XLOC_005624 (gene) - C. hemisphaerica

Overview
NameXLOC_005624
Unique NameXLOC_005624
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000101:557565..561081-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005624 ID=XLOC_005624|Name=XLOC_005624|organism=Clytia hemisphaerica|type=gene|length=3517bp|location=Sequence derived from alignment at sc0000101:557565..561081- (Clytia hemisphaerica)
TGTATTTTGTTAGTGAACATAAAGAAATACAAAGATGTAATAAATATAAT
ATAATAATAACAATAAAGACTAATCACAAACGAGAGGAGAGAAGGTTTCA
AAAAAAATTATAATGTCAGCATATATGGAATCTTCGCCACTGCCTTCTGA
TTGATTCAACCGCAGGGAATGCTTATCCACCAGCAAGCTTTTGGATCGTT
TGAATTTTTCTCTAAGAATAGACGATATCATCAGCTTCTTTCTCTTCAAA
CATGTCTTCACCACCAGAGTCTAGGAATACACAAATCATAATATGCTTTT
ATTACTGTCTAGCATGTTAGGTCAGAGTAGTGAGTGAGGTATAGATAACC
TGAGAGCAGATCGTTATTGTTTTCCGCATACCACGTTAAAGCTCTAAAGA
TTCAAGATTCAAGCTTCGCTTCACCATAATCCATATAAAAAACCCGGTCT
GGAAGCCTTTTGTTTCTTTCCATTGTTTCTTACTTGAGCTTGCGTTTCGG
ATATTAGTTTGTTTTGCTCGCTTTTTGATCATGTGATTAAATCTTAAACC
AATCCCAAGAGGAATACTTGGTAACGATCAAAAACTGAGCAATTCGACTT
TGATCTTTTGATATTAACAAAGGAAAAAGCCGAGGGGTAAATCACTTGAA
AAAAGGTGTACGATACTTTTTGACTTTTTGAATTTCCATTTGACTTTTTG
ACTTTTTTTTGACTTTTAGTTGACTTTTTGACTTTTTTTTGACTTTTTTC
AAACTTTCATTTTGACTTTTGCCGACAAAAACGCCAACCGCCTTCGGGCG
CCCAACATTTTCCGCCCAAATCTGTCCAAAAACGCCAACCGCCCATAAAT
TTTGCTTCACCCATCTGCCCATTCAAGAAACTTTTTGACTTTTTTAAGAC
TTTTTTTTGACTTTTTGACTTTTTTTCTAAGAATTTTTGACTTTTTCTTT
GACTTTTTGACTTTATTTTTGACTTTTTGACTTTTTCTTTGACTTTTTGA
CTTTTTTTTTGACTTTTTTAACTTTTTTTTTGACTTTTTCTAGAGGTGTA
CGATAATTTTTCGAGTGATTTACCCCTCGGAAAAAGCTATCAAAAAGTTA
AAACAATAAGCTTCCAGACCAGTGTTTTTTATAAGGACTAGGGCTTCACG
TAGTCAGTTAAGTCATTTTGATGATATCTAAAGATATATAAAAAGCTGCT
TGCTGATCTAGCGAAAGCAATACAATAGACCTTTTCATAAATTACGTCAC
AAACATCACTTGCCTCATATTCAAACAATTACCATGGTGATTATGTCCCT
TGAGACAATAAGTGATTTTTTTATGAATAGAAAGTAGTTTTGATAAAATC
CGCTGGGAGTTAATCACCATTGCAATAATTTTGAAACAAGGCAACTGTTG
TTCGTAACATAATTTATGAAAAGATTTATTATCAACTTACAGTATGTGGC
CCCCAAAACGGCGATAAGATTTAAAAATTTTTCTTGCCTGCAAAACTTTA
ACATCTCTACTTTATTTCCCGACAGTTCTTTTTCAAAATTTTCAATTTCA
ACAATATTTTTCAATTGCTTAAAGATAGGTAGCTTTTTTTTGATGGCCTC
