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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012094 ID=TCONS_00012094|Name=TCONS_00012094|organism=Clytia hemisphaerica|type=transcript|length=811bp
ATCCTGAAAGTTGAAATATGATCCGGATAGGCACGTAGTTCCGGAAATTC
ATGGCAACATGGCCGACAAGTTGTACGAGAAATCCAGCTCAATTTTAGGC
ACTGTTTTGGCTAAAAAGGGATCAATTAAGAGCTTATGCTTTTCATCTGA
GTACAGAAATAAAAGGAAGCTTTATGCTTTAACTTTTGAAACGCTGAAGC
ATAAAAGAATCTTGGAGAAGATCATTAACTTGACTGCACTTTGGAAGGAA
AACAACCAGATAAGTAAAGCACTTCAATATGTGCTTTGCTATGAAACATT
ATTTGGTAAAGGACTTCATCAAAATAGTAAATATGAAAAGTTCATTTCAA
CACACGAGGACAAATTGAAAGCAACATTGGATGACCTACAGAAAGAAGAA
CCTGGTCTCTTCACAGATACAAAGAAAAACCAAGTTGTCCTTCCCAGATA
TGTGCGTGTCAATGTTCTGAAATGCTCCATGGACGTGGCTATCAATCGGT
TTCAAACAGATGGCTTCAACCTTGTCTCTGGAAAGGAAATTAATGAGATC
AGTGGCGATGAATTCGTGCTTGACAAGGACATTCCCAACGTTTTGGTTTT
CCCTCCAAACACCGATCTTCATCAATATTCTTTGTACAAGGAAGGAAAAC
TTTTTCTACAAGATAAGGCCAGTTGTCTGTCTGCTTACGTGTTGAATCCA
CCTGAAAGGAGCTTGGTGATCGACGGATGTGCAGCACCTGGTAACAAAAC
AACTCATTTGGCGTGCATCTTGAATAACAATGGGTCTGTGTATTCATTTG
ATTTGGACAAG Run BLAST on NCBI transcript from alignment at sc0000137:287011..303310+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012094 ID=TCONS_00012094|Name=TCONS_00012094|organism=Clytia hemisphaerica|type=transcript|length=16300bp|location=Sequence derived from alignment at sc0000137:287011..303310+ (Clytia hemisphaerica)
ATCCTGAAAGTTGAAATATGATCCGGATAGGCACGTGGTTCCGGAAATTC
ATGGCAACATGGCCGNAATATGATCCGGATAGGCACGTAGTTCCGGAAAT
TCATGGCAACATGGCCGACAAGTTGTACGAGAAATCCAGCTCAATTTTAG
GCACTGTTTTGGCTAAAAAGGGATCAATTAAGAGCTTATGCTTTTCATCT
GAGTACAGAAATAAAAGGAAGCTTTATGCTTTAACTTTTGAAACGCTGAA
GCGTGAGTATATTTTTGATGTATtgaagattttacaaaaactttgatttt
atgttaaaatttttcattttcttttaaataaaataggTGTGTCCCTAATT
TCCTTCAGGTAAATAAATATATGTTTGAATTGAGATTGGTTGAATACACT
TGTATTGCAAAAATTTAGCCTGTTTGATAGTTTAACGATCTGTGGTATGG
CCCAGACTTTACGGGCCATTTGCCACTTTTGAACTTTAAAATAACTCCCA
CCACACTCGAAAACACTGGCCTGTGCATGTCAGGGCATGCTTCATTATCC
GTAGTAGCataggtgccaactctcacgcattgggccattccaaaatttgt
ctgtaacaggggggcggacgacacaggatttccgagggcaaaagttttca
ccaaaattcgaaatttccaaggcgagagaagaaaatgtatgaatttccaa
ggcaatcgaatcaaaaaaggcaaaaaaaagtggaatttccgatgcattta
gcaaaagtacatggatttttatcggaatttccagccaccactggaaaaga
aaaattatttctgaggcaagaaaaaattaaaaaatgcacgtcgtccgacg
gggggtaacaaaaattttctggaatggcccattggaCGTGAGACTCTCGC
ATTCCAACACTGTCTCACGCATTTTTTGAGCTATTTGagcgactgaaaat
cttttgtggcggtcatgatgtccgaatgaaaaaaggaataaaccattaac
ttgagagttgaaaataaatctcttacacccctgtttcttacttagcctat
tcttttaatactcgcttcctttgtagctttcagggtgtttttaagttaac
ttttatcgactcgctttcttcgtaactttcaagagtgtttctaagatcac
