TCONS_00073712 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073712
Unique NameTCONS_00073712
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1461

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073712 ID=TCONS_00073712|Name=TCONS_00073712|organism=Clytia hemisphaerica|type=transcript|length=1461bp
cTTGTAGAGTATAACAGTAACACTTCAAGATATTTGAATTTTGTTAATAT
AAATGCTGAGTTTAAATGGCACTGGAACAAATCGCGTAACACTGAaataa
cttttaataaaatagcGAAAATTATTTTGGATATGTCGTTGGTATcagta
agaaaaataattttttgcattttattGATTTTGGCTCCCTTTGATGGAGT
TATATGCACTGATGGACAATCGATCACCAAATGTATATGGAACAGTTTGG
GGAAAGATAACCAATGTATCTTGAATGCTGGTCAATATAATGACGTCACA
AAGATCAACAATCTTCATGGACCATCATCCAGTCGACCTATTGTCATAAA
AGGAGATTCGTTGAAAAAGACAGTCATTTCAGGCGTAATGGAAGTTAAAC
ACAATGGTTGGGAAACAGATGATGGGAGGATTTATAGGACCAAGCTTCCC
GAAGATCATCCGGACATTTGGCAATTATTCATAAATGACGTCATGATGAC
AAATGCAAGATGGCCCAACTCAAAATGGTCTGACAAAAGTATTTTCCATG
GAAAATTTTGGTCCAAAATGGATAAAGGTTCTTCACCAGGGAGAGTTAAA
ACCGGCGGCTATGGGCAAGTGATGGATTCAGATTTATCTCAGTTCGATGG
AAAAGGCCTCGACGGAGCAATGGCCATTTTGAATATCGGAAGTTTCAATA
CTTTCGTTGGGAAGGTTGAAGATTATGGAAAAGAAGGAAATGATTCTTTC
AAATTTAAGGACACATTCGGGAAATATCATTTCAAAGTCAAACGTTGTCG
ATATTTCCTAGAAGATCATATAGCATTCCTTGATCAACCTGAAGAATGGT
TTTATGAACGATCCACACAAACACTTTACGTATATCCACAAGAAGGAGTT
GATCTCAATAACAAAGATACCGCCATCTTTGGCAAAATCACCACTTATTC
TCTCACTATTGAGAAATCATCCAATATATTGATTCAGAATCTGGAATTTT
TCGCAACAGCGTTGTATATCGTGGATAGTTTTAATATAACTGTTGATTCT
TGTTTATTCAAGTTTCCATCGTATTCCAAACGAATGCTGGGAGATACCAG
TCTCATCCAATGGACAAAAGTGGATGGGAAAAGTCAcaatgtgaaattca
tcaacAATGAATTCTATGGATCAGATGGTTGTGTTTTACAAGGAGGGAAA
GGTGCTAAGGATATGGTCATTGAGAATAATCGGTTTGAATTCAATGATTG
GAGTGGAGCCAATATGGAAAGGATGATGGGAGGTATGTCAACTGTAAAAA
CAGATGGAGAAGGGAGTATAATGAGAATGAATACTTTGAATAATAATGGT
GCTAACGTCGGGTTGAGACCAGGTACGAATTCAATTGTGACGATGAACCG
CATCACCAGGCAATGTTTTGGTGTCATTCAAAATGATGGTGCAGGTATAC
AACTTCAACNG
Run BLAST on NCBI

protein sequence of TCONS_00073712-protein

>TCONS_00073712-protein ID=TCONS_00073712-protein|Name=TCONS_00073712-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
LVEYNSNTSRYLNFVNINAEFKWHWNKSRNTEITFNKIAKIILDMSLVSV
RKIIFCILLILAPFDGVICTDGQSITKCIWNSLGKDNQCILNAGQYNDVT
KINNLHGPSSSRPIVIKGDSLKKTVISGVMEVKHNGWETDDGRIYRTKLP
EDHPDIWQLFINDVMMTNARWPNSKWSDKSIFHGKFWSKMDKGSSPGRVK
TGGYGQVMDSDLSQFDGKGLDGAMAILNIGSFNTFVGKVEDYGKEGNDSF
KFKDTFGKYHFKVKRCRYFLEDHIAFLDQPEEWFYERSTQTLYVYPQEGV
DLNNKDTAIFGKITTYSLTIEKSSNILIQNLEFFATALYIVDSFNITVDS
CLFKFPSYSKRMLGDTSLIQWTKVDGKSHNVKFINNEFYGSDGCVLQGGK
GAKDMVIENNRFEFNDWSGANMERMMGGMSTVKTDGEGSIMRMNTLNNNG
