TCONS_00073466 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073466
Unique NameTCONS_00073466
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2824

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073466 ID=TCONS_00073466|Name=TCONS_00073466|organism=Clytia hemisphaerica|type=transcript|length=2824bp
AGAATACTTTGAAAAGGTGAATACGAAGAATATTTGAACCTCAAATCGAT
CAAtaCTGAGGTCATGGTTCCGCCTTGCTTCTTATTGCTAATCTACTTGA
TTAATCCAGttTTTGGTTCATGGAGCTCTTGGAGTTCGATCAGAGGATGT
TACAACAAAGATATGTTCGGTCCAAAGGTCAACAAACACAAACGAACATG
TTCCGGTAGTTGTCCCACTGGTACCAATTCCATCCAATTCGGATATGCAT
GTCATGAAGGATATACTGCCCCGTATATTATAAAAGATGATGGCACACGT
CCCAACTGTGGCGGTCCATTTATTTGCAAAGCCACTTATAATTTTGATGT
GCAGTTCCATTTGAATTTTCATCTCATGAACTTTCCTACCAGTAATCTTG
ATATCATTGTTGCCTCCAACAAAGACGTCTCAGGGGATGCTGaaatcaaa
attgaaagtGTCAATCATGTTGACGACTCCAACTTAAATCTGGCTTACAC
GAAGAATCCGTTTGATTTCACGGCAACACATTTTGTTGCGGATCGCTATA
GGGCCCAGACAACAACATTTGGTTTTAATTCAGTTGTTGTTGATGGCAAC
AGATTAAAGATTAAAGCAACTGGaaagaTTACATCAAACTCTCAACCCTC
TTCTCAAGCAGTACTTAGTGCTGgtttccattttcaaaattccaatATGG
ATGCAGATGAGGCTAACGAGACCATAATTATCCTTCAAAACAAGCGTGAA
AGAGCTGGTAGCAGCCTCAAAGGAAGTAGTGATATCATAAATAAGGGAGC
CAGCGAATTGAGTGGTGCTCCAGCTATGATACTGAGGCCTGGCTTTGTTT
ATCCATCATCAACGGAAATAGGGGCAACTGGTGAAAATCAAATCTATGAT
CTTACACATCGGGTTTACATCCCCAAATTACAGTTCAATATCCATACTAA
CATTTACTGTGATATGGCGTCTGGTTACAGTCCAGAAAAATTAACCATGT
GGACGAACACTGAGAAAAGTCAACACGTGCTTCAGGTGTCTACATTATTC
GCACAAGGAGAAGGTATcttaacaaaacataaaatggTAGATATTGATAA
TGAATATTTCACCAACACCTACATCGTTACTAAACCAGCCAGAAGACTTC
ATTATGATCGGGTTTGGTGTGATCGACCTTTAAACGATTGTTCAGCTTCC
AACACTTTCACCACAGTGACTAATACATGGTCTAAAGAATTCCCCTTATA
CAAAGAAGAATCACAGACAGAGCCTTACGTACCTTATCGGATTAAACAAC
TCCAGAGCGGACTGTGTTGGGAATTCAAAGACAATGTCATCATCTTATCC
TCAAAATGTCGAGATCGATTTCACTTCAATTACAAATTGGAAATCTTCCA
TTCGGAGACTGGTAAACAGTTATATCTCCATGGCAACGGTTGGAAAACGA
CACCAAGTTCGGCTGGATTCTTCAATAAAGAGCATGGATCTTATACTGCT
ATTATTGCTGGATGGCGCTTTGGAAAATGNGTTGGAAAACGACACCAAGT
TCGGCTGGATTCTTCAATAAAGAGCATGGATCTTATACTGCTATTATTGC
TGGATGGCGCTTTGGAAAATGCTTTATGGAAGGAAATTATGGTCACACCG
CTACTGGCATCAAATACCAATCAAGCCTTAAATGCACTGCCAACAACACT
CAAATTCTCTACCGACCTGATCTTTCGGAGCATTATAATAAGATTAACAT
GAAGAATTTGGTTCAAGTTACTCACAATTCTCAACCAATCATGGTCGTTT
GTGAACCAACTAAATTCCTTTCGAAAAGATCAAATTGCCGTTACTCTTCA
GACAAAGGCGCCAAATGGACAGGGACTCCGACAGTTCTTTCGCAGATTAT
GTTCTACTTGCCAAGCAGCTCACTTTTTTATGGACACTGTCTTCAAGCGA
AACATTATTGTACTTTCGATTTGGACAAGATGCGAACGACGTACATCGAA
GAAACAGAATATACCGACAAATTGAGTGATCTTTCAATGGTGTCGGCGAC
AGGTTTAGACGACATGTCGTTGACTTATGACACTGAAGAATCCAATGAAG
ACCCTTCTATTGGATTATCAGCAAAGGGGCTTTTCACATCGAACGGTGGC
ACGTGGACCAAAATGTATCATTGGATGAATTGAATGGATGAGAAACCGCC
CGTTTTCCGCCCTTCCGAATTCCCATGCTCAGGGATAGTTCGGACATATA
GGGTTACGATTCGACAGTATACTTCGTGATTCGTGTATTAATGAAAGTCG
ATTGGAATACGGAGCCACTCTTAGATGGcctgggtaatcaggactgatta
tGTTCTATTAATGATGCCCATCCGGTGGTTAAGGGTAAATTCTTCAAAAC
GTTGTACCAATAAAGAGTGATTAAAATGATTCACAGGTGACGCCCATTGG