ttttatcaattcgctttcttcgtaactttcattCAAGGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNttttttcataactttcaagagtgtttctaag
ttaacttttatcaactcgctttcttcttaacttttaagagtgtttctaag
ttaatttttatcaacttgctttttttcaaaagtttgatttctcacgcatt
tttgatatttgaaagaaatttccccgattttccgatttttggaaaaaaaa
ttccccgattttccgattttcggaataaatttccccgattttccgatttt
tggagaaaaaaaattccctgattttccgattttcggaataaatttcccca
attttccaattttttggaaaaaatttcctGTTTTCCGAAGtcggaaaatc
ggaaaaatcggGCTAAGATTTCGgattttccttcgaaatttttatctcac
gccAAATGAACATCTTAAGTTGGCAGGTCTGAGTAGGGCGTTTGTAACTT
TTTTGACCCAAAACCGTACGAAACGGTTGAGGGGTAGTGGGCTCATTTTG
TAGGATTTAATGAATTTCTCTCCAGTTTCTTTTTACCCCCTAATGGGTGT
GACTTACATGCAAAATTTTAACGAAAAGAAAAGGTGTTTCGTACGGCAAA
AATCTGACCAGTTTTGACACtgtcagtatagacttaaaaaCTCGTATACC
AATCCAAATTGATTATCAATTAAAATCGAAAGCTAATCGATAATTAATCG
ATTGAATAAATATCAGTTAAAAACGATAATcgataccgtgagattgggta
acttgcatcagtggaggctaacatgcatagccctcaaatgaaagacctgg
gtggtcattaaaatacaaaattaaatcaaaacaaaaatggtagagtagag
ctgcgagcggagctgcgtagttgtattttaatgatcagccaggtctttca
tttgagggctatgcatgttagcctccactgatgcaagttacccaatctca
cggtagctAATCGAGggttattttaaaaagcatgGTACCCCAATTGGTGC
ACCAATTGGGGTACTTATTGGGGTACCACTTTCTGCCCTTAATTTTGTTA
AATGACACTTAATTTCATTACAGTATAATATGGTGCTAAAACCGTTCATT
GATGGTTTGATAAAGTTAGATTTAAGATTATCACAAAACTTTTGTCACAG
TTGCCTCATTCGGCGTGCTGTAGAGATTCAtagtatgaaccccccccctt
tattaaggggggatccgagttttcaaggaaggctttataggggggatggg
caattttccagttaaaatggggggtttgagcttatagGGGGGATCAAATA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgatcaaaaaattttaaaaatag
gggggatacccctctgcacactatgagaTTTTTAATCAATAATATCAATT
ACAGTGttaataattgataaaatcgattaatattgatataattgatatct
caaccctatcgatttttaatcgataatatcTAATTGATATAATCGATATC
TTACATCtgatcgatataatcgatactcacaattttttaggcgcctatta
tttattgattatcgtttttaattgatatttaatcaatcgattaattatcg
ataagctatcgattttaatcgataatcgattttatcaaaaaaatctttag
cATAATTAGGATTTAAAGACAGTGCTTAGAAATGGTGCTTTAAATAACCC
CACCcctaatttttgaattttttaaaaccaTTTCCAGCCAGaatattcaa
atctttttcaaattacaagaattttttaccttttgagTGAGTGGACTTAT
AATTTTGGGATCCTTTTAGTGACTCTATTGCTAATTTATGACTTATGAGT
GATATTATTATCACTCTTGTATATTACATTCATTACATTCATTCTGCTAT
TTCTAAGAAAAATGTCTGATGGAAAACGGTGTATCAGTGTAATATGATTT
TTGCTTCGAAGATTACCTGAAAACTGGGAAAATTGGGAAATCTGATAGTG
TAACCCAATCCCATTTGGGGATTAATATaggaaattagaaaaaaatttac
atttagAAATGTGGGAGAagaaaaacgaggaaaaaattctgaaaaagcaA
TAGATTTTGAGGGGAAAGTCTGTGAAGAAGTCCAGAgttcaaaatatgta
aaattttaaaattctcttCAGATAAAAGAATCTTGGAGAAGATCATTAAC
TTGACTGCACTTTGGAAGGAAAACAACCAGgtatttaaatttcaaataat
aaagattttttttatttcttatctAATGAGAAGAAGTGAAATTAAATATC
GTCTAAAAGGAATTGTAGGTTAAATTTGTTACTTTATATTTTATCATCAG
AAATGTGGCGTAAATGGAAAAAGAATTTGTTTCTTGTAATGTTTCTATTC
