCTCCATTAACAACGTTAAAATGGACACGTTACAAGAGATCTTC
TCGCGCCACGAGCTTGAAATCTACTAGACATACAACATTGAGATCCACCC
GCGCAACGACTTTAAGGTCTACGCAATTTAGAAATGCAAAGTGGACTAGA
AGATTGACTCGACGAACAGCAAGACTAAGATCTACCTTAAGATCAACTAG
AAAACCAACTTCGAGTTTTTCTCGAGCAACACCGCCAAAATCGACTCGAA
GACCGACGCCGAGATTTACCCGTTCTACCACCTTAAAATCAACACGAAAC
CCAGTTCCTAGATCAACACATGCAACACCGCTAAAATCGACTAGAAAACC
AACTCCAAGATCTTCTCGAGAAACAACTCTCAGATCGACTCAAGCTTCGA
CATTAAAATCACATAAACAACCTTCTCCGAGGTCCACTCCAGAAACAACT
CTCAAATCGACTCGAGCTTCAACATTAAAATCGACCAAGCAATCTCCTCC
GAGATCTTCTCGAGCAACGCCGCTAAAAACGACCAAGCAACCTCGAACTA
CAATACTAAGATCTACAAAACGTGTGACACCAAAATCAACGCTAGAACCA
TCGATCCAACCAACAGGCACTGTATCGTCGAGATCAACAAAGCCGAAAAG
ACCAAACAAGTCAACAAGCCCTACCAAAAGACTCACAACTAGTTATGCCG
AGAATAAGAAACAACTGGCTGATAAAACCACAAAAACGCCAAATGGCAGG
AATGAAAGACGTTCTCCGCAAGTTGatGCAGAGATTCGAAGCCATCCAGT
GTTCAACGTTTCAGTGCAAGAAGGGCTACAGAATTTGAGATCGACGTTGA
ATGATTTGAATTCGACTGATGGGAATATTATAAGTGGTTTCGTACAAAAT
GCGTCAGTTTTATTGGCTAAAACACAGATGGAAAATGAGGAGGATCTGGA
CTCAAAATCGGAACATGATGAGGGGATTGAAATTATTCAAACCTTAGAGA
AGCTTGGTGAACAAGTTTCAGGGCTACTTGAAAGAGAATTGGAAAAAGGA
GACGAAGACAGAGCTGATATTCAAATTTGGTCATACTACCTTGTTTTTGG
AGTAGCAGTGGCTAAACCAGTCTCATTCGAGGGATATACCTTCCCTAATA
CGACACAAATTAATAATCAAAGTTACGGAGTGGAGGGGAACAGTATCAAT
TTACCGaccaatattttcaaatacacAAACCTAACACAGCAAAATTATTC
TCGTATCATATCTTTGGCATATAACCCAACTAAGCAAATGCTGAATGCAA
CTTCAAGAGGAAGAAAAGTTGGTGGTGGAAAGATCATATCAACATCAATT
CATCCACCAATCGTTCAGGCATTGTCTGGCAACGACCAAATCATCATCAC
TTTAGAGACCATGGACGAGCAATCGAACGCAGAATGTGTTTATTGGAACT
ATACAACGAATAATCACAAAGGTGGATGGTCGAACTTTGGATGTCAACTC
GACCCAGACTCTTCAAATGAGACGCATGCTGTTTGCGTTTGTAACCATTT
GACCGATTTCTCAGTACTGATAGACGTTGCTGGTAATGATTTGGACGAGA
GGAATAAATTGGCGTTGGAAATGATCACAAAGATTGGATGTAGTATCTCT
atattctttttgtttgttACCATGGCGATTATCTTATTATTCAGaaatat
tCGCAAGCAGTTCCGTTATCGAATCCACTTTCACCTTTCATTAGCATTAT
CTCTGGCCAACATTGCATTTCTTTTGAACGAAGTGGCTCTTGCAAATCAT
GAGGGTTGCTTGGTCGTATCCATTGtcacattttatttttacatggCTGC
ATTCTTTTGGATGTTATGTGAAGGGATTTTTATTTGGCGTGCTTTAGTGA
GTGTGTTCACGGAAAAGGATCGTTTCGCGGCCTACATGTTGATTGGCTGG
GGCACGCCATGTATCATAGTTACCATAACAACTGCAATCAAATATGATAA
TATGACCAGTGAAAATTTCTGTTGGTTACCGTTGGAAGATGGTGTTTTGA
TGAGTTTTGTGGTCCCTGCCATCGTTGTCATATTTGCAAATTTGATCATT
CTATCGGTGACATTGAAGATTGCTGGTAAACATGCAGAAAAGATGGACCA
ATCGTCTACACTAGCCATGGCAAGAATGACTTTACTATTGCTGCCGATCT
TTGGAGCCACATGGTTATTTGGTGTACTGGCGATCAATAACGAGACACTG
TTCTTCAAATATATATTCACCATACTCAACACTCTACAGggtTTGTTTAT
ATTCATGGTTTACATTGTCCTAAGCAAGGAGaCACGACTTGAGATCAAGA
AACGTCTATCTAATCCATATGCTCTCGCATTATTCCACAGATGTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045244XLOC_045244Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072929-proteinTCONS_00072929-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072929-exon-scaffold_86-1491911889:918357..918616TCONS_00072929-exon-scaffold_86-1491911889:918357..918616Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:918357..918616TCONS_00072929-exon-scaffold_86-1510915933:918357..918616Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:918357..918616TCONS_00072929-exon-scaffold_86-1575043694:918357..918616Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:920658..920792TCONS_00072929-exon-scaffold_86-1491911889:920658..920792Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:920658..920792TCONS_00072929-exon-scaffold_86-1510915933:920658..920792Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:920658..920792TCONS_00072929-exon-scaffold_86-1575043694:920658..920792Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:921033..921493TCONS_00072929-exon-scaffold_86-1491911889:921033..921493Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:921033..921493TCONS_00072929-exon-scaffold_86-1510915933:921033..921493Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:921033..921493TCONS_00072929-exon-scaffold_86-1575043694:921033..921493Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:921638..922061TCONS_00072929-exon-scaffold_86-1491911889:921638..922061Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:921638..922061TCONS_00072929-exon-scaffold_86-1510915933:921638..922061Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:921638..922061TCONS_00072929-exon-scaffold_86-1575043694:921638..922061Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:922529..