ANVGLRPGTNSIVTMNRITRQCFGVIQNDGAGIQLQX
Run BLAST on NCBI

transcript from alignment at scaffold_97:298047..309596-

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073712 ID=TCONS_00073712|Name=TCONS_00073712|organism=Clytia hemisphaerica|type=transcript|length=11550bp|location=Sequence derived from alignment at scaffold_97:298047..309596- (Clytia hemisphaerica)
CTTGTAGAGTATAACAGTAACACTTCAAGATATTTGAATTTTGTTAATAT
AAATGCTGAGTTTAAATGGCACTGGAACAAATCGCGTAACACTGAAATAA
CTTTTAATAAAATAGCGAAAATTATTTTGGATATGTCGTTGGTATCAGTA
AGAAAAATAATTTTTTGCATTTTATTGATTTTGGCTCCCTTTGATGGAGT
TATATGCACTGATGGACAATCGATCACCAAATGTATATGGAACAGTTTGG
GGAAAGGTAGGTAGATAACCATTGAGTTTAAAACCTAAAAGGGGCTAGAG
ATGAATCTTCTTTCTTTCGTAACAAAGAATAAGCGAAACCTTTTTTGAGC
CGTTTCAGAATAAGAGTTTGAACTCAAAAGGTAGATAAATTTTTTCGACG
CTCTCCATTTATTTATGTATATATGAAACAGTCTGGGGAAAGGTAGGTGG
ATAACTTTTGAGTTTAAAGTACCGTGAGTACCTCAGTTAAGCTTTCTCTG
AAATTAAGCTGTGGAGCTAAACACATCCCCTTCTCACAGACCCACCGGGA
CCCGTTCCCACTGGAAGAATTAGCCAAAATATCGTCCCAGGTGGAAAATG
ATCCTCTAATTTTTTTCCCACTGTAGATAATCAAATAAACCAATCCTCAC
TGCAAAATATTATGCTATTTTTCCTATACACACTGAATTTTCTGACTTAA
AACAAAAGGATTTAAATCCCCGGCCATAAAAAGTATGTAATCAATGTAAA
AGTATGTATCAATCCGCATCGTGTTTCAGTCCATCATTTTTAAGCAGATT
ATAGAATTACCTATTTCCAGTTTCTTTTAATTCTTCTGAACTATAATTCT
TATAACAAAAGCCTTTTCTGACTCCTAAGTGTGTGTAGTTCATTTCGTTA
AAGGGACATAACAGTACTTGCGAAATTTGTAAACAAGCTGTATGCAGCGG
ATACAAAATCAAAACAAATGTCACATGTCAAAATAAAAAATCAAACCAAA
TATGGCTAGTTTTTATTGTTCAATTGTTTTAACAAGTTTGTTTTGGACAC
GTGATTTTAATTGTTCTCTTTAATGACACGTGGTTCTTGCAATGTTTACA
TTTTACTACTTTAATGTCCCTTTAAACTTAAACCAGGTTATTATAAAGTC
AAGAAAGAAGGAAATATAAACATACCCTTTATCTTCATAGATAACCAATG
TATCTTGAATGCTGGTCAATATAATGACGTCACAAAGATCAACAATCTTC
ATGGACCATCATCCAGTCGACCTATTGTCATAAAAGGAGATTCGTTGAAA
AAGACAGTCATTTCAGGCGTAATGGAAGTTAAACACAATGGTTGGGAAAC
AGATGATGGGAGGATTTATAGGTAATTACATCCCTGTGTCACAGACCCAA
GTTTGACAAAAATTTCGTCCCCTGTGAGAAAATACCCTAAAATTTCAGCC
CCGCTGGGAAATTGACTTTGATTTATCCCCATTTGAAATTCAATGCTTAA
AAATTGAACTATTTCCATTGGGAATTCAATAGAAATTTTTATGCCCATTT
GAGTCAAGAGCTTCCACCGAGGCTTTGAGACAGGGGTGTGTAATTAACAG
TAACTGGAGCCCCGGGGGGGGGGGTTACTTAGGCAAATGTAGGGTACGGT
ATGTGCCGCCCTTAAGGGTACCTTTTTTGGATTTCCAAAGTCCCGCTAAG
GGTCGGAAAAATCATAAAATCTAATTTCAGTTCCACTAAGGGTCGGAAAA
ATAGGAAAATTTCAACTTATTACCCCCTGCAAAATCGAAATTTGGTCGAA
ATTGGTCAAATTAGTCCCGCTAAGGGTCGCAAAACTTCCAAAACTTTCCT
TTGTTTGTTTTCTCCTTTTTAGTCCCGGTAAGGGTCCAAAGTTCGAAAGT
CGGGCCCCCCCACCCGGACTGGAGCCACACAAAATTTCACCAAAATGAAA
CATAAACAAGTTACTAGTATTTGTTTTAAGTGGTCCACCCGCATCAGAGA
AATCTCAACAATAAACTATATTTCTGTCAACGTCACATAACTACAATGAA
