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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072934 ID=TCONS_00072934|Name=TCONS_00072934|organism=Clytia hemisphaerica|type=transcript|length=2077bp
TCACTTTTCTTCACTGACCTGGAGCAACGAATGCCTTCCATATTCAGTAA
ACCCTTCAAATTCACTAATCAATCATTGTTCTGGCAAAAGAATTTACCAA
CAGCTGATAAAGGGAACAAGTCGTTTCTAACAAACCAACCACAGTTCAAT
AATACAAACAAAACTAAAGCTTTCACGTCGAACACCAAGGCTATTTCGAA
GAAAGAGTCAACAACAAGTGGTTTTCAATATGAGAAATCTGAAATGGTGA
GCTCGATTTCTACTTGCTCAAACCTAACACAAACGAATAGCTCTAGGCTT
GTTCAAGCAACATCAAGAAATGTGAATTCTAAACCTTTGCACTCTACACC
TTCGATCAAGAATTTATCGTTGAATAAATCGGCTGATGAAATGAAAACTA
ACCAACTCCCACCACCAAAAACCATTCAAAACAGTCGTTCGGTAGTAACA
AATGTCACAAACCATAAAAAGACGCTTAAAACCCAACTGTCAACCAAGCC
AtcaagtttgaaagaaatccaTCGAAAGCAGACTAAAGTTTTCCCAAAGA
ACTCACCTTGTTTAGGTGGAAACATTATCGATATTCCAGATTCACCATTT
GATCAGCTTGTACCTGAAGAACTGTTACAAAGTAACATGAGTATGAACAA
TGAAGAGAATGCGTTACTTTACCAGGACCAGAATAATGTAAAGCCATCCA
ACGATTTTAAACGTAATGAGCAGAATTCGAAAAGTACAAAAGACAAAGAA
TCCGACCAAACGAACGATGATTGTTTTATCAATAAATCAGATTTCTCTTT
GATAGATGAATCAATGTTTGAAGATGGTTGTGATGATGAAGGCCAAGTTG
TACCAGATCAGAGCACCGGAAATGTATCAAGTATCAAAACCCTACAAACT
GATCAAGCTAACCTCGAGACCAACTTTACTGAAGGAGTTAAACAGCAATC
TCAACGTGAATCTTCACAGTTCAAATCAATTCAAAGTGATACTGATACTG
ATACTTCAAGAGTTGTCCCTTCGTCAAGTATTTCAAATGCTTTCGCAGAC
GATGATATTTTTCCGAAAGGTGACACTTttcATGTTCAGGTTGACGAGaa
gagaaaaaatatcaacGATGGTAGTAACGATGGTCCTTCTAGTCAGAAAC
TTGTTCCTCAATTTGGTCGctgtaaaaagaagaaaaatgtatTCAATGCA
ACCAAACAGATTTCATCCACACAACCATCGTTAACAAACAGGTCTACGGA
ATCTACCAAAGTTGTTCCTTCCTTTAAAACGAAAACCAATCCGTTTAAAG
CAACGAGCTTTTCAAAATCGACAAAAATCATCCCTGAAAAGCGTAAACTG
CAGACCACGCATAATGTGAGCTCGACAACCAATGCAAAGAAACCGAAAGT
CATTACTAAGACTCCGTCCAGCTCTACCAAGCCATCTATAATCAAAACAC
CAACTAACTGCGTACAGAATCGAAAGGAATTGAACGGTAATATCAGAAAC
TCACCTCTACCACCAACTCCCTTGGTCACATCTACAGACGATTTTTCAAC
CAAGAAGAAGTCTTTCTCGTGTGTGCAGAAAGAACCATTCACGTCATCAC
AAGGGCTTTCATTAGCTAATGAAATCCTCCGCAATATCTCGAGCAGCCAA
TCAACAGTCAAGGGAATGAGCGAATCACAAGGAAGCAATACAATCCAACA
GACACCCGACTCGACGACATCCTTCACAAACAATCAAGCTGCCAAGAAAC
CACGGGCTAAACCAAAGATCAATGAAGATATTAATGTTGAGGAAATGGCC
AGAACTGGAAAACTTTCGAAAGTGAATGCACCAACGTTGAAAAATTGGTT
AAGAAGTAAATCAGTGGTTTTCAAAGCAAGTGAAAAGAAAGATGCTTTGG
TGTTGAAAGCCCTTGAATACCTTGGCATTCCAAATGGAAATCCTGCCGTA