TTACGCCCACTAATGTTActtatattttttatacaaatcaTGCGTCATCA
GATCATCAGATGATACGCATTGGCACTCGTATTAGTATATCTAATATGTA
GTttcatttgctttttttttataaattcaatttttgactattttaatCAT
TCAAATTATGACTCGCATAATTTCAACTAAACGCTAGCGCTATTTATACA
TTTGTAGGATAGGAGCGAACAGATAACAGCACAGCACAACTATTTATATA
TTGAGGAACAATTTAATTTAAAGGAGAAAAGTGATTACCGCTTTTTAAGT
GCCTAACTTCACCTTCCACGGTCGTTGGAAATGACTTTCCAAATGCATTC
ACAAATGATAAACACAAATCCTGT
Run BLAST on NCBI

protein sequence of TCONS_00073466-protein

>TCONS_00073466-protein ID=TCONS_00073466-protein|Name=TCONS_00073466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=562bp
MVPPCFLLLIYLINPVFGSWSSWSSIRGCYNKDMFGPKVNKHKRTCSGSC
PTGTNSIQFGYACHEGYTAPYIIKDDGTRPNCGGPFICKATYNFDVQFHL
NFHLMNFPTSNLDIIVASNKDVSGDAEIKIESVNHVDDSNLNLAYTKNPF
DFTATHFVADRYRAQTTTFGFNSVVVDGNRLKIKATGKITSNSQPSSQAV
LSAGFHFQNSNMDADEANETIIILQNKRERAGSSLKGSSDIINKGASELS
GAPAMILRPGFVYPSSTEIGATGENQIYDLTHRVYIPKLQFNIHTNIYCD
MASGYSPEKLTMWTNTEKSQHVLQVSTLFAQGEGILTKHKMVDIDNEYFT
NTYIVTKPARRLHYDRVWCDRPLNDCSASNTFTTVTNTWSKEFPLYKEES
QTEPYVPYRIKQLQSGLCWEFKDNVIILSSKCRDRFHFNYKLEIFHSETG
KQLYLHGNGWKTTPSSAGFFNKEHGSYTAIIAGWRFGKXVGKRHQVRLDS
SIKSMDLILLLLLDGALENALWKEIMVTPLLASNTNQALNALPTTLKFST
DLIFRSIIIRLT
Run BLAST on NCBI

transcript from alignment at scaffold_92:247552..259046-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073466 ID=TCONS_00073466|Name=TCONS_00073466|organism=Clytia hemisphaerica|type=transcript|length=11495bp|location=Sequence derived from alignment at scaffold_92:247552..259046- (Clytia hemisphaerica)
AGAATACTTTGAAAAGGTGAATACGAAGAATATTTGAACCTCAAATCGAT
CAAGTAAAATTTGATATATTTTATAATCTTACTATTGTACTTCATATTTG
TTTTTGACATAATCATTTTTCTATTTTACTCTACGTTCATGTAGACAAGG
CCTTACCATTCATGGTTTTGATGAATATTGAATATGAATTATGTCCTCTC
CAGGGAATTTCTTTCTTATTTTCCTTCAATTATTCAGCATATTTGATTTG
TAAAAAGTTTTCCTCTGTTTGTCAATGATGATGGTCAGATTTTAGTCTTT
TTTTCATTTTTTGTAGTACTGAGGTCATGGTTCCGCCTTGCTTCTTATTG
CTAATCTACTTGATTAATCCAGGTATGGCTTTTGATTTAGCTTTAATGAA
AAGGAGGAAATTTTATATTCTTAAATTTTAAGAGTAGTAAGTTGTCGAGT
CTGACCGAGTGGAAAGTTGCTGAGTAAGCAGATAATATATGAGCTACGTT
AAGCTCCCTTTTTTTTAACTTTTAGTTTTTGGTTCATGGAGCTCTTGGAG
TTCGATCAGAGGATGTTACAACAAAGATATGTTCGGTCCAAAGGTCAACA
AACACAAACGAACATGTTCCGGTAGTTGTCCCACTGGTACCAATTCCATC
CAATTCGGATATGCATGTCATGAAGGATGTATGTACTTGTTTGTTTGTTG
ATGATAGTTATGCAAAAACAGAGAACAAAACACAGTCTAGACAGAAAAAA
TGGCCAAAATACAGAAACTGAAAATGCCAGAAAATCAAGAAAGTCAAAAC
TGCAGCTGATGCTGTGACAAAGAGTCCTCTCCGACGGCGCTGGGGCGGCT
AGTCCCGTATATTATTCAATTAATGGTCTTTTATTTTTGGACTTACCTGA
AGGTCCTATAAATTAACCTGTGTTCGTTCGTTCGTCCGTCCGTCCGTTCG
TCTGTTACCAACTTTTCTCGGGATTGAATCATAGGAATTTTTTTATTTTT
GGTACAAAGGTGCAAAGTGGTGGTGGCCAAAATGTGAGGAAGCCCAGCGG
AGCCCGATATTCGAAAAAAATGCCAAAAAAAAGGGTTTTCATTAGATTTT
CCTGATTTTTTGTACAGAGATGTAGGAATAACATTGTTCAAAATATGAAT
TAGTTCATTTTTCGAAGAAAAAAAATTTGGGGGCCAATTTGGGCCCAAAA
ATGCCTAAATATAGGGCTTTTTTGGACTTTGTGAAAAAAACTCTTCCTTA
GTTTTTCCTGATTTTTTGTACGAAGACGTGGAATTACAGTGTGCTAAATA