AAGTTTCAAAAGTTTTCTGCAACTGTTTCTGTCCAGACCCGAATGACGTG
TATAAACGTTCTGTGAAAACTATTTTTTTTAGACTGGACATTTCATTTTT
ATTTGACGAGGACAAAATTATGGATACAAAATGAAAAATTGCATACAAAA
CACTGCTTTTAAATGAACTTTTTTTTGTATATAATACGTGCTTTTCATCA
AAAGCTGGTTTGGAAGTAAAATTTACCGTTAGAACTTGAAAAATGTAAAA
TACGAAAACAAAGAGATTGCTAGATCATATCCATCAAAATGCAGCGTAAA
TTTTAAGGCTTCACTTTTTCTAGTCTGTACACAGATCCGGCGGCATCTAC
AGCTAATTTGAAAATTGCCGTAGAGGGTCTGTTGTCATTGTTGTTTCTGA
TTTGAGATTTTTCAAACCGACCGCTGCGATGGAGTGCGGGTGGGAGAGGG
TAGACGACGGGAGAAGTGTTGCTATTTATAAATCATACTTCATCGCAGAG
GTTTCCGTACGGGAATTTTTATATCAAACATACGATGCACACAGAGTGAA
CTACGAAGCGAAATACGTGAGGTACACTCTGGTACAGAGTACACTTTTTC
ATGTTTGGGAAAATTGGAAGATTCGGCTTGAAACTTAAATATATTTCTCA
CTAGGACCAAGCTTCCCGAAGATCATCCGGACATTTGGCAATTATTCATA
AATGACGTCATGATGACAAATGCAAGATGGCCCAACTCAAAATGGTCTGA
CAAAAGTATTTTCCATGGAAAATTTTGGTCCAAAATGGATAAAGGTTCTT
CACCAGGGAGAGTTAAAACCGGCGGCTATGGTAATTTCATTTATTAGTTT
TTATGAGATTGTTTCACCATTTGGGTGAATATGAAAATAGGCCTGATTTG
GGGCAAATAATTTAAGATTTTTTTTTCAGCGAGTATGGTCGATTTCTGTA
CTGAGAGGGACTTATTTGATGTAGAAGTGGTGATTTTTGGTCATTTTTGG
ACATAAACAGCTTTCAGATTCTATAATGGGTTTTGGCTTAAAACGAATTT
GAAATTTTCATAAAAAATTGTAATCCCTTTAAAAGCGTCCCAGTCCTTTT
TTCGCACCTATAGACAATAGAAAAAGGTGTCAAAAAAGGATTGGATCGAG
TTTAGGGAGGTAAAACGGACAAAAAAATGCCCACACAGCAATTGGCGGCT
ACGGTCGAAAAGGTGTATTCTGCTTGCACATTCCTCTAAGTAAACGGTTG
ATATAGATAAAGGTGATCGAGTCAAACCTTCTTTGTAAGAAATGAAGCCA
TTTGTTCCCTTCATAAGTTGCGCGGACCGCGTGGTTTGCATGTAGACGCT
GGGTTAATAGAAACATTTGAAATTGAAAAATGTAAAACGCGAAAACAAAG
AAGGTACTAGGTGAAGATTCGCCTCTAGTCTCAATATTCTAATCATCCAT
AGGGCAAGTGATGGATTCAGATTTATCTCAGTTCGATGGAAAAGGCCTCG
ACGGAGCAATGGCCATTTTGAATATCGGAAGTTTCAATACTTTCGTTGGG
AAGGTTGAAGATTATGGAAAAGAAGGAAATGATTCTTTCAAATTTAAGGT
ATGTTGATGGTTTTAATAAAATGGTACACAAGCCTGTCTGAATTAGCGGT
AACTAATTTTCACGGGAATTAATTTTCGCGTTTTTTTTAAAACCGTGAAA
TACAATTTTTTCCAATTTTATCAAAAATTTGAACAATCCCTAGGTTAGGA
AAATGAAAGAAATCTGTCCGATAAGGGCAAAACCACGAAAATTAAAACCC
ACGGAATACAATTTTTCCTTTTTTTTCGACGACGAATATTAGTTCCTGCG
AAAATTGTTCAAATAAGATTCACTTCAGGCTTCTTTTTAGACTCGATCAT
AAATGGTAGCTCTTAATTTTGTGTTTTTGCTTATATCTATGCAAAATAAA
ACAGTCCGCCAGATTCTTGTCGTTTTTGGAAGGTAAAAAATGAATAGGGA
AATATTTTCATTTGAACTGTTGATCATATTGGTTTCTCATGCTTTATGAA
TAAGCCGGTAATTTTAATTGAGGACCCGCTTAAAAGAAAGGTATCGAAAA
GAGCTTTCCAACGAACCCAAACATGACAATCTTTGCTTTAGCCAAATTCG
AGAATTTCACATTTCAAGTTTACGCACCAAGGTTTTAAGAATCCTTAAAT
TTCATATTCACAAGGCACTAAGTAGTTAATTTGTATACCGATTTTAATTC
TGACAAATATATTTTACAAGTAAGTCTGCGACCACAGTCGGAGGCGACCC
GAAGGCTCCTCTTTCGATAGCTGTCTACCCGAGGGTAGGGGGGGGGGCAC
CACTCTTTCTCCCTGGATTGCTCCACTTACCCTCGATCCTTCTCTTAATT