TCTTAAGAAAATGTCAAGCTCGTCGAGGAACTGAAAGATACGAAGGTAAG
AAAGAATTTTGGTCCCCTGTGAAGAACCTCAAAATATCTTTGCTCTTAGT
CTTGCTTATCTCGATTgtgaaaattgc Run BLAST on NCBI protein sequence of TCONS_00072934-protein >TCONS_00072934-protein ID=TCONS_00072934-protein|Name=TCONS_00072934-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
SLFFTDLEQRMPSIFSKPFKFTNQSLFWQKNLPTADKGNKSFLTNQPQFN
NTNKTKAFTSNTKAISKKESTTSGFQYEKSEMVSSISTCSNLTQTNSSRL
VQATSRNVNSKPLHSTPSIKNLSLNKSADEMKTNQLPPPKTIQNSRSVVT
NVTNHKKTLKTQLSTKPSSLKEIHRKQTKVFPKNSPCLGGNIIDIPDSPF
DQLVPEELLQSNMSMNNEENALLYQDQNNVKPSNDFKRNEQNSKSTKDKE
SDQTNDDCFINKSDFSLIDESMFEDGCDDEGQVVPDQSTGNVSSIKTLQT
DQANLETNFTEGVKQQSQRESSQFKSIQSDTDTDTSRVVPSSSISNAFAD
DDIFPKGDTFHVQVDEKRKNINDGSNDGPSSQKLVPQFGRCKKKKNVFNA
TKQISSTQPSLTNRSTESTKVVPSFKTKTNPFKATSFSKSTKIIPEKRKL
QTTHNVSSTTNAKKPKVITKTPSSSTKPSIIKTPTNCVQNRKELNGNIRN
SPLPPTPLVTSTDDFSTKKKSFSCVQKEPFTSSQGLSLANEILRNISSSQ
STVKGMSESQGSNTIQQTPDSTTSFTNNQAAKKPRAKPKINEDINVEEMA
RTGKLSKVNAPTLKNWLRSKSVVFKASEKKDALVLKALEYLGIPNGNPAV
S Run BLAST on NCBI transcript from alignment at scaffold_86:982267..985582+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072934 ID=TCONS_00072934|Name=TCONS_00072934|organism=Clytia hemisphaerica|type=transcript|length=3316bp|location=Sequence derived from alignment at scaffold_86:982267..985582+ (Clytia hemisphaerica)
TCACTTTTCTTCACTGACCTGGAGCAACGAATGCCTTCCATATTCAGTAA
ACCCTTCAAATTCACTAATCAATCATTGTTCTGGCAAAAGAATTTACCAA
CAGCTGATAAAGGGAACAAGTCGTTTCTAACAAACCAACCACAGTTCAAT
AATACAAACAAAACTAAAGCTTTCACGTCGAACACCAAGGCTATTTCGAA
GAAAGAGTCAACAACAAGTGGTTTTCAATATGAGAAATCTGAAATGGTGA
GCTCGATTTCTACTTGCTCAAACCTAACACAAACGAATAGCTCTAGGCTT
GTTCAAGCAACATCAAGAAATGTGAATTCTAAACCTTTGCACTCTACACC
TTCGATCAAGAATTTATCGTTGAATAAATCGGCTGATGAAATGAAAACTA
ACCAACTCCCACCACCAAAAACCATTCAAAACAGTCGTTCGGTAGTAACA
AATGTCACAAACCATAAAAAGACGCTTAAAACCCAACTGTCAACCAAGCC
AtcaagtttgaaagaaatccaTCGAAAGCAGACTAAAGTTTTCCCAAAGA
ACTCACCTTGTTTAGGTGGAAACATTATCGATATTCCAGATTCACCATTT
GATCAGCTTGTACCTGAAGAACTGTTACAAAGTAACATGAGTATGAACAA
TGAAGAGAATGCGTTACTTTACCAGGACCAGAATAATGTAAAGCCATCCA
ACGATTTTAAACGTAATGAGCAGAATTCGAAAAGTACAAAAGACAAAGAA
TCCGACCAAACGAACGATGATTGTTTTATCAATAAATCAGATTTCTCTTT
GATAGATGAATCAATGTTTGAAGATGGTTGTGATGATGAAGGCCAAGTTG
TACCAGATCAGAGCACCGGAAATGTATCAAGTATCAAAACCCTACAAACT