TAAAAAAGTTGATTTTTCAAGAAAAAAATTTTTTGGGCNGTGTGCTAAAT
ATAAAAAAGTTGATTTTTCAAGAAAAAAATTTTTTGGGCCAAATTAGGCC
CAAAAATAGGGTTTTTGTAGAAAATCTGTTAATGAGATTCTCCTGAATTT
TTGTATAGAGAGGTAGAATAACAATGTGCTAAATATAATATAATGCATAT
CCACTCCACCTTTTTTTATATGGTTAGGTGCGGACTGTTTTATTTTGTTT
CAAGAACACTTTTGCCACATGTTCAGATCATGTGAACTACTGGATTGTTC
ACGTGTTCATTTTTCATTCAGGTAGGTCCATAAATGTATCACTTGTTTGT
CTTTCAGATACTGCCCCGTATATTATAAAAGATGATGGCACACGTCCCAA
CTGTGGCGGTCCATTTATTTGCAAAGCCACTTATAATTTTGATGTGCAGT
TCCATTTGAATTTTCATCTCATGAACTTTCCTACCAGTAATCTTGATATC
ATTGTTGCCTCCAACAAAGACGTCTCAGGGGATGCTGGTATGTACTGATA
AGCCATTTTATGGACTACTTCGTTAATGATAACTATCTTCGTTAAAGATA
TTGTAAAGTGTTCAGTTACTCTTGAGACAGGCTTTAATTGAGTTAACGTG
TAATTTAGAAATCTCCCCAGTGGGTTGAGTCATGGTGTAATTGTAAAAAT
TTTCTTGCGTCATATCAACTTTTAGTGTCATCGTGACGTGGTAAAAATAT
TAAACTATTTCATAGAATTAGTGCATCTGTTACATGGCTTTTCTCTATTC
AATTTAAAGGAATATGCACTGATTTCCATTTGAGAAGAATGTTGAAAAAA
ATTATTTTTTGTCATGAAGTTTTTCTGTTGTTGTACAGAAATCAAAATTG
AAAGTGTCAATCATGTTGACGACTCCAACTTAAATCTGGCTTACACGAAG
AATCCGTTTGATTTCACGGCAACACATTTTGTTGCGGATCGCTATAGGGC
CCAGACAACAACATTTGGTTTTAATTCAGTTGTTGTTGATGGCAACAGAT
TAAAGATTAAAGCAACTGGAAAGGTATTAGCTTTTCTATTAACACAAGAT
TTGTAGTTTTACAGTTCATACTCGTTCGGTGATTTTATGATAACGTGCTC
TTAATATGTTTTAAGAAAGTTTGAAAATGACCTTAAAATCAGTGAAACCA
GTTTATTGATTTTTAATTAAAATACTTTCACTGTCGAACGTAATAACGGA
AAGGAAAAACATCATTGGGACTTTAACCCAGGGTTAAGGATCATAGGTAT
AAAATTTCAGTAATTTCAGCCCTAATTTAATGCCGGCCCTTATTACGCCA
CAGCCTGATTTTAGGCTTACGCCAATTAGCAGAATTAGGGCCGTAAATAA
CGCCAAAATTTGTTAGAATGGCTATTATTTTATGCTTCAATTTACATTGA
AATATCATTTTTCAGTAGTAAACTGTTAATATTCTATTGAAAATCACTGA
TTTTTGCGAAGTTTTAGATATGGAGTAAAACAATGGATAATTTTTATCTT
CTAATCATACCCAAAATCCTTTAGATTGAGAAAAATGGTAAAAAATTAAC
GCCACTTTTAAGTAAAATTTGCAAAATATTGGCCCTTTCTACACCGGCCC
TTTTAACACCGGCCCTTATTACGCCAAGAGCCTAAAAATAACGCCAACAA
GGGCCGGCGTAAAAAGGGCAGATAAGGTAATAGGAATCTTGTGTATTGAC
CACTTTCCCTATTCGCCGAAATTTCTTGTCTATTTATGTGAGTGGAATGT
TTAATACTTCTTTTTTATTTTTGCAGATTACATCAAACTCTCAACCCTCT
TCTCAAGCAGTACTTAGTGCTGGTTTCCATTTTCAAAATTCCAATATGGA
TGCAGATGAGGCTAACGAGACCATAATTATCCTTCAAAACAAGCGTGAAA
GAGCTGGTAGCAGCCTCAAAGGAAGTAGTGATATCATAAATAAGGGAGCC
AGCGAATTGAGTGGTGCTCCAGCTATGATACTGAGGCCTGGGTTAGTTAA
CGATTTATTCATCTTATTATTCTTTTTTTACTAGGCGAGACCAATTTGTT
GATTAGTTGTTTTACGGGCCCGACCGAATAATAAAAATTGATTTTGGTAG
TTGCAAATTTTCAAAATTTTGGTAGTTTTTTGTGTTATTTTATTGTCTAT
TTCGTATTTTTGTCAAGATGTAGTAGTTTTTGCTGCCTTTTTAGGGAATT
TTCAATTCGATTGTAATTCTACTTATTTATTTCGCCGATCGACCCTCTTT
TTTGGGTAGCTTGGCCCGTAAAACAACAAATTCATTGGTCTTGCCTAATT
GGAAAAAAATAGATTTCACTTTAGAACATATATACTATAAACAAAACGTG
ATATCGCCAGGGATACTAGACTATAAAAAATAATATTCTAATCTCATAGT
CTTGAGTTGCTAGATATCAGTAAAGAAATTTAGCGGAATGACTTAGTATA
TTTTCCTTTTGTAGCTTTGTTTATCCATCATCAACGGAAATAGGGGCAAC
TGGTGAAAATCAAATCTATGATCTTACACATCGGGTTTACATCCCCAAAT
TACAGTTCAATATCCATACTAACATTTACTGTGATATGGCGTCTGGTTAC
AGTCCAGAAAAATTAACCATGTGGACGAACACTGAGAAAAGTCAACACGT
GCTTCAGGTGAGGTGGATCTTTATTACGTAAAATCTTCAGGGGCTGAGAC