ATGGGAATTGCACTGACAATCAAGTTACTTACAACAGATTTGAGGTCAGA
AGAAGAAGAATCAAATGTTGTTTATAACTCCGTTCCGTTTGAGGGTACTG
TCAATGTTTGGGGGAAAGCCTCAATTGCTGAATATTTTTGGAGCCATCTT
TTTGAAGGAGAGTTGAACAGTGTAAAAGGATACATGATGCAACGTGGACG
ATTAAAGATTGATAGAGTATTATTGAGTTTCAAAACTGGACCTTATTTGC
TTCCATCCACTGCTGatcaaaaagttgagaatttGGTTATTATTTTAAAT
GGACGAGAAGAGAGCAAAGTTGCAAAAGCAAAACAATGGCTTGATATGTT
AttggatgttgaaaattttcctagaTTAAAAAATCTTGGTATTATTATTC
TTGGAAATGAGAGGTGTGGAAACGAGTGGATGAATAAGTatattaaaagt
aaaattttgaagtttgttttcatCATTTATGATGTTGTGAAAGAAACTAA
GAAGATCTTACAATGGCCACTTGGTGTAGCTACTTATAGAAATTTTCCTG
TtatcaataaaaatgaaattgacgTATTCAAGAAAAGGCATTATACTTGT
AACTTTCTAGGAACTGTATACCCAGGCTCTTCAAGGGTTCTTCTGAAAAG
TTTGCTGGAGAAACGTGACTTCAATTGTTACTCTAAGACAAGATTTGAGT
GGATgcctaaagaaaataaagacagTATGGAATTATATCATAAGATTCTA
AGAGAAAGTGATTTAACATTATGTCCAGTCGGCATAAATTCAGAATCTTA
TCGCATCTACGAGAGTATGTCATATGGCAGTGTACCAGTGCTGGAGGATG
TGGTGACTCCTGGGAGTTGTGATAAGAAAACAGGTCCATATTATATGTTG
AAGAAATACAAAGCTCCTgttatttatataaaaaactgGAATGAGCTAAG
TGACATCATACAGAAGGAAAGCACAATGACTTTTAAAGATATCGTTTCCC
GTAGGAAAAAGATATTAGAATGGTATGAAGTATTCAAATATAAACTGAAA
GAAGAATTCTTAAGTATTATTTCAGAACGATTTGAGATTTCTTAGTAATT
TCACGTACTGTATTATATTACATTTTTAgcataattttttatgaaaatat
ttttacaggaTGGATTAcaagttttatttattatttcaaaGAATCGTTGT
ATCATTTTATCTGCTACTGCTGCTCAATAAAAAAGCTGGACACTTTaaag
gaataaaaaaaatacttatATAGGTTACAAGTAACCCTTTTTGCATTACA
AAACCTCTTTAAGTTTTTTTAGCATCTGTCACAAGGGTTTTaatcacaat
tttttttgtctatttggAAACCTCCTATATTTTTAAATCCAATATTTCCT
CTTTTTTCTCTTTAGATAAGTAAAGCACTTCAATATGTGCTTTGCTATGA
AACATTATTTGGTAAAGGACTTCATCAAAATAGTAAATATGAAAAGTTCA
TTTCAACACACGAGGACAAATTGAAAGCAACATTGGATGACCTACAGAAA
GAAGAACCTGGTCTCTTCACAGATACAAAGAAAAACCAAGGTATAATTAC
AActttaaaaacattataataatgttttcttttaaaaaaataccatacta
aatacatttttgttttcccTGTAAATTTCAGCGTACATTTTCTTTCCAGA
ATACAGTGTACATTTTCCCTCTAAAATATGGagtaaatttgttttaaaaa
acactgcaaacattttcctttggaaatacgaataacatttcccttcaaaa
taCAGAGTAAATTTACTTAAGATCACTGTATGCATTTTCTTCTAGAAATA
CGTAttacagggctgcaaataagcgtcggtcatcggtcaatgtccgactg
aaaaagctatttgagcgactgaaaatcttttgtggcggtcatgatgtccg
aatgaaaaaaggaataaaccattaacttgagagttgaaaataaatctctt
acacccctgtttcttacttagcctattcttttaatactcgcttcctttgt
agctttcagggtgtttttaagttaacttttatcgactcgctttcttcgta
actttcaagagtgtttctaagatcacttttatcaattcgctttcttcgta
actttcattCAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttt
tcataactttcaagagtgtttctaagttaacttttatcaactcgctttct
tcttaacttttaagagtgtttctaagttaatttttatcaacttgcttttt
TCGTAACTTCCAaaggtgtttctaagatcacttttatcgaatcaatttct
ctgttatctacagtaacaaactgtttaaaggtaacttttatttttcctac
tcgctttctccgtaactttaaaaaaaaatatacactgaatgaccgacagg