922638TCONS_00072929-exon-scaffold_86-1491911889:922529..922638Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:922529..922638TCONS_00072929-exon-scaffold_86-1510915933:922529..922638Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:922529..922638TCONS_00072929-exon-scaffold_86-1575043694:922529..922638Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:922980..923054TCONS_00072929-exon-scaffold_86-1491911889:922980..923054Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:922980..923054TCONS_00072929-exon-scaffold_86-1510915933:922980..923054Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:922980..923054TCONS_00072929-exon-scaffold_86-1575043694:922980..923054Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:923453..923585TCONS_00072929-exon-scaffold_86-1491911889:923453..923585Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:923453..923585TCONS_00072929-exon-scaffold_86-1510915933:923453..923585Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:923453..923585TCONS_00072929-exon-scaffold_86-1575043694:923453..923585Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:923926..924081TCONS_00072929-exon-scaffold_86-1491911889:923926..924081Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:923926..924081TCONS_00072929-exon-scaffold_86-1510915933:923926..924081Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:923926..924081TCONS_00072929-exon-scaffold_86-1575043694:923926..924081Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:924286..924343TCONS_00072929-exon-scaffold_86-1491911889:924286..924343Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:924286..924343TCONS_00072929-exon-scaffold_86-1510915933:924286..924343Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:924286..924343TCONS_00072929-exon-scaffold_86-1575043694:924286..924343Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:924694..924793TCONS_00072929-exon-scaffold_86-1491911889:924694..924793Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:924694..924793TCONS_00072929-exon-scaffold_86-1510915933:924694..924793Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:924694..924793TCONS_00072929-exon-scaffold_86-1575043694:924694..924793Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:925516..925692TCONS_00072929-exon-scaffold_86-1491911889:925516..925692Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:925516..925692TCONS_00072929-exon-scaffold_86-1510915933:925516..925692Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:925516..925692TCONS_00072929-exon-scaffold_86-1575043694:925516..925692Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:926101..926210TCONS_00072929-exon-scaffold_86-1491911889:926101..926210Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:926101..926210TCONS_00072929-exon-scaffold_86-1510915933:926101..926210Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:926101..926210TCONS_00072929-exon-scaffold_86-1575043694:926101..926210Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:926584..926689TCONS_00072929-exon-scaffold_86-1491911889:926584..926689Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:926584..926689TCONS_00072929-exon-scaffold_86-1510915933:926584..926689Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:926584..926689TCONS_00072929-exon-scaffold_86-1575043694:926584..926689Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:927446..927663TCONS_00072929-exon-scaffold_86-1491911889:927446..927663Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:927446..927663TCONS_00072929-exon-scaffold_86-1510915933:927446..927663Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:927446..927663TCONS_00072929-exon-scaffold_86-1575043694:927446..927663Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:929782..929848TCONS_00072929-exon-scaffold_86-1491911889:929782..929848Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:929782..929848TCONS_00072929-exon-scaffold_86-1510915933:929782..929848Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:929782..929848TCONS_00072929-exon-scaffold_86-1575043694:929782..929848Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:930536..930612TCONS_00072929-exon-scaffold_86-1491911889:930536