GCTGAGCATCAAGCAGAGAGATATCAAGTACCATTTTGGGAATCTTTGCT
ATGACCCGGCTGGGGGTGAACCAACAACCTTGCGAGCCGTATCCGGATCC
TCAAACACTGCACTACGCTAAATAAATATTATTATACATATAGCGGTCAT
TAAGTTAGTCATTAAAGATTCGAACAGCGGGCGGTATTGAAAGTTTCTAT
GACTCAAATAGTCATACCCGCGCTGAGAAAACTAAGGCGTCGCGATTCAG
AGGGCTGAAATATCATTAACCGCCCTGGTTATAGGGCGATAACGTCATTT
GCAGCCCGCTCGGAACTTTATTGAAGTCGTTGCATTGAAGCGGTGAGACT
AAACCGACGTCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ATAGCGTTAAGCTTTCGTTCGTTGTTGTCATTAATTCTGCCCTTGCAGTT
TGATTATTAGCCCTCTAGTGCCATTTGCGCCCTCCGCTTCGCGTCGGGCC
TAAATGACACTCTCGGGCTAATAATCAAACTGCGCGGGCAGAAAATAACA
ACAACGACCTCAACCTGAACGCTATTGTTATATTATATTTTGTACACCTT
TTCAGGACACATTCGGGAAATATCATTTCAAAGTCAAACGTTGTCGATAT
TTCCTAGAAGATCATATAGCATTCCTTGATCAACCTGAAGAATGGTTTTA
TGAACGATCCACACAAACACTTTACGTATATCCACAAGAAGGAGTTGATC
TCAATAACAAAGATACCGCCATCTTTGGCAAAATCACCACTTATTCTCTC
ACTATTGAGAAATCATCCAATATATTGATTCAGAATCTGGAATTTTTCGC
AACAGCGTTGTATATCGTGGATAGTTTTAATATAACTGTTGATTCTTGTT
TATTCAAGTTTCCATCGTATTCCAAACGAATGCTGGGAGATACCAGGTAA
ATATTAAGTCTGCCCCAAAAGAATTGGTAGTGATATATAGGAGCGTGTAA
TTCGAACTCGAACGAGGAATTTTATTTGTTTGAATTACAGGGAGATTTTA
ACTATAGAAAGTATTTTAAGAAGGTTTCTCCTTGACTGGGACTGGAAGGA
AGTTCAAATTATAGAAAGAATGGATTAACAGAAGTTCGAATAACCAAGAG
TTAATTGTATTTTTCTTTGGCTCAGATTGTAATCTCTCTTAAAACGGTAG
CTGGGTAACCATGTAGTTCTTCCGGAAAGGGGGCGCACTCAGGTAAAGAG
TGGTACAAGGATGGCCTAATTTCAAGTTCGTTTGTGTTCTTAAAAAAAAA
AGTCTGTCTCAAAATAATTTGCAGCTGGAGAAAAAATTGGCTGTAAATTA
TTTTGAGACAGACTTTAGTTTCTCTTGATAAATATTTTTATTTTTAAAAC
CACACGGTCAACTCTCTCTACACGCTTTTTTTATAAGAATACACTTTATA
AGAATGTCCATGATAAAAATGGCCAAAGAATTAAGAATAATGCTTAGAAT
ATCACCATCGTGGAATTTTGCTACTCAAGCTAAGAATGCCATTTTTAGAG
CACTTTCAATTATAAATTGTCAATCACCCCCAAGTTTTACAAAAATGCCG
TTTTATGTTAAATCTTGTCACAATTAGGATCCTAAACTAAGAATGCTGTA
AGAATATTTTAGGATGATTTTCCCAAAAAAAAATTAAGAATATCCATGAT
GAAATGGATTTACACCATTCTTATAAAAAAAGCGTGTACAGTTAACGCTC
TCTAATGCGATGTTCTACTATTCGATACGCTCCATTATTCGATAATAATA
AAAGTCACCGTCAACGAAAAACTCTCATAAATGACGCTCTTTTATTCGAT
ACGCTCCCTTATTCGATGAAAATCCGATTCCCCTTGAAAATCGAATTGGA
GAGCATCAACTATTTCGATATTCAGAGGGAACCAAGGATCCAAATATTCG
TATTTTAGGGGATCAATATTGCAGTTTGAATCAAAGAAAGGTTTTTATTA
TAGAGAAAGTTGACTGAATTTTATATCTATAGTATCTGTAAACAAAGAGC
TTTAAACAAAAGCTTTCTTCCCAGCTGGCACCCAGCTGGCACCCAGCGTT
GTTTCAACGTTCATCTAACGTTATATGGACGTTATGAACGTTGTATGGAC
GTTGAAATAACGTTGTGTGCCGGCTGGGTTACTCCTCTTTTGCACTAGTC
TCATCCAATGGACAAAAGTGGATGGGAAAAGTCACAATGTGAAATTCATC
AACAATGAATTCTATGGATCAGATGGTTGTGTTTTACAAGGAGGGAAAGG
TGCTAAGGATATGGTCATTGAGAATAATCGGTTTGAATTCAATGATTGGA
GTGGAGCCAATATGGAAAGGATGATGGGAGGTGAGTGTTTATAGAGTACA
