XLOC_007391 (gene) - C. hemisphaerica

Overview
NameXLOC_007391
Unique NameXLOC_007391
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000163:438273..447103+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007391 ID=XLOC_007391|Name=XLOC_007391|organism=Clytia hemisphaerica|type=gene|length=8831bp|location=Sequence derived from alignment at sc0000163:438273..447103+ (Clytia hemisphaerica)
ttcaggacaatagaaggattccacatgccaaatatcccaaaccatctgat tatccctttaacgaTTTTACTTATTTTTCAGCTGTTTATAGAGAGGAGTC tcctgaaaaagtaaaaatataacaaataacTGAAAGAATAATGGAATGAA AATCCGCAACTGCAGTCAAGTCTTAATTCACTGGATAAACTAaataatca aaaacataatGGCCGATACATATTTCACACGTgagattgatttttcaaaa ggtGACGTCATTATTCACCAATCATATATCGGAGATGTGGGTCACGTGGT ATGGGATGCTGCAATCGTATTGGCTAAATTTCTTgatggaaaatatttta ccaGTAACGAGACATTAACATTGCAAGGGAAGAGTGTTGTGGAATTGGGA TCTGGGACTGGTTTAGTCGGATTGGTTGCCGCGATGAACGGGTAATTTGT Ctcttttaagggctctgaccatagtcaaaaaattgattttggtatttgag cataaaagttatgtttcaggttcctttacacttttagcaaagaattgcct ttacaaatttataatttctacatgacaaatatcaaaattcactatggtca gagcccttaagtctgCTTAAAGATGTagattttcttatatttttatgATG TCTGAAATATGAACTATATCTGTTACTTTATTTTAATTCCCTATTCCTTC ACTTTTGGCATCATTTATTTAATAGGTATTAAGATTATTAAATGGACCTT TTTGGCCCTTCTCTAATCCATTTACTGATTATAAAATCTCTAAACTAGAG AATTAGAATGCCCAATGATGTAAACTGACGAAATGAGCAATGTTTGTTTT AGCAATCGTTTTACTTCACTTTCCCTTCCACTTTTCTCTCTATTCTTTAC GCAAGTTGTTATCGTTACCAATTTCTTTCCCATCTNcgctccattattcg ataatattgaaagtcaccgtcaataagaaactctcataaacgataCTTTA CTATTacatacgctcccttattcgatgaatgtccaatttcccttgaaaat ccaactagagagcgtcaactgtattagCCTGTCAGCTCtacattttcctt tgtttctttTCATACTTAGAGCGTCCGTCCGAATAACTGATTTAAATGAA CTTGTACCATTGATGGAAAAGAACATTGAAGCCAATCAGCATTTATTACA AGGAAACGCCAaggctgaaagtttgaaatggtatgttttatttaatttct ttGCCTTGTCCAAATGCcttgtacacgctttttttataagaaccagtaaa tctTGACTaaggctgggctgttcttaattttttgaaatttccaggcTTAT ATATTCTAAAGATCTTTTTAAaacgcttagtttctttacttataaACTTA AAATGGGTTTAAAGTCAGTATTTTGACTAAGTAATTTCTGCAATCTGAGG CTTGCATCGTCCtgaatttgttcttaggttttgcccaattttcagcctcg tgttcttaaaatgaaataaaatgatgaaaaaaaattaaattattcttata aaaacaagcatGTATTGGTTAATTTCGGGAGCCTACATCCACTGTTAAGG AGGTCCCAAACCTTTTTGTGAGCTACCCTTTGTACTACTCAACTAAAAAT CATGTAACACCAGAGGAATTTCAGGTGATTTTTGGGTTATCTCTCTGGAG TTTATTATTGCGTGCCTGTTTTCgaacaattcatgatatgcaccactgga gagtcttcctACATTTTTCGAAATATTCAACCCAATATGtcacttttttt attgtttaagtgatgtattgggttgaatattttgaaaattctcggaagac tccagtggtgcatatcatgaattaattcCCTTGCAATGAACCTTCTACAC GGGCTTAATCTGTAATCTTCTGagattcttacaaaaaatacttGTTGTAC AAGAGACTCGTATTTTATTTGTAGGGGTGTGGATCTTGAGATGAAAATGA