attttgagtttgaccgacaggatttcatttctgtcagacatgatgtccga
ttgactaaaaatatttatttgcagccctggtattatattttcctttttaa
aacactgcatattttcctttggaaatagaGAGAACATTTCCCTACTAAAT
ACAGAGTAAATTTACTTAAGAACAGTGcatgtatttttattttagaaata
cGTATTACATTTTCCTCTCAAGTAAAGTTTATTTGTTTTAAAACACTGCA
tgcattttccttgaaaaatacgtaTTACATTTTCCTCTCAAATAAAGAGT
TTATTCGCTTTAGAACACTGCATGcattttcctttggaaatacggataac
atttcccttcaaaataCAGAGTAACTTTACTTATAAACACTGCATGTATT
TTCCTTTAGAAATGCGGATTACATTTTCCTCTCAAATAAAGAGTTTAGTT
ACTTAAGAACACTGCATGTATTTTCTTTTAGAAATACGTATTACATTTTC
CTCTTTAAAATACTGCATAcattttcctttggaaatacagATAAGATTTC
CCTACAAATTACAGAGTAATTTTGCTTTAGAACACTGTATGcattttcct
ttggaaatacagATAACATTTCCCTAAAATACATAGTAAATTCGCTTTAG
AACACTGCATGTTTTTTCCTTTAGAAATACTGAGATTATTTTCCTTTCAA
ATAcagattttatttgctttagaACACTACATGCATTTTCCTTTAGAAAT
ACGGATTACATTTTCCCCTGAAATAAAGAGTTTCTTTGCTTAAAAACACT
GCATgtattttccttgagaaatactgATAACATTTTCTTTTCGAATACAG
AGTTTATTTGCTTTAGAACACTACATGCATTTTCCTTTCGAAATAAGGAT
TACATATTCCTCTGAAATAAAGAGTTTCTTTGCTTAAAAACACTGCATgt
attttccttgagaaatactgataacattttcttttcaaatacaGAGTTTA
TTTGCTTTAGAACACTATANTTAAAAACACTGCATgtattttccttgaga
aatactgataacattttcttttcaaatacaGAGTTCATTTGCTTTAGAAC
ACTATATGCATTTTCCTTTAGAAATAAGGATTACTTTTTCCCCTCAAATA
AAGAGTTTATTTGCTTTAAAACACTGCATGcattttcctttggaaatacg
gATCTTCATAAGTACAGAGTAAGTATGCTATAAAATACTGCATACTTTTC
CTTTGGGAATAGGGATGACATTTTCCTTTCAAATACAGAGTTTAATTGCT
TTGAAACACTACATGCATTTTAGAAATACTGagaatattttccttttaaa
tACAGAGTTTACTTGCTTTAAAATACTGcatatatttttctttggaaata
TGTATTACATTTTCCTTTAGAATACAGAGTAAACGTGCTTTAAAACACTA
CATGCATTTTCctttttgaaatatgaattACATTGTGCTTTCAAATACAG
AGTAAATTTGCTTTTAAACACTGTATGCATTTTTCTGTATGTATTATTCA
CTTCTATTTCGTTCCCTATATTGCAACTTCTGCATTTTTTTCACACCTTC
TACCTGCCTTCATGATTGACCtcctttcaatattttgattctGACTGGTC
TTTGTGGAATTTTCCGTTTAATTCTcgtattttatatattttcccaGATT
TATTGTGAGTTCACCAtcttcaaaaataattgaagaGTGCCTTAAAATAC
AGAGTACAATTTTCTTTGGAAACATAGGGCTTTAAAAATACACTTTCGCC
AAGTTAAAATTAGACACCACCTTAAAATAACAGTAATTACTTTATGTAGT
AACTGCTTTCACCAAACTAGATAGTGATACCACCCCTCAAGTGCAGTTAC
TACGTATCTGTAGTAACTGTTATTTTTTTAATGTGAAAATCTAGACCACC
ACCGTAATAAGTGTCATAGTGTCATATAGTAACTGGACCCCCCCACTGAA
NTTTTTAAATGTGAAAATCTAGACCACCACCGTAATAAGTGTCATAGTGT
CATATAGTAACTGGACCCCCCCCCTGAATGCATTTACTTTCAAACCTGTT
CAAATTACAGCATATATTCTCCTTTTCAGATAAAGGAATTCATTTTCCCT
TTAAAATACACAGTAAATTtacaaattaatttgaaaatatggTATACAGT
TTGACATTGAAAACTctgaaattttcctttaaatATATGAAATACATTTT
CCTTTCAAGAAATTGAGTATGTTTTCCTTCGAGAATATGGAGTATGTTCA
TTTTCCTTAGGAAATACAGAGTACAATGTTCTTTGAACTACCTTATACTT
TTTAGTAGTTTTGTCTACTTTCAGAGTGtatacaaagccttaaaatattt
taaaatttttggcttAGAAACCTTATATTCTAATATACTTTGTGCTTTGC
ATATAATAAATGTGTATTTACAATCTATTTTGTCTGACAGAACCAacatt