GATCAAGCTAACCTCGAGACCAACTTTACTGAAGGAGTTAAACAGCAATC
TCAACGTGAATCTTCACAGTTCAAATCAATTCAAAGTGATACTGATACTG
ATACTTCAAGAGTTGTCCCTTCGTCAAGTATTTCAAATGCTTTCGCAGAC
GATGATATTTTTCCGAAAGGTGACACTTGTGAGTACTCGTTTCTTTTCGA
TAACAAATTAGCTTTTTTGTAcattttacattgaattttaaTGCTTATAC
GATTTCATTTAAAATAGGCAATTCGACGCGGCGAATACATATCTTGGGTT
TTCAAATTTCCTAGACAAAAAATAATTAGGGGCATGGACCCATTCGCCAA
TGCTGCtttgattcaaaaaaaatttattctttaCTAAACACAGCGGTTGG
ATGCAAAACCTTAATTCAATTTATTTCCATTGAAATCAATAGATCTTTTC
ATTTTGtgtgcaacgactgcctcgttttgaaatctTTGCCAAAATGATCA
ACTCCCTTGAGTCTTCAAACTTCTTACgaactcctctgggaatcaattaT
CATTGAAATAGTTTGAAAACGTGGAAAGCGTTGCTCTTGACGTAATTGAT
AAAGAGGTCCATCCCTCAGGAGGAAAATAACAAACGGGCCTTCGACGCTA
TAAACGTTTATTAGGAATCTAAAAGTAATGAAATTCAAAgaccattttca
atttcagttcATGTTCAGGTTGACGAGaagagaaaaaatatcaacGATGG
TAGTAACGATGGTCCTTCTAGTCAGAAACTTGTTCCTCAATTTGGTCGct
gtaaaaagaagaaaaatgtatTCAATGCAACCAAACAGATTTCATCCACA
CAACCATCGTTAACAAACAGGTCTACGGAATCTACCAAAGTTGTTCCTTC
CTTTAAAACGAAAACCAATCCGTTTAAAGCAACGAGCTTTTCAAAATCGA
CAAAAATCATCCCTGAAAAGCGTAAACTGCAGACCACGCATAATGTGAGC
TCGACAACCAATGCAAAGAAACCGAAAGTCATTACTAAGACTCCGTCCAG
CTCTACCAAGCCATCTATAATCAAAACACCAACTAACTGCGTACAGAATC
GAAAGGAATTGAACGGTAATATCAGAAACTCACCTCTACCACCAACTCCC
TTGGTCACATCTACAGACGATTTTTCAACCAAGAAGAAGTCTTTCTCGTG
TGTGCAGAAAGAACCATTCACGTCATCACAAGGGCTTTCATTAGCTAATG
AAATCCTCCGCAATATCTCGAGCAGCCAATCAACAGTCAAGGGAATGAGC
GAATCACAAGGAAGCAATACAATCCAACAGGTACAAAAACATAGTTCTTT
AATTCGACATCTACCCCAGCGCACACTGAACTCCGTCAAAGTGATGATTT
TCTTGAGGCTTAAGGGGTGGTATATTTTTCAGGAATTGAGGGTCAAGCTT
GTAAAGTGAGGGTTAGTTTAAAGCCCTATTAATTTCATTGCTTAGCTGGT
AACTGTGCTGTTGTTTCGACTTGAAATGGTTTTCAAAAGACAATGTCTCG
TAAATTTCTATTGCTCTTTGGTGGGCAGACAGTATTAatcattctatttt
tattttacgataGACACCCGACTCGACGACATCCTTCACAAACAATCAAG
CTGCCAAGAAACCACGGGCTAAACCAAAGATCAATGAAGATATTAATGTT
GAGGAAATGGCCAGAACTGGAAAAGTTTGTATTTTGATACTCATTCATCA
TTTATTACTTCTTTCTATCTCGAAAactcccgtaataccgtacggACAAA
AGTTAGTTTCTTCTCAAATTTCGACCCCTTACAGTACACTTGCTGGGGAA
GCCAGAAAAACGAAACCCTTTACTTTGACAGTGCCCCCCTCCATGTGTAG
TAACACTAATATATGTCAAGTTACTTTCAACCCTGTAACAAGTGATAACC
TATATTTAACCGATTTTGTTCAAACTTTCTGTCCTTAAAGTAGCCATCCT
TTGCGGGCCTTTTTTCctccaaaaataaatttttatatcgTTTTTTCATA
TTCCAACCAATTGGTagttttttgtccatttttaaGCTTTCAAGGCCTTT
GATCAGTGAAATAAATACCCCTCATGGGGTatcttcttaatttttcttcA
