XLOC_006593 (gene) - C. hemisphaerica

Overview


Name	XLOC_006593
Unique Name	XLOC_006593
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000132:339647..347928+

gene from alignment at sc0000132:339647..347928+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_006593 ID=XLOC_006593|Name=XLOC_006593|organism=Clytia hemisphaerica|type=gene|length=8282bp|location=Sequence derived from alignment at sc0000132:339647..347928+ (Clytia hemisphaerica)
CTGACTATTAACTGGCCTGGGGCATCACATAGGAAGGGATCCCTCATAGG
AAGGACGTTAGGAAGGCAGCTTCCATCCTCAACCTGCTTTAAATTCACCT
TCACTGAAAGACTGATACAGAGCTCCACTCTAAGCCTCAGGGAAGAAACA
TTAAACTTGatttctggattttttttaaaaggtatCTATTTNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGAAGACCCCCCCCT
TAACTGGCaacccccccttaggaaagtcatacttttaacaccccccTTTT
GGTTCATCAATATCCAAGACCCCCCTGAATGTaagacgaccctcgacatg
gcccgagaattcttgggccaaaacttttattggatttcgcgtaaagcccg
agtatggcccgagctggcccgagaattcgggccgNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatattaaat
gtcttatttggtatgaaaacatagttataaatatacttagggtggaaata
tttgctagtaaactggtcctggttttaaactgaagcgtgtccatgggaag
ctcgtaaagttcttttgagcgatataaacaaaacagacaaatcttatttt
gtactattttgtttgactggacatgctgaatcaatttaacatttgaatga
ctcgggtcatgttcgggccaaaagaattgatagggtatctcggcccgaac
atggcccgaagaggcccgagaattctcgggccatgtcgagggtcgtaatG
TAagggggggtagaaactatgtcaaaacttttaaaaacttaagaataaat
taatgcTTCATCATAAGTATAAGGCTGTTGTTTTCTTCACTTTAGCTTGT
TCTTTGTTATGGAGCTGAAACAGTTGCTCCTCATCCTGACCACTCTTTGC
CTTTTGATGTCACTTGCAGGTATATCATTTTTATCAATCATTTgagcaac
ctcgttccctgcccattatcagcttttttatgcttactggtagcgctaga
taataccctggcattgtctgGTTTTCAAACGCGTAAGATTAtgtaattaa
aaaacaaaacatcaaatttcattttgttcTTCGGTTTTGAAGCCATTGCA
CtgcagtgtaactttgtaacatcagattttttatgacgtattgttatGAG
AAGTACCCCCTCTGAGAGGgtaactcgcatcagccaacaccagagtattc
tctggcgtcaatcagtcgtaacgtaaataaagcctggagtACACGGGTAC
GAGGTTGTCATTTGAGtattttattcaaaacaaaagctGCATCTTTCAAT
AGAATTTGTGCTCCCAAGTAATTTTAAGTTTGGAAGTGTCTTGTAGCGAT
TAGACATGCCTTGGTTGGCTCTTtccaacaaaaaaatgtttcaatgttTT
CATTATGATGTATGTTAAAACAGCCAGCAAAAATGGTAATGGCCGttcaa
aatcagattttttATGGCTTGAAGGCAAAACCTTGCcatagaaatttgaa
atttgattgatgCTAGACTTCTTTTAAAATACTGAACCAAATTCTCTACT
Gaagttgtgtataaaattgtaaacaaatagataaacttttttgctcagtt
tctTTTCTACACTGTcccaaatttttcaagaaagttaaattttttcCGAA
ATAATACCCTGAAATTTTCCATGAATGAAATTGAAGTTGAGCTATTGTTG
GTGGTGATGATGCTTAAAGTTCTAGAATTCCACTTCCGTAGCTTTGTATA
AAAATTAAGAGTTCTTTAAGATAATAATCATTCAAGAGTTCTCATATGTA
TTCTAGATTATGTTATTGTTTCTCTCAGATTGTCACTTACAATTATGCAG
AGGAGAAGTAGAACATACTTTTCCAAAAACTGAATCCACCCACAGAAaga
taattttcagaaaatcatcAGATTTCATTTCAAATGTGTTTTCATATGCA