ttgacatattttgaaatGCTAAAACTGACCTTTTGACAATCAttttatgt
ttaaaatattttaaatttaacCCAGAGAATACCTTGAAAGGGTGCCTTAA
GCATTAATAAATATTGAGTAAATTTTCCTTTTAGAGTGCGAAGTATATTT
TCCTTTGAGAATACAAAgtatattttcctttaaaattcaTCCTGCCTTTG
AGATTTACAGAATATAAGAAAGGTATTAAAAGATTTCCTGGATTgggaaa
ttgtttttatttgaaaatatgaaattcattttgctttgaaaatacaGCAA
ATATTGAACGGTACTGAAAATTTCCTGGACACGGGTAAAGACAGGATACA
GAATTTTATATAAATACAACGAGGATTGCATTGAAACCTATTTAGGTGAA
ACTGAGAGGAGAATGCATCATCAACCATAGTGGTAGAGATAAAAATTCGA
CTGTATTGAAACACTCTCAACTTTCTGGTCATACACCAGTTACCATGGAT
GACGTAGAACTAATTCCTAAGGGATTCAAAAAGAATGAAACAAGAGAGAT
AACTGAAGCTCTTTTAATTATCGATCAGAAACCTACACTTAATGTACAGA
AtttgtttaaaacaatacaGCTTTTTAcgacataaattttttttctactt
ttattgCCTTTTTTGTATAATTACTTTTGTATACTTTCTTTGCACgtttc
aattattttagttCCTGAGGTATCTTCTCTATCATTTTATAGCGTGtttt
tgattgtatttttagaACTATTATactggtcatttttgaaaatttgtttt
taaaagatttcgtTTGTTATTAGATTTTTTACTCTGAAAATGACCTCTTG
TAGtaacaacatcaaaaacatgaagcttctggttattttttttatcatta
aattAGTTGCCCaaggaaacatttttcaaaatacaatGCTGATTTTGCTC
ACAAACGAAACAACTTTCACCATACTCCATTTTTGAACAAGTCTTTCTTA
TAATGGCTTTTTTAATCTTTATGGTTATaacacaaaaaatttaaattcct
cgtgtaagaaaaatctttattttagtAGAAGGGAGTGAAAATTTGATGGA
TAGTGTGCAATTGTTCAATTTTAGGGTATGATATCTCAagaaaaatgcaa
tatttgaaACAGATAATAAAAGATACATCTTCCTTTTATTATAAtggaat
aaaaatttctaattaaaACCAAAGAATAGTAGTAGTAGCAAAATCAATCT
TCTAAAGATCgcagaaaagtttttttggttCGTAGGGcatttatttcttt
tgtaaaatattttctttgaaaaatacagGATAGCTTTTCTTCAGGCAATA
CGGGCATAATCTTCTTCTAGTATACAGTATgtgggcccccaaaacggcga
tcaaatttaaaatttctctcaaagctagaggaaaagaggttttacaaaaa
tttttcttgcatgcaaaactttaacctctctactttatttccggacaatt
ctttttcaaaattttcaatttcaacaatatttttcaatcgcttaaagata
ggtaacttttttctaatggcccccaaaacggaggtttgcaattttagcga
tttctcgagatatctttaagatattaatacaaaattttgagcatagtttt
gaaatgtgatttagagggttttgcgcataaatttgtttgacaaaattttt
acagtatacccctggttgtcaaaatgcaggtttggggcccccaaaacgga
ggtgtagttaaaatcaaattattaagcccagtggtaataggaggaaaaac
tatgaacacatttgtgtttacccttaaatttacgacccgatagatgtaaa
atttatgatttttattaaatatttcaagattttcgatattgcaaagtcca
aactgaaaatttagaaattttcaaaatgaaaacttagatttaacaacgtc
ttaatcaagtttctgaaaatcaatgtcttttgaaaatagttccattcatg
tatggaaaaagctgtgaaaatttgagaagaaaagcttaactgaaactgaa
aatgttaagctttaaaggtatttttctcctatattttgcaaaaaagtgac
agaatttgccatttttgctgattcagcgaaaagttttatatataatgtta
attttttgtaataagctattaactcaagctgataggaatgaaattccaag
attttttgctgtttctcatatttagaattttcggttattaatatgctgat
tctagggtcccaaaatactggttgacctttaagatgctatatcttttacc
catcatctaaagtcacagatgtatctgcattttctgaacggcattagNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgc
aaatatgttattttgaatctgtctcaaaccatcaaaaacatgcccatttt