TGTATTTTTTTTATAAGCAAGTGTCTGCTCCTATGTCAGGCTCGCATTAT
GCTTAGCATCCTATTGTTCTCAAACAATAGAGCCATTGTTTGGGTACCAA
AAGCTGTGCCTGTATATAAACGGTATGCTTATAAAAGAAAAAACATGTAC
AGAAATAACCTTAGCCCGATTCGCAAATTTTGGTGTAATTTACAGATATT
ATTTTGGCGATTAAAGAATAATTTCTTAAAGGGATTATCAGATGATTTTT
GGTATTTGATATTTTAAATTACCTTTTATGGCCATAAGAAATACACATCC
AAAGTTTTTGAATCAGTTATTTTCCAAAACTGAGATATTAGACTTTGAAT
TTTCAAATTTTTACTTGAAAACAATAGGAATTCAACGTCAAGACTGTGTA
AAGACTCATTTTTAGATATTTCAAAGGCAAATATCTCAGCTTTGGAAAAA
GATTGGGTCAAAAGATTTAGAGGTGTCTCTCTGGACCATAAAAGGTATCT
CTAAGCCAAATATATAACCATCTGATACCACGATATATACTTACGACTAA
CAATCAGAAAATTTCGTTTAACAATCAAATCAAAACATTTCTACTGAAAA
TTTCCGAATAATTCGAGGGACGAACAAAGCTGGCTGCCTGACAAAATCTT
CAAAAAGACCTTTTCGGATAATGTGCCAGCTTGGTTTCGTCTCATTCAAA
GTGGCTGTACCACAGCATTATTCGAAGTTTTGTAACGTTGACTTGATTAT
TGAACGGAACTTTGGATTGCTAACCTTCTGGGTAGCTGGTGGACAATGTT
CGGACAATATAGTTTGCGGACCAGAACGAAGTAACCAATGGGCACAAACG
TCTTTTGGACGTCTAATGTACGTTTCCAAAACGTCCAAAGGTCTTAAAGC
CGTCCATTGAATGTCCATAAGGTGTTACATGCCCATAGGGTAAACCATAC
TAATTTTTTTTGGATGTGTGTGGTATAATGTTTGGGTACGAAGTGGGACA
GTGGATGGGTGTGGCATAATTCTTGTTCGGGTACGAAGTGGGACAGTGGA
TGGGTGTGGCATAATTCTTGTTCGGGTACGAAGTGGGACAGTGAATGGGT
GTGGTATAATCTTAGTTTGGGTACGAAGCGGGACAGTGGATGGGTGTGGT
ATAATCTTAGTTTGGGTACGAAGCGGGACAGTGGATGGGTGTGACATAAT
TCCAAATTGGGTACTTTAATGGAATAAACTTTCGAGGGGATTAAATTTCG
CGGTTGGGCCTATCCGCGAAATTCAAAAATTTGGCGTGGCATTGTTTTCT
CAATTTTGTGACTTTTACTGTCAAATCATGCATGTTGGTTGTTGAAATAC
ACATTTTTTGCGCTTCATTCATGCAAGTAACCATACAAATAGTATTATTT
GACATATTTTGAGTTTTGTTTAGAAATATTTCGCAGATGAGGCTATTCCA
AATTTCCAATGGGTCTTAATTTCACGGATTTTTGCGGATGACATCCAAAT
CCGCGAAATCCGCGAAATTTACTCCCCGCGAAAGTTTATCCCATTAAAGT
ACGAAGCAGGACAGTCGAAAAAAATAGTCGTTTTGCGTGCGATGAGGGAC
AGCCGAAAGCTACAGAGAATTTTTTGGTCTGTAAAATTGATGTTAGGCAC
GAAAAGACAGTGGGACAGTCGCTTTCACTGTCCGGGTTATAATGTACCAC
GCTAACTCGACCTGGTCAAATATTTTGTGGAACTTTTGAAAAGTTTACAG
AGTTTTCTTGCCTTGAGCAAGAAAAAGTAATTTTGAAGTTTTTTTTTTCT
TTTTTGATAGCTCGACATAGAGTGGGTAACTCTCTGAAGTGAATAGGCCT
CATGGGCGAGAGTCATGACTCTATGTCCAACCTTACCCAGTAATGGGTGG
TTGTAAATAAATTATTATTATTATTATCTGGAATTACGTCCTATGTTTCT
TTCATAGGTATGTCAACTGTAAAAACAGATGGAGAAGGGAGTATAATGAG
AATGAATACTTTGAATAATAATGGTGCTAACGTCGGGTTGAGACCAGGTA
AGGATAAATTGAGTTGCCAAATGTCGACAATTAGTCTAGTGGCCAAATGA
CCCATTTTTTGCCTCAAACTTTTACGAGTAGTACAGAAGGCATTGCTAAC
TAAAAGGACAAGAAAACTTGTTTGATTTAAAGAGACATTCAAATTACAAA
TGTTCCAAAGACTCTGCTGTACAGGGTGTCCCTAATTAAAGTATCGAGTC
GAAACACAACTATGAGTAGAAAGTTTTATGTGCATGTTCACAAATTTGTA
TTTTAAGCTCTCCCTCTTTTTTCTTTGTCATTACGATTAATTTATACGTT
GTAACTACCTTTTGTAATAAGCCTGTGTGATGGAGAACGTTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTTCCAGAAAAAAACCGTATACCCCCTGTTG