ACCATCAACATCACTTCGAACTCCAAATTTGCCATCAACAGGTTCCTCGT
CGTTTGTAACCTTTTTTCCAACAGTCTTGTTCAAAATtcatttataatca
atagaAGATCGTAATCGGCGTATGAATATCATAAgcttttgtttatttca
tttttcaataccATATAGCTGAAAGTATTTACAATAATGTGTTTTAGTTA
CTCACTAATTCATtccattatattttttttaatcttaagGAGCAACAAGA
GTTCAGGCTATTTATCACTTCTGATGTCAAATCATGATGCATCTAACAAT
TATGTCAAAGACAAGCTGTcttgttttgaagattttaacaTTACGTTGAC
TCTAGATGAACCTTCGTCCATCAAGTTCATTGTTTTACCCAAACGTAGGT
TGCTAATTAAGACTATCGTTTCTTTGAACTGGAGGCTCATCCTTTTTCTA
GTTAAGACATTAAGACATGACAATAATCCATTGACAGTGCAGAACTTGAT
TTGCAGAACAAATCATGTCTTAGTGGATCCTGCGGATGTATGAGCTTCAC
TGCTTACTTTCATTAGCTTTCTTTTAGGcgttttaattttaaaataataa
attatctTTCTTCTCTAGGATTTGACCAAATCAGTTTTCTTATCTTTCTC
TTTGGTTGCTTTCTTTTTGTCAATGCAAAATCACTCAGTCGGTAAGTCTG
CTTATAATTTTATATTAATAGCTGTGGTCCACTTAAAGAATATTTTGAtc
ttttaaaagattattttgaattttagctttCTCTACAAATGTAATTTTAT
CTGATCACTACTTTTGTTTGGATTGATACAATGATAGAGCCTGATTTANT
AGCTGTGGTCCACTTAAAGAATATTTTGATCTTCTAaaagattattttga
attttagctttCTCTACAAATGTAATTTTATCTGATCACTACTTTTGTTT
GGATTGATAGAGCCTGATTTAATTCAGCCtatgttttgaaattaaagGTC
TATCTATATTTTGCACGTCcctttgtttttccttttttttcttcttttgt
taatagacgatatcagctttccgaattctccccgaataaTTACCCATGAC
tgcccatgatgcattgcgcaaaaaaattcacggacaatattgacttactg
aatttttttgcgcaatgcatcatgggtaatcattcggggaaAATTTCGTT
AacccgatatcgtctattacatGTTCTCGAATACAATTAACGACCTCATT
TGATTAAAATGACATTCGCATTCTTTTCAAAGTGaaataatatctttttt
tggccCATTTTATAGAACAGAAGaaatctaaaataaaacaaaaatcataa
cattAACAGTTTGTTACAGCAACAATATTCAAAAGACGCTACAAATTCTT
TTTCCAGGAGCATGACATTTCTCTATGCATCTTGTGCTTCGGTTGGTGTT
CTGGCTTCCTGTCTCATCCTGCTCTTCATCTGCTACAGATTAGTCCCATA
CAAGGTAAATCCAAAACTCCCTATATCTTTTGTGAGTGATCTTAACCCCT
TTTTGGAAAtaagaaacttttgtgaatatTAAAAACAGTGTTCAGTTGGT
ATTAATGAAGTGAAATCGATTGCGATTTTTAGGTCTGACTTAATTTTGTC
TACAGAATAGTTACAAATATTTTGTTAAAAGATTTTTCGACTTCCCCTTT
TTCTGGTGCACGTACAGCACAGGGGtttaattttccttttcttcCTCCTC
CAAAACTTAGTTTACCTTTTCTTTGACACAGCGAATGATGGCATTCTTGA
TGACAGTTGGTTCAGGGATGTGGTTGTATTTTTTGGAACATTTCCAATAT
ATTCTTGGCTCGTTCATCATGGAGCACCCATATCATGTGACCGCATATCT
TTTCACTAGCGGTAATGTATTCTCACTTTCACTTGTGAGCAAAGAAAATT
AACTTATTATAAACATAACAGGCCCTTTAAAGGGGGACTAAACAATTTTT
TGAGGTCATCCTTTTTTGTCATCAAGTACTACATAATATTATAGTATAgc
ttccaaaaaatatcactttcactctagtctacacaatagacagctccagg
ctttttgGCCttacacaaagaaatacagccacTTTAAGACCAACTACTGT
CAGCTCTATTgtgatttttgacgtcaaatcttgtcttgatcgtactgacg
tcggtatgtttttgaacttcaagcgggtgtatttctttgtgtgttttagt
cagagagttgttgtaatacatttttttgctcagaatttcatgctctatca
gatAGTACCAATCATTTTGGTATGATTTTGGCAATCATTTTACCAATCAA
AGCTTGAGTCTGATGTATTTCCTGTTACTATTTAAGCCAAGTCCTTTCCC