taagtataaccatcattctttctaaataaacaaaaatcgtttaattctga
taaatctagaagtcagaatcctcattttaatgacaacctccgttttgggg
gccgtctccgttttgggggccatatactgtagtatAGAATAAATTTCCCT
AAATGAATGATATGCTATTTTATAATATACACAAAGGACTTCTTTCTTTT
ATGTTTCCTATATTATTCATAGTAGGATCTCcttaaaaattacagaaaaa
aagttttcctctGAAAATACAGAGTAAATTTTCTGTAGTAGATCTGGATA
ATATTTTCCAAAGTAAatataaaattcttttttttctcttttagagaaaa
taaatattttcggTAGCAGAGAATATATTTAATGATAAATCAAAATAATT
ACTATTTTCATCAGGACATTGAAAAGACAATCCCGTTTTGAAATGGAAAt
gtattttccttaaaaataaaaaacatgctGGAAGCAAAGGCGAAAATCTG
GCCTATGAATCGGGAATCGTTCATTAACACATCTAAACCCtgtaattttt
taatatttttcctttCTATAGTTGTCCTTCCCAGATATGTGCGTGTCAAT
GTTCTGAAATGCTCCATGGACGTGGCTATCAATCGGTTTCAAACAGATGG
CTTCAACCTTGTCTCTGGAAAGGTATACAAAGTAATGACCTATAATGGAC
TCGGGCTATTTTAACTTCTTTTATTAGATTCTTTCTATGATCTAAAGTAA
TTCTGCCATCGCACATTGTGAACAAAgctctttctataattcaattCAAA
TCTCTGTGATTTACACAAATCAAGTTACTCTTTCAGTAGATGTAGAAATT
GACAGCACTAATTGCAAAATAGGCTTAGTTCGTTTTTTCTTGTCTTAATG
ATATCTTGATATATTTATTGAGCactctttgaatatgatttcacCTCGTT
TGATTGTAATATCTGGATATATTGATTATAACTGATTGTAACCAGGCTTG
GGTCTGTCAACAGATTTTCTAACATTTTATAAACTTTGTAGGAAATTAAT
GAGATCAGTGGCGATGAATTCGTGCTTGACAAGGACATTCCCAACGTTTT
GGTTTTCCCTCCAAACACCGATCTTCATCAATATTCTTTGTACAAGGAAG
GAAAACTTTTTCTACAAGATAAGGTAAGTGCATCGAAATAGACTTATATT
GAGATGAGGATGGTTTATAATTGAGTGGTGTAGGCACATGCTTAAATTCT
AAGAGACGAACAACAACCAACCTTATTATAGGCATAGTGGgcaacacccc
tccaacccccacctgaaaaaggtcacccccacctacatagggttaccccc
acctgaaatctcATATCAGCCCAACTCCCACCTTTTTCAGCAAAACGGCG
CAATCGAATCACACCTTCGAATTTGGAGGCCTTGTTCCTTTTAGGAACAC
TAAAGATCCCAGTTAAAAGTCCTGAGGACTACAAACTGGAAAGGAAAAGA
CAGGAGAAAAAATGAACTCTTTTTAACCTTCAGAACttacatagtgtcct
cccccctggattcagggggggaatgggttttgaggtcaaaaggacgcata
ggggggaaagaattttttttgaagccagggtgGGGGAAAACgagggggga
atggaaaattttcattctaggcacgggggggaactcaccaaaatcaattc
aaaattgaaaaacatctggttttatgagatgatatagcataatgcttagt
tttattaatattatggtTTAAAAACAACCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNcccccacctacatagggttacccccacctgaaatttctcatcaaccc
aacccccacgtatttttaaatctgaaaatcctcaaccccccccccagaat
CCAGGGGGGTGCCCACTATGATAGGTTCATATCATATATGCATACATCAT
ATATGCTCAGTCAATTATGAAAAGTTCTTCCTTGGGATGTGGATATGGTT
ATAACCACTTGTGTTGTGAAGAATTAGGGAAGTTCTTGGAAAACTAAAGA
TTGCTTCTCACAAGAATTTTATAGCACCTAGGAAAGTTGTTTATAATTGT
GTGTATCAGAATTGCACAGACGCAGTAGTGTATAATTAATTATGATCTTG
CCTGACTTCCAGGAGGTTGGGGTTCTATTCCTGCTTTATTCAGTTGGCAA
GTGGTGTGCTACAATCAGTgcaataatatattggcacAAGCCACAAAAAA
ACACTGGATTTACTCACTTCCCTCTCCTAAATCCCCTCTCCCTAATTTTA
ATGGTTGAAGAAGGCAACAGGGCTGCAAACTCAACTATTGATGCTTGGGG
GAAGGGGAAATAAGTTGtaacatcaaaaataaaatgtttactGCCAAATA
TTATTGCAGTGATAGTAGTTATGTAATGGATTGCACAATACATAATGAGG