ATTTCTCAGCATGGCACACAGTTTTTCGGCGTCACATGTTGAACAGCTTA
CTTGACATATTAATTAACAAAATATTCCAAAGTTTATGTAGAATGGAAAT
TTTCATGTTATGAAATTTGATATTTTGACGGAAGTCCATTTCGAGCCCAA
ATGACCCAAATAACAGATAATAACGATCGTCTTCAGGTTCCCTTTTACAA
GTCGAATTTGAAAGTCTGAACGCCCCAATTTTGCCAAAAAATTTCTTGGT
GAAGCCAATTTAATTAGTTTTACGGACCAAGCTGCCCAAAAAAAGAGGGT
CGGTCGGTCACTCGGCGAAGAAATAACAATAAAAGTTGAATTTCACCTAA
AAAATCTCCTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAGGTACTAAGTTTTTAGG
ATCAATTTTTCCACGGTAAATTTCCTTTCCTAATTTTAATTTTTTGGGCT
GAGGTGTCTTCATTGGAGCTCCCTAGCTAATTTTATGCAATTATTTATTA
GGTGTCTACATTATTCGCACAAGGAGAAGGTATCTTAACAAAACATAAAA
TGGTAGATATTGATAATGAATATTTCACCAACACCTACATCGTTACTAAA
CCAGCCAGAAGACTTCATTATGATCGGGTTTGGTGTGATCGACCTTTAAA
CGATTGTTCAGCTTCCAACACTTTCACCACAGTGACTAATACATGGTCTA
AAGAATTCCCCTTATACAAAGAAGAATCACAGACAGAGCCTTACGGTAAT
TAAGAATGAAGTTAACACCCCTGTATCATAGGCTCACCGGAAGATTTTTT
CCTCAGTAGTGGGGGATGAAAATTCTATCGAAATCTAAATGGGGATAGCA
ATTCTATTGTTCACAGCTCGAAAATTCCAGTGGTAAAAGTTTTGGAGTGC
AATTGTTTTTCATTGAATTTCCAGTGGTAAAAGTTTTGGAGTGCAATTGT
TTTCCATTGTTTTCAATTGAGGATGAAAGCTAAGTCAATTTTTCAATCGG
GGATGAAATTTTGGGCAAGTTTTCCAATAGAAATGGGGTCCTATATGTAT
ACATTCTGACGTGGTCCTTTGAAGGGAGTCCTAGGATCTTTCCCTAGGTA
CCCCCACTGGATCTATTATTCATGATGAAAAAGCGTGCAAACAAAATTGT
TGTTTTTCTATAGTACCTTATCGGATTAAACAACTCCAGAGCGGACTGTG
TTGGGAATTCAAAGACAATGTCATCATCTTATCCTCAAAATGTCGAGATC
GATTTCACTTCAATTACAAATTGGAAATCTTCCATTCGGAGACTGGTAAA
CAGTTATATCTCCATGGCAACGGTTGGAAAACGACACCAAGTTCGGCTGG
ATTCTTCAATAAAGAGCATGGATCTTATACTGCTATTATTGCTGGATGGC
GCTTTGGAAAATGNGTTGGAAAACGACACCAAGTTCGGCTGGATTCTTCA
ATAAAGAGCATGGATCTTATACTGCTATTATTGCTGGATGGCGCTTTGGA
AAATGCTTTATGGAAGGAAATTATGGTCACACCGCTACTGGCATCAAATA
CCAATCAAGCCTTAAATGCACTGCCAACAACACTCAAATTCTCTACCGAC
CTGGTATGTACAGGATGTCTGAAAAAAAAAGTATTAAGCAGAAACAATAA
AAGCAATTTTTTTATGTAAAGTCTCTTTTAACAGAGGAGTGTAAAGAGAT
AGAAAAACAACTTCTTGAAAACAATTGGAATATGGCTCGTCAAATAGTTC
TTTTTCCTTAAGGGAGTTTGTTTCGGTTAATGGATTTCTTTTGTTGTTGA
TCAAAACATCTGCTAGACTAGTAAACTAGTCGTTGAAAACAGACCCATAT
ACAAAAAATTCAAGCTCCAAATAAAAAGAATCGAAGAGGTGAGGTTGCGT
GTCTTTTCTGAATTTCAACGACTAGAAGCTTCTTCCCTCAAAAAACGTTG
TTTAATTTTACAACCTTTTTTAGGTTTTTGAGAATCCATCCAACTTTTTT
GACTAAATGATATTTCATAGTAACATTAAACATGGGAACATATAAATAAA
TGAGCATTTCCAAAAATGCAATAAACAGAAAGAAAAATAAATGCAAACCC
GCACGGGTCAGACATACAAAAATCTGTATGTCTCTCCTTACGATTTTAGG
TGAAGAAAAAAAGGCGTTGGAAGAAGCTTCTAGTCGGTTATTTTCCTTTT
CTCTCACGCGCGCTGAATATTTAATTAGTGTTTACATTATTCGATTGACA
GTTTTATTATAAGGTTATAAGTGATAACCGACTAGTTTACTAGTCTAAAC
ATCTGCATAATTAACGGAAGTCTTTTGTTTTGAGTCTAATTATGCGTAAA
CTTTAAGGGCTTATACAGGGTGTCCCTAATTAAAGTATCGAGTCGAAACA
CAACTATGAGTAGAAAGTTTTATGTGCGTGTTCACAAAATTGTATCTTAA
GCTCTCCCTCTTTTTCTTTGTCATTACGATTAATTTATACGTTGTAACTA
CCTTTTGTAATAAGCCTGTGTGATGGAAAACGTTCTTATATTTTAGCGAT
AACACACACAAACTTTTCTACTCAATCGCATGTTCAAACTCGATACTTTA
ATTAGGGACACCCTGTATTTTGGGAACACTCACACAGACCATGAACATAT
AAACAACTGGACATCCATCTCCTTTGTATTTTTGTAGATTGTAGAAATCA