GCTTTCGAAAGTGAATGCACCAACGTTGAAAAATTGGTTAAGAAGTAAAT
CAGTGGTTTTCAAAGCAAGTGAAAAGAAAGATGCTTTGGTGTTGAAAGCC
CTTGAATACCTTGGCATTCCAAATGGAAATCCTGCCGTATCTTAAGAAAA
TGTCAAGCTCGTCGAGGAACTGAAAGATACGAAGGTAAGAAAGAATTTTG
GTCCCCTGTGAAGAACCTCAAAATATCTTTGCTCTTAGTCTTGCTTATCT
CGATTgtgaaaattgc Coding sequence (CDS) from alignment at scaffold_86:982267..985582+ >TCONS_00072934 ID=TCONS_00072934|Name=TCONS_00072934|organism=Clytia hemisphaerica|type=CDS|length=1956bp|location=Sequence derived from alignment at scaffold_86:982267..985582+ (Clytia hemisphaerica)
TCACTTTTCTTCACTGACCTGGAGCAACGAATGCCTTCCATATTCAGTAA
ACCCTTCAAATTCACTAATCAATCATTGTTCTGGCAAAAGAATTTACCAA
CAGCTGATAAAGGGAACAAGTCGTTTCTAACAAACCAACCACAGTTCAAT
AATACAAACAAAACTAAAGCTTTCACGTCGAACACCAAGGCTATTTCGAA
GAAAGAGTCAACAACAAGTGGTTTTCAATATGAGAAATCTGAAATGGTGA
GCTCGATTTCTACTTGCTCAAACCTAACACAAACGAATAGCTCTAGGCTT
GTTCAAGCAACATCAAGAAATGTGAATTCTAAACCTTTGCACTCTACACC
TTCGATCAAGAATTTATCGTTGAATAAATCGGCTGATGAAATGAAAACTA
ACCAACTCCCACCACCAAAAACCATTCAAAACAGTCGTTCGGTAGTAACA
AATGTCACAAACCATAAAAAGACGCTTAAAACCCAACTGTCAACCAAGCC
AtcaagtttgaaagaaatccaTCGAAAGCAGACTAAAGTTTTCCCAAAGA
ACTCACCTTGTTTAGGTGGAAACATTATCGATATTCCAGATTCACCATTT
GATCAGCTTGTACCTGAAGAACTGTTACAAAGTAACATGAGTATGAACAA
TGAAGAGAATGCGTTACTTTACCAGGACCAGAATAATGTAAAGCCATCCA
ACGATTTTAAACGTAATGAGCAGAATTCGAAAAGTACAAAAGACAAAGAA
TCCGACCAAACGAACGATGATTGTTTTATCAATAAATCAGATTTCTCTTT
GATAGATGAATCAATGTTTGAAGATGGTTGTGATGATGAAGGCCAAGTTG
TACCAGATCAGAGCACCGGAAATGTATCAAGTATCAAAACCCTACAAACT
GATCAAGCTAACCTCGAGACCAACTTTACTGAAGGAGTTAAACAGCAATC
TCAACGTGAATCTTCACAGTTCAAATCAATTCAAAGTGATACTGATACTG
ATACTTCAAGAGTTGTCCCTTCGTCAAGTATTTCAAATGCTTTCGCAGAC
GATGATATTTTTCCGAAAGGTGACACTTttcATGTTCAGGTTGACGAGaa
gagaaaaaatatcaacGATGGTAGTAACGATGGTCCTTCTAGTCAGAAAC
TTGTTCCTCAATTTGGTCGctgtaaaaagaagaaaaatgtatTCAATGCA
ACCAAACAGATTTCATCCACACAACCATCGTTAACAAACAGGTCTACGGA
ATCTACCAAAGTTGTTCCTTCCTTTAAAACGAAAACCAATCCGTTTAAAG
CAACGAGCTTTTCAAAATCGACAAAAATCATCCCTGAAAAGCGTAAACTG
CAGACCACGCATAATGTGAGCTCGACAACCAATGCAAAGAAACCGAAAGT
CATTACTAAGACTCCGTCCAGCTCTACCAAGCCATCTATAATCAAAACAC
CAACTAACTGCGTACAGAATCGAAAGGAATTGAACGGTAATATCAGAAAC
TCACCTCTACCACCAACTCCCTTGGTCACATCTACAGACGATTTTTCAAC
CAAGAAGAAGTCTTTCTCGTGTGTGCAGAAAGAACCATTCACGTCATCAC
AAGGGCTTTCATTAGCTAATGAAATCCTCCGCAATATCTCGAGCAGCCAA
