XLOC_026741 (gene) - C. hemisphaerica

Overview
NameXLOC_026741
Unique NameXLOC_026741
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003834:2500..6055+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026741 ID=XLOC_026741|Name=XLOC_026741|organism=Clytia hemisphaerica|type=gene|length=3556bp|location=Sequence derived from alignment at sc0003834:2500..6055+ (Clytia hemisphaerica)
GCTTTCTGCAGTTTTCTATTTGGCTGAAAAGGTAGCCGCCATTTTATATC
TTCGAGCTgcaagaatatttcaagagcattgTCTTCAAATATCACAAGAA
GTGACAACAAGTTTTACATCAAATCTAAAGGGTATCAGGTAGGGAGTCAT
TATTCATGATTTAGAActttaattgaaaataaattcgaTAGTTTTAGCTG
CAAAACGACTAATCAAAGTTGGTGCTCAATGTTGTTGTGTTGTAGCTTCA
GTTGAATATCTCTTGGAgcttattcaaatattttttcttttctatcaaAC
GAAATCTAAACCTAGATTGAATGGATTGAATTTATCTTCTATCTATGGTA
CTGTAGATAGTTCATCCATGTTGTACAATTAGTttactttcttttgtttg
ggACACACACACCCAACAAGTGCACAAACAGTCCACCAGTttagggacca
ttcaaaaagtacgtacgctcttAGGGGAGGGTACTACCAAAAGCGTATGA
AAGcgtacgagggggagggggaggtcGGGTAGAAATGTACGTAcgctttg
acatttttcaatagAACGAAATTTCAGTCAAAGTTTGGTTAGATCTTCTG
ATTATATCATCAACAAAGACAAACAGAAGTTGaacttattttaatttttc
tcaaaatccccTAATTTACCTTTGCATAGACTCTTTAATACgatctaaaa
tttttttgaggggggggggtcatttcaAAAGCGTACGTACGTGAAAGGGG
GGTGCCAAAGCTTACGAGATCGTACAAGGGGGTGGTCAATTTTCACCCTT
TTTGAGCGcacatactttttgaatggtccatATGTGATTTCAGACACAAT
GAAATGACTGAAACTATTTTCATACTAGACTGGTTTGGTAACAATATTCC
CTTATCATTTTCCTTATCTATCCCTcacttttctcaaaaaaaatgtatca
taataGAATAGAGAAGTTTTCCTATGGCCTATGCTATCAGCATAGCATAA
CATTGTTTACATGAAAATAAGCTTTCACAGTTAAACAATTTGATTCCTTG
TAGTATTCCAcaaaaatcaattatttatcaAGTACATTCTCAGGCAATGT
CAACCGAACAATTGATTGGAAATGTTGGACACCGGAAGTGAggcgaaata
attttttttttttgaaaattaaacacTAAATTTaagataataaaatataa
ttccaaGTTTTATGTAATCAAATTAATCAAGAAAAAATGTAATACCTTTT
TATTAGATTCTATAGTTGAATTTAATCGTTCAATTGACTTCAATAAACTT
CAATTAACTTGACAATAGAATTATTTGNCTATTAGATTCTATAATTGAAT
TTAATCGTTCAATTGACTTCAATAAActtcaatacactcttctcgagatg
cataaatttattgttgtcctcgttttcaaacagatttcattgctataaaa
ttacatattcacaatgataattgtgttgtttacacctcatgagacatttt
gaatttcaagtacttttgttttagacttagcgtttgccttttgggaattt
aaattggtttaaatgtataatttcatagcaatgaaatctgtttgaaaacg
aggacaacaataaatttatgcatctcgagaagagtgtattaacTTGACAA
TATAATTATTTGGTTGACATCGCCTGGTAGTCGTAATCAATGAAATCGAT
GAGTAATCATTAGATGATAGATTGGTTCTGATTGTTTACATTATCAATTA