CTGCTAGCTTCGTTACCGCCTCTTTAAAAACATAAAATGAAACAATAAAT
TTTGATGATATACCCTTAGAGAATACCTTGCTAACAACGTCAAAACTTCG
ACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTTTATCTAGATCATA
ACAAAGATATTAGAGGCCAAATCATCGTAAGCTTGTCAAAACTCAACTCA
GACTAATATTTCAAACGACCAAAGTTTCAAACGACTAAAGATCATCTACT
AAAAGTGGTTGATGCAGCTGGTCGCTATACGTTATCTTTCAAGATTTAAA
CTGTGGGGCTCATGATGGAGGTTACTTCCAATTTAGAAGTATTTGGTTGA
TGATTGCGACATGAAACTTTCAGTACCAAAAAATAAACAATATATCATCC
TCAATTTTCCCATTTGCAAACACTTACAGTGTAGAAAGTATTAGGACTTA
TGTAAAAGTACTCTAGTAATATATTTTCCTATATTTTCCTCATTTTTTAG
ATCTTTCGGAGCATTATAATAAGATTAACATGAAGAATTTGGTTCAAGTT
ACTCACAATTCTCAACCAATCATGGTCGTTTGTGAACCAACTAAATTCCT
GTAAGCTCAGCCAAGGGTTAATATAAAATCACTTAACTTTGCAAAGCGCA
GTTGAGACCACACCTGTAGCAAAAATTGCGTAAACTTTGGTTTTTTCTAT
ATTTTCGGGAATTTAACCTTTTCATAAACTACGTCACGAGCAACGTTTAC
ATTGTTTTCAAAATATTACTATGGTAATTGTTTCTCAAATGAGTTTAAAT
GAAATTTGCTCGGACACTTTGGTGAGATTTTCGGACAAATATGACAGTCT
CAGGCAAAAATCATAGGGTCAAAAATTAATGAAAATTTTAGCTTAAGAAA
AGAGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAATTAAGATTAG
AGATATATAGCGAGTATAGGTGATTTCTGAGCCTAACTCGAGATCTTGAG
CTGCAAAAAGTGGACAAAATACCTTAGGGAAAGACATTTTCGCAGATTTT
GATTTCGCGAATCAGAATATTACACTGTTTTAAGGGTCAATATCTTGAGT
TAGGTACAGAAATCACCTCAAAAAACCTCCAAAAAAAACGAACAAATTCC
CCCCTACTACTCACGGGATTCCTCAAAATTGCTCAAAAAATGATTTATGA
AAAAGCCTTTTGAGAGACCCTATAAGTTTAGAAGATAAGGCATCGCGTGC
TGAGGGGATGAGATCAGCCGCTGGTTTCAGAAAAATTCAGACAAAGTTGA
AGTATCAAAAAATCTGACAGAGACATATTTTGTCTGGCAGGGTATCGACT
AGTATTATTTTATTGATTTCTTTCTTTAGTTCGAAAAGATCAAATTGCCG
TTACTCTTCAGACAAAGGCGCCAAATGGACAGGTATACCTGATATTACTT
GAAACATTTCCCGATTCTGACATTATTTGAGAATTTAAGACGGTTTTTGG
GAAGTGACATAAATTATTTTCCCACCATCAGCATTGTTAAAATATGCTAT
GAGGAGTAAAAGTATGTGACCGCAGTCGGAGGCGACCCGAGGGCTCCTCT
TTCGATAGCTATCTACCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCT
GGATTGCTTAACTTACCCTTGATCCTTCTCTTAATTCCTGAGCACCAAGC
AGAGAGGCATCAAGTACCATTATGACAATCTTTGGTATGACCCGGCTGGG
GGTTGAACCCACAACCCTGTGAATCGTAGCCGAATGCTCTACCACTGCAC
TACGGTCGTTGATCTCCAATGAGGAGTTGTATTCTAACAATCTGACTATT
CTTTTTCAATCTCTATTTCTAGGGACTCCGACAGTTCTTTCGCAGATTAT
GTTCTACTTGCCAAGCAGCTCACTTTTTTATGGACACTGTCTTCAAGCGA
AACATTATTGTACTTTCGATTTGGACAAGATGCGAACGACGTACATCGAA
GAAACAGAATATACCGACAAATTGAGTGATCTTTCAATGGTGTCGGCGAC
AGGTTTAGACGACATGTCGTTGACTTATGACACTGAAGAATCCAATGAAG
ACCCTTCTATTGGATGTAAGTTCAAAATATCTTTCATCTTCAAATTTGCA
AGAAGACCGCGTCCAAGGTTACTAGTAGTCTAGTACCCGGGGCCACTTGG
ACAACTTTTTAATTTCACTGAAAGATGTTGGTACAATCGCTATCAGAATC
ATCGAGCGAAGCGGCTGGGTACGAGTTTGGTTTACAATCCTTTTAGCGCC
AATGTCGGTCATATCCGACTTACGTATTCTCAGTCTATAGATCTTATCGG
AGTTTTTGATTTTTCTAAAACAGCGATGCATTGTGGGATTATTTCGGGGA
TATTTCATTAGAAATTCCTCGACGGAATTCTCATGTAATATCCCCGAAAC
AATCCCACAATTCATCGCTTTTTTAGAAAAATTAATCACTTCTAAAAAGG
TCTATTTGCATCTGACGATCTGACAACAGATACGTACTTTTTTTTTGGCG
AGTAATTTTTAAAAAGTACATTATTGCCGTACATTATCAATTATTTGGAC
CTGGAAATATTACCATATTAAGATTTCTAACTAAAGATCACGAACCATTT
CTTGGGACGCAACCTCGCGTTTTTAGTAATAAAGTTGAGATTTAGTTGAT