AGGAGGTCCATTTCCGTTCCAAGGGGGTAAGGTTTGATATGTGGCGGAAT
TCCATAGGGAGATATAAAAATATGTCAAAAATAACTGGAATTCCATTGGG
GTAGCCTTTTAAATCCTACTAAAATTCAGAATTCCAGGGAGTTTAAGCCT
AAAATTGCCTGGAATTCCAGGGCGTTGAATCATTTCCAGCCACAAAATGA
TGGACCTCCTCAACAGGGGGTATACGTTTTTTTTCTGGAAAAGCCCAATG
GGGATCAAGTTAAAGTCAATTTCCCAGTTGGGCTTGAATTCCAGAGTATT
TCCCCACCGGGTACGAAACTTTCGCGGAACTTTCCAGTGGGGCTTGGGTC
CCATACAATACAAATTTGTAAGGATAACGTATCCATGAAAGCGTCAAATA
ATGCCTATTAAACCTTTAAATTATAGCTTGGATGCGGTGCTATAGAGAGC
GGCACTAATCGGAGGGCGGTACTAAACATACGATATTCTTGAAATGTTAC
CGTACTAACGGCTACTGTATCTATCAAAAAGTCTGCTCAACAATCAATTG
CTGTTCTGAACACTGATTGGTTTATTTGATTGTTGAACGAATTTTTGACA
GCCCGGTTTAAGTACAGTTAATCAGTCTCGATTTTCCATTTAAAGGTATT
CAACTCCCCTAAATACGGGATTCGATTTGATGGTCAGTTACCGAATATCG
GAACAAACGGAAATATGTCTTACAATGTGGTTTGGCGGTGTAACGGAATG
ATGGTCAAAGGTGAGGCATTTGACTAGACTCGTAGACTCGGGGTCATTCT
TTGTATTCTTTCGCGAACATTGCATAGCTGAACACTTAACCGTTCATATT
TTTAAGTGTATTTTCTCAAGCAACCTTGCTTCCCTCAAATCAAATACTTC
AGACAGTGAAGGCAAAAGCCGGAATCTGTGTCACTCCAAGACTCTGGAAA
AGTTGAGGTGGGCAAGAGGAGCAAGGGGAACTGGAAATGGGTCAAGAGGC
AAGGAATAATTGGAATAGAAAGATGGGGAACAGCTCAGCAGGGCAAATTG
GGTATGTAAATGGAAGGGGACGCTGTATACGTCCTAATTCAATTGTCTAT
CTCCTTTTTGTTATAGGTGATTACCACAATGTGACAAACAACCTTGCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTGATGGAGAACGTTCTTATATTTTAGCTATAACACACACA
AACTTTTCTACTCAATCGCATGTTCAAACTCGATACTTTAATTAGGGACA
CCCTGTATATACAGTATGTTTTTTTTCTTTTCTTTTTTAAATCCCATTGG
GACTTCAAAACCAGTTTTTGCCAAACTGTCAAAGCTGGGGAAATTTCAAT
AGAGTATTTAAGTTGGTCAAGACAATTTGGACTAATTACCCTTAGAAAGT
CAATTTTTTAAGTCCTAAGGGACCATATAATAAAAAAATAAAATAAAAGC
CCATAAACCCGAACATAGCTCATAGCACATAGCTTTTTTTAAGGGCGAAC
CAAGACCTCGCCCGGACTTAACTGGGACGGAGTAGTTCTATTTAGTTTTT
ATATGTAAAATACCTCCTTGCACGATTAGAACTTTTGTAAAACTTCTTTT
CCTGAATTTAGGTACGAATTCAATTGTGACGATGAACCGCATCACCAGGC
AATGTTTTGGTGTCATTCAAAATGATGGTGCAGGTATACAACTTCAACNG

Coding sequence (CDS) from alignment at scaffold_97:298047..309596-

>TCONS_00073712 ID=TCONS_00073712|Name=TCONS_00073712|organism=Clytia hemisphaerica|type=CDS|length=1461bp|location=Sequence derived from alignment at scaffold_97:298047..309596- (Clytia hemisphaerica)
CTTGTAGAGTATAACAGTAACACTTCAAGATATTTGAATTTTGTTAATAT
AAATGCTGAGTTTAAATGGCACTGGAACAAATCGCGTAACACTGAAATAA
CTTTTAATAAAATAGCGAAAATTATTTTGGATATGTCGTTGGTATCAGTA
AGAAAAATAATTTTTTGCATTTTATTGATTTTGGCTCCCTTTGATGGAGT
TATATGCACTGATGGACAATCGATCACCAAATGTATATGGAACAGTTTGG
GGAAAGATAACCAATGTATCTTGAATGCTGGTCAATATAATGACGTCACA
AAGATCAACAATCTTCATGGACCATCATCCAGTCGACCTATTGTCATAAA