CAATCAATACCTAATCGATATAGATAATATAATTAAGGTAAATAACATTG
TGACTTAGTCTAAAACACACTGACTATCGATTATCATCGCTATAGATCGA
TTTGATgttattaatacaataatgaccggttagtgagggctgtactgaga
aatattgcccaaggtcaagtaacgaccaagcttgcgaggttgttgcgttg
accgagggcaatattttcagtacagcccggaagaaaccggtcattattgt
atttgttaaccgtttccttcagcttcaattgatttttagcgctttatcca
gaaaaaatagcgaaataaagcgaaagAACAAGCGAAAAGAGCTAAAATAT
TGTTataaattgacgtcagaaattaaaaatgagagaaatgatgtcaacgc
attgttatttttcctttgaaaaagtgaagtCACAATGAAAAGAAGCAATT
GCATTCCGCAAAAAGCTGTGTAGCCCGcatcgaaaaagtaaccggttaac
aacaATTAATAATCGATTTATAGTCAATCATATTGATAGGTATGTTAATC
AATAATATCGACTTAATTGACAAGTTTGAAAAACTtacaaaaattgaata
taaaatgataaaatgataattCATGTCTAACTGTATTGGGTTGGTATTTT
CAGTTTGGAcagattttaatgtttttttgtttttgtttcaggCTTTTTTT
ACTGATGGCTGACCCTGGAACAAGCTAGGAAGAGATGACCGACTGATTCT
ATAATTGAAGACGAGTTGTCTTTCTTCAAACGGTAATTGGTAGGTAACAT
TTCTCATATTTGCACCACTTTTTTAAAAggataaataaaaatagataaat
attataaatcaaaattataCTTTTTCTGTCTTGAAACAAGCCTATTTATA
GCAAGACAGTTAAATCAAAAAGCTAACCTTAATTAATTTCTTTTGTAGAA
ATTAGATATGGGATCATTAAGgtttcttttttgatattttttagggATGC
GAAATGAATGTTAAACTACAAATCTGAATTGGTTGATATCATCATNNNNN
NNNNNNNNNNNagaaataaaaaatgagagaaatgatgtcaacgcattgtt
atttttcctttgaaaaagtgacgtcacaatgaaaagaagcaattgcattg
cgcaaaaagctgTGTAGCCCGcatcgaaaaagtaaccggttaacaacaAT
TAATAATCGTTTTATAGTCAATCATATTGATAGGTATGGTAATCAATAAT
ATCGACTTAATTGACAAGTTTGAAAAACttacaaaaattgaatatgaaat
gataaaatgataattCATGTCTAACTGTATTGGGTTGCAATGGTGTATAG
GTTGGTATTTTCAGTTTGGAcagattttaatgtttttttgtttttgtttc
aggCTTTTTTTACTGATGGCTGACCCTGGAACAAGCTAGGAAGAGATGAC
CGACTGATTCTATAATTGAAGACGAGTTGTCTTTCTTCAAACGGTAATTG
GTAGGTAACATTTCTCGTATTTGCACCACTTTTTTAAAAggataaataaa
aatagataaatattataaatcaaaattataCTTTTTCTGTCTTGAAACAA
GCCTATTTATAGCAAGACAGTTAAATCAAAAAGCTAACCTTAATTAATTT
CTTTTGTAGAAATTAGATATGGGATCATTAAGgtttcttttttgatattt
tttagggATGCAAAATGAATGTTAAACTACAAAACTGAATTGGTTGATAA
TCATTGAAAGTTTAATCGATTCTAactgagaaaaagaaaatcatcttGCA
GAAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042989TCONS_00042989Clytia hemisphaericatranscript
TCONS_00042990TCONS_00042990Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003834supercontigsc0003834:2500..6055 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.37	0.89	0.71	0.67	1.4	1.45	0	0.92	0.55	0	0.16	0	0	0	0	0	0	0	0	1.16	0	1.86	0	0	0	0