GATGTAACCTTTAAACTTTTTCCAATTTATTTTTAGTATCAGCAAAGGGG
CTTTTCACATCGAACGGTGGCACGTGGACCAAAATGTATCATTGGATGAA
TTGAATGGATGAGAAACCGCCCGTTTTCCGCCCTTCCGAATTCCCATGCT
CAGGGATAGTTCGGACATATAGGGTTACGATTCGACAGTATACTTCGTGA
TTCGTGTATTAATGAAAGTCGATTGGAATACGGAGCCACTCTTAGATGGC
CTGGGTAATCAGGACTGATTATGTTCTATTAATGATGCCCATCCGGTGGT
TAAGGGTAAATTCTTCAAAACGTTGTACCAATAAAGAGTGATTAAAATGA
TTCACAGGTGACGCCCATTGGTTACGCCCACTAATGTTACTTATATTTTT
TATACAAATCATGCGTCATCAGATCATCAGATGATACGCATTGGCACTCG
TATTAGTATATCTAATATGTAGTTTCATTTGCTTTTTTTTTATAAATTCA
ATTTTTGACTATTTTAATCATTCAAATTATGACTCGCATAATTTCAACTA
AACGCTAGCGCTATTTATACATTTGTAGGATAGGAGCGAACAGATAACAG
CACAGCACAACTATTTATATATTGAGGAACAATTTAATTTAAAGGAGAAA
AGTGATTACCGCTTTTTAAGTGCCTAACTTCACCTTCCACGGTCGTTGGA
AATGACTTTCCAAATGCATTCACAAATGATAAACACAAATCCTGT

Coding sequence (CDS) from alignment at scaffold_92:247552..259046-

>TCONS_00073466 ID=TCONS_00073466|Name=TCONS_00073466|organism=Clytia hemisphaerica|type=CDS|length=1689bp|location=Sequence derived from alignment at scaffold_92:247552..259046- (Clytia hemisphaerica)
ATGGTTCCGCCTTGCTTCTTATTGCTAATCTACTTGATTAATCCAGTTTT
TGGTTCATGGAGCTCTTGGAGTTCGATCAGAGGATGTTACAACAAAGATA
TGTTCGGTCCAAAGGTCAACAAACACAAACGAACATGTTCCGGTAGTTGT
CCCACTGGTACCAATTCCATCCAATTCGGATATGCATGTCATGAAGGATA
TACTGCCCCGTATATTATAAAAGATGATGGCACACGTCCCAACTGTGGCG
GTCCATTTATTTGCAAAGCCACTTATAATTTTGATGTGCAGTTCCATTTG
AATTTTCATCTCATGAACTTTCCTACCAGTAATCTTGATATCATTGTTGC
CTCCAACAAAGACGTCTCAGGGGATGCTGAAATCAAAATTGAAAGTGTCA
ATCATGTTGACGACTCCAACTTAAATCTGGCTTACACGAAGAATCCGTTT
GATTTCACGGCAACACATTTTGTTGCGGATCGCTATAGGGCCCAGACAAC
AACATTTGGTTTTAATTCAGTTGTTGTTGATGGCAACAGATTAAAGATTA
AAGCAACTGGAAAGATTACATCAAACTCTCAACCCTCTTCTCAAGCAGTA
CTTAGTGCTGGTTTCCATTTTCAAAATTCCAATATGGATGCAGATGAGGC
TAACGAGACCATAATTATCCTTCAAAACAAGCGTGAAAGAGCTGGTAGCA
GCCTCAAAGGAAGTAGTGATATCATAAATAAGGGAGCCAGCGAATTGAGT
GGTGCTCCAGCTATGATACTGAGGCCTGGCTTTGTTTATCCATCATCAAC
GGAAATAGGGGCAACTGGTGAAAATCAAATCTATGATCTTACACATCGGG
TTTACATCCCCAAATTACAGTTCAATATCCATACTAACATTTACTGTGAT
ATGGCGTCTGGTTACAGTCCAGAAAAATTAACCATGTGGACGAACACTGA
GAAAAGTCAACACGTGCTTCAGGTGTCTACATTATTCGCACAAGGAGAAG
GTATCTTAACAAAACATAAAATGGTAGATATTGATAATGAATATTTCACC
AACACCTACATCGTTACTAAACCAGCCAGAAGACTTCATTATGATCGGGT
TTGGTGTGATCGACCTTTAAACGATTGTTCAGCTTCCAACACTTTCACCA
CAGTGACTAATACATGGTCTAAAGAATTCCCCTTATACAAAGAAGAATCA
CAGACAGAGCCTTACGTACCTTATCGGATTAAACAACTCCAGAGCGGACT
GTGTTGGGAATTCAAAGACAATGTCATCATCTTATCCTCAAAATGTCGAG
ATCGATTTCACTTCAATTACAAATTGGAAATCTTCCATTCGGAGACTGGT
AAACAGTTATATCTCCATGGCAACGGTTGGAAAACGACACCAAGTTCGGC
TGGATTCTTCAATAAAGAGCATGGATCTTATACTGCTATTATTGCTGGAT
GGCGCTTTGGAAAATGNGTTGGAAAACGACACCAAGTTCGGCTGGATTCT
TCAATAAAGAGCATGGATCTTATACTGCTATTATTGCTGGATGGCGCTTT
GGAAAATGCTTTATGGAAGGAAATTATGGTCACACCGCTACTGGCATCAA
ATACCAATCAAGCCTTAAATGCACTGCCAACAACACTCAAATTCTCTACC