AAGCAGATATCATTTTGATTGCTGATTGTATCTATTATGATGAGGTATAA TAAGATCATGTTCGCAGGTAACCGTTTGCCTTCGAAACAAAAGAAGCGAA CGAAACcgtagcgtgtgaacgtggtctTAAGTctcaatcgcactttttcg agcaaagcttccacgctattggtcaaaacaaaaatgaagcaactccattg gcgcgatctgacgtaacggttgaaaaaagttgaaatgtgttcaacttttt tttcaagcgcgcgctacatttttatgacgtaatcttttttccaagcaaaa aggattgaagccaaaaagtgcgatcgcagcgcgcgtaAGTGGAGACCGAC CTTAACACTTCTTTGACACCACTTTCCACAACGTTGTCTATTGTGTAAAT ACAGTATGTACATGGGTAATtttttccaacggtgtatagcTTTATAATGG TAGCATGAGTATATGCtgagaaattgttaaaaagataccttatcggggaa aacttcgtcggggaaaagtgacgaaattttggacaagtgacgaatatttt ccccgacgaaaattttccccggccttaatgtgtttaccaactaccagcaa gtgacgaatttttcaccgacgaagttttccccgacgaagttttccccgat aaggtaaagggttgagctctagtttagacggcccacttttcgccctgcct attatAATTGtgaataaaccagccgaggctggaaagTCAGCCAATATAGC TAGATTATTAGTTGGATAGCTTGTAAAGAAGTTAAGTAGCTGCGATGGAA GGAAGGACTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT TAAGCTAGTCACatactccagaaaaacacaatttgcctCAAAAACTTTGC GAAAAGTAGTTCAGTCTCTATAAAATTTCAACAGAAACTGTATTTTAGTA GGGTAGGTTACCCTTTTATGGACACCCTCTATTATGGACAAACCCTTCTG AAAGATTACAGTACACGTAGTGTTCATATTATATATCATgataatttgta taaaaattttatttttttatttttgatataaaataagcaaaaaagtaaaa atcaaacagaaaatgtcgagaaaaaaaattgacattatAAACTTTAAAAT AATGGACTTGTGGATCTGTATTGTCTTTTAACAGCATCAAAGTAACTTAT TTGACTAATGATTGGTGATGAAATTATGGTAAAATAGTGTTTCAAGTGGG CGGGTCCACCCATTCTCTAACATGGATGTTTGTTACCTATTATGAACAGG TGGGTGTttccaaccaaaaaagcccaaaacATGCGCCAAGGTCacaaaac acaatctgcgtccagAGATGTgtgaacaataaaaaaataatatgtgaTGG TCGTCATTTTATCCAGTGTTCTGGCGGCAATCAAATACATGTTTCGTTTG TGTCAAAAATCTTCATAAAATAGAGTCAgtcagtcggtcggtagtaaatc tAGTCaggtttttaggaaaatggtttcaaagtttagtttttaatatttat tcgcTCGCTTGATGAAAAATTCTGACAATTTTCTGACTCCTCCAGCATTT TTGTCTACCAAGTTGGTTGGATTGGTTGGCCGACGCAAACAGCCGGcgcg aacagaacatatttttgattatcTCCCTCTGCTGTTGTTGTAGCCAAACA CGCCAGTGCAGTATGGATTCCACAAAATCTCGCGtcgaagatatttttcc gtacagcaagcctcacgccaagcaatatttcttttgtaccaacattcaat ttttaataagggtgcaagatgggaaaagaggcgcatgcgccaacataatt aataaTTGACGCAAGCGTAAGCGAgcaaaagcaaatttagccaaaatgaa agctaaaaatcaatgaattattggagtcattcacgccgagctggaattat tactttacaccAACTGAAAaccaaacaatctttgtaagtacccttaaaCC AATGCgtcaaaaacgtttcagttNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNgatgaaaatcatgtgtttgatttgccaagtttcaaagtcattat aaaaaagatatgacagaaattgaagcttgcaacatgCATTTTACTTCCTG CATTTACACTGACACTGAAAACACTGAGCCGCTTGAtctgccatcttgaa acacAACATCTAAAACaacacacgctaaaagtacactaaaagttaacccg atcggatataaactttagaaatcggggaaacacggCTTACGTAATGAGCA TATCGGGGTAAcatgtttttttcgattttggtcTGATGATGATGGGGAAA