CAAAACGGAGGTTTGCAATTTTAGCGATTTCTCGAGATATCTTTAAGATA
ATAATACAAAATTTTGACCATAGTTTTGAAATGTGATTTAGAGGGTTTTG
GGCATAAATTTGTTTGATAAACTTTTTACAGTATACCCCTGGTTGTCAAA
ATGCAGGTTTGGGGCCCCCAATNCTTTTTTTCTAAGAATTTTTGACTTTT
TCTTTGACTTTTTGACTTTATTTTTGACTTTTTGACTTTTTCTTTGACTT
TTTGACTTTTTTTTTGACTTTTTTAACTTTTTTTTTGACTTTTTCTAGAG
GTGTACGATAATTTTTCGAGTGATTTACCCCTCGGAAAAAGCTATCAAAA
AGTTAAAACAATAAGCTTCCAGACCAGTGTTTTTTATAAGGACTAGGGCT
TCACGTAGTCAGTTAAGTCATTTTGATGATATCTAAAGATATATAAAAAG
CTGCTTGCTGATCTAGCGAAAGCAATACAATAGACCTTTTCATAAATTAC
GTCACAAACATCACTTGCCTCATATTCAAACAATTACCATGGTGATTATG
TCCCTTGAGACAATAAGTGATTTTTTTATGAATAGAAAGTAGTTTTGATA
AAATCCGCTGGGAGTTAATCACCATTGCAATAATTTTGAAACAAGGCAAC
TGTTGTTCGTAACATAATTTATGAAAAGATTTATTATCAACTTACAGTAT
GTGGCCCCCAAAACGGCGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGT
AAAAGTTTCAGCTGAATTTAAAAAACTGGGCAGGATATAATTAAAATCTT
AAGAATTTTAACCTTACCTACTTCAAAGAAGTTAAAGTCACCCATAGCTT
TTAAATTTTGAAAAAATAATTTCGATACTATGTTCCCAATAATTGAACTA
AAAAAGTGTCTTGGGATTTTTTTTGGAATTGACATTAACTCTTTAAATCC
TAAATTCTGTAAAAATATCGATAAAAAAGTAAATTTAAATGTGTGTTTTT
CAGTTATCTGTAAATTGAGGAAAAACAACTCAGTTAGAAATAAAATCCTA
AGACACTTTTTAAGTTTGATCTTTTGGGAATCTCACNAAATAAACAAAAA
TCGTTTAATTCTGATAAATCTACAAGTCGCAATCCTCATTTTAATGACAA
CCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTACATGA
TATGATTGTTCCAACCTTATCTTCACATTTGAGATACTTAAAGACATCCT
CTTAGCGGATATAAATCATTGACCATTGTAAGACAAGTATCTTCCGGTTT
TGATATGATATATGGTATGAATCAGATTCCATACTGATTTTTTTTTTATT
CTTGTTCAAATCAATTTCGATGTACAAGTTATTTTCTCTTCAATCTTATA
ATCTATTCATAAGTATTATTAGTTCTAAAGGAGATTGACTATATCAAAGA
GGTAAGGTTTTAAATAGAATAGAACTCAGATTCACATACCTTTAGTTCTT
TAGTTTTGGTTTTTCCTTGTTGCTCACAAACTTCTTTANACTCTGGATCA
AAAAAAGATTTTAAGATCGCGATTTTACCAAAATGAAATCCAGTAACTTT
TCTTCCACTTTGACTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010035TCONS_00010035Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:557565..561081 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.41	0.67	1.11	0.87	0.26	0.21	0.25	1.18	1.32	0.82	1.79	1.31	0.78	0.3	0.33	0.36	116.83	130	1.04	0	5.66	4.44	0.59	0.64	0	0.56	5.64	5.16	2.61	2.44