TCAACAGTCAAGGGAATGAGCGAATCACAAGGAAGCAATACAATCCAACA
GACACCCGACTCGACGACATCCTTCACAAACAATCAAGCTGCCAAGAAAC
CACGGGCTAAACCAAAGATCAATGAAGATATTAATGTTGAGGAAATGGCC
AGAACTGGAAAACTTTCGAAAGTGAATGCACCAACGTTGAAAAATTGGTT
AAGAAGTAAATCAGTGGTTTTCAAAGCAAGTGAAAAGAAAGATGCTTTGG
TGTTGAAAGCCCTTGAATACCTTGGCATTCCAAATGGAAATCCTGCCGTA
TCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00072934-exon-scaffold_86-1491911889:982267..983344 | TCONS_00072934-exon-scaffold_86-1491911889:982267..983344 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1510915933:982267..983344 | TCONS_00072934-exon-scaffold_86-1510915933:982267..983344 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1575043694:982267..983344 | TCONS_00072934-exon-scaffold_86-1575043694:982267..983344 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1491911889:983874..984496 | TCONS_00072934-exon-scaffold_86-1491911889:983874..984496 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1510915933:983874..984496 | TCONS_00072934-exon-scaffold_86-1510915933:983874..984496 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1575043694:983874..984496 | TCONS_00072934-exon-scaffold_86-1575043694:983874..984496 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1491911889:984780..984890 | TCONS_00072934-exon-scaffold_86-1491911889:984780..984890 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1510915933:984780..984890 | TCONS_00072934-exon-scaffold_86-1510915933:984780..984890 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1575043694:984780..984890 | TCONS_00072934-exon-scaffold_86-1575043694:984780..984890 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1491911889:985318..985582 | TCONS_00072934-exon-scaffold_86-1491911889:985318..985582 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1510915933:985318..985582 | TCONS_00072934-exon-scaffold_86-1510915933:985318..985582 | Clytia hemisphaerica | exon |
| TCONS_00072934-exon-scaffold_86-1575043694:985318..985582 | TCONS_00072934-exon-scaffold_86-1575043694:985318..985582 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:982267..985582 + |
Blast
The following BLAST results are available for this feature:
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