AGCCTATTTGAATAATCAGCTGTTGGCTGACTAATTAAAGTGGGCAAAta gttggctgtctaaagtaaatgcattgccctcttttgacgtcaatgcaatg tcttctttcaatcttttccaagcaaagattttaactgccaactttgtgcc cacttttAGCCTACtcaaacaattagaataggcagggcataaagtcggcc gtctaaactagagctgacatacttttgagacagaccTTGATATATTCCTC GCTGATCAACATTCATCTTTTCCTTTGGTTTCCAGTCTTTAGAGCCTTTG GTCAACACAATGCATTCACTGTGTCATGAAACTACAGTCATCTACATGTC TTATGAAGAACGGAACACTGACCTCAAAATCGAATTGGAAAAGAAGTTCT TTAaggtttgttcattttttttatcgCTTTGAAATTTTAGGATGACCATT TGCCGTAACGCACAAGACCATATTAAGTGTGTCaagaatcaaaataaatt ttctcgTCAGTAAACACTAAAAGACGGGCGCATAGGCTCTAAATTATGGA TAAAGTTATTTCCGTGGTGTTACTTAGAATGGAGATCTAATTGTGCCTGT TACTCAAACTCTCAGGTTGACGGTGAGGCTTTGCAAAGGTTACAAACAGA AAAGTCCATGCTTTGTACTGAATTTCTTACTCTGTGGAACATCTTTTGCT AGCATCAATGCAAAACCTATTAGATTAGAGCTCCACAATATCTGACACGC GACACGCCTGCTTGACCGTGCtttagatttagaacgccaagTACCCCTCT TTAAAATACCAGTCGATACATCTAATTGGCTGTTACACACTGACCTCTAT TATGGATTTTATTGATTATAATTTAAGGATATTCCTCTCGCTGCGGATCA CTTTTTGCCTTTTCTGTAAGGAGTAGGTCTCACCGAGCCTGTAACACGAG GGTGACATGTTACTTCGTATTCATGACATGCATAAGTTAAGATAGTCATA AGTCATTTTCTTGCGTAAACGctcgaaaatgtttgacctctttttggcta ttttagttCAAAACTGGGGGTGTTACCGATGGTAAAATATAGGTCATCTT AACGCATGCTTTGCCAGCTCAAAGAACCAAGCTGACCAAGTTTTTTTACG CCAATCTCattaaaaatcttcagaaaggAATGTGCCTGGACAATAAATAG TAtaattaattttgcttttttgatcTGATatcttttcatgattttttgtt ACTTAAACTCCTATTTTGTTCCTTTAACAATCGAATTTCGGACACAATAA CGTCTGATAATCGGACAGCCTCGACTTTCAAGTCTATTAACCTTTTATAT TCTACcatgtttgatttttctttcttcttcttatTGACTTGATACCAACG TAAAGGACTTTTGGTTGTCATTTCAAATTCATACTGTGTGATTTTCCATT CTGCCCTTTGAAAAATGTCCAATAAGTTTTCATTCGCCTGCTCAAGTTGT TCAATGGTTTTCCCCTAAAAGATAATATGAATATAGAATTAGCAAATTAC CGGACAGTTACCGCAGTAAGTAGTATGTATGAaagcgaccgtagcatgaa ggtagaacATTCCGCTACGGTGCACAAGGTTGAGGGTTCGATCCCGAGTT CATACCAAGgattccaaaatggtacttgatgcctctctgatTTATTCTTG GCGACTATagagggtaagtggagaaatccagggaaaagTGGTGCTGCATG ATCATTGGGTAGACAACTAAGGAAAAAAGCTTGCCCTCGACTGAGGTTGC AGACTTACTTTCTATTAAACAAAATCCTTGCGTTCTCACTTATTTCATTT ATTAGATTTGAGGCTTAGCCTAATTTCTGGTCTTACTTGTCCAGAATAAG TTATCGAAGATTGTTCGTGTTGCTATTGAAGTTGACACCCATAAGATGTA CGAAGGGttagaaaaatatattgaaaaggctACATACCAGgttctttttt aatttaagaGTCACATGATCCAACTTTCGTTGTTGAGTTCTATTCTGACG AAAAAGTTTGATCTGTTCTTCATTGaatttgagaaatccatttTCTTGCG ATAATAATGATGATGATACTGTCTTCTTTTTCCTTTCTTCTGGGCGCTTC TAGAAAAGAACGAGATTAAGAcgattaaaaaatttaagaatagtGGTGAT AAGCCCACTTTCAGTGAATTGATTTCTGCGTAGACCTAATTTCGCTAAAA TGACCTAAAAttgcgaaaattaatcaaatGCGAAATTCCGTCCATTTGAG TTTGATTTAGATTTATAGATTTAAATTTCgttagaaaaatgtttttgggc ttGAAAGTATTTTAGTTCGTTCAGAATAATATGATTAtggtttgattttc