GACCTGATCTTTCGGAGCATTATAATAAGATTAACATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045597XLOC_045597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073466-exon-scaffold_92-1575043694:258994..259046TCONS_00073466-exon-scaffold_92-1575043694:258994..259046Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:258675..258730TCONS_00073466-exon-scaffold_92-1575043694:258675..258730Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:258369..258521TCONS_00073466-exon-scaffold_92-1575043694:258369..258521Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:257210..257389TCONS_00073466-exon-scaffold_92-1575043694:257210..257389Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:256674..256858TCONS_00073466-exon-scaffold_92-1575043694:256674..256858Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:255706..255920TCONS_00073466-exon-scaffold_92-1575043694:255706..255920Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:255040..255232TCONS_00073466-exon-scaffold_92-1575043694:255040..255232Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:252952..253195TCONS_00073466-exon-scaffold_92-1575043694:252952..253195Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:252094..252533TCONS_00073466-exon-scaffold_92-1575043694:252094..252533Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:250397..250496TCONS_00073466-exon-scaffold_92-1575043694:250397..250496Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:249565..249617TCONS_00073466-exon-scaffold_92-1575043694:249565..249617Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:248882..249124TCONS_00073466-exon-scaffold_92-1575043694:248882..249124Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1575043694:247552..248260TCONS_00073466-exon-scaffold_92-1575043694:247552..248260Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:258994..259046TCONS_00073466-exon-scaffold_92-1510915933:258994..259046Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:258675..258730TCONS_00073466-exon-scaffold_92-1510915933:258675..258730Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:258369..258521TCONS_00073466-exon-scaffold_92-1510915933:258369..258521Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:257210..257389TCONS_00073466-exon-scaffold_92-1510915933:257210..257389Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:256674..256858TCONS_00073466-exon-scaffold_92-1510915933:256674..256858Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:255706..255920TCONS_00073466-exon-scaffold_92-1510915933:255706..255920Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:255040..255232TCONS_00073466-exon-scaffold_92-1510915933:255040..255232Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:252952..253195TCONS_00073466-exon-scaffold_92-1510915933:252952..253195Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:252094..252533TCONS_00073466-exon-scaffold_92-1510915933:252