TTACATGAATCATTGAagagtttatttatttatttttcagcaTTACTGTC
CATTGCTTTATTGTATTACTATGGTGTCCCTTCAAATGAAAGAGCATTGA
ATCTGCTGCAGTGGTCGATGCAGTTGATTGCTGTGTACCTCATCTACTTC
AGCTCTTACAGTAAAGCTTTCTCTATCACTGTGGTTGTCATCCTCACGAT
TTTCCAAGTCATCAGTTTCGTTGCGATTGTATCTGGACTGGTGAAGTTTT
GGTGAGCTAATAGCGGGAATTCTCCACATTAGGGATACCAGTTTGTTTTG
TTGATTGATATGTCggtgtttcatttttttgttcatgTAACTGCATCACA
TTGACTCTAAAACGAAGTAtgatgaagtttgatttgtCATTCTACAATTT
GTTTATAATTAAAAAGCATCGTTCTTTCCTTCTAACTAGCAAGCATAAAA
TACATTGGCACCAAACTTGGGCATTTCTAGTTTTGTAGAGTGTTGGCGTA
GCTGATTTTATAGAGTGTATATCAAATGTTTCTCCCTCTAATTGAAATAT
GAAGGTTAAAAGCAATGACAATATCATTTGATGCCTAATTCATCTTAGCG
TTCCAAAAAAATACACCTACCTCATGCAGCCAGCACCCAAACATCGTTTC
TTATCCATGGAGGAGTACGAACGACAGTGCAAGGAAACCACCGAACGAGA
GCTGAAAGAGTTGAAAGAATATTGTGAAAGTCCTAAGTGCAATTCATGGA
AAGTCGTCTCAAGACTAAAGGATCCGAAAAGGTGATATTGCTGTACAGTC
aatagagtctccataactcgaatatgCACAGGGACTTTGGAGTTATAaga
ttcgagttatggaggctcTATTGTGGTTAAGAACATTATTTAACCAAAAA
GAttgattttcattaatttttgtaaTCAAGTTTTAAACTCATTTCGGTAC
TAGCTCAAGTTCAACAGACCAACACTTATATGGTTGTTGTAAAGATAATT
TGTCACATTAACCTAATTGTTTGTATAACCTAACTTTCTTTGATAGGTTT
GCAAGTTTTCTAGAAAGTGGTGATCAATTTACGAACGAAGAAAAAGACGA
TTATTATATCGATCAAGATAACGAGGACGAGGAGGAAGAAGAAACCTTGC
AAAGAGATTCCTCTTTCAAGAAAAGACATATGACAACTGTCTCTACTTCC
GATGATAGTATCGAACTAGAACATTATATGAACGGGCACACCCTGAATCA
AAGAGAATGGATTTCAGATGATGAGAGGAATGAAAGCTTTTTATCTTAGA
AGGAGTCTTTTGGAAGAAGAGTTTTTATCTCCGAAAGATTAGCGCTTTTC
ATTCAATAAGCGCCTacatctaaaattaaaaaaagaaattaacgaGTACA
GctaaaataagaagaaatacTGTAGcaaagatatttttaaagaaggctTT
CAATTATTATTCTAAAGTAAAGTAACATAGACACATACTGTATACGAACG
ATTGATTCTCATCAGCAAGTTGCAAATGTTTGTGTAAATATATTCTTCCA
ACTGTCTTTTCTTATTAGTAAATGAGCCTCAATCACCTGATTGTTATAAA
CATTCCTTAACAAAACAGTGACTTGAAATCACGACGcgtaaaaagtagaa
aataggtaACAAATTTATGTAAATATTTATATACGATTATTCTAGCTTcg
gtttttaaaagttttattcttAATATTTATAAGGATCATTTTAAATATTA
CTTGCGATGACTAGCATAATTTGTCAAGTTCATGGTACTTATAACCCTGA
ATAATTCTGCACTTAGTCGAAGTCACAACAAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00011730	TCONS_00011730	Clytia hemisphaerica	transcript
TCONS_00011731	TCONS_00011731	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00011730-protein	TCONS_00011730-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000132	supercontig	sc0000132:339647..347928 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.79	9.97	20.62	21.46	14.29	11.06	9.35	10.98	8.96	9.04	8.52	8.6	6.37	6.38	8.99	10.18	10.53	10.77	4.62	6.43	8.49	9.19	19.25	18.57	13.21	12.88	12.8	11.17	14.13	14.27

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XLOC_006593 (gene) - C. hemisphaerica