atttaTTGAGATGATTGTTGAGAACAAGCAAAGTAAATCAGCTTccgatg ttcttagtttttcgaaattttcaggTTCCCTTTTTCTAACAGTCTCTTGA CCTAAGTGACTGAGATTATGTAATTGAAATTTGAGCCTCGGTTTGCACTT AATTCGTTCTTTGCTTTTAGCCAAATCTCAgtcacagatttataaagcct gaagggctagatgtcgtgctttaggCCATCTCAGGCAATAAAAATTGagt atcggaaaaaatattgttgctattgttttcgaaaacctgcgaagcttctg attggtcaagcgctgaaattctattgtaatgtcacgtgacctaggtagga tccTACCTAACCAAGACACACTTttcgacatctagcccttcgggctttat aaatctataatCTCAGCCTCTTACTTTTATTTGTTcttatcccagctggc acacaacgttgtttcaacgttcatctaacgttatatggatgttttgaacg ttaaataaacgttgaaacaacgtcgtgtgccagctgggataaaaaagcgt gtacctggTCAGACGACAATTCAGAGAGTTGTATATTAGTGTTTCTTTTT CGCTTCTTTATATCACGTTTACTTCGAATTTCCAAATATTCATTCTTATA CTCATCACTGAtagtaaaacaattttttacctTCTCATCTCGGACTTGGA TTTCATTCGATATTCTCATAGGGCTTTTAGATACGATCACAGTACGGCGC ATGATTCTTATGGCCTTGCGACGTCGCCGAGGTGGTATAGGTCGAGGACG CTCTTTTTGTTCATCCTCTGAACTCGATTCTGTTAATCTGCGTCTATGGT TTTCGGTGTTTGTATTGTTTTCCGTGCGAGTATTATAAGAACGTCTTTCC TCTCGCATATGCAAGCGGCGACGTCGACGTCGTTGAACAGGTAATTCTTC ACTGTTACTCATGATAGATTTTCTTAAAGATGTGGAGTTCTTGATACTTG GTTGATTTTGTTGATAATTTATAGGAACGAAATGTTATTAGTTTCGAATG GGTTTTAATGGTTTTTTGTTACAGTTTACCATCATGTTTCAAGATTGAGA AGCAACTGAGCACCTTATGATATTTTTCATTGaccaaagtttttgtttga tattttatttgacgtcattttttttTGACGTGGACAATTATATTGATAAC GCGTTGCGGATCCCCCAAATAGACCTCTTTGGAAACTTGAAAAAAACCCT AGAACTGTCACAATCGTTTATTGATGAAAAAAGACCCATGAAAAGTTCCG CTTTAAATTTTCCGCTCAAAATTCTGACAGAACTAAGATACTCATGAACA TTTTTTCCCTCTTATGGCACTTTTTATTTCATTAATCTAATGcttcaaaa tctgaaaaagaaagaaattctgTCAAATTGTCAATAACTTCGGAAACCtc aagaaatttcattttctcaGATAACTTATTTTACAGAATAGCTAGTCAAA GAAGATGACACATTGATTACCTATCTGAAGCTAGTCTGAATAGCgaaatt gtaaaaaaagatAGCATGAATCTGTTAGAGTATACCAGCAGCCTAGCCCG AACCCTTAaagatcaaatcaaaaaaactatttttgccATTTCTCTACAGC TTTTAGACGGACTTTTCTCCACGGAGCGGATATCTCGTGATTTACAAGAC CCTCTCTACAACAGTGACGACATCcatatattgaaaataagtctTTTGAA GAGATGATGAcgatatcgttggaaagattttCGTGAGTACaatatatcat attttcaagtcCTTGGAGAgttcaaacttat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013218TCONS_00013218Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013218-proteinTCONS_00013218-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000163supercontigsc0000163:438273..447103 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
VCPKMTPREDICTED: protein-lysine methyltransferase METTL21D isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.93 4.6 3.31 3.74 3.95 3.33 5.04 6.81 4.77 5.13 3.92 4.13 3.14 2.06 5.24 6.74 6.82 7.14 1.69 2.48 8.54 5.83 6.88 5.69 7.46 8.13 2.72 1.96 4.24 4.04