AGGAGATTCGTTGAAAAAGACAGTCATTTCAGGCGTAATGGAAGTTAAAC
ACAATGGTTGGGAAACAGATGATGGGAGGATTTATAGGACCAAGCTTCCC
GAAGATCATCCGGACATTTGGCAATTATTCATAAATGACGTCATGATGAC
AAATGCAAGATGGCCCAACTCAAAATGGTCTGACAAAAGTATTTTCCATG
GAAAATTTTGGTCCAAAATGGATAAAGGTTCTTCACCAGGGAGAGTTAAA
ACCGGCGGCTATGGGCAAGTGATGGATTCAGATTTATCTCAGTTCGATGG
AAAAGGCCTCGACGGAGCAATGGCCATTTTGAATATCGGAAGTTTCAATA
CTTTCGTTGGGAAGGTTGAAGATTATGGAAAAGAAGGAAATGATTCTTTC
AAATTTAAGGACACATTCGGGAAATATCATTTCAAAGTCAAACGTTGTCG
ATATTTCCTAGAAGATCATATAGCATTCCTTGATCAACCTGAAGAATGGT
TTTATGAACGATCCACACAAACACTTTACGTATATCCACAAGAAGGAGTT
GATCTCAATAACAAAGATACCGCCATCTTTGGCAAAATCACCACTTATTC
TCTCACTATTGAGAAATCATCCAATATATTGATTCAGAATCTGGAATTTT
TCGCAACAGCGTTGTATATCGTGGATAGTTTTAATATAACTGTTGATTCT
TGTTTATTCAAGTTTCCATCGTATTCCAAACGAATGCTGGGAGATACCAG
TCTCATCCAATGGACAAAAGTGGATGGGAAAAGTCACAATGTGAAATTCA
TCAACAATGAATTCTATGGATCAGATGGTTGTGTTTTACAAGGAGGGAAA
GGTGCTAAGGATATGGTCATTGAGAATAATCGGTTTGAATTCAATGATTG
GAGTGGAGCCAATATGGAAAGGATGATGGGAGGTATGTCAACTGTAAAAA
CAGATGGAGAAGGGAGTATAATGAGAATGAATACTTTGAATAATAATGGT
GCTAACGTCGGGTTGAGACCAGGTACGAATTCAATTGTGACGATGAACCG
CATCACCAGGCAATGTTTTGGTGTCATTCAAAATGATGGTGCAGGTATAC
AACTTCAACNG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045768XLOC_045768Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073712-exon-scaffold_97-1575043694:309341..309596TCONS_00073712-exon-scaffold_97-1575043694:309341..309596Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1575043694:308226..308406TCONS_00073712-exon-scaffold_97-1575043694:308226..308406Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1575043694:306717..306892TCONS_00073712-exon-scaffold_97-1575043694:306717..306892Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1575043694:305949..306094TCONS_00073712-exon-scaffold_97-1575043694:305949..306094Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1575043694:303851..304191TCONS_00073712-exon-scaffold_97-1575043694:303851..304191Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1575043694:302417..302598TCONS_00073712-exon-scaffold_97-1575043694:302417..302598Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1575043694:300350..300439TCONS_00073712-exon-scaffold_97-1575043694:300350..300439Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1575043694:298047..298135TCONS_00073712-exon-scaffold_97-1575043694:298047..298135Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:309341..309596TCONS_00073712-exon-scaffold_97-1510915933:309341..309596Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