..930612Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:930536..930612TCONS_00072929-exon-scaffold_86-1510915933:930536..930612Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:930536..930612TCONS_00072929-exon-scaffold_86-1575043694:930536..930612Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:930861..930987TCONS_00072929-exon-scaffold_86-1491911889:930861..930987Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:930861..930987TCONS_00072929-exon-scaffold_86-1510915933:930861..930987Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:930861..930987TCONS_00072929-exon-scaffold_86-1575043694:930861..930987Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:931253..931294TCONS_00072929-exon-scaffold_86-1491911889:931253..931294Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:931253..931294TCONS_00072929-exon-scaffold_86-1510915933:931253..931294Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:931253..931294TCONS_00072929-exon-scaffold_86-1575043694:931253..931294Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:931608..931653TCONS_00072929-exon-scaffold_86-1491911889:931608..931653Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:931608..931653TCONS_00072929-exon-scaffold_86-1510915933:931608..931653Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:931608..931653TCONS_00072929-exon-scaffold_86-1575043694:931608..931653Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1491911889:933653..933673TCONS_00072929-exon-scaffold_86-1491911889:933653..933673Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1510915933:933653..933673TCONS_00072929-exon-scaffold_86-1510915933:933653..933673Clytia hemisphaericaexon
TCONS_00072929-exon-scaffold_86-1575043694:933653..933673TCONS_00072929-exon-scaffold_86-1575043694:933653..933673Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:918357..933673 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0437637	0	0	0	0	0	0	0.145487	0.666902	0.616936	0.79206	0	0	1.44857	2.33697	3.63826e-06	0.248807	1.88302	2.13217	0.0539266	3.27207	0.850728	3.04527e-05	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR017981GPCR_2-like
IPR020846MFS_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
Blast
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BLAST of TCONS_00072929 vs. Swiss-Prot (Human)
Match: AGRD1 (Adhesion G-protein coupled receptor D1 OS=Homo sapiens GN=ADGRD1 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 3.869e-56
Identity = 139/442 (31.45%), Postives = 227/442 (51.36%), Query Frame = 2 
Query: 1646 FPNTTQINNQSYGVEGNS-INLPTNIFKYTNLTQQNYSRIISLAYNPTKQMLNATSRGRK-------------VGGGKIISTSIHPP--IVQALSGNDQIIITLE---TMDEQSNAE---------CVYWNYTTNNHKGGWSNFGCQLDPDSSNETHAVCVCNHLTDFSVLIDVAGNDLDERNKLALEMITKIGCSISIFFL---FVTMAIILLFRNIRKQFRYRIHFHLSLALSLANIAFLLNEVALANHEGCLVVSIVTFYFYMAAFFWMLCEGIFIWRALVSVF-TEKDRFAAYMLIGWGTPCIIVTITTAIKYDNMTSENFCWLPLEDGVLMSFVVPAIVVIFANL-IILSVTLKIAGKHAEKM----DQSSXXXXXXXXXXXXPIFGATWLFGVLAINNETLFFKYIFTILNTLQGLFIFMVYIVLSKETRLEIKKR 2860
             P T   ++  +   G S I +P   F      +  +S ++ L Y+     LN                         +IS  + PP  + Q LSG+  I + L+   T  + S A          C + ++++   +G WSN GC L     N T++VC C HLT+F++L+ V   +L   +++AL  I+ +GCS+S+  L    VT A++     IR Q RY IH +LS A+ +A +  L++         C V++++  YF+++AF WML EG+ ++  ++ VF +E  +   Y  +GWG P +I  I+ +   D+  + N CWL L  G + +FV PA+ VI  N+ I+++VT  I+   A+      D S+    A+   +LLPI G +W+FGVLA+N   + F+Y+F  LN+LQGLFIF+ + +L+ E R   K +
Sbjct:  389 LPKTVNSSHYRFPAHGQSFIQIPHEAFH-----RHAWSTVVGLLYHSMHYYLNNIWPAHTKIAEAMHHQDCLLFATSHLISLEVSPPPTLSQNLSGSPLITVHLKHRLTRKQHSEATNSSNRVFVYCAFLDFSSG--EGVWSNHGCALT--RGNLTYSVCRCTHLTNFAILMQVVPLELARGHQVALSSISYVGCSLSVLCLVATLVTFAVLSSVSTIRNQ-RYHIHANLSFAVLVAQVLLLISFRLEPGTTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYYYGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGILIAVTRVISQISADNYKIHGDPSAFKLTAKAVAVLLPILGTSWVFGVLAVNGCAVVFQYMFATLNSLQGLFIFLFHCLLNSEVRAAFKHK 820
The following BLAST results are available for this feature:
BLAST of TCONS_00072929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRD13.869e-5631.45Adhesion G-protein coupled receptor D1 OS=Homo sap... [more]
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