094..252533Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:250397..250496TCONS_00073466-exon-scaffold_92-1510915933:250397..250496Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:249565..249617TCONS_00073466-exon-scaffold_92-1510915933:249565..249617Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:248882..249124TCONS_00073466-exon-scaffold_92-1510915933:248882..249124Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1510915933:247552..248260TCONS_00073466-exon-scaffold_92-1510915933:247552..248260Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:258994..259046TCONS_00073466-exon-scaffold_92-1491911889:258994..259046Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:258675..258730TCONS_00073466-exon-scaffold_92-1491911889:258675..258730Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:258369..258521TCONS_00073466-exon-scaffold_92-1491911889:258369..258521Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:257210..257389TCONS_00073466-exon-scaffold_92-1491911889:257210..257389Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:256674..256858TCONS_00073466-exon-scaffold_92-1491911889:256674..256858Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:255706..255920TCONS_00073466-exon-scaffold_92-1491911889:255706..255920Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:255040..255232TCONS_00073466-exon-scaffold_92-1491911889:255040..255232Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:252952..253195TCONS_00073466-exon-scaffold_92-1491911889:252952..253195Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:252094..252533TCONS_00073466-exon-scaffold_92-1491911889:252094..252533Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:250397..250496TCONS_00073466-exon-scaffold_92-1491911889:250397..250496Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:249565..249617TCONS_00073466-exon-scaffold_92-1491911889:249565..249617Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:248882..249124TCONS_00073466-exon-scaffold_92-1491911889:248882..249124Clytia hemisphaericaexon
TCONS_00073466-exon-scaffold_92-1491911889:247552..248260TCONS_00073466-exon-scaffold_92-1491911889:247552..248260Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073466-proteinTCONS_00073466-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_92supercontigscaffold_92:247552..259046 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.596949	0.502739	0.199696	0.255486	1.70152	1.28673	0.680259	1.22471	1.66917	3.95097	0.632279	0.605382	8.42748	8.51776	1.04001	1.12436	1.94528	1.68068	9.47528	6.06683	3.08258	2.62966	1.30668	2.9699	4.85058	8.30705	0.353458	0.15883	0.105408	0.153421
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073466 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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