:308226..308406TCONS_00073712-exon-scaffold_97-1510915933:308226..308406Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:306717..306892TCONS_00073712-exon-scaffold_97-1510915933:306717..306892Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:305949..306094TCONS_00073712-exon-scaffold_97-1510915933:305949..306094Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:303851..304191TCONS_00073712-exon-scaffold_97-1510915933:303851..304191Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:302417..302598TCONS_00073712-exon-scaffold_97-1510915933:302417..302598Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:300350..300439TCONS_00073712-exon-scaffold_97-1510915933:300350..300439Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1510915933:298047..298135TCONS_00073712-exon-scaffold_97-1510915933:298047..298135Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:309341..309596TCONS_00073712-exon-scaffold_97-1491911889:309341..309596Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:308226..308406TCONS_00073712-exon-scaffold_97-1491911889:308226..308406Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:306717..306892TCONS_00073712-exon-scaffold_97-1491911889:306717..306892Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:305949..306094TCONS_00073712-exon-scaffold_97-1491911889:305949..306094Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:303851..304191TCONS_00073712-exon-scaffold_97-1491911889:303851..304191Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:302417..302598TCONS_00073712-exon-scaffold_97-1491911889:302417..302598Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:300350..300439TCONS_00073712-exon-scaffold_97-1491911889:300350..300439Clytia hemisphaericaexon
TCONS_00073712-exon-scaffold_97-1491911889:298047..298135TCONS_00073712-exon-scaffold_97-1491911889:298047..298135Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073712-proteinTCONS_00073712-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:298047..309596 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.113347	0.0828987	0.0962533	0.0313896	0.0382138	0	0.0364315	0	0.0477578	0.0591558	0	0.113233	2.37459	2.30946	2.34341	1.10513	7.72187	7.85897	5.79636	4.76209	5.24073	5.33209	2.50177	4.5194	1.88385	1.8384	1.55422	1.90751	12.1718	8.90832
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073712 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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