TGTGAGTGTGCTGGCCTTGTTCCCTAGTGGTTCATAGTATAAACCTTTGC
AATATAATCAGTCAAGGCAATGCATATGATTTTAGACGAGattgagtttt
tataagatactttattaattggtcatttgaagtaataaaaatgatgcgta
ctttagaaaaagtaacgaaattgttttattactggttaacgaccaatcaa
atcaaataagagcttgtaaaaactccagttTGTCCCAACTTTTTATCATT
CCAGGCCAGTTGTCTGTCTGCTTACGTGTTGAATCCACCTGAAAGGAGCT
TGGTGATCGACGGATGTGCAGCACCTGGTAACAAAACAACTCATTTGGCG
TGCATCTTGAATAACAATGGGTAACTCTAATTCTAAGAAAATATCTACAG
CTGGGCATTTGATATGTCATATCAAAACACTTTGAATAATCAAAATGCAT
AccagtttttcagaattttttcaaTACCATTGGGAAATATATTTCCCACC
TCGTCATATGAACGTTTTTGTGGAAAAGAACTGTTACCTTTCACATATTT
CAATCCAACTCTTTTTAAGAGCAGATCTCAGTCCCCAGCAACTGCATATC
TGATTTCACTTCTTCCTCAATCTATACATTTTGTAGGTCTGTGTATTCAT
TTGATTTGGGCAATTCTCTCTAGCAACTGCAATACTGATTTCATCAGATT
TCATTTACCTAATTTTCTGCATTTTGTAGGTCTATGTATTCATTTGATTT
GGGCAAGTCTCTTTAGCAACTGCAATACTGATTTCATCAGATTTCATTTA
CCTAATTTTCTGCATTTTGTAGGTCTGTGTATTCATTTGATTTGGACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012094-exon-sc0000137-1491911889:287011..287040 | TCONS_00012094-exon-sc0000137-1491911889:287011..287040 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:287011..287040 | TCONS_00012094-exon-sc0000137-1510915933:287011..287040 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:287011..287040 | TCONS_00012094-exon-sc0000137-1575043694:287011..287040 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1491911889:287093..287262 | TCONS_00012094-exon-sc0000137-1491911889:287093..287262 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:287093..287262 | TCONS_00012094-exon-sc0000137-1510915933:287093..287262 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:287093..287262 | TCONS_00012094-exon-sc0000137-1575043694:287093..287262 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1491911889:291332..291390 | TCONS_00012094-exon-sc0000137-1491911889:291332..291390 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:291332..291390 | TCONS_00012094-exon-sc0000137-1510915933:291332..291390 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:291332..291390 | TCONS_00012094-exon-sc0000137-1575043694:291332..291390 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1491911889:292976..293150 | TCONS_00012094-exon-sc0000137-1491911889:292976..293150 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:292976..293150 | TCONS_00012094-exon-sc0000137-1510915933:292976..293150 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:292976..293150 | TCONS_00012094-exon-sc0000137-1575043694:292976..293150 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1491911889:300132..300232 | TCONS_00012094-exon-sc0000137-1491911889:300132..300232 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:300132..300232 | TCONS_00012094-exon-sc0000137-1510915933:300132..300232 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:300132..300232 | TCONS_00012094-exon-sc0000137-1575043694:300132..300232 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1491911889:300602..300733 | TCONS_00012094-exon-sc0000137-1491911889:300602..300733 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:300602..300733 | TCONS_00012094-exon-sc0000137-1510915933:300602..300733 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:300602..300733 | TCONS_00012094-exon-sc0000137-1575043694:300602..300733 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1491911889:302715..302830 | TCONS_00012094-exon-sc0000137-1491911889:302715..302830 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:302715..302830 | TCONS_00012094-exon-sc0000137-1510915933:302715..302830 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:302715..302830 | TCONS_00012094-exon-sc0000137-1575043694:302715..302830 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1491911889:303283..303310 | TCONS_00012094-exon-sc0000137-1491911889:303283..303310 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1510915933:303283..303310 | TCONS_00012094-exon-sc0000137-1510915933:303283..303310 | Clytia hemisphaerica | exon |
| TCONS_00012094-exon-sc0000137-1575043694:303283..303310 | TCONS_00012094-exon-sc0000137-1575043694:303283..303310 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000137 | supercontig | sc0000137:287011..303310 + |
Blast
BLAST of TCONS_00012094 vs. Swiss-Prot (Human)
Match: NSUN5 (Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Homo sapiens GN=NSUN5 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 1.250e-50 Identity = 98/245 (40.00%), Postives = 145/245 (59.18%), Query Frame = 2
Query: 110 AKKGSIKSLCFSSEYRNKRKLYALTFETLKHKRILEKIINLTALWKENNQISKALQYVLCYETLFGKGLHQNSK-YEKFISTHEDKLKATLDDLQ------KEEPGLFTDTKKNQVV-LPRYVRVNVLKCSMDVAINRFQTDGFN----LVSGKEINEISGDEFVLDKDIPNVLVFPPNTDLHQYSLYKEGKLFLQDKASCLSAYVLNPPERSLVIDGCAAPGNKTTHLACILNNNGSVYSFDLD 808
+++GSIK L +SS ++N ++LYAL ET ++ +L+ +I L + ++ L VL YE L GKG ++ + H+ +LKA L L+ + E L ++ LPR+VRVN LK D ++ F+ GF+ S ++ + G F+LD +P +LVFP TDLH++ LY+ G L LQD+ASCL A +L+PP S VID CAAPGNKT+HLA +L N G +++FDLD
Sbjct: 16 SRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLD 260
The